Peptidyl-prolyl cis-trans isomerase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G25230 AT3G25230 |
| fragaria_vesca | FvH4_2g18150 FvH4_2g18150 FvH4_2g18150 |
| malus_domestica | MD05G1166200.v1.1 MD10G1156300.v1.1 |
| prunus_persica | Prupe.8G194100_v2.0.a1 |
| pyrus_communis | pycom05g15490 pycom10g13450 |
| rosa_chinensis | RchiOBHm_Chr6g0283541 RchiOBHm_Chr7g0204881 |
| rosa_laevigata | RLG00000003424 RLG00000012818 |
| rosa_multiflora | Rmu_sc0005719.1_g000005 Rmu_sc0007194.1_g000004 Rmu_sc0031409.1_g000001 Rmu_sc0031410.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00252700 Rroxscaffold_7G00185450 |
| rosa_rugosa | Rorug06G0155300 Rorug06G0155400 Rorug06G0155500 Rorug06G0155600 Rorug07G0086300 |
| rosa_samantha | Rh6AG267500 Rh6BG174200 Rh6BG270000 Rh6DG263400 Rh7AG217000 Rh7CG230200 Rh7DG224600 |
| rosa_wichuraiana | Rw6G023160 Rw7G018810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1249 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 839 |
| AccII | CGCG | 1 cut(s) | 453 |
| AciI | CCGC | 5 cut(s) | 55, 79, 96, 162, 165 |
| AclWI | GGATC | 3 cut(s) | 601, 973, 1008 |
| AcsI | RAATTY | 4 cut(s) | 423, 686, 740, 1067 |
| AcuI | CTGAAG | 1 cut(s) | 323 |
| AfaI | GTAC | 1 cut(s) | 110 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 37, 839, 869, 1016, 1208, 1412 |
| AflIII | ACRYGT | 1 cut(s) | 1441 |
| AgsI | TTSAA | 6 cut(s) | 235, 473, 641, 1114, 1411, 1540 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 77, 109 |
| Alw26I | GTCTC | 1 cut(s) | 946 |
| AlwI | GGATC | 3 cut(s) | 601, 973, 1008 |
| AoxI | GGCC | 2 cut(s) | 804, 1640 |
| ApaI | GGGCCC | 1 cut(s) | 1644 |
| ApeKI | GCWGC | 2 cut(s) | 1346, 1576 |
| ApoI | RAATTY | 4 cut(s) | 423, 686, 740, 1067 |
| AspLEI | GCGC | 1 cut(s) | 161 |
| AspS9I | GGNCC | 4 cut(s) | 40, 654, 1640, 1641 |
| AsuC2I | CCSGG | 1 cut(s) | 148 |
| AsuHPI | GGTGA | 6 cut(s) | 108, 550, 554, 838, 884, 1187 |
| AvaII | GGWCC | 2 cut(s) | 40, 654 |
| BaeGI | GKGCMC | 1 cut(s) | 1644 |
| BanI | GGYRCC | 1 cut(s) | 1249 |
| BanII | GRGCYC | 3 cut(s) | 303, 435, 1644 |
| BbvI | GCAGC | 2 cut(s) | 1333, 1563 |
| BccI | CCATC | 3 cut(s) | 1052, 1142, 1606 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 27 |
| BcnI | CCSGG | 1 cut(s) | 148 |
| BcoDI | GTCTC | 1 cut(s) | 946 |
| BfaI | CTAG | 2 cut(s) | 506, 917 |
| BfmI | CTRYAG | 1 cut(s) | 1155 |
| BfoI | RGCGCY | 1 cut(s) | 162 |
| BisI | GCNGC | 5 cut(s) | 79, 162, 165, 1347, 1577 |
