pycom15g06890

Protein of unknown function (DUF620)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
4213551 .. 4215824
2274 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g06890.3

Sequence Viewer

Length: 1407 bp
ATGGAGAGAAAGCAGGGTTTTTTTTCGGCTTTGAAGGAGGAGGTGACGAGGGGGCTGTCGCCGGGGAGGTCGAGGGCGAAAAGTCCGGCCAGGAGTGGGTCCCCAATGTCGGGGCTGCTCAGGCGGCGGAGGAATCATCACGTGGCGCAGCCGGAGCCGTTGATGATTCTGAGATCCGGGAACTTGAGGCCCGCCGAGGCGCTGTCGCCGCTGAAGGAAGGGCCGGATGGGACGGACGGTGGAGATTCGAGGATGGAGGGGAAGTGGGGCCACTGGATGAAGGGGCAGCTGTGCAGGACGCCTTCGGTTTCGTGCTCCACCTACAAAAGGTCGGATCTGCGGCTGTTGCTTGGGGTTCTGGGTGCGCCGCTCGCCCCGGTGCACGTTAGCACCACTGAGCCTCTGCCTCACCTTAGCATCAAAGACACACCCATTGAGACTTCATCTGCTCAGTATATATTGCAGCAGTTTACAGCAGCATCAGGAGGGCAGAAGCTTCAGAACTCAATCCACAATGCTTATGCTATGGGAAAGGTGAGAATGATCGCCTCGGAGTTTGAAACGGCCAACAGGGTTGTACGGAACAAGAATTCCTCCAAAGCAGCAGAGTCGGGTGGTTTTGTCCTGTGGCAGATGCATCCAGACATGTGGTATGTGGAGCTTGCACTTGGCGGCAGCAAGGTTCATGCTGGTTGCAATGGAAAGCTTGTGTGGAGGCACACGCCTTGGCTTGGTGCACATGCTGCAAAAGGGCCTGTCAGACCCTTGCGACGGGCACTTCAGGGGCTTGACCCACGAACCACTGCTAGTATGTTTACCAGCTCAAGATGCATTGGTGAAAAGAAGATAAATGGCGAGGATTGTTTCATCCTCAAGCTTTCTGCAGATCCTTTGACGCTGAAAGCCAGGAGCGAAGGGCCTGCGGAGATCATTAGGCATGTTTTATTTGGCTACTTCAGCCAGAAAACAGGGCTCCTTGTACACTTGGAAGATTCCCATTTGACCCGCATTCAGAACAATGGAGGTGATGCTGTTTACTGGGAGACCACAATCAACTCATTCCTCGATGATTACAAGCCTGTTGAGGGGATTATGATCGCTCACTCGGGACGTTCAGTAGTAACCCTATTCAGGTTTGGAGAAACTGCAATGAGCCACACCAAGACGAGGATGGAAGAAGCTTGGACAGTTGAGGAAGTGGCATTCAATGTCCCTGGCTTGTCAATGGACTGTTTCATCCCTCCTGCTGAGCTAAGATTTGCTACTATGAGTGAAGCCTGTGAGCTCCCTCAGGGTCAGACTGTAAATAACACTGCGGGAGCAGCTGCATATCGGGCGAAAGTTGCATCATTCGAGAAGTCTCATGGAGGCAATGCAAGTAATCTTATGTGGAAGATGGATGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

469

Amino Acids

51.37

Weight (kDa)

9.42

Isoelectric Point (pI)

51.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 370
AclWI GGATC 3 cut(s) 168, 342, 881
AcoI YGGCCR 2 cut(s) 87, 564
AcsI RAATTY 1 cut(s) 589
AcuI CTGAAG 4 cut(s) 233, 482, 764, 940
AcvI CACGTG 1 cut(s) 142
AcyI GRCGYC 1 cut(s) 299
AfaI GTAC 2 cut(s) 579, 981
AfiI CCNNNNNNNGG 9 cut(s) 96, 109, 110, 327, 731, 771, 1085, 1131, 1167
