Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0004317

Physical Location & Seq

Genomic Coordinates Reverse (-)

21957175 .. 21961862

Gene Structure 4688 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G258800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4047 bp

ATGGACGCCTCCAAGCTTTCTGCTTTAGAAGAGGTTCAGCACCTCACAAACTCATCAGATAATGACGAGAAATTTAATGGTGGGCGTGGTGACGGTAGTGATGGTGGGTCTGAGACTGAGGGGTTTGTGAGTGGGGAAGAGGATTTTGATTCCGAGAGGGCATTTGTGAGAGGCTTAGATAAAGAAACCGTAGTTAAAGCTATTGCAGGGGAAGAAGAGTCCCCAGTCAAGTTTGTCAATTCTTCGGAATTTTTCTATCCCAGTAGCCAGAGGCCGATTGCCAAGGTCTCAGTGGATGATGATGATGATGATGATGATGCTGGGGATTCGAAATATGATGTTTTGGGGGCTGAGGATGTGGTCAGGGAGTCTTTTGTTACTGATAGGGATTTGAAGACTGTTGGGGGTGAGAGTTCTGTGGATAACTTGGGAATGAACGGTGAGATTTTGGTGGATACTCATTCGGGCAAGAATGCAAATTTTGGTGAATTGGTGAAAGAAAATGGTGTAAGTGGTGGCCAAGGGCATGTTGTTGATGCCTTGGTAGGCGGTGAAGTAGATAAGGAGCTTGAGAAATCGAAATTTGTTGