Prupe.8G194100_v2.0.a1

Peptidyl-prolyl cis-trans isomerase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
18724616 .. 18728350
3735 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G194100.1

Sequence Viewer

Length: 1719 bp
ATGGATGAGGACTTTGACATGCCAGTGCCGGAGGAGATGAACGGGGACTTTGATCTACCCGACGAGGGTCCCGTTCTCAAGGTCGGTGAGGAGAAGGAGATCGGCAAGCAGGGCTTGAAGAAGAAGCTCCTCAAGGAAGGTGAAGGTTGGGACACCCCAAAAAATGGCGACGAGGTTGAAGTTCACTATACTGGGACATTGCTTGACGGGACTCAGTTCGATTCGAGCCGTGACAGGGGGACTCCATTCAAGTTCACTCTTGGACAAGGACAAGTGATTAAGGGATGGGATGAAGGTATTAGAACGATGAAGAAAGGTGAGGATGCCCTTTTCACCATCCCTCCTGAGCTGGCTTATGGAGAGACTGGATCCCCACCAACTATCCCTCCCAAAGCCACATTGCAGTTCGATGTTGAATTGCTATCTTGGACCAGTGTCAATGACATATCCAAGGATGGTGGAATAATTAAGAAGATCTTGAAAGAGGGAGAAAAATGGGAGAACCCAAAAGACCTTGACGAAGTTATAGTTAACTTTGAGGCTCGGCTTGATGATGGAAAAGTTGTTGAAAAATCTGACAGAGTGGAATTCACTGTCAAAGATGGTTACTTCTGTCCTGCGCTATCAAAGGCTGTTAAAACAATGAAGAAAGGGGAGAAGGTATTATTAACGGTGAAACCACAATATGGATTTGGGGATAAGGGTAAGCCTGCATCTGGTTATGTGGGTGCCGTTCCTCCAAATGCCACTCTTCACATCACTTTAGAGTTGGTATCATGGAAAACTGTCTCAGAAGTGACAGATGACAAGAAGGTTATTAAGAAGATCCTGAAAGAAGGGGAGGGATTTGAACGTCCAAATGAAGGGGCTGTTGTTAAATTGAAATTGATTGGGAAGCTGCAAGATGGTACGGAATTTTTGAAGAAAGGTCATGCTGAAGGAGAAGAGCTGTTCGAGTTTAAGACAGATGAGGAGGAAGTGATTGATGGGCTTGATAGAGCTGTCCTGACAATGAAGAAGGGTGAGGTAGCACTCCTGACCCTTGCACCAGAGTATGCATTTGGTTCTTCAGAGTCCCCACAGGAGTTGGCTGTGGTACCTCCTAATTCGACAGTCTACTATGAGGTTGAGCTCGTATCTTTTGAAAAGGATAAGGAATCATGGGACATGAATACCGAAGAAAAGATTGAAGCTGCTGGCAAGAAGAAGGAAGAAGGGAATGCACTGTTTAAGGCGGGTAAATATGCAAGAGCTTCCAAGAGATATGAAAAGGCTGTCAAGTACATTGATTATGATACTTCCTTTAGTGAAGAGGACAAAAAACAGTCTAAGGTGTTGAAGGTTGCTTGCAATCTTAACAATGCAGCTTGCAAGCTGAAGCTGAAAGATTATAAACAGGCTGAAAAGTTGTGTTCCAAGGTGTTGGAAATCGAGGGTAGAAATGTGAAGGCCCTGTACAGAAGGGCTCAGGCATATATTCAGCTGGCGGATTTGGATCTGGCTGAGCTTGACATCAAGAAGGCTCTTGAAATAGACCCCAACAACAGGGATGTGAAGTTGGAGTACAAGACTTTGAAGGAGAAGATGAAAGAATTCAATAAAAAGGAGGCCAAGTTTTACGGCAACATGTTTGCCAAATTGACCAAGTCGGACTCGCCGGATTCCAATAAAACAGCAGCTAAAGATGCTGAACCCATGAGCGTAGACAGCAAGGCGTAA