AflIII ACRYGT 1 cut(s) 645
AgsI TTSAA 3 cut(s) 34, 560, 1207
AjnI CCWGG 3 cut(s) 89, 905, 1213
AloI GAACNNNNNNTCC 2 cut(s) 575, 607
Alw21I GWGCWC 4 cut(s) 317, 384, 739, 1287
Alw26I GTCTC 3 cut(s) 431, 1037, 1365
Alw44I GTGCAC 2 cut(s) 380, 735
AlwI GGATC 3 cut(s) 168, 342, 881
Ama87I CYCGRG 1 cut(s) 1105
AoxI GGCC 7 cut(s) 87, 188, 221, 268, 564, 752, 917
ApaLI GTGCAC 2 cut(s) 380, 735
ApoI RAATTY 1 cut(s) 589
AspLEI GCGC 3 cut(s) 148, 202, 367
AspS9I GGNCC 6 cut(s) 99, 189, 221, 268, 752, 917
AsuC2I CCSGG 3 cut(s) 63, 178, 377
AsuHPI GGTGA 5 cut(s) 55, 401, 547, 848, 1037
AvaI CYCGRG 1 cut(s) 1105
AvaII GGWCC 1 cut(s) 99
AxyI CCTNAGG 1 cut(s) 1290
BaeGI GKGCMC 3 cut(s) 384, 739, 778
BanII GRGCYC 2 cut(s) 975, 1287
BbrPI CACGTG 1 cut(s) 142
Bbv12I GWGCWC 4 cut(s) 317, 384, 739, 1287
BccI CCATC 4 cut(s) 221, 247, 1165, 1390
BceAI ACGGC 2 cut(s) 142, 579
BcgI CGANNNNNNTGC 4 cut(s) 591, 625, 902, 936
BciT130I CCWGG 3 cut(s) 91, 907, 1215
BcnI CCSGG 3 cut(s) 63, 178, 377
BcoDI GTCTC 3 cut(s) 431, 1037, 1365
BfaI CTAG 1 cut(s) 807
BfmI CTRYAG 1 cut(s) 882
BfoI RGCGCY 1 cut(s) 203
BlpI GCTNAGC 1 cut(s) 1248
Bme1390I CCNGG 6 cut(s) 63, 91, 178, 377, 907, 1215
Bme18I GGWCC 1 cut(s) 99
BmeT110I CYCGRG 1 cut(s) 1105
BmgT120I GGNCC 6 cut(s) 99, 189, 221, 268, 752, 917
BmiI GGNNCC 5 cut(s) 100, 101, 156, 269, 974
BmrFI CCNGG 6 cut(s) 63, 91, 178, 377, 907, 1215
BmrI ACTGGG 1 cut(s) 1048
BmsI GCATC 7 cut(s) 426, 488, 624, 646, 818, 1018, 1355
BmuI ACTGGG 1 cut(s) 1048
Bpu10I CCTNAGC 2 cut(s) 119, 413
Bpu1102I GCTNAGC 1 cut(s) 1248
BpuEI CTTGAG 3 cut(s) 205, 808, 857
BpuMI CCSGG 3 cut(s) 63, 178, 377
BsaAI YACGTR 1 cut(s) 142
BsaBI GATNNNNATC 1 cut(s) 1094
BsaHI GRCGYC 1 cut(s) 299
BsaI GGTCTC 1 cut(s) 1037
BsaJI CCNNGG 6 cut(s) 62, 195, 375, 549, 725, 1213
BsaXI ACNNNNNCTCC 2 cut(s) 248, 278
Bsc4I CCNNNNNNNGG 9 cut(s) 96, 109, 110, 327, 731, 771, 1085, 1131, 1167
Bse1I ACTGG 2 cut(s) 278, 1043
Bse21I CCTNAGG 1 cut(s) 1290
Bse3DI GCAATG 3 cut(s) 703, 1155, 1378
Bse8I GATNNNNATC 1 cut(s) 1094
BseBI CCWGG 3 cut(s) 91, 907, 1215
BseDI CCNNGG 6 cut(s) 62, 195, 375, 549, 725, 1213