| BlsI | GCNGC | 5 cut(s) | 80, 163, 166, 1348, 1578 |
| Bme1390I | CCNGG | 1 cut(s) | 148 |
| Bme18I | GGWCC | 2 cut(s) | 40, 654 |
| BmgT120I | GGNCC | 4 cut(s) | 40, 654, 1640, 1641 |
| BmiI | GGNNCC | 6 cut(s) | 86, 300, 432, 1251, 1642, 1643 |
| BmrFI | CCNGG | 1 cut(s) | 148 |
| BmsI | GCATC | 5 cut(s) | 107, 538, 564, 574, 1498 |
| BpmI | CTGGAG | 2 cut(s) | 482, 1110 |
| BpuEI | CTTGAG | 2 cut(s) | 269, 404 |
| BpuMI | CCSGG | 1 cut(s) | 148 |
| BsaJI | CCNNGG | 1 cut(s) | 735 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 595, 625, 1011, 1041, 1143, 1173 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 37, 839, 869, 1016, 1208, 1412 |
| Bse1I | ACTGG | 4 cut(s) | 357, 378, 489, 657 |
| BseDI | CCNNGG | 1 cut(s) | 735 |
| BseGI | GGATG | 1 cut(s) | 553 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 37, 839, 869, 1016, 1208, 1412 |
| BseMII | CTCAG | 3 cut(s) | 561, 957, 1194 |
| BseNI | ACTGG | 4 cut(s) | 357, 378, 489, 657 |
| BseRI | GAGGAG | 4 cut(s) | 266, 401, 1107, 1139 |
| BseSI | GKGCMC | 1 cut(s) | 1644 |
| BseXI | GCAGC | 2 cut(s) | 1333, 1563 |
| BseYI | CCCAGC | 2 cut(s) | 302, 1230 |
| BsgI | GTGCAG | 1 cut(s) | 1562 |
| Bsh1236I | CGCG | 1 cut(s) | 453 |
| BshFI | GGCC | 2 cut(s) | 806, 1642 |
| BshNI | GGYRCC | 1 cut(s) | 1249 |
| BsiSI | CCGG | 2 cut(s) | 147, 530 |
| BslFI | GGGAC | 4 cut(s) | 645, 863, 1213, 1331 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 37, 839, 869, 1016, 1208, 1412 |
| BsmAI | GTCTC | 1 cut(s) | 946 |
| BsmFI | GGGAC | 4 cut(s) | 645, 863, 1213, 1331 |
| BsmI | GAATGC | 1 cut(s) | 323 |
| BsnI | GGCC | 2 cut(s) | 806, 1642 |
| Bsp120I | GGGCCC | 1 cut(s) | 1640 |
| Bsp1286I | GDGCHC | 3 cut(s) | 303, 435, 1644 |
| Bsp143I | GATC | 7 cut(s) | 133, 213, 262, 593, 978, 1000, 1278 |
| BspACI | CCGC | 5 cut(s) | 55, 79, 96, 162, 165 |
| BspANI | GGCC | 2 cut(s) | 806, 1642 |
| BspCNI | CTCAG | 3 cut(s) | 562, 956, 1195 |
| BspFNI | CGCG | 1 cut(s) | 453 |
| BspLI | GGNNCC | 6 cut(s) | 86, 300, 432, 1251, 1642, 1643 |
| BspPI | GGATC | 3 cut(s) | 601, 973, 1008 |
| BspQI | GCTCTTC | 1 cut(s) | 1566 |
| BspT107I | GGYRCC | 1 cut(s) | 1249 |
| BsrI | ACTGG | 4 cut(s) | 357, 378, 489, 657 |
| BssECI | CCNNGG | 1 cut(s) | 735 |
| BssMI | GATC | 7 cut(s) | 133, 213, 262, 593, 978, 1000, 1278 |
| Bst4CI | ACNGT | 8 cut(s) | 11, 93, 108, 440, 748, 826, 940, 1033 |
| Bst6I | CTCTTC | 2 cut(s) | 909, 1566 |
