Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0002066

Physical Location & Seq

Genomic Coordinates Forward (+)

17355659 .. 17360530

Gene Structure 4872 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G168000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1194 bp

ATGTTATCAGAGTTGATGAACTTCTTGAGGTCCTGTTTTCGGCCGAGGTCGAATCGATATGTTCATACCGGTGCAGATTCGGGGGGTCGTCAAGACGGGCTGCTGTGGTACAAAGACACAGGCCAGCACATAAATGGTGATTTTTCAATGGCTGTAGTTCAGGCCAATAATTTACTTGAGGATCAGAGTCAGCTTGAGTCGGGCAGTTTGAGCACGCAGGAATCTGGCCCCTATGGTACTTTTATTGGTGTTTATGACGGGCATGGTGGACCAGAGACATCACGCTATATCAATGAACACCTCTTTCAGCATCTGAAGAGATTTAGTTCGGAGCAGCAGTCCATGTCTGTGGATGTAATACGAAAAGCATTTCAAGCAACAGAAGAGGGTTTTCTTTCCGTAGTTACCAGGCAGTGGCCTATGAAACCGCAGATTGCAGCAGTAGGGTCATGCTGCCTTGTTGGTGTTATATGTGGTGGAACTCTTTATATTGCTAACCTTGGTGATTCCCGTGCTGTTTTGGGGAGAGTTGTGAAGGCAACAGGGGAAGTGCTCTCTATTCAGTTGTCACAAGAGCACAATGCATGTATAGAATCTGTGAGACAGGAGCTGCAGTCTTTGCACCCTGATGATCCACATATTGTAGTTTTGAAGCATAATGTATGGCGTGTAAAGGGCCTAATACAGATTTCTAGATCTATTGGCGATGTGTATTTAAAAAAGGCTGAATTTAACAGGGAGCCTTTGTATTCCAAGTTTCGTCTTCGGGACCCTATCAAAAGACCGATACTGAGCGCTGATCCTGCAATTTCAGCGATCCAATTGCAGCCGCATGATCAGTTTATCATCTTTGCATCCGATGGGCTCTGGGAACACCTCAGCAATCAGGAAGCAGTGGACATAGTTCAAAATCATCCACGAAGTGGAAGTGCAAAGAGGCTGGTGAAAACTGCCCTGCAAGAAGCAGCAAAAAAGAGAGAAATGAGGTATTCAGACCTGAAGAAGATTGACCGTGGGGTTCGCCGCCATTTCCATGATGACATAACCGTGATCGTTGTGTTTCTTGACTCAAACCTTGTGAGCAAGGCTACTTCGGGCAAGTGCCCAAATATATCAGTGAGAGGGGGTGGAATCAACCTGCCTCCTAATTCTCTGGCTCCTTATGCTACAGCGACGGAAGCTGGCAATACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PP2C

Protein Analysis

398

Amino Acids

44.05

Weight (kDa)

8.64

Isoelectric Point (pI)