Protein Analysis

573

Amino Acids

63.93

Weight (kDa)

5.25

Isoelectric Point (pI)

30.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1392
Acc65I GGTACC 1 cut(s) 1096
AccB1I GGYRCC 2 cut(s) 728, 1096
AccB7I CCANNNNNTGG 2 cut(s) 164, 686
AccI GTMKAC 2 cut(s) 1116, 1704
AciI CCGC 2 cut(s) 1235, 1487
AclWI GGATC 4 cut(s) 363, 376, 820, 1503
AcsI RAATTY 3 cut(s) 587, 914, 1592
AcuI CTGAAG 3 cut(s) 957, 1053, 1397
AfaI GTAC 5 cut(s) 910, 1098, 1283, 1457, 1565
AfiI CCNNNNNNNGG 7 cut(s) 65, 164, 235, 686, 716, 863, 1545
AflIII ACRYGT 1 cut(s) 1626
Alw21I GWGCWC 1 cut(s) 1134
Alw26I GTCTC 2 cut(s) 356, 793
AlwI GGATC 4 cut(s) 363, 376, 820, 1503
AoxI GGCC 2 cut(s) 1449, 1608
ApeKI GCWGC 4 cut(s) 898, 1193, 1364, 1676
ApoI RAATTY 3 cut(s) 587, 914, 1592
Asp700I GAANNNNTTC 1 cut(s) 1592
Asp718I GGTACC 1 cut(s) 1096
AspLEI GCGC 1 cut(s) 622
AspS9I GGNCC 3 cut(s) 68, 429, 1450
AsuHPI GGTGA 6 cut(s) 98, 152, 325, 329, 685, 1034
AvaII GGWCC 2 cut(s) 68, 429
BamHI GGATCC 1 cut(s) 368
BanI GGYRCC 2 cut(s) 728, 1096
BanII GRGCYC 2 cut(s) 1134, 1468
BarI GAAGNNNNNNTAC 4 cut(s) 1439, 1471, 1547, 1579
Bbv12I GWGCWC 1 cut(s) 1134
BbvI GCAGC 4 cut(s) 885, 1180, 1376, 1688
BccI CCATC 7 cut(s) 279, 344, 449, 548, 596, 899, 980
BceAI ACGGC 3 cut(s) 213, 716, 1636
BcoDI GTCTC 2 cut(s) 356, 793
BglII AGATCT 1 cut(s) 474
BisI GCNGC 4 cut(s) 899, 1194, 1365, 1677
BlpI GCTNAGC 1 cut(s) 1503
BlsI GCNGC 4 cut(s) 900, 1195, 1366, 1678
Bme18I GGWCC 2 cut(s) 68, 429
BmgT120I GGNCC 3 cut(s) 68, 429, 1450
BmiI GGNNCC 5 cut(s) 69, 70, 370, 730, 1098
BmrI ACTGGG 1 cut(s) 201
BmsI GCATC 3 cut(s) 313, 722, 1675
BmuI ACTGGG 1 cut(s) 201
BoxI GACNNNNGTC 2 cut(s) 66, 434
Bpu10I CCTNAGC 2 cut(s) 345, 1467
Bpu1102I GCTNAGC 1 cut(s) 1503
BpuEI CTTGAG 2 cut(s) 62, 116
BsaBI GATNNNNATC 1 cut(s) 1494
BsaJI CCNNGG 2 cut(s) 450, 1416
BsaXI ACNNNNNCTCC 6 cut(s) 325, 355, 370, 400, 1598, 1628
Bsc4I CCNNNNNNNGG 7 cut(s) 65, 164, 235, 686, 716, 863, 1545
Bse1I ACTGG 4 cut(s) 23, 196, 370, 432
Bse3DI GCAATG 2 cut(s) 197, 398