| BstC8I | GCNNGC | 2 cut(s) | 864, 1562 |
| BstDEI | CTNAG | 6 cut(s) | 122, 200, 570, 943, 1203, 1456 |
| BstDSI | CCRYGG | 1 cut(s) | 735 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 35 |
| BstF5I | GGATG | 1 cut(s) | 553 |
| BstFNI | CGCG | 1 cut(s) | 453 |
| BstH2I | RGCGCY | 1 cut(s) | 162 |
| BstHHI | GCGC | 1 cut(s) | 161 |
| BstKTI | GATC | 7 cut(s) | 136, 216, 265, 596, 981, 1003, 1281 |
| BstMAI | GTCTC | 1 cut(s) | 946 |
| BstMBI | GATC | 7 cut(s) | 133, 213, 262, 593, 978, 1000, 1278 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 526 |
| BstNSI | RCATGY | 1 cut(s) | 1445 |
| BstSCI | CCNGG | 1 cut(s) | 146 |
| BstSFI | CTRYAG | 1 cut(s) | 1155 |
| BstSLI | GKGCMC | 1 cut(s) | 1644 |
| BstUI | CGCG | 1 cut(s) | 453 |
| BstV1I | GCAGC | 2 cut(s) | 1333, 1563 |
| BstX2I | RGATCY | 2 cut(s) | 593, 978 |
| BstYI | RGATCY | 2 cut(s) | 593, 978 |
| BsuRI | GGCC | 2 cut(s) | 806, 1642 |
| BtgI | CCRYGG | 1 cut(s) | 735 |
| BtgZI | GCGATG | 1 cut(s) | 84 |
| BtsCI | GGATG | 1 cut(s) | 553 |
| BtsI | GCAGTG | 2 cut(s) | 313, 1251 |
| BtsIMutI | CAGTG | 6 cut(s) | 89, 313, 445, 744, 1038, 1251 |
| Cac8I | GCNNGC | 2 cut(s) | 864, 1562 |
| CfoI | GCGC | 1 cut(s) | 161 |
| Cfr13I | GGNCC | 4 cut(s) | 40, 654, 1640, 1641 |
| CseI | GACGC | 1 cut(s) | 576 |
| Csp6I | GTAC | 1 cut(s) | 109 |
| CviAII | CATG | 4 cut(s) | 1085, 1314, 1321, 1442 |
| CviQI | GTAC | 1 cut(s) | 109 |
| DdeI | CTNAG | 6 cut(s) | 122, 200, 570, 943, 1203, 1456 |
| DpnI | GATC | 7 cut(s) | 135, 215, 264, 595, 980, 1002, 1280 |
| DpnII | GATC | 7 cut(s) | 133, 213, 262, 593, 978, 1000, 1278 |
| DraI | TTTAAA | 2 cut(s) | 1074, 1426 |
| Eam1104I | CTCTTC | 2 cut(s) | 909, 1566 |
| EarI | CTCTTC | 2 cut(s) | 909, 1566 |
| Eco24I | GRGCYC | 3 cut(s) | 303, 435, 1644 |
| Eco47I | GGWCC | 2 cut(s) | 40, 654 |
| Eco57I | CTGAAG | 1 cut(s) | 323 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 35 |
| EcoO109I | RGGNCCY | 3 cut(s) | 40, 1640, 1641 |
| EcoRI | GAATTC | 1 cut(s) | 740 |
| EcoT38I | GRGCYC | 3 cut(s) | 303, 435, 1644 |
| FaeI | CATG | 4 cut(s) | 1088, 1317, 1324, 1445 |
| FaqI | GGGAC | 4 cut(s) | 645, 863, 1213, 1331 |
| FatI | CATG | 4 cut(s) | 1084, 1313, 1320, 1441 |
| Fnu4HI | GCNGC | 5 cut(s) | 79, 162, 165, 1347, 1577 |
| FokI | GGATG | 1 cut(s) | 560 |
| FriOI | GRGCYC | 3 cut(s) | 303, 435, 1644 |
| Fsp4HI | GCNGC | 5 cut(s) | 79, 162, 165, 1347, 1577 |
| FspBI | CTAG | 2 cut(s) | 506, 917 |