48.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002066)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51370 AT3G51370 AT3G51370 AT4G38520 AT4G38520 AT5G66080 AT5G66080
fragaria_vesca	FvH4_1g11150 FvH4_1g11150 FvH4_2g15570 FvH4_2g15570 FvH4_2g15570
malus_domestica	MD02G1124100.v1.1 MD05G1124200.v1.1 MD10G1127000.v1.1 MD15G1238100.v1.1
prunus_persica	Prupe.7G174300_v2.0.a1 Prupe.7G174300_v2.0.a1 Prupe.8G168000_v2.0.a1
pyrus_communis	pycom02g09700 pycom05g11820 pycom10g10880 pycom15g21180
rosa_chinensis	RchiOBHm_Chr2g0098431 RchiOBHm_Chr6g0278751
rosa_laevigata	RLG00000013196 RLG00000016799
rosa_multiflora	Rmu_sc0011772.1_g000003 Rmu_sc0040240.1_g000001 Rmu_ssc0000196.1_g000019
rosa_roxburghii	Rroxscaffold_2G00143970 Rroxscaffold_7G00189660 Rroxscaffold_7G00189930
rosa_rugosa	Rorug02G0073200 Rorug02G0073200 Rorug06G0118500 Rorug06G0118600
rosa_samantha	Rh2CG124900 Rh2DG125000 Rh6BG233000 Rh6CG235200 Rh6DG226700
rosa_wichuraiana	Rw2G009430 Rw6G019950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1146
AccB7I	CCANNNNNTGG	2 cut(s)	414, 923
AciI	CCGC	3 cut(s)	428, 830, 1024
AclWI	GGATC	4 cut(s)	189, 626, 794, 811
AcoI	YGGCCR	1 cut(s)	41
AcsI	RAATTY	1 cut(s)	728
AcuI	CTGAAG	2 cut(s)	335, 1019
AdeI	CACNNNGTG	1 cut(s)	923
AfaI	GTAC	2 cut(s)	110, 238
AfeI	AGCGCT	1 cut(s)	796
AfiI	CCNNNNNNNGG	3 cut(s)	39, 414, 923
AgeI	ACCGGT	1 cut(s)	68
AgsI	TTSAA	4 cut(s)	147, 374, 652, 908
AjnI	CCWGG	1 cut(s)	407
AluBI	AGCT	3 cut(s)	193, 610, 1181
AluI	AGCT	3 cut(s)	193, 610, 1181
Alw21I	GWGCWC	3 cut(s)	215, 555, 579
Alw26I	GTCTC	2 cut(s)	269, 595
AlwI	GGATC	4 cut(s)	189, 626, 794, 811
AlwNI	CAGNNNCTG	2 cut(s)	313, 610
Aor51HI	AGCGCT	1 cut(s)	796
AoxI	GGCC	6 cut(s)	41, 121, 162, 226, 416, 676
ApeKI	GCWGC	7 cut(s)	100, 334, 437, 453, 610, 826, 965
ApoI	RAATTY	1 cut(s)	728
AsiGI	ACCGGT	1 cut(s)	68
AspLEI	GCGC	1 cut(s)	797
AspS9I	GGNCC	5 cut(s)	30, 227, 269, 676, 769
AsuHPI	GGTGA	3 cut(s)	149, 515, 955
AvaII	GGWCC	3 cut(s)	30, 269, 769
BaeGI	GKGCMC	1 cut(s)	1106
BanII	GRGCYC	1 cut(s)	867
BbsI	GAAGAC	1 cut(s)	755
Bbv12I	GWGCWC	3 cut(s)	215, 555, 579
BbvCI	CCTCAGC	1 cut(s)	878
BbvI	GCAGC	7 cut(s)	87, 346, 440, 449, 597, 838, 977
BccI	CCATC	1 cut(s)	854
BcgI	CGANNNNNNTGC	2 cut(s)	805, 839
