pycom05g15490

Peptidyl-prolyl cis-trans isomerase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
19051353 .. 19054322
2970 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g15490.2

Sequence Viewer

Length: 1605 bp
ATGGACGAGGACTTCGATATGCCCGGGGTGGAGGAGATGAACGAGGACTTCGATCTCCCCGACGAGGGGCCGGTCCTGAAGGTCGGCGAGGAGAAGGAGATCGGCCACCAGGGCTTGAAGAAGAAGCTACTCAAGGAAGGTGAAGGCTGGGACACCCCCAATAATGGCGACGAAGTTGAAGTTCATTATACCGGGACATTGCTGGACGGGACTCAGTTCGATTCGAGCCGCGACAGTGGGACTCCGTTCAAGTTCACTCTCGGACAAGGGCAAGTGATTAAAGGATGGGATGAAGGCATTAGAACAATGAAGAAAGGTGAGAGTGCCCTTTTCACCATTCATCCTGCGTTGGCTTATGGAGAGTCTGGATCGCCACCAACTATCCCTCCCAGTGCCACATTGCAATTCGACGTTGAATTGCTATCGTGGACCAGTGTCAATGACATATCCAAGGATGGTGGTGTAATCAAGAAGATTTTGAAAGAGGGAGAAAAATGGGAGAACCCAAAAGACCTCGACGAAGTTATAGTTAATTTTGAGGTGCAGCTTGAAGATAAAACACTTGTTGCAAAATCTCAAGATGTGGAATTCACTGTCAAAGACGGTTACTTCTGTCCTGCAATTTCAAAGGCTGTTAAAACAATGAAGAAGGGGGAGAAGGTATTGTTAACGGTTAAACCACAATATGGATTTGGGGATCAAGGCAAACCTGCATCTGGTTCCGAGGGTGCAGTTCCTCCAAATACAACTCTGCATATCACTTTAGAGTTGGTATCATGGAGAACTGTATCTGCAGTGACAGATGACAAGAAGGTTATTAAGAAGATCCTGAAAGAAGGGGAGGGGTATGAGCGTCCAAATGAAGGGGCTGTTGTTAAATTGAAATTGATTGGGAAGCTGCAAGATGGGAAGGAATTTTTGAAGAAAGGTCATGCCGAAGGAGAAGACCTGTTTGAGTTTAAAACAGACGAAGAGCAAGTGATTGACGGGCTTGATAGAGCTGTACTGACAATGAAGAAGGGTGAGGTAGCACTCCTGACTATTGCACCAGAGTATGCATTTGGCTCGTTGGAGTCCCAGCAGGAGTTGGCTGTGGTACCTCCTAACTCAACTGTCAACTATGAGGTTGAGCTTGCATCTTTTGAGAAGGATAAGGAATCGTGGGACATGAATACTGAGGAAAAAATTGAAGCTGCTGGTAAGAAGAAGGAAGAAGGGAATGCTTTGTTTAAGGCGGGTAAATATGTAAGAGCTTCCAAGAGATACGAGAAGGCTGTGAAGTACATTGACTATGACTCTAGCTTCAGTGAAGAAGCGAAAAAACAAGCCAAGGCGTTGAAGGTTGCCTGCAATCTTAACGATGCAGCTTGCAAGCTGAAGCTGAAAGAATATAAACAGGCTGAAAAATTGTGTTCCAAGGTGTTGGAACTCGAGGGCAGAAATGTGAAGGCTCTGTACAGAAGGGCTCAGGCATATATTCAGCTTGCAGATTTGGATTTAGCTGAGCTTGACATCAAGAAAGCTCTTGAAATAGACCCTAACAACAGGTATGGATGTGAAGCTGGAGCACAAGACATTGAAGGAGAAGATGAAAGAATACAATAA

Protein Analysis

535

Amino Acids

59.28

Weight (kDa)

4.92

Isoelectric Point (pI)

27.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 718
Acc65I GGTACC 1 cut(s) 1096
AccB1I GGYRCC 1 cut(s) 1096
AccB7I CCANNNNNTGG 1 cut(s) 686
AccII CGCG 1 cut(s) 231
AciI CCGC 2 cut(s) 229, 1235
AclWI GGATC 3 cut(s) 376, 705, 820
AcoI YGGCCR 1 cut(s) 103
AcsI RAATTY 2 cut(s) 587, 914
AcuI CTGAAG 3 cut(s) 98, 1288, 1397
AfaI GTAC 4 cut(s) 1005, 1098, 1283, 1457
AfiI CCNNNNNNNGG 7 cut(s) 64, 65, 66, 164, 686, 716, 863
AjnI CCWGG 1 cut(s) 108
Alw21I GWGCWC 1 cut(s) 1570
AlwI GGATC 3 cut(s) 376, 705, 820
Ama87I CYCGRG 2 cut(s) 23, 1430
AoxI GGCC 2 cut(s) 68, 103
ApeKI GCWGC 4 cut(s) 544, 898, 1193, 1364
ApoI RAATTY 2 cut(s) 587, 914
ArsI GACNNNNNNTTYG 1 cut(s) 28
Asp718I GGTACC 1 cut(s) 1096
AspS9I GGNCC 3 cut(s) 68, 73, 429
AsuC2I CCSGG 3 cut(s) 24, 25, 193
AsuHPI GGTGA 4 cut(s) 152, 325, 329, 1034
AvaI CYCGRG 2 cut(s) 23, 1430
AvaII GGWCC 2 cut(s) 73, 429
BaeGI GKGCMC 1 cut(s) 328
BanI GGYRCC 1 cut(s) 1096
BanII GRGCYC 1 cut(s) 1468
BarI GAAGNNNNNNTAC 2 cut(s) 1439, 1471
BbsI GAAGAC 1 cut(s) 951
Bbv12I GWGCWC 1 cut(s) 1570
BbvI GCAGC 4 cut(s) 556, 885, 1180, 1376
BccI CCATC 3 cut(s) 279, 449, 899
BcgI CGANNNNNNTGC 2 cut(s) 1047, 1081
BciT130I CCWGG 1 cut(s) 110
BcnI CCSGG 3 cut(s) 24, 25, 193
BfaI CTAG 1 cut(s) 1299
BfmI CTRYAG 1 cut(s) 792
BfuAI ACCTGC 1 cut(s) 718
BglI GCCNNNNNGGC 1 cut(s) 111
BisI GCNGC 5 cut(s) 229, 545, 899, 1194, 1365
BlpI GCTNAGC 1 cut(s) 1503
BlsI GCNGC 5 cut(s) 230, 546, 900, 1195, 1366
Bme1390I CCNGG 4 cut(s) 24, 25, 110, 193
Bme18I GGWCC 2 cut(s) 73, 429
BmeT110I CYCGRG 2 cut(s) 23, 1430
BmgT120I GGNCC 3 cut(s) 68, 73, 429
BmiI GGNNCC 3 cut(s) 69, 721, 1098
BmrFI CCNGG 4 cut(s) 24, 25, 110, 193
BmrI ACTGGG 1 cut(s) 384
BmsI GCATC 3 cut(s) 722, 1145, 1351
BmuI ACTGGG 1 cut(s) 384
BoxI GACNNNNGTC 1 cut(s) 434
BpiI GAAGAC 1 cut(s) 951
BpmI CTGGAG 1 cut(s) 1584
Bpu10I CCTNAGC 1 cut(s) 1467
Bpu1102I GCTNAGC 1 cut(s) 1503
BpuEI CTTGAG 2 cut(s) 116, 561
BpuMI CCSGG 3 cut(s) 24, 25, 193
BsaJI CCNNGG 7 cut(s) 23, 24, 109, 450, 723, 1329, 1416
BsaXI ACNNNNNCTCC 2 cut(s) 370, 400
Bsc4I CCNNNNNNNGG 7 cut(s) 64, 65, 66, 164, 686, 716, 863
Bse118I RCCGGY 1 cut(s) 70
Bse1I ACTGG 2 cut(s) 390, 432
Bse3DI GCAATG 2 cut(s) 197, 398
BseBI CCWGG 1 cut(s) 110
BseDI CCNNGG 7 cut(s) 23, 24, 109, 450, 723, 1329, 1416
BseGI GGATG 5 cut(s) 290, 295, 340, 460, 1559
BseLI CCNNNNNNNGG 7 cut(s) 64, 65, 66, 164, 686, 716, 863
BseMI GCAATG 2 cut(s) 197, 398
BseMII CTCAG 4 cut(s) 227, 1167, 1481, 1494
BseNI ACTGG 2 cut(s) 390, 432
BseRI GAGGAG 2 cut(s) 47, 104
BseSI GKGCMC 1 cut(s) 328
BseXI GCAGC 4 cut(s) 556, 885, 1180, 1376
BseYI CCCAGC 2 cut(s) 147, 1077
BsgI GTGCAG 2 cut(s) 563, 750
Bsh1236I CGCG 1 cut(s) 231
BshFI GGCC 2 cut(s) 70, 105
BshNI GGYRCC 1 cut(s) 1096
BsiHKAI GWGCWC 1 cut(s) 1570
BsiHKCI CYCGRG 2 cut(s) 23, 1430
BsiSI CCGG 3 cut(s) 24, 71, 192
BslFI GGGAC 6 cut(s) 164, 208, 223, 253, 1060, 1178
BslI CCNNNNNNNGG 7 cut(s) 64, 65, 66, 164, 686, 716, 863
BsmFI GGGAC 6 cut(s) 164, 208, 223, 253, 1060, 1178
BsmI GAATGC 1 cut(s) 1225
BsnI GGCC 2 cut(s) 70, 105
BsoBI CYCGRG 2 cut(s) 23, 1430
Bsp1286I GDGCHC 3 cut(s) 328, 1468, 1570
Bsp1407I TGTACA 1 cut(s) 1455
Bsp143I GATC 5 cut(s) 52, 99, 368, 697, 825
Bsp1720I GCTNAGC 1 cut(s) 1503
BspACI CCGC 2 cut(s) 229, 1235
BspANI GGCC 2 cut(s) 70, 105
BspCNI CTCAG 4 cut(s) 226, 1168, 1480, 1495
BspFNI CGCG 1 cut(s) 231
BspLI GGNNCC 3 cut(s) 69, 721, 1098
BspMAI CTGCAG 1 cut(s) 796
BspMI ACCTGC 1 cut(s) 718
BspPI GGATC 3 cut(s) 376, 705, 820
BspQI GCTCTTC 1 cut(s) 966
BspT107I GGYRCC 1 cut(s) 1096
BsrDI GCAATG 2 cut(s) 197, 398
BsrFI RCCGGY 1 cut(s) 70
BsrGI TGTACA 1 cut(s) 1455
BsrI ACTGG 2 cut(s) 390, 432
BssAI RCCGGY 1 cut(s) 70
BssECI CCNNGG 7 cut(s) 23, 24, 109, 450, 723, 1329, 1416
BssMI GATC 5 cut(s) 52, 99, 368, 697, 825
BssT1I CCWWGG 3 cut(s) 450, 1329, 1416
Bst2UI CCWGG 1 cut(s) 110
Bst4CI ACNGT 6 cut(s) 236, 595, 605, 673, 787, 1114
Bst6I CTCTTC 1 cut(s) 966
BstAUI TGTACA 1 cut(s) 1455
BstC8I GCNNGC 5 cut(s) 1134, 1348, 1369, 1373, 1485
BstDEI CTNAG 4 cut(s) 213, 1176, 1467, 1503
BstF5I GGATG 5 cut(s) 290, 295, 340, 460, 1559
BstFNI CGCG 1 cut(s) 231
BstKTI GATC 5 cut(s) 55, 102, 371, 700, 828
BstMBI GATC 5 cut(s) 52, 99, 368, 697, 825
BstMWI GCNNNNNNNGC 1 cut(s) 111
BstNI CCWGG 1 cut(s) 110
BstPAI GACNNNNGTC 1 cut(s) 434
BstSCI CCNGG 4 cut(s) 22, 23, 108, 191
BstSFI CTRYAG 1 cut(s) 792
BstSLI GKGCMC 1 cut(s) 328
BstUI CGCG 1 cut(s) 231
BstV1I GCAGC 4 cut(s) 556, 885, 1180, 1376
BstV2I GAAGAC 1 cut(s) 951
BstX2I RGATCY 1 cut(s) 825
BstXI CCANNNNNNTGG 1 cut(s) 1423
BstYI RGATCY 1 cut(s) 825
BsuRI GGCC 2 cut(s) 70, 105
BtsCI GGATG 5 cut(s) 290, 295, 340, 460, 1559
BtsI GCAGTG 1 cut(s) 801
BtsIMutI CAGTG 6 cut(s) 241, 397, 439, 591, 801, 1312
BveI ACCTGC 1 cut(s) 718
Cac8I GCNNGC 5 cut(s) 1134, 1348, 1369, 1373, 1485
Cfr10I RCCGGY 1 cut(s) 70
Cfr13I GGNCC 3 cut(s) 68, 73, 429
Cfr9I CCCGGG 1 cut(s) 23
CseI GACGC 1 cut(s) 842
Csp6I GTAC 4 cut(s) 1004, 1097, 1282, 1456