Bse8I GATNNNNATC 1 cut(s) 1494
BseDI CCNNGG 2 cut(s) 450, 1416
BseGI GGATG 7 cut(s) 10, 290, 295, 328, 336, 460, 1555
BseJI GATNNNNATC 1 cut(s) 1494
BseLI CCNNNNNNNGG 7 cut(s) 65, 164, 235, 686, 716, 863, 1545
BseMI GCAATG 2 cut(s) 197, 398
BseMII CTCAG 5 cut(s) 227, 336, 804, 1481, 1494
BseNI ACTGG 4 cut(s) 23, 196, 370, 432
BseRI GAGGAG 4 cut(s) 47, 104, 119, 986
BseXI GCAGC 4 cut(s) 885, 1180, 1376, 1688
BshFI GGCC 2 cut(s) 1451, 1610
BshNI GGYRCC 2 cut(s) 728, 1096
BsiHKAI GWGCWC 1 cut(s) 1134
BsiSI CCGG 2 cut(s) 29, 1658
BslFI GGGAC 8 cut(s) 54, 59, 164, 208, 223, 253, 1060, 1178
BslI CCNNNNNNNGG 7 cut(s) 65, 164, 235, 686, 716, 863, 1545
BsmAI GTCTC 2 cut(s) 356, 793
BsmFI GGGAC 8 cut(s) 54, 59, 164, 208, 223, 253, 1060, 1178
BsmI GAATGC 1 cut(s) 1225
BsnI GGCC 2 cut(s) 1451, 1610
Bsp1286I GDGCHC 2 cut(s) 1134, 1468
Bsp1407I TGTACA 1 cut(s) 1455
Bsp143I GATC 6 cut(s) 52, 99, 368, 474, 825, 1495
Bsp1720I GCTNAGC 1 cut(s) 1503
BspACI CCGC 2 cut(s) 1235, 1487
BspANI GGCC 2 cut(s) 1451, 1610
BspCNI CTCAG 5 cut(s) 226, 337, 803, 1480, 1495
BspLI GGNNCC 5 cut(s) 69, 70, 370, 730, 1098
BspPI GGATC 4 cut(s) 363, 376, 820, 1503
BspQI GCTCTTC 1 cut(s) 939
BspT107I GGYRCC 2 cut(s) 728, 1096
BsrDI GCAATG 2 cut(s) 197, 398
BsrGI TGTACA 1 cut(s) 1455
BsrI ACTGG 4 cut(s) 23, 196, 370, 432
BssECI CCNNGG 2 cut(s) 450, 1416
BssMI GATC 6 cut(s) 52, 99, 368, 474, 825, 1495
BssT1I CCWWGG 2 cut(s) 450, 1416
Bst4CI ACNGT 6 cut(s) 595, 673, 787, 1114, 1227, 1326
Bst6I CTCTTC 3 cut(s) 756, 939, 1305
BstAUI TGTACA 1 cut(s) 1455
BstC8I GCNNGC 8 cut(s) 107, 351, 711, 1198, 1348, 1369, 1373, 1485
BstDEI CTNAG 6 cut(s) 213, 345, 790, 1329, 1467, 1503
BstF5I GGATG 7 cut(s) 10, 290, 295, 328, 336, 460, 1555
BstHHI GCGC 1 cut(s) 622
BstKTI GATC 6 cut(s) 55, 102, 371, 477, 828, 1498
BstMAI GTCTC 2 cut(s) 356, 793
BstMBI GATC 6 cut(s) 52, 99, 368, 474, 825, 1495
BstMWI GCNNNNNNNGC 3 cut(s) 111, 1685, 1707
BstNSI RCATGY 2 cut(s) 22, 1630
BstPAI GACNNNNGTC 2 cut(s) 66, 434
BstV1I GCAGC 4 cut(s) 885, 1180, 1376, 1688