BseGI GGATG 8 cut(s) 232, 258, 282, 637, 867, 1176, 1236, 1405
BseJI GATNNNNATC 1 cut(s) 1094
BseLI CCNNNNNNNGG 9 cut(s) 96, 109, 110, 327, 731, 771, 1085, 1131, 1167
BseMI GCAATG 3 cut(s) 703, 1155, 1378
BseMII CTCAG 6 cut(s) 133, 161, 387, 464, 1239, 1304
BseNI ACTGG 2 cut(s) 278, 1043
BseRI GAGGAG 1 cut(s) 53
BseSI GKGCMC 3 cut(s) 384, 739, 778
BsgI GTGCAG 1 cut(s) 313
BshFI GGCC 7 cut(s) 89, 190, 223, 270, 566, 754, 919
BsiHKAI GWGCWC 4 cut(s) 317, 384, 739, 1287
BsiHKCI CYCGRG 1 cut(s) 1105
BsiSI CCGG 6 cut(s) 62, 86, 152, 177, 224, 377
BslFI GGGAC 4 cut(s) 85, 244, 1122, 1196
BslI CCNNNNNNNGG 9 cut(s) 96, 109, 110, 327, 731, 771, 1085, 1131, 1167
BsmAI GTCTC 3 cut(s) 431, 1037, 1365
BsmFI GGGAC 4 cut(s) 85, 244, 1122, 1196
BsmI GAATGC 2 cut(s) 1008, 1202
BsnI GGCC 7 cut(s) 89, 190, 223, 270, 566, 754, 919
Bso31I GGTCTC 1 cut(s) 1037
BsoBI CYCGRG 1 cut(s) 1105
Bsp1286I GDGCHC 6 cut(s) 317, 384, 739, 778, 975, 1287
Bsp1407I TGTACA 1 cut(s) 979
Bsp143I GATC 6 cut(s) 173, 334, 543, 886, 927, 1095
Bsp1720I GCTNAGC 1 cut(s) 1248
BspANI GGCC 7 cut(s) 89, 190, 223, 270, 566, 754, 919
BspCNI CTCAG 6 cut(s) 132, 162, 388, 463, 1240, 1303
BspLI GGNNCC 5 cut(s) 100, 101, 156, 269, 974
BspMAI CTGCAG 1 cut(s) 886
BspPI GGATC 3 cut(s) 168, 342, 881
BspTNI GGTCTC 1 cut(s) 1037
BsrBI CCGCTC 1 cut(s) 370
BsrDI GCAATG 3 cut(s) 703, 1155, 1378
BsrGI TGTACA 1 cut(s) 979
BsrI ACTGG 2 cut(s) 278, 1043
BssECI CCNNGG 6 cut(s) 62, 195, 375, 549, 725, 1213
BssMI GATC 6 cut(s) 173, 334, 543, 886, 927, 1095
BssNI GRCGYC 1 cut(s) 299
BssT1I CCWWGG 1 cut(s) 725
Bst2UI CCWGG 3 cut(s) 91, 907, 1215
Bst4CI ACNGT 4 cut(s) 239, 1189, 1232, 1303
BstACI GRCGYC 1 cut(s) 299
BstAPI GCANNNNNTGC 1 cut(s) 743
BstAUI TGTACA 1 cut(s) 979
BstBAI YACGTR 1 cut(s) 142
BstC8I GCNNGC 4 cut(s) 192, 372, 663, 921
BstDEI CTNAG 8 cut(s) 119, 170, 396, 413, 450, 1248, 1253, 1290
BstENI CCTNNNNNAGG 1 cut(s) 325
BstF5I GGATG 8 cut(s) 232, 258, 282, 637, 867, 1176, 1236, 1405
BstH2I RGCGCY 1 cut(s) 203
BstHHI GCGC 3 cut(s) 148, 202, 367
BstKTI GATC 6 cut(s) 176, 337, 546, 889, 930, 1098