BciT130I	CCWGG	1 cut(s)	409
BclI	TGATCA	1 cut(s)	835
BcoDI	GTCTC	2 cut(s)	269, 595
BfaI	CTAG	1 cut(s)	693
BfmI	CTRYAG	3 cut(s)	153, 611, 1167
BfoI	RGCGCY	1 cut(s)	798
BfuAI	ACCTGC	1 cut(s)	1146
BglII	AGATCT	1 cut(s)	695
BisI	GCNGC	9 cut(s)	101, 335, 438, 454, 611, 827, 830, 966, 1024
BlsI	GCNGC	9 cut(s)	102, 336, 439, 455, 612, 828, 831, 967, 1025
Bme1390I	CCNGG	1 cut(s)	409
Bme18I	GGWCC	3 cut(s)	30, 269, 769
BmgT120I	GGNCC	5 cut(s)	30, 227, 269, 676, 769
BmiI	GGNNCC	5 cut(s)	229, 741, 770, 771, 1158
BmrFI	CCNGG	1 cut(s)	409
BmsI	GCATC	2 cut(s)	319, 863
BpiI	GAAGAC	1 cut(s)	755
Bpu10I	CCTNAGC	1 cut(s)	878
BpuEI	CTTGAG	3 cut(s)	46, 197, 215
Bsa29I	ATCGAT	1 cut(s)	55
BsaJI	CCNNGG	3 cut(s)	44, 499, 1012
BsaWI	WCCGGW	1 cut(s)	68
BsaXI	ACNNNNNCTCC	6 cut(s)	323, 353, 599, 629, 731, 761
Bsc4I	CCNNNNNNNGG	3 cut(s)	39, 414, 923
Bse118I	RCCGGY	1 cut(s)	68
BseBI	CCWGG	1 cut(s)	409
BseCI	ATCGAT	1 cut(s)	55
BseDI	CCNNGG	3 cut(s)	44, 499, 1012
BseGI	GGATG	3 cut(s)	358, 854, 913
BseLI	CCNNNNNNNGG	3 cut(s)	39, 414, 923
BseMII	CTCAG	2 cut(s)	782, 892
BseSI	GKGCMC	1 cut(s)	1106
BseX3I	CGGCCG	1 cut(s)	41
BseXI	GCAGC	7 cut(s)	87, 346, 440, 449, 597, 838, 977
BsgI	GTGCAG	1 cut(s)	93
Bsh1285I	CGRYCG	1 cut(s)	44
BshFI	GGCC	6 cut(s)	43, 123, 164, 228, 418, 678
BshTI	ACCGGT	1 cut(s)	68
BshVI	ATCGAT	1 cut(s)	55
BsiEI	CGRYCG	1 cut(s)	44
BsiHKAI	GWGCWC	3 cut(s)	215, 555, 579
BsiSI	CCGG	1 cut(s)	69
BslFI	GGGAC	1 cut(s)	782
BslI	CCNNNNNNNGG	3 cut(s)	39, 414, 923
BsmAI	GTCTC	2 cut(s)	269, 595
BsmFI	GGGAC	1 cut(s)	782
BsnI	GGCC	6 cut(s)	43, 123, 164, 228, 418, 678
Bsp1286I	GDGCHC	5 cut(s)	215, 555, 579, 867, 1106
Bsp143I	GATC	7 cut(s)	181, 631, 695, 799, 816, 835, 1050
BspACI	CCGC	3 cut(s)	428, 830, 1024
BspANI	GGCC	6 cut(s)	43, 123, 164, 228, 418, 678
BspCNI	CTCAG	2 cut(s)	783, 891
BspDI	ATCGAT	1 cut(s)	55
BspLI	GGNNCC	5 cut(s)	229, 741, 770, 771, 1158
BspMAI	CTGCAG	1 cut(s)	615
BspMI	ACCTGC	1 cut(s)	1146
BspPI	GGATC	4 cut(s)	189, 626, 794, 811
BsrFI	RCCGGY	1 cut(s)	68
BssAI	RCCGGY	1 cut(s)	68
BssECI	CCNNGG	3 cut(s)	44, 499, 1012
BssMI	GATC	7 cut(s)	181, 631, 695, 799, 816, 835, 1050
BssT1I	CCWWGG	1 cut(s)	499
Bst2UI	CCWGG	1 cut(s)	409
Bst4CI	ACNGT	2 cut(s)	1013, 1048
Bst6I	CTCTTC	2 cut(s)	311, 378