| GlaI | GCGC | 1 cut(s) | 160 |
| GluI | GCNGC | 5 cut(s) | 79, 162, 165, 1347, 1577 |
| GsaI | CCCAGC | 2 cut(s) | 306, 1234 |
| GsuI | CTGGAG | 2 cut(s) | 482, 1110 |
| HaeII | RGCGCY | 1 cut(s) | 162 |
| HaeIII | GGCC | 2 cut(s) | 806, 1642 |
| HapII | CCGG | 2 cut(s) | 147, 530 |
| HgaI | GACGC | 1 cut(s) | 576 |
| HhaI | GCGC | 1 cut(s) | 161 |
| Hin1II | CATG | 4 cut(s) | 1088, 1317, 1324, 1445 |
| Hin6I | GCGC | 1 cut(s) | 159 |
| HinP1I | GCGC | 1 cut(s) | 159 |
| HindIII | AAGCTT | 1 cut(s) | 197 |
| HinfI | GANTC | 3 cut(s) | 1006, 1226, 1310 |
| HpaII | CCGG | 2 cut(s) | 147, 530 |
| HphI | GGTGA | 6 cut(s) | 108, 550, 554, 838, 884, 1187 |
| Hpy166II | GTNNAC | 1 cut(s) | 654 |
| Hpy8I | GTNNAC | 1 cut(s) | 654 |
| HpyAV | CCTTC | 7 cut(s) | 53, 145, 796, 983, 989, 1010, 1618 |
| HpyCH4III | ACNGT | 8 cut(s) | 11, 93, 108, 440, 748, 826, 940, 1033 |
| HpyCH4V | TGCA | 9 cut(s) | 4, 628, 680, 773, 899, 1054, 1465, 1564, 1579 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 526 |
| HpyF3I | CTNAG | 6 cut(s) | 122, 200, 570, 943, 1203, 1456 |
| Hsp92II | CATG | 4 cut(s) | 1088, 1317, 1324, 1445 |
| HspAI | GCGC | 1 cut(s) | 159 |
| Kzo9I | GATC | 7 cut(s) | 133, 213, 262, 593, 978, 1000, 1278 |
| LguI | GCTCTTC | 1 cut(s) | 1566 |
| LmnI | GCTCC | 7 cut(s) | 298, 334, 430, 466, 1019, 1126, 1151 |
| Lsp1109I | GCAGC | 2 cut(s) | 1333, 1563 |
| LweI | GCATC | 5 cut(s) | 107, 538, 564, 574, 1498 |
| MaeI | CTAG | 2 cut(s) | 506, 917 |
| MaeIII | GTNAC | 4 cut(s) | 60, 758, 1027, 1159 |
| MalI | GATC | 7 cut(s) | 135, 215, 264, 595, 980, 1002, 1280 |
| MboI | GATC | 7 cut(s) | 133, 213, 262, 593, 978, 1000, 1278 |
| MflI | RGATCY | 2 cut(s) | 593, 978 |
| MhlI | GDGCHC | 3 cut(s) | 303, 435, 1644 |
| MlyI | GAGTC | 2 cut(s) | 1015, 1235 |
| MseI | TTAA | 6 cut(s) | 210, 684, 972, 1073, 1425, 1605 |
| MspA1I | CMGCKG | 1 cut(s) | 81 |
| MspI | CCGG | 2 cut(s) | 147, 530 |
| MspR9I | CCNGG | 1 cut(s) | 148 |
| Mva1269I | GAATGC | 1 cut(s) | 323 |
| MvnI | CGCG | 1 cut(s) | 453 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 526 |
| NciI | CCSGG | 1 cut(s) | 148 |
| NdeII | GATC | 7 cut(s) | 133, 213, 262, 593, 978, 1000, 1278 |
| NlaIII | CATG | 4 cut(s) | 1088, 1317, 1324, 1445 |
| NlaIV | GGNNCC | 6 cut(s) | 86, 300, 432, 1251, 1642, 1643 |
| NmuCI | GTSAC | 2 cut(s) | 60, 1159 |
| NspI | RCATGY | 1 cut(s) | 1445 |
| PciI | ACATGT | 1 cut(s) | 1441 |