BstMAI GTCTC 3 cut(s) 431, 1037, 1365
BstMBI GATC 6 cut(s) 173, 334, 543, 886, 927, 1095
BstNI CCWGG 3 cut(s) 91, 907, 1215
BstNSI RCATGY 3 cut(s) 649, 743, 941
BstSCI CCNGG 6 cut(s) 61, 89, 176, 375, 905, 1213
BstSFI CTRYAG 1 cut(s) 882
BstSLI GKGCMC 3 cut(s) 384, 739, 778
BstX2I RGATCY 3 cut(s) 173, 334, 886
BstXI CCANNNNNNTGG 1 cut(s) 648
BstYI RGATCY 3 cut(s) 173, 334, 886
Bsu36I CCTNAGG 1 cut(s) 1290
BsuRI GGCC 7 cut(s) 89, 190, 223, 270, 566, 754, 919
BtsCI GGATG 8 cut(s) 232, 258, 282, 637, 867, 1176, 1236, 1405
BtsI GCAGTG 2 cut(s) 801, 1311
BtsIMutI CAGTG 4 cut(s) 271, 393, 801, 1311
Cac8I GCNNGC 4 cut(s) 192, 372, 663, 921
CfoI GCGC 3 cut(s) 148, 202, 367
Cfr13I GGNCC 6 cut(s) 99, 189, 221, 268, 752, 917
CseI GACGC 2 cut(s) 307, 904
Csp6I GTAC 2 cut(s) 578, 980
CviAII CATG 5 cut(s) 646, 686, 740, 938, 1364
CviQI GTAC 2 cut(s) 578, 980
DdeI CTNAG 8 cut(s) 119, 170, 396, 413, 450, 1248, 1253, 1290
DpnI GATC 6 cut(s) 175, 336, 545, 888, 929, 1097
DpnII GATC 6 cut(s) 173, 334, 543, 886, 927, 1095
EaeI YGGCCR 2 cut(s) 87, 564
EciI GGCGGA 1 cut(s) 142
Ecl136II GAGCTC 1 cut(s) 1285
Eco130I CCWWGG 1 cut(s) 725
Eco24I GRGCYC 2 cut(s) 975, 1287
Eco31I GGTCTC 1 cut(s) 1037
Eco47I GGWCC 1 cut(s) 99
Eco53kI GAGCTC 1 cut(s) 1285
Eco57I CTGAAG 4 cut(s) 233, 482, 764, 940
Eco72I CACGTG 1 cut(s) 142
Eco81I CCTNAGG 1 cut(s) 1290
Eco88I CYCGRG 1 cut(s) 1105
EcoICRI GAGCTC 1 cut(s) 1285
EcoNI CCTNNNNNAGG 1 cut(s) 325
EcoO109I RGGNCCY 3 cut(s) 99, 752, 917
EcoRI GAATTC 1 cut(s) 589
EcoRII CCWGG 3 cut(s) 89, 905, 1213
EcoT14I CCWWGG 1 cut(s) 725
EcoT22I ATGCAT 2 cut(s) 639, 833
EcoT38I GRGCYC 2 cut(s) 975, 1287
ErhI CCWWGG 1 cut(s) 725
FaeI CATG 5 cut(s) 649, 689, 743, 941, 1367
FaqI GGGAC 4 cut(s) 85, 244, 1122, 1196
FatI CATG 5 cut(s) 645, 685, 739, 937, 1363
FauI CCCGC 3 cut(s) 199, 1013, 1309
FokI GGATG 7 cut(s) 239, 265, 289, 624, 854, 1183, 1223
FriOI GRGCYC 2 cut(s) 975, 1287
FspBI CTAG 1 cut(s) 807
GlaI GCGC 3 cut(s) 147, 201, 366
HaeII RGCGCY 1 cut(s) 203
HaeIII GGCC 7 cut(s) 89, 190, 223, 270, 566, 754, 919
HapII CCGG 6 cut(s) 62, 86, 152, 177, 224, 377