CspCI CAANNNNNGTGG 2 cut(s) 439, 474
CviAII CATG 3 cut(s) 777, 932, 1168
CviQI GTAC 4 cut(s) 1004, 1097, 1282, 1456
DdeI CTNAG 4 cut(s) 213, 1176, 1467, 1503
DpnI GATC 5 cut(s) 54, 101, 370, 699, 827
DpnII GATC 5 cut(s) 52, 99, 368, 697, 825
DraI TTTAAA 1 cut(s) 961
EaeI YGGCCR 1 cut(s) 103
Eam1104I CTCTTC 1 cut(s) 966
EarI CTCTTC 1 cut(s) 966
Eco130I CCWWGG 3 cut(s) 450, 1329, 1416
Eco24I GRGCYC 1 cut(s) 1468
Eco47I GGWCC 2 cut(s) 73, 429
Eco57I CTGAAG 3 cut(s) 98, 1288, 1397
Eco88I CYCGRG 2 cut(s) 23, 1430
EcoRI GAATTC 1 cut(s) 587
EcoRII CCWGG 1 cut(s) 108
EcoT14I CCWWGG 3 cut(s) 450, 1329, 1416
EcoT22I ATGCAT 1 cut(s) 1060
EcoT38I GRGCYC 1 cut(s) 1468
ErhI CCWWGG 3 cut(s) 450, 1329, 1416
FaeI CATG 3 cut(s) 780, 935, 1171
FaqI GGGAC 6 cut(s) 164, 208, 223, 253, 1060, 1178
FatI CATG 3 cut(s) 776, 931, 1167
FauI CCCGC 1 cut(s) 1228
Fnu4HI GCNGC 5 cut(s) 229, 545, 899, 1194, 1365
FokI GGATG 5 cut(s) 297, 302, 327, 467, 1566
FriOI GRGCYC 1 cut(s) 1468
Fsp4HI GCNGC 5 cut(s) 229, 545, 899, 1194, 1365
FspBI CTAG 1 cut(s) 1299
GluI GCNGC 5 cut(s) 229, 545, 899, 1194, 1365
GsaI CCCAGC 2 cut(s) 151, 1081
GsuI CTGGAG 1 cut(s) 1584
HaeIII GGCC 2 cut(s) 70, 105
HapII CCGG 3 cut(s) 24, 71, 192
HgaI GACGC 1 cut(s) 842
Hin1II CATG 3 cut(s) 780, 935, 1171
HincII GTYRAC 2 cut(s) 669, 1117
HindII GTYRAC 2 cut(s) 669, 1117
HinfI GANTC 7 cut(s) 211, 221, 241, 362, 1073, 1157, 1295
HpaI GTTAAC 1 cut(s) 669
HpaII CCGG 3 cut(s) 24, 71, 192
HphI GGTGA 4 cut(s) 152, 325, 329, 1034
Hpy166II GTNNAC 4 cut(s) 255, 429, 669, 1117
Hpy188I TCNGA 2 cut(s) 263, 724
Hpy188III TCNNGA 8 cut(s) 76, 366, 469, 578, 829, 1036, 1516, 1526
Hpy8I GTNNAC 4 cut(s) 255, 429, 669, 1117
Hpy99I CGWCG 4 cut(s) 65, 173, 413, 521
HpyCH4III ACNGT 6 cut(s) 236, 595, 605, 673, 787, 1114
HpyCH4IV ACGT 1 cut(s) 411
HpyF10VI GCNNNNNNNGC 1 cut(s) 111
HpyF3I CTNAG 4 cut(s) 213, 1176, 1467, 1503
HpySE526I ACGT 1 cut(s) 411
Hsp92II CATG 3 cut(s) 780, 935, 1171
KpnI GGTACC 1 cut(s) 1100
KspAI GTTAAC 1 cut(s) 669
Kzo9I GATC 5 cut(s) 52, 99, 368, 697, 825
LguI GCTCTTC 1 cut(s) 966
LmnI GCTCC 1 cut(s) 1565
Lsp1109I GCAGC 4 cut(s) 556, 885, 1180, 1376
LweI GCATC 3 cut(s) 722, 1145, 1351
MaeI CTAG 1 cut(s) 1299
MaeII ACGT 1 cut(s) 411
MaeIII GTNAC 2 cut(s) 605, 796
MalI GATC 5 cut(s) 54, 101, 370, 699, 827
MboI GATC 5 cut(s) 52, 99, 368, 697, 825
MflI RGATCY 1 cut(s) 825
MhlI GDGCHC 3 cut(s) 328, 1468, 1570
MlyI GAGTC 5 cut(s) 205, 235, 371, 1082, 1289