BstX2I RGATCY 4 cut(s) 368, 474, 825, 1495
BstXI CCANNNNNNTGG 1 cut(s) 1423
BstYI RGATCY 4 cut(s) 368, 474, 825, 1495
BsuRI GGCC 2 cut(s) 1451, 1610
BtsCI GGATG 7 cut(s) 10, 290, 295, 328, 336, 460, 1555
BtsIMutI CAGTG 4 cut(s) 30, 439, 591, 1223
Cac8I GCNNGC 8 cut(s) 107, 351, 711, 1198, 1348, 1369, 1373, 1485
CfoI GCGC 1 cut(s) 622
Cfr13I GGNCC 3 cut(s) 68, 429, 1450
Csp6I GTAC 5 cut(s) 909, 1097, 1282, 1456, 1564
CspCI CAANNNNNGTGG 4 cut(s) 439, 474, 1068, 1103
CviAII CATG 7 cut(s) 19, 777, 932, 1161, 1168, 1627, 1696
CviQI GTAC 5 cut(s) 909, 1097, 1282, 1456, 1564
DdeI CTNAG 6 cut(s) 213, 345, 790, 1329, 1467, 1503
DpnI GATC 6 cut(s) 54, 101, 370, 476, 827, 1497
DpnII GATC 6 cut(s) 52, 99, 368, 474, 825, 1495
Eam1104I CTCTTC 3 cut(s) 756, 939, 1305
EarI CTCTTC 3 cut(s) 756, 939, 1305
EciI GGCGGA 1 cut(s) 1502
Ecl136II GAGCTC 1 cut(s) 1132
Eco130I CCWWGG 2 cut(s) 450, 1416
Eco24I GRGCYC 2 cut(s) 1134, 1468
Eco47I GGWCC 2 cut(s) 68, 429
Eco53kI GAGCTC 1 cut(s) 1132
Eco57I CTGAAG 3 cut(s) 957, 1053, 1397
EcoICRI GAGCTC 1 cut(s) 1132
EcoO109I RGGNCCY 2 cut(s) 68, 1450
EcoRI GAATTC 2 cut(s) 587, 1592
EcoT14I CCWWGG 2 cut(s) 450, 1416
EcoT22I ATGCAT 1 cut(s) 1060
EcoT38I GRGCYC 2 cut(s) 1134, 1468
ErhI CCWWGG 2 cut(s) 450, 1416
FaeI CATG 7 cut(s) 22, 780, 935, 1164, 1171, 1630, 1699
FalI AAGNNNNNCTT 4 cut(s) 98, 130, 461, 493
FaqI GGGAC 8 cut(s) 54, 59, 164, 208, 223, 253, 1060, 1178
FatI CATG 7 cut(s) 18, 776, 931, 1160, 1167, 1626, 1695
FauI CCCGC 1 cut(s) 1228
FblI GTMKAC 2 cut(s) 1116, 1704
Fnu4HI GCNGC 4 cut(s) 899, 1194, 1365, 1677
FokI GGATG 7 cut(s) 17, 297, 302, 323, 335, 467, 1562
FriOI GRGCYC 2 cut(s) 1134, 1468
Fsp4HI GCNGC 4 cut(s) 899, 1194, 1365, 1677
GlaI GCGC 1 cut(s) 621
GluI GCNGC 4 cut(s) 899, 1194, 1365, 1677
HaeIII GGCC 2 cut(s) 1451, 1610
HapII CCGG 2 cut(s) 29, 1658
HhaI GCGC 1 cut(s) 622
Hin1II CATG 7 cut(s) 22, 780, 935, 1164, 1171, 1630, 1699
Hin6I GCGC 1 cut(s) 620
HinP1I GCGC 1 cut(s) 620
HincII GTYRAC 1 cut(s) 532
HindII GTYRAC 1 cut(s) 532
HinfI GANTC 7 cut(s) 211, 221, 241, 1073, 1157, 1652, 1661