HgaI GACGC 2 cut(s) 307, 904
HhaI GCGC 3 cut(s) 148, 202, 367
Hin1I GRCGYC 1 cut(s) 299
Hin1II CATG 5 cut(s) 649, 689, 743, 941, 1367
Hin6I GCGC 3 cut(s) 146, 200, 365
HinP1I GCGC 3 cut(s) 146, 200, 365
HindIII AAGCTT 4 cut(s) 494, 704, 875, 1179
HinfI GANTC 5 cut(s) 133, 166, 245, 608, 992
HpaII CCGG 6 cut(s) 62, 86, 152, 177, 224, 377
HphI GGTGA 5 cut(s) 55, 401, 547, 848, 1037
Hpy166II GTNNAC 6 cut(s) 382, 471, 737, 816, 982, 1036
Hpy188I TCNGA 7 cut(s) 171, 334, 501, 553, 761, 1014, 1299
Hpy188III TCNNGA 5 cut(s) 483, 641, 825, 1107, 1354
Hpy8I GTNNAC 6 cut(s) 382, 471, 737, 816, 982, 1036
Hpy99I CGWCG 1 cut(s) 774
HpyAV CCTTC 6 cut(s) 28, 208, 212, 274, 312, 908
HpyCH4III ACNGT 4 cut(s) 239, 1189, 1232, 1303
HpyCH4IV ACGT 3 cut(s) 141, 384, 1111
HpyF3I CTNAG 8 cut(s) 119, 170, 396, 413, 450, 1248, 1253, 1290
HpySE526I ACGT 3 cut(s) 141, 384, 1111
Hsp92I GRCGYC 1 cut(s) 299
Hsp92II CATG 5 cut(s) 649, 689, 743, 941, 1367
HspAI GCGC 3 cut(s) 146, 200, 365
KflI GGGWCCC 1 cut(s) 99
Kzo9I GATC 6 cut(s) 173, 334, 543, 886, 927, 1095
LmnI GCTCC 7 cut(s) 154, 320, 658, 909, 978, 1290, 1319
LweI GCATC 7 cut(s) 426, 488, 624, 646, 818, 1018, 1355
MaeI CTAG 1 cut(s) 807
MaeII ACGT 3 cut(s) 141, 384, 1111
MaeIII GTNAC 2 cut(s) 43, 1120
MalI GATC 6 cut(s) 175, 336, 545, 888, 929, 1097
MbiI CCGCTC 1 cut(s) 370
MboI GATC 6 cut(s) 173, 334, 543, 886, 927, 1095
MboII GAAGA 4 cut(s) 856, 1001, 1187, 1405
MflI RGATCY 3 cut(s) 173, 334, 886
MhlI GDGCHC 6 cut(s) 317, 384, 739, 778, 975, 1287
MluCI AATT 1 cut(s) 589
MlyI GAGTC 1 cut(s) 617
MmeI TCCRAC 1 cut(s) 312
Mph1103I ATGCAT 2 cut(s) 639, 833
MspA1I CMGCKG 3 cut(s) 211, 289, 1325
MspI CCGG 6 cut(s) 62, 86, 152, 177, 224, 377
MspR9I CCNGG 6 cut(s) 63, 91, 178, 377, 907, 1215
Mva1269I GAATGC 2 cut(s) 1008, 1202
MvaI CCWGG 3 cut(s) 91, 907, 1215
NciI CCSGG 3 cut(s) 63, 178, 377
NdeII GATC 6 cut(s) 173, 334, 543, 886, 927, 1095
NlaIII CATG 5 cut(s) 649, 689, 743, 941, 1367
NlaIV GGNNCC 5 cut(s) 100, 101, 156, 269, 974
NmeAIII GCCGAG 1 cut(s) 220
NmuCI GTSAC 1 cut(s) 43
NsiI ATGCAT 2 cut(s) 639, 833