BstAPI	GCANNNNNTGC	1 cut(s)	619
BstC8I	GCNNGC	3 cut(s)	125, 215, 1183
BstDEI	CTNAG	2 cut(s)	791, 878
BstDSI	CCRYGG	1 cut(s)	1012
BstF5I	GGATG	3 cut(s)	358, 854, 913
BstH2I	RGCGCY	1 cut(s)	798
BstHHI	GCGC	1 cut(s)	797
BstKTI	GATC	7 cut(s)	184, 634, 698, 802, 819, 838, 1053
BstMAI	GTCTC	2 cut(s)	269, 595
BstMBI	GATC	7 cut(s)	181, 631, 695, 799, 816, 835, 1050
BstMCI	CGRYCG	1 cut(s)	44
BstMWI	GCNNNNNNNGC	7 cut(s)	210, 374, 619, 803, 812, 1163, 1178
BstNI	CCWGG	1 cut(s)	409
BstNSI	RCATGY	1 cut(s)	588
BstSCI	CCNGG	1 cut(s)	407
BstSFI	CTRYAG	3 cut(s)	153, 611, 1167
BstSLI	GKGCMC	1 cut(s)	1106
BstV1I	GCAGC	7 cut(s)	87, 346, 440, 449, 597, 838, 977
BstV2I	GAAGAC	1 cut(s)	755
BstX2I	RGATCY	1 cut(s)	695
BstXI	CCANNNNNNTGG	1 cut(s)	349
BstYI	RGATCY	1 cut(s)	695
BstZI	CGGCCG	1 cut(s)	41
Bsu15I	ATCGAT	1 cut(s)	55
BsuRI	GGCC	6 cut(s)	43, 123, 164, 228, 418, 678
BsuTUI	ATCGAT	1 cut(s)	55
BtgI	CCRYGG	1 cut(s)	1012
BtgZI	GCGATG	1 cut(s)	720
BtsCI	GGATG	3 cut(s)	358, 854, 913
BtsI	GCAGTG	2 cut(s)	419, 900
BtsIMutI	CAGTG	3 cut(s)	419, 900, 1122
BveI	ACCTGC	1 cut(s)	1146
Cac8I	GCNNGC	3 cut(s)	125, 215, 1183
CaiI	CAGNNNCTG	2 cut(s)	313, 610
CfoI	GCGC	1 cut(s)	797
Cfr10I	RCCGGY	1 cut(s)	68
Cfr13I	GGNCC	5 cut(s)	30, 227, 269, 676, 769
ClaI	ATCGAT	1 cut(s)	55
Csp6I	GTAC	2 cut(s)	109, 237
CspAI	ACCGGT	1 cut(s)	68
CviAII	CATG	6 cut(s)	263, 343, 450, 585, 833, 1034
CviQI	GTAC	2 cut(s)	109, 237
DdeI	CTNAG	2 cut(s)	791, 878
DpnI	GATC	7 cut(s)	183, 633, 697, 801, 818, 837, 1052
DpnII	GATC	7 cut(s)	181, 631, 695, 799, 816, 835, 1050
DraI	TTTAAA	1 cut(s)	717
DraIII	CACNNNGTG	1 cut(s)	923
EaeI	YGGCCR	1 cut(s)	41
EagI	CGGCCG	1 cut(s)	41
Eam1104I	CTCTTC	2 cut(s)	311, 378
EarI	CTCTTC	2 cut(s)	311, 378
EclXI	CGGCCG	1 cut(s)	41
Eco130I	CCWWGG	1 cut(s)	499
Eco24I	GRGCYC	1 cut(s)	867
Eco47I	GGWCC	3 cut(s)	30, 269, 769
Eco47III	AGCGCT	1 cut(s)	796
Eco52I	CGGCCG	1 cut(s)	41
Eco57I	CTGAAG	2 cut(s)	335, 1019
EcoO109I	RGGNCCY	3 cut(s)	30, 676, 769
EcoRII	CCWGG	1 cut(s)	407
EcoT14I	CCWWGG	1 cut(s)	499
EcoT22I	ATGCAT	1 cut(s)	586
EcoT38I	GRGCYC	1 cut(s)	867
ErhI	CCWWGG	1 cut(s)	499
FaeI	CATG	6 cut(s)	266, 346, 453, 588, 836, 1037
FaqI	GGGAC	1 cut(s)	782
FatI	CATG	6 cut(s)	262, 342, 449, 584, 832, 1033
FbaI	TGATCA	1 cut(s)	835
Fnu4HI	GCNGC	9 cut(s)	101, 335, 438, 454, 611, 827, 830, 966, 1024
FokI	GGATG	3 cut(s)	365, 841, 900
FriOI	GRGCYC	1 cut(s)	867
Fsp4HI	GCNGC	9 cut(s)	101, 335, 438, 454, 611, 827, 830, 966, 1024
FspBI	CTAG	1 cut(s)	693
GlaI	GCGC	1 cut(s)	796
GluI	GCNGC	9 cut(s)	101, 335, 438, 454, 611, 827, 830, 966, 1024
HaeII	RGCGCY	1 cut(s)	798
HaeIII	GGCC	6 cut(s)	43, 123, 164, 228, 418, 678
HapII	CCGG	1 cut(s)	69
HhaI	GCGC	1 cut(s)	797
Hin1II	CATG	6 cut(s)	266, 346, 453, 588, 836, 1037
Hin6I	GCGC	1 cut(s)	795
HinP1I	GCGC	1 cut(s)	795
HinfI	GANTC	9 cut(s)	52, 77, 187, 197, 221, 506, 593, 1067, 1131
HpaII	CCGG	1 cut(s)	69
HphI	GGTGA	3 cut(s)	149, 515, 955
Hpy166II	GTNNAC	2 cut(s)	269, 898
Hpy188I	TCNGA	6 cut(s)	10, 186, 315, 331, 859, 994
Hpy188III	TCNNGA	6 cut(s)	25, 92, 693, 767, 887, 1064
Hpy8I	GTNNAC	2 cut(s)	269, 898
Hpy99I	CGWCG	1 cut(s)	1177
HpyAV	CCTTC	1 cut(s)	529
HpyCH4III	ACNGT	2 cut(s)	1013, 1048
HpyF10VI	GCNNNNNNNGC	7 cut(s)	210, 374, 619, 803, 812, 1163, 1178
HpyF3I	CTNAG	2 cut(s)	791, 878
Hsp92II	CATG	6 cut(s)	266, 346, 453, 588, 836, 1037
HspAI	GCGC	1 cut(s)	795
KflI	GGGWCCC	1 cut(s)	769
Ksp22I	TGATCA	1 cut(s)	835
Kzo9I	GATC	7 cut(s)	181, 631, 695, 799, 816, 835, 1050
LmnI	GCTCC	4 cut(s)	331, 607, 739, 1162
Lsp1109I	GCAGC	7 cut(s)	87, 346, 440, 449, 597, 838, 977
LweI	GCATC	2 cut(s)	319, 863
MaeI	CTAG	1 cut(s)	693
MaeIII	GTNAC	2 cut(s)	403, 567
MalI	GATC	7 cut(s)	183, 633, 697, 801, 818, 837, 1052
MboI	GATC	7 cut(s)	181, 631, 695, 799, 816, 835, 1050
MboII	GAAGA	5 cut(s)	328, 395, 755, 1012, 1015
MfeI	CAATTG	1 cut(s)	821
MflI	RGATCY	1 cut(s)	695
MhlI	GDGCHC	5 cut(s)	215, 555, 579, 867, 1106
MluCI	AATT	5 cut(s)	169, 728, 807, 821, 1147
MlyI	GAGTC	3 cut(s)	196, 206, 1061
Mph1103I	ATGCAT	1 cut(s)	586
MseI	TTAA	2 cut(s)	716, 732
MslI	CAYNNNNRTG	6 cut(s)	69, 132, 347, 627, 1032, 1046
MspI	CCGG	1 cut(s)	69
MspR9I	CCNGG	1 cut(s)	409
MunI	CAATTG	1 cut(s)	821
MvaI	CCWGG	1 cut(s)	409
MwoI	GCNNNNNNNGC	7 cut(s)	210, 374, 619, 803, 812, 1163, 1178
NdeII	GATC	7 cut(s)	181, 631, 695, 799, 816, 835, 1050
NlaIII	CATG	6 cut(s)	266, 346, 453, 588, 836, 1037
NlaIV	GGNNCC	5 cut(s)	229, 741, 770, 771, 1158
NmeAIII	GCCGAG	1 cut(s)	69
NmuCI	GTSAC	1 cut(s)	567