| PciSI | GCTCTTC | 1 cut(s) | 1566 |
| PctI | GAATGC | 1 cut(s) | 323 |
| PfeI | GAWTC | 1 cut(s) | 1310 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 839 |
| PkrI | GCNGC | 5 cut(s) | 80, 163, 166, 1348, 1578 |
| PleI | GAGTC | 2 cut(s) | 1014, 1234 |
| PpsI | GAGTC | 2 cut(s) | 1014, 1234 |
| PpuMI | RGGWCCY | 1 cut(s) | 40 |
| PscI | ACATGT | 1 cut(s) | 1441 |
| Psp5II | RGGWCCY | 1 cut(s) | 40 |
| PspFI | CCCAGC | 2 cut(s) | 302, 1230 |
| PspN4I | GGNNCC | 6 cut(s) | 86, 300, 432, 1251, 1642, 1643 |
| PspOMI | GGGCCC | 1 cut(s) | 1640 |
| PspPI | GGNCC | 4 cut(s) | 40, 654, 1640, 1641 |
| PspPPI | RGGWCCY | 1 cut(s) | 40 |
| PsuI | RGATCY | 2 cut(s) | 593, 978 |
| RsaI | GTAC | 1 cut(s) | 110 |
| RsaNI | GTAC | 1 cut(s) | 109 |
| SapI | GCTCTTC | 1 cut(s) | 1566 |
| SaqAI | TTAA | 6 cut(s) | 210, 684, 972, 1073, 1425, 1605 |
| SatI | GCNGC | 5 cut(s) | 79, 162, 165, 1347, 1577 |
| Sau3AI | GATC | 7 cut(s) | 133, 213, 262, 593, 978, 1000, 1278 |
| Sau96I | GGNCC | 4 cut(s) | 40, 654, 1640, 1641 |
| SchI | GAGTC | 2 cut(s) | 1015, 1235 |
| ScrFI | CCNGG | 1 cut(s) | 148 |
| SduI | GDGCHC | 3 cut(s) | 303, 435, 1644 |
| SfaNI | GCATC | 5 cut(s) | 107, 538, 564, 574, 1498 |
| SfcI | CTRYAG | 1 cut(s) | 1155 |
| SinI | GGWCC | 2 cut(s) | 40, 654 |
| SmlI | CTYRAG | 2 cut(s) | 248, 383 |
| SmoI | CTYRAG | 2 cut(s) | 248, 383 |
| SsiI | CCGC | 5 cut(s) | 55, 79, 96, 162, 165 |
| SspMI | CTAG | 2 cut(s) | 506, 917 |
| StyD4I | CCNGG | 1 cut(s) | 146 |
| TaaI | ACNGT | 8 cut(s) | 11, 93, 108, 440, 748, 826, 940, 1033 |
| TaqI | TCGA | 9 cut(s) | 172, 216, 360, 525, 702, 1262, 1281, 1362, 1446 |
| TauI | GCSGC | 3 cut(s) | 81, 164, 167 |
| TfiI | GAWTC | 1 cut(s) | 1310 |
| Tru1I | TTAA | 6 cut(s) | 210, 684, 972, 1073, 1425, 1605 |
| Tru9I | TTAA | 6 cut(s) | 210, 684, 972, 1073, 1425, 1605 |
| TscAI | CASTG | 6 cut(s) | 96, 313, 445, 751, 1038, 1251 |
| TseFI | GTSAC | 2 cut(s) | 60, 1159 |
| TseI | GCWGC | 2 cut(s) | 1346, 1576 |
| Tsp45I | GTSAC | 2 cut(s) | 60, 1159 |
| TspDTI | ATGAA | 6 cut(s) | 435, 812, 896, 1029, 1181, 1337 |
| TspRI | CASTG | 6 cut(s) | 96, 313, 445, 751, 1038, 1251 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 839 |
| VpaK11BI | GGWCC | 2 cut(s) | 40, 654 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 35 |
| XapI | RAATTY | 4 cut(s) | 423, 686, 740, 1067 |
| XbaI | TCTAGA | 1 cut(s) | 916 |
| XceI | RCATGY | 1 cut(s) | 1445 |
| XspI | CTAG | 2 cut(s) | 506, 917 |