NspI RCATGY 3 cut(s) 649, 743, 941
PciI ACATGT 1 cut(s) 645
PctI GAATGC 2 cut(s) 1008, 1202
PfeI GAWTC 4 cut(s) 133, 166, 245, 992
PfoI TCCNGGA 1 cut(s) 176
PleI GAGTC 1 cut(s) 616
PmaCI CACGTG 1 cut(s) 142
PmlI CACGTG 1 cut(s) 142
PpsI GAGTC 1 cut(s) 616
Ppu21I YACGTR 1 cut(s) 142
PpuMI RGGWCCY 1 cut(s) 99
PscI ACATGT 1 cut(s) 645
Psp124BI GAGCTC 1 cut(s) 1287
Psp5II RGGWCCY 1 cut(s) 99
Psp6I CCWGG 3 cut(s) 89, 905, 1213
PspCI CACGTG 1 cut(s) 142
PspGI CCWGG 3 cut(s) 89, 905, 1213
PspN4I GGNNCC 5 cut(s) 100, 101, 156, 269, 974
PspPI GGNCC 6 cut(s) 99, 189, 221, 268, 752, 917
PspPPI RGGWCCY 1 cut(s) 99
PstI CTGCAG 1 cut(s) 886
PsuI RGATCY 3 cut(s) 173, 334, 886
PvuII CAGCTG 2 cut(s) 289, 1325
RsaI GTAC 2 cut(s) 579, 981
RsaNI GTAC 2 cut(s) 578, 980
SacI GAGCTC 1 cut(s) 1287
Sau3AI GATC 6 cut(s) 173, 334, 543, 886, 927, 1095
Sau96I GGNCC 6 cut(s) 99, 189, 221, 268, 752, 917
SchI GAGTC 1 cut(s) 617
ScrFI CCNGG 6 cut(s) 63, 91, 178, 377, 907, 1215
SduI GDGCHC 6 cut(s) 317, 384, 739, 778, 975, 1287
SfaNI GCATC 7 cut(s) 426, 488, 624, 646, 818, 1018, 1355
SfcI CTRYAG 1 cut(s) 882
SinI GGWCC 1 cut(s) 99
SmlI CTYRAG 3 cut(s) 184, 823, 872
SmoI CTYRAG 3 cut(s) 184, 823, 872
Sse9I AATT 1 cut(s) 589
SspMI CTAG 1 cut(s) 807
SstI GAGCTC 1 cut(s) 1287
StyD4I CCNGG 6 cut(s) 61, 89, 176, 375, 905, 1213
StyI CCWWGG 1 cut(s) 725
TaaI ACNGT 4 cut(s) 239, 1189, 1232, 1303
TaiI ACGT 3 cut(s) 144, 387, 1114
TaqI TCGA 4 cut(s) 71, 248, 1065, 1353
TasI AATT 1 cut(s) 589
TatI WGTACW 1 cut(s) 979
TauI GCSGC 5 cut(s) 127, 211, 343, 370, 675
TfiI GAWTC 4 cut(s) 133, 166, 245, 992
TscAI CASTG 4 cut(s) 278, 400, 808, 1318
TseFI GTSAC 1 cut(s) 43
Tsp45I GTSAC 1 cut(s) 43
TspDTI ATGAA 5 cut(s) 293, 432, 674, 856, 1225
TspGWI ACGGA 2 cut(s) 248, 595
TspRI CASTG 4 cut(s) 278, 400, 808, 1318
VneI GTGCAC 2 cut(s) 380, 735
VpaK11BI GGWCC 1 cut(s) 99
XagI CCTNNNNNAGG 1 cut(s) 325
XapI RAATTY 1 cut(s) 589
XceI RCATGY 3 cut(s) 649, 743, 941
XcmI CCANNNNNNNNNTGG 1 cut(s) 1168
XspI CTAG 1 cut(s) 807
Zsp2I ATGCAT 2 cut(s) 639, 833
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.