pycom10g08650

Protein of unknown function (DUF620)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
11417096 .. 11419041
1946 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g08650.3

Sequence Viewer

Length: 960 bp
ATGGAGAAGAAACAAGGCTTCTTCTCTGCTCTCAAGGACGAGGTGGTTCGGGGTCTCAGCCCCTCGCGGTCGCGGGCCAGCAGCCCGGCTCGGTCCGGGTCGCCCATGACGGGTCTGCTCCGGAGGAAGAAGCAGAACCATCACGGAAATGGGCACGGCGTCCAGCTGGTAGGGCAGCCGGACGCGTTGATTGGGAGATCGGGGAGCCTGAGGCCGGTGATGGAGGGTCCGGATCCGGACGGAGGGGAACTTGGGGATTCGAAGCGGGTCGGGTCGGGCTTGGGCCAGTGGATGCGAGGGCAGCTGTCGCGGACTCCCTCCATGAGCTCCGTCGCGCATAACAACAGCAAGAGGTCTGATCTGAGACTGCTGCTTGGAGTCATGGGTGCTCCTCTCGCCCCCCTCCACGTCAGTACCACCGACCCTTTCCCCCATCTCAGTATCAAGGACACTCCCATCGAAACTTCCTCTGCCCAGTACATACTGCAACAGTACACAGCGGCATCTGGTGGGCAGAAGCTGCAGAACTCGATAAAAAATGCTTATGCCATGGGAAAGGTTAGGATGGTTGCTTCTGAGTTTGAAACGGCAACGAAGGTGATGAAGACCAGAAATGCCTCTAGATGTGCCGAGTCAGGTGGGTTTGTGCTCTGGCAGATGAGTCCGGACATGTGGTATGTAGAGCTTGCGGTGGGTGGCAGCAAGGTTCATGCCGGTTGCAATGGGAAGCTTGTTTGGAGGCATACACCGTGGCTTGGTGCTCATACTGCGAAAGGACCAGTGAGACCCTTGCGTCGGGCACTTCAGGGTCTAGATCCAAGATGTACGGCTAGTATGTTTACCGATGCAAGATGTATAGGAGAGAGGAAGATCAATGGTGAGGATTGCTTCATCCTCAAGCTTTGTGCTGATCCTCAGACTCTGAAGGCCAGGAGTGAAGGCCCTGCCGATCGATCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

320

Amino Acids

34.44

Weight (kDa)

9.99

Isoelectric Point (pI)

50.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 792
AccII CGCG 5 cut(s) 67, 73, 185, 310, 335
AccIII TCCGGA 4 cut(s) 120, 229, 235, 664
AciI CCGC 6 cut(s) 67, 73, 265, 310, 500, 689
AclWI GGATC 4 cut(s) 227, 240, 809, 905
AcuI CTGAAG 2 cut(s) 788, 944
AcyI GRCGYC 1 cut(s) 159
AfaI GTAC 4 cut(s) 415, 479, 494, 826
AfiI CCNNNNNNNGG 5 cut(s) 110, 214, 242, 755, 795
AflIII ACRYGT 2 cut(s) 183, 669
AgsI TTSAA 1 cut(s) 584
AjiI CACGTC 1 cut(s) 409
AjnI CCWGG 1 cut(s) 929
AluBI AGCT 7 cut(s) 166, 304, 327, 520, 685, 730, 901
AluI AGCT 7 cut(s) 166, 304, 327, 520, 685, 730, 901
Alw21I GWGCWC 4 cut(s) 329, 391, 651, 763
Alw26I GTCTC 3 cut(s) 59, 358, 778
AlwI GGATC 4 cut(s) 227, 240, 809, 905
AlwNI CAGNNNCTG 2 cut(s) 520, 922