MmeI TCCRAC 2 cut(s) 1050, 1404
Mph1103I ATGCAT 1 cut(s) 1060
MspI CCGG 3 cut(s) 24, 71, 192
MspR9I CCNGG 4 cut(s) 24, 25, 110, 193
Mva1269I GAATGC 1 cut(s) 1225
MvaI CCWGG 1 cut(s) 110
MvnI CGCG 1 cut(s) 231
MwoI GCNNNNNNNGC 1 cut(s) 111
NciI CCSGG 3 cut(s) 24, 25, 193
NdeII GATC 5 cut(s) 52, 99, 368, 697, 825
NlaIII CATG 3 cut(s) 780, 935, 1171
NlaIV GGNNCC 3 cut(s) 69, 721, 1098
NmuCI GTSAC 1 cut(s) 796
NsiI ATGCAT 1 cut(s) 1060
PaeR7I CTCGAG 1 cut(s) 1430
PciSI GCTCTTC 1 cut(s) 966
PcsI WCGNNNNNNNCGW 3 cut(s) 12, 48, 57
PctI GAATGC 1 cut(s) 1225
PfeI GAWTC 2 cut(s) 221, 1157
PflMI CCANNNNNTGG 1 cut(s) 686
PkrI GCNGC 5 cut(s) 230, 546, 900, 1195, 1366
PleI GAGTC 5 cut(s) 205, 235, 370, 1081, 1289
PpsI GAGTC 5 cut(s) 205, 235, 370, 1081, 1289
PshAI GACNNNNGTC 1 cut(s) 434
Psp6I CCWGG 1 cut(s) 108
PspFI CCCAGC 2 cut(s) 147, 1077
PspGI CCWGG 1 cut(s) 108
PspN4I GGNNCC 3 cut(s) 69, 721, 1098
PspPI GGNCC 3 cut(s) 68, 73, 429
PspXI VCTCGAGB 1 cut(s) 1430
PstI CTGCAG 1 cut(s) 796
PsuI RGATCY 1 cut(s) 825
RsaI GTAC 4 cut(s) 1005, 1098, 1283, 1457
RsaNI GTAC 4 cut(s) 1004, 1097, 1282, 1456
SapI GCTCTTC 1 cut(s) 966
SatI GCNGC 5 cut(s) 229, 545, 899, 1194, 1365
Sau3AI GATC 5 cut(s) 52, 99, 368, 697, 825
Sau96I GGNCC 3 cut(s) 68, 73, 429
SchI GAGTC 5 cut(s) 205, 235, 371, 1082, 1289
ScrFI CCNGG 4 cut(s) 24, 25, 110, 193
SduI GDGCHC 3 cut(s) 328, 1468, 1570
SfaNI GCATC 3 cut(s) 722, 1145, 1351
SfcI CTRYAG 1 cut(s) 792
Sfr274I CTCGAG 1 cut(s) 1430
SinI GGWCC 2 cut(s) 73, 429
SlaI CTCGAG 1 cut(s) 1430
SmaI CCCGGG 1 cut(s) 25
SmlI CTYRAG 3 cut(s) 131, 576, 1430
SmoI CTYRAG 3 cut(s) 131, 576, 1430
SsiI CCGC 2 cut(s) 229, 1235
SspMI CTAG 1 cut(s) 1299
StyD4I CCNGG 4 cut(s) 22, 23, 108, 191
StyI CCWWGG 3 cut(s) 450, 1329, 1416
TaaI ACNGT 6 cut(s) 236, 595, 605, 673, 787, 1114
TaiI ACGT 1 cut(s) 414
TaqI TCGA 7 cut(s) 15, 51, 219, 224, 408, 516, 1431
TatI WGTACW 3 cut(s) 1003, 1281, 1455
TauI GCSGC 1 cut(s) 231
TfiI GAWTC 2 cut(s) 221, 1157
TscAI CASTG 6 cut(s) 241, 397, 439, 598, 801, 1312
TseFI GTSAC 1 cut(s) 796
TseI GCWGC 4 cut(s) 544, 898, 1193, 1364
Tsp45I GTSAC 1 cut(s) 796
TspGWI ACGGA 1 cut(s) 234
TspMI CCCGGG 1 cut(s) 23
TspRI CASTG 6 cut(s) 241, 397, 439, 598, 801, 1312
Van91I CCANNNNNTGG 1 cut(s) 686
VpaK11BI GGWCC 2 cut(s) 73, 429
XapI RAATTY 2 cut(s) 587, 914
XhoI CTCGAG 1 cut(s) 1430
XmaI CCCGGG 1 cut(s) 23
XspI CTAG 1 cut(s) 1299
Zsp2I ATGCAT 1 cut(s) 1060
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.