NsiI	ATGCAT	1 cut(s)	586
NspI	RCATGY	1 cut(s)	588
PfeI	GAWTC	6 cut(s)	52, 77, 221, 506, 593, 1131
PflMI	CCANNNNNTGG	2 cut(s)	414, 923
PinAI	ACCGGT	1 cut(s)	68
PkrI	GCNGC	9 cut(s)	102, 336, 439, 455, 612, 828, 831, 967, 1025
PleI	GAGTC	3 cut(s)	195, 205, 1061
PpsI	GAGTC	3 cut(s)	195, 205, 1061
PpuMI	RGGWCCY	2 cut(s)	30, 769
Psp5II	RGGWCCY	2 cut(s)	30, 769
Psp6I	CCWGG	1 cut(s)	407
PspGI	CCWGG	1 cut(s)	407
PspN4I	GGNNCC	5 cut(s)	229, 741, 770, 771, 1158
PspPI	GGNCC	5 cut(s)	30, 227, 269, 676, 769
PspPPI	RGGWCCY	2 cut(s)	30, 769
PstI	CTGCAG	1 cut(s)	615
PstNI	CAGNNNCTG	2 cut(s)	313, 610
PsuI	RGATCY	1 cut(s)	695
RsaI	GTAC	2 cut(s)	110, 238
RsaNI	GTAC	2 cut(s)	109, 237
RseI	CAYNNNNRTG	6 cut(s)	69, 132, 347, 627, 1032, 1046
SaqAI	TTAA	2 cut(s)	716, 732
SatI	GCNGC	9 cut(s)	101, 335, 438, 454, 611, 827, 830, 966, 1024
Sau3AI	GATC	7 cut(s)	181, 631, 695, 799, 816, 835, 1050
Sau96I	GGNCC	5 cut(s)	30, 227, 269, 676, 769
SchI	GAGTC	3 cut(s)	196, 206, 1061
ScrFI	CCNGG	1 cut(s)	409
SduI	GDGCHC	5 cut(s)	215, 555, 579, 867, 1106
SfaNI	GCATC	2 cut(s)	319, 863
SfcI	CTRYAG	3 cut(s)	153, 611, 1167
SinI	GGWCC	3 cut(s)	30, 269, 769
SmiMI	CAYNNNNRTG	6 cut(s)	69, 132, 347, 627, 1032, 1046
SmlI	CTYRAG	3 cut(s)	25, 176, 194
SmoI	CTYRAG	3 cut(s)	25, 176, 194
Sse9I	AATT	5 cut(s)	169, 728, 807, 821, 1147
SsiI	CCGC	3 cut(s)	428, 830, 1024
SspMI	CTAG	1 cut(s)	693
StyD4I	CCNGG	1 cut(s)	407
StyI	CCWWGG	1 cut(s)	499
TaaI	ACNGT	2 cut(s)	1013, 1048
TaqI	TCGA	2 cut(s)	50, 55
TaqII	GACCGA	1 cut(s)	799
TasI	AATT	5 cut(s)	169, 728, 807, 821, 1147
TauI	GCSGC	2 cut(s)	832, 1026
TfiI	GAWTC	6 cut(s)	52, 77, 221, 506, 593, 1131
Tru1I	TTAA	2 cut(s)	716, 732
Tru9I	TTAA	2 cut(s)	716, 732
TscAI	CASTG	3 cut(s)	419, 900, 1122
TseFI	GTSAC	1 cut(s)	567
TseI	GCWGC	7 cut(s)	100, 334, 437, 453, 610, 826, 965
Tsp45I	GTSAC	1 cut(s)	567
TspDTI	ATGAA	4 cut(s)	32, 53, 309, 437
TspGWI	ACGGA	2 cut(s)	388, 1190
TspRI	CASTG	3 cut(s)	419, 900, 1122
Van91I	CCANNNNNTGG	2 cut(s)	414, 923
VpaK11BI	GGWCC	3 cut(s)	30, 269, 769
XapI	RAATTY	1 cut(s)	728
XbaI	TCTAGA	1 cut(s)	692
XceI	RCATGY	1 cut(s)	588
XcmI	CCANNNNNNNNNTGG	1 cut(s)	131
XspI	CTAG	1 cut(s)	693
Zsp2I	ATGCAT	1 cut(s)	586

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.