HpaI GTTAAC 1 cut(s) 532
HpaII CCGG 2 cut(s) 29, 1658
HphI GGTGA 6 cut(s) 98, 152, 325, 329, 685, 1034
Hpy166II GTNNAC 5 cut(s) 184, 255, 532, 1117, 1705
Hpy188I TCNGA 4 cut(s) 577, 793, 1072, 1651
Hpy188III TCNNGA 7 cut(s) 344, 478, 829, 1006, 1036, 1516, 1526
Hpy8I GTNNAC 5 cut(s) 184, 255, 532, 1117, 1705
Hpy99I CGWCG 2 cut(s) 65, 173
HpyCH4III ACNGT 6 cut(s) 595, 673, 787, 1114, 1227, 1326
HpyCH4IV ACGT 1 cut(s) 853
HpyF10VI GCNNNNNNNGC 3 cut(s) 111, 1685, 1707
HpyF3I CTNAG 6 cut(s) 213, 345, 790, 1329, 1467, 1503
HpySE526I ACGT 1 cut(s) 853
Hsp92II CATG 7 cut(s) 22, 780, 935, 1164, 1171, 1630, 1699
HspAI GCGC 1 cut(s) 620
KflI GGGWCCC 1 cut(s) 68
KpnI GGTACC 1 cut(s) 1100
KspAI GTTAAC 1 cut(s) 532
Kzo9I GATC 6 cut(s) 52, 99, 368, 474, 825, 1495
LguI GCTCTTC 1 cut(s) 939
LmnI GCTCC 1 cut(s) 132
Lsp1109I GCAGC 4 cut(s) 885, 1180, 1376, 1688
LweI GCATC 3 cut(s) 313, 722, 1675
MaeII ACGT 1 cut(s) 853
MaeIII GTNAC 3 cut(s) 230, 605, 796
MalI GATC 6 cut(s) 54, 101, 370, 476, 827, 1497
MboI GATC 6 cut(s) 52, 99, 368, 474, 825, 1495
MflI RGATCY 4 cut(s) 368, 474, 825, 1495
MhlI GDGCHC 2 cut(s) 1134, 1468
MluCI AATT 9 cut(s) 416, 465, 587, 878, 884, 914, 1105, 1592, 1637
MlyI GAGTC 4 cut(s) 205, 235, 1082, 1646
MmeI TCCRAC 3 cut(s) 1404, 1539, 1629
Mph1103I ATGCAT 1 cut(s) 1060
MroXI GAANNNNTTC 1 cut(s) 1592
MslI CAYNNNNRTG 1 cut(s) 23
MspA1I CMGCKG 1 cut(s) 1483
MspI CCGG 2 cut(s) 29, 1658
Mva1269I GAATGC 1 cut(s) 1225
MwoI GCNNNNNNNGC 3 cut(s) 111, 1685, 1707
NdeII GATC 6 cut(s) 52, 99, 368, 474, 825, 1495
NlaIII CATG 7 cut(s) 22, 780, 935, 1164, 1171, 1630, 1699
NlaIV GGNNCC 5 cut(s) 69, 70, 370, 730, 1098
NmeAIII GCCGAG 1 cut(s) 523
NmuCI GTSAC 2 cut(s) 230, 796
NsiI ATGCAT 1 cut(s) 1060
NspI RCATGY 2 cut(s) 22, 1630
PciI ACATGT 1 cut(s) 1626
PciSI GCTCTTC 1 cut(s) 939
PcsI WCGNNNNNNNCGW 1 cut(s) 69
PctI GAATGC 1 cut(s) 1225
PdmI GAANNNNTTC 1 cut(s) 1592
PfeI GAWTC 3 cut(s) 221, 1157, 1661
PflFI GACNNNGTC 1 cut(s) 1645
PflMI CCANNNNNTGG 2 cut(s) 164, 686