Aor13HI TCCGGA 4 cut(s) 120, 229, 235, 664
AoxI GGCC 5 cut(s) 75, 212, 283, 927, 940
ApeKI GCWGC 6 cut(s) 81, 175, 301, 370, 520, 699
AspLEI GCGC 1 cut(s) 337
AspS9I GGNCC 6 cut(s) 75, 93, 227, 283, 776, 941
AsuC2I CCSGG 2 cut(s) 86, 97
AsuHPI GGTGA 3 cut(s) 229, 610, 890
AsuII TTCGAA 1 cut(s) 260
AvaII GGWCC 3 cut(s) 93, 227, 776
AxyI CCTNAGG 1 cut(s) 209
BaeGI GKGCMC 2 cut(s) 156, 802
BaeI ACNNNNGTAYC 2 cut(s) 397, 430
BamHI GGATCC 1 cut(s) 232
BanII GRGCYC 1 cut(s) 329
BbsI GAAGAC 1 cut(s) 611
Bbv12I GWGCWC 4 cut(s) 329, 391, 651, 763
BbvI GCAGC 6 cut(s) 93, 187, 313, 357, 507, 711
BccI CCATC 5 cut(s) 147, 214, 441, 464, 559
BceAI ACGGC 3 cut(s) 172, 603, 843
BciT130I CCWGG 1 cut(s) 931
BcnI CCSGG 2 cut(s) 86, 97
BcoDI GTCTC 3 cut(s) 59, 358, 778
BfaI CTAG 3 cut(s) 621, 812, 831
BfmI CTRYAG 1 cut(s) 521
BisI GCNGC 7 cut(s) 82, 176, 302, 371, 501, 521, 700
BlsI GCNGC 7 cut(s) 83, 177, 303, 372, 502, 522, 701
Bme1390I CCNGG 3 cut(s) 86, 97, 931
Bme18I GGWCC 3 cut(s) 93, 227, 776
BmgBI CACGTC 1 cut(s) 409
BmgT120I GGNCC 6 cut(s) 75, 93, 227, 283, 776, 941
BmiI GGNNCC 3 cut(s) 206, 228, 234
BmrFI CCNGG 3 cut(s) 86, 97, 931
BmrI ACTGGG 1 cut(s) 469
BmsI GCATC 3 cut(s) 282, 512, 835
BmuI ACTGGG 1 cut(s) 469
BpiI GAAGAC 1 cut(s) 611
Bpu14I TTCGAA 1 cut(s) 260
BpuEI CTTGAG 2 cut(s) 17, 881
BpuMI CCSGG 2 cut(s) 86, 97
Bsa29I ATCGAT 1 cut(s) 952
BsaHI GRCGYC 1 cut(s) 159
BsaI GGTCTC 2 cut(s) 59, 778
BsaJI CCNNGG 2 cut(s) 549, 749
BsaWI WCCGGW 4 cut(s) 120, 229, 235, 664
Bsc4I CCNNNNNNNGG 5 cut(s) 110, 214, 242, 755, 795
Bse118I RCCGGY 2 cut(s) 214, 713
Bse1I ACTGG 3 cut(s) 286, 475, 779
Bse21I CCTNAGG 1 cut(s) 209
Bse3DI GCAATG 1 cut(s) 727
BseAI TCCGGA 4 cut(s) 120, 229, 235, 664
BseBI CCWGG 1 cut(s) 931
BseCI ATCGAT 1 cut(s) 952
BseDI CCNNGG 2 cut(s) 549, 749
BseGI GGATG 3 cut(s) 297, 570, 891
BseLI CCNNNNNNNGG 5 cut(s) 110, 214, 242, 755, 795
BseMI GCAATG 1 cut(s) 727
BseMII CTCAG 6 cut(s) 70, 200, 353, 451, 567, 929
BseNI ACTGG 3 cut(s) 286, 475, 779
BseRI GAGGAG 1 cut(s) 381
BseSI GKGCMC 2 cut(s) 156, 802
BseXI GCAGC 6 cut(s) 93, 187, 313, 357, 507, 711
Bsh1236I CGCG 5 cut(s) 67, 73, 185, 310, 335
Bsh1285I CGRYCG 2 cut(s) 71, 952
BshFI GGCC 5 cut(s) 77, 214, 285, 929, 942
BshVI ATCGAT 1 cut(s) 952
BsiEI CGRYCG 2 cut(s) 71, 952
BsiHKAI GWGCWC 4 cut(s) 329, 391, 651, 763
BsiSI CCGG 9 cut(s) 86, 96, 121, 179, 215, 230, 236, 665, 714
BslI CCNNNNNNNGG 5 cut(s) 110, 214, 242, 755, 795
BsmAI GTCTC 3 cut(s) 59, 358, 778
BsnI GGCC 5 cut(s) 77, 214, 285, 929, 942
Bso31I GGTCTC 2 cut(s) 59, 778
Bsp119I TTCGAA 1 cut(s) 260
Bsp1286I GDGCHC 6 cut(s) 156, 329, 391, 651, 763, 802
Bsp13I TCCGGA 4 cut(s) 120, 229, 235, 664
Bsp143I GATC 8 cut(s) 197, 232, 358, 814, 870, 910, 949, 953
Bsp19I CCATGG 1 cut(s) 549
BspACI CCGC 6 cut(s) 67, 73, 265, 310, 500, 689
BspANI GGCC 5 cut(s) 77, 214, 285, 929, 942
BspCNI CTCAG 6 cut(s) 69, 201, 354, 450, 568, 928
BspDI ATCGAT 1 cut(s) 952
BspEI TCCGGA 4 cut(s) 120, 229, 235, 664
BspFNI CGCG 5 cut(s) 67, 73, 185, 310, 335
BspLI GGNNCC 3 cut(s) 206, 228, 234
BspMAI CTGCAG 1 cut(s) 525
BspPI GGATC 4 cut(s) 227, 240, 809, 905
BspT104I TTCGAA 1 cut(s) 260
BspTNI GGTCTC 2 cut(s) 59, 778
BsrDI GCAATG 1 cut(s) 727
BsrFI RCCGGY 2 cut(s) 214, 713
BsrI ACTGG 3 cut(s) 286, 475, 779
BssAI RCCGGY 2 cut(s) 214, 713
BssECI CCNNGG 2 cut(s) 549, 749
BssMI GATC 8 cut(s) 197, 232, 358, 814, 870, 910, 949, 953
BssNI GRCGYC 1 cut(s) 159
BssT1I CCWWGG 1 cut(s) 549
Bst2UI CCWGG 1 cut(s) 931
Bst4CI ACNGT 2 cut(s) 492, 750
BstACI GRCGYC 1 cut(s) 159
BstAPI GCANNNNNTGC 1 cut(s) 520
BstBI TTCGAA 1 cut(s) 260
BstC8I GCNNGC 3 cut(s) 75, 79, 687
BstDEI CTNAG 6 cut(s) 56, 209, 362, 437, 576, 915
BstDSI CCRYGG 2 cut(s) 549, 749
BstF5I GGATG 3 cut(s) 297, 570, 891
BstFNI CGCG 5 cut(s) 67, 73, 185, 310, 335
BstHHI GCGC 1 cut(s) 337
BstKTI GATC 8 cut(s) 200, 235, 361, 817, 873, 913, 952, 956
BstMAI GTCTC 3 cut(s) 59, 358, 778
BstMBI GATC 8 cut(s) 197, 232, 358, 814, 870, 910, 949, 953
BstMCI CGRYCG 2 cut(s) 71, 952
BstMWI GCNNNNNNNGC 6 cut(s) 172, 301, 307, 395, 520, 767
BstNI CCWGG 1 cut(s) 931
BstNSI RCATGY 1 cut(s) 673
BstSCI CCNGG 3 cut(s) 84, 95, 929
BstSFI CTRYAG 1 cut(s) 521
BstSLI GKGCMC 2 cut(s) 156, 802
BstUI CGCG 5 cut(s) 67, 73, 185, 310, 335
BstV1I GCAGC 6 cut(s) 93, 187, 313, 357, 507, 711
BstV2I GAAGAC 1 cut(s) 611
BstX2I RGATCY 2 cut(s) 232, 814
BstYI RGATCY 2 cut(s) 232, 814
Bsu15I ATCGAT 1 cut(s) 952
Bsu36I CCTNAGG 1 cut(s) 209
BsuRI GGCC 5 cut(s) 77, 214, 285, 929, 942
BsuTUI ATCGAT 1 cut(s) 952
BtgI CCRYGG 2 cut(s) 549, 749
BtrI CACGTC 1 cut(s) 409
BtsCI GGATG 3 cut(s) 297, 570, 891
BtsIMutI CAGTG 2 cut(s) 293, 786
Cac8I GCNNGC 3 cut(s) 75, 79, 687
CaiI CAGNNNCTG 2 cut(s) 520, 922
CfoI GCGC 1 cut(s) 337
Cfr10I RCCGGY 2 cut(s) 214, 713
Cfr13I GGNCC 6 cut(s) 75, 93, 227, 283, 776, 941
ClaI ATCGAT 1 cut(s) 952
CpoI CGGWCCG 1 cut(s) 93
CseI GACGC 3 cut(s) 148, 191, 782
Csp6I GTAC 4 cut(s) 414, 478, 493, 825
CspI CGGWCCG 1 cut(s) 93
CviAII CATG 6 cut(s) 106, 322, 382, 550, 670, 710
CviQI GTAC 4 cut(s) 414, 478, 493, 825
DdeI CTNAG 6 cut(s) 56, 209, 362, 437, 576, 915
DpnI GATC 8 cut(s) 199, 234, 360, 816, 872, 912, 951, 955
DpnII GATC 8 cut(s) 197, 232, 358, 814, 870, 910, 949, 953
DrdI GACNNNNNNGTC 1 cut(s) 792
DseDI GACNNNNNNGTC 1 cut(s) 792
Ecl136II GAGCTC 1 cut(s) 327
Eco130I CCWWGG 1 cut(s) 549
Eco24I GRGCYC 1 cut(s) 329
Eco31I GGTCTC 2 cut(s) 59, 778
Eco47I GGWCC 3 cut(s) 93, 227, 776
Eco53kI GAGCTC 1 cut(s) 327
Eco57I CTGAAG 2 cut(s) 788, 944
Eco81I CCTNAGG 1 cut(s) 209
EcoICRI GAGCTC 1 cut(s) 327
EcoO109I RGGNCCY 1 cut(s) 941
EcoRII CCWGG 1 cut(s) 929
EcoT14I CCWWGG 1 cut(s) 549
EcoT38I GRGCYC 1 cut(s) 329
ErhI CCWWGG 1 cut(s) 549
FaeI CATG 6 cut(s) 109, 325, 385, 553, 673, 713
FatI CATG 6 cut(s) 105, 321, 381, 549, 669, 709
FauI CCCGC 2 cut(s) 66, 258
Fnu4HI GCNGC 7 cut(s) 82, 176, 302, 371, 501, 521, 700
FokI GGATG 3 cut(s) 304, 577, 878
FriOI GRGCYC 1 cut(s) 329
Fsp4HI GCNGC 7 cut(s) 82, 176, 302, 371, 501, 521, 700
FspBI CTAG 3 cut(s) 621, 812, 831
GlaI GCGC 1 cut(s) 336
GluI GCNGC 7 cut(s) 82, 176, 302, 371, 501, 521, 700
HaeIII GGCC 5 cut(s) 77, 214, 285, 929, 942
HapII CCGG 9 cut(s) 86, 96, 121, 179, 215, 230, 236, 665, 714
HgaI GACGC 3 cut(s) 148, 191, 782
HhaI GCGC 1 cut(s) 337
Hin1I GRCGYC 1 cut(s) 159
Hin1II CATG 6 cut(s) 109, 325, 385, 553, 673, 713
Hin6I GCGC 1 cut(s) 335
HinP1I GCGC 1 cut(s) 335
HindIII AAGCTT 2 cut(s) 728, 899
HinfI GANTC 6 cut(s) 257, 313, 378, 632, 661, 919
HpaII CCGG 9 cut(s) 86, 96, 121, 179, 215, 230, 236, 665, 714
HphI GGTGA 3 cut(s) 229, 610, 890
Hpy166II GTNNAC 2 cut(s) 495, 840
Hpy188I TCNGA 5 cut(s) 358, 363, 577, 918, 924
Hpy188III TCNNGA 6 cut(s) 121, 230, 236, 621, 665, 812
Hpy8I GTNNAC 2 cut(s) 495, 840
Hpy99I CGWCG 2 cut(s) 335, 798
HpyAV CCTTC 3 cut(s) 589, 919, 932
HpyCH4III ACNGT 2 cut(s) 492, 750
HpyCH4IV ACGT 1 cut(s) 408
HpyCH4V TGCA 4 cut(s) 487, 523, 720, 848
HpyF10VI GCNNNNNNNGC 6 cut(s) 172, 301, 307, 395, 520, 767
HpyF3I CTNAG 6 cut(s) 56, 209, 362, 437, 576, 915
HpySE526I ACGT 1 cut(s) 408
Hsp92I GRCGYC 1 cut(s) 159
Hsp92II CATG 6 cut(s) 109, 325, 385, 553, 673, 713
HspAI GCGC 1 cut(s) 335
Kpn2I TCCGGA 4 cut(s) 120, 229, 235, 664
Kzo9I GATC 8 cut(s) 197, 232, 358, 814, 870, 910, 949, 953
LmnI GCTCC 4 cut(s) 123, 204, 332, 394
Lsp1109I GCAGC 6 cut(s) 93, 187, 313, 357, 507, 711
LweI GCATC 3 cut(s) 282, 512, 835
MaeI CTAG 3 cut(s) 621, 812, 831
MaeII ACGT 1 cut(s) 408
MalI GATC 8 cut(s) 199, 234, 360, 816, 872, 912, 951, 955
MboI GATC 8 cut(s) 197, 232, 358, 814, 870, 910, 949, 953
MboII GAAGA 5 cut(s) 13, 19, 139, 616, 880
MflI RGATCY 2 cut(s) 232, 814
MhlI GDGCHC 6 cut(s) 156, 329, 391, 651, 763, 802
MluI ACGCGT 1 cut(s) 183
MlyI GAGTC 5 cut(s) 307, 387, 641, 670, 913
MroI TCCGGA 4 cut(s) 120, 229, 235, 664
MslI CAYNNNNRTG 1 cut(s) 147
MspA1I CMGCKG 3 cut(s) 166, 304, 500
MspI CCGG 9 cut(s) 86, 96, 121, 179, 215, 230, 236, 665, 714
MspR9I CCNGG 3 cut(s) 86, 97, 931
MvaI CCWGG 1 cut(s) 931
MvnI CGCG 5 cut(s) 67, 73, 185, 310, 335
MwoI GCNNNNNNNGC 6 cut(s) 172, 301, 307, 395, 520, 767
NciI CCSGG 2 cut(s) 86, 97
NcoI CCATGG 1 cut(s) 549
NdeII GATC 8 cut(s) 197, 232, 358, 814, 870, 910, 949, 953
NlaIII CATG 6 cut(s) 109, 325, 385, 553, 673, 713
NlaIV GGNNCC 3 cut(s) 206, 228, 234
NmeAIII GCCGAG 1 cut(s) 655
NspI RCATGY 1 cut(s) 673
NspV TTCGAA 1 cut(s) 260
PciI ACATGT 1 cut(s) 669
PfeI GAWTC 1 cut(s) 257
PkrI GCNGC 7 cut(s) 83, 177, 303, 372, 502, 522, 701
Ple19I CGATCG 1 cut(s) 952
PleI GAGTC 5 cut(s) 307, 386, 640, 669, 913
PpsI GAGTC 5 cut(s) 307, 386, 640, 669, 913
PscI ACATGT 1 cut(s) 669
Psp124BI GAGCTC 1 cut(s) 329
Psp6I CCWGG 1 cut(s) 929
PspGI CCWGG 1 cut(s) 929
PspN4I GGNNCC 3 cut(s) 206, 228, 234
PspPI GGNCC 6 cut(s) 75, 93, 227, 283, 776, 941
PstI CTGCAG 1 cut(s) 525
PstNI CAGNNNCTG 2 cut(s) 520, 922
PsuI RGATCY 2 cut(s) 232, 814
PvuI CGATCG 1 cut(s) 952
PvuII CAGCTG 2 cut(s) 166, 304
RsaI GTAC 4 cut(s) 415, 479, 494, 826
RsaNI GTAC 4 cut(s) 414, 478, 493, 825
RseI CAYNNNNRTG 1 cut(s) 147
Rsr2I CGGWCCG 1 cut(s) 93
RsrII CGGWCCG 1 cut(s) 93
SacI GAGCTC 1 cut(s) 329
SatI GCNGC 7 cut(s) 82, 176, 302, 371, 501, 521, 700
Sau3AI GATC 8 cut(s) 197, 232, 358, 814, 870, 910, 949, 953
Sau96I GGNCC 6 cut(s) 75, 93, 227, 283, 776, 941
SchI GAGTC 5 cut(s) 307, 387, 641, 670, 913
ScrFI CCNGG 3 cut(s) 86, 97, 931
SduI GDGCHC 6 cut(s) 156, 329, 391, 651, 763, 802
SfaNI GCATC 3 cut(s) 282, 512, 835
SfcI CTRYAG 1 cut(s) 521
SfuI TTCGAA 1 cut(s) 260
SinI GGWCC 3 cut(s) 93, 227, 776
SmiMI CAYNNNNRTG 1 cut(s) 147
SmlI CTYRAG 2 cut(s) 32, 896
SmoI CTYRAG 2 cut(s) 32, 896
SsiI CCGC 6 cut(s) 67, 73, 265, 310, 500, 689
SspMI CTAG 3 cut(s) 621, 812, 831
SstI GAGCTC 1 cut(s) 329
StyD4I CCNGG 3 cut(s) 84, 95, 929
StyI CCWWGG 1 cut(s) 549
TaaI ACNGT 2 cut(s) 492, 750
TaiI ACGT 1 cut(s) 411
TaqI TCGA 4 cut(s) 260, 459, 530, 952
TaqII GACCGA 1 cut(s) 81
TatI WGTACW 2 cut(s) 477, 492
TauI GCSGC 1 cut(s) 503
TfiI GAWTC 1 cut(s) 257
TscAI CASTG 2 cut(s) 293, 786
TseI GCWGC 6 cut(s) 81, 175, 301, 370, 520, 699
TspDTI ATGAA 3 cut(s) 617, 698, 880
TspGWI ACGGA 3 cut(s) 159, 255, 319
TspRI CASTG 2 cut(s) 293, 786
VpaK11BI GGWCC 3 cut(s) 93, 227, 776
XbaI TCTAGA 2 cut(s) 620, 811
XceI RCATGY 1 cut(s) 673
XcmI CCANNNNNNNNNTGG 1 cut(s) 146
XspI CTAG 3 cut(s) 621, 812, 831
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.