PkrI GCNGC 4 cut(s) 900, 1195, 1366, 1678
PleI GAGTC 4 cut(s) 205, 235, 1081, 1646
PpsI GAGTC 4 cut(s) 205, 235, 1081, 1646
PpuMI RGGWCCY 1 cut(s) 68
PscI ACATGT 1 cut(s) 1626
PshAI GACNNNNGTC 2 cut(s) 66, 434
PsiI TTATAA 1 cut(s) 1392
Psp124BI GAGCTC 1 cut(s) 1134
Psp5II RGGWCCY 1 cut(s) 68
PspN4I GGNNCC 5 cut(s) 69, 70, 370, 730, 1098
PspPI GGNCC 3 cut(s) 68, 429, 1450
PspPPI RGGWCCY 1 cut(s) 68
PsuI RGATCY 4 cut(s) 368, 474, 825, 1495
PsyI GACNNNGTC 1 cut(s) 1645
PvuII CAGCTG 1 cut(s) 1483
RsaI GTAC 5 cut(s) 910, 1098, 1283, 1457, 1565
RsaNI GTAC 5 cut(s) 909, 1097, 1282, 1456, 1564
RseI CAYNNNNRTG 1 cut(s) 23
SacI GAGCTC 1 cut(s) 1134
SapI GCTCTTC 1 cut(s) 939
SatI GCNGC 4 cut(s) 899, 1194, 1365, 1677
Sau3AI GATC 6 cut(s) 52, 99, 368, 474, 825, 1495
Sau96I GGNCC 3 cut(s) 68, 429, 1450
SchI GAGTC 4 cut(s) 205, 235, 1082, 1646
SduI GDGCHC 2 cut(s) 1134, 1468
SfaNI GCATC 3 cut(s) 313, 722, 1675
SinI GGWCC 2 cut(s) 68, 429
SmiMI CAYNNNNRTG 1 cut(s) 23
SmlI CTYRAG 2 cut(s) 77, 131
SmoI CTYRAG 2 cut(s) 77, 131
Sse9I AATT 9 cut(s) 416, 465, 587, 878, 884, 914, 1105, 1592, 1637
SsiI CCGC 2 cut(s) 1235, 1487
SstI GAGCTC 1 cut(s) 1134
StyI CCWWGG 2 cut(s) 450, 1416
TaaI ACNGT 6 cut(s) 595, 673, 787, 1114, 1227, 1326
TaiI ACGT 1 cut(s) 856
TaqI TCGA 6 cut(s) 219, 224, 408, 954, 1109, 1431
TasI AATT 9 cut(s) 416, 465, 587, 878, 884, 914, 1105, 1592, 1637
TatI WGTACW 3 cut(s) 1281, 1455, 1563
TfiI GAWTC 3 cut(s) 221, 1157, 1661
TscAI CASTG 4 cut(s) 30, 439, 598, 1230
TseFI GTSAC 2 cut(s) 230, 796
TseI GCWGC 4 cut(s) 898, 1193, 1364, 1676
Tsp45I GTSAC 2 cut(s) 230, 796
TspDTI ATGAA 9 cut(s) 53, 306, 323, 659, 876, 1028, 1184, 1281, 1601
TspGWI ACGGA 1 cut(s) 926
TspRI CASTG 4 cut(s) 30, 439, 598, 1230
Tth111I GACNNNGTC 1 cut(s) 1645
Van91I CCANNNNNTGG 2 cut(s) 164, 686
VpaK11BI GGWCC 2 cut(s) 68, 429
XapI RAATTY 3 cut(s) 587, 914, 1592
XceI RCATGY 2 cut(s) 22, 1630
XmiI GTMKAC 2 cut(s) 1116, 1704
XmnI GAANNNNTTC 1 cut(s) 1592
Zsp2I ATGCAT 1 cut(s) 1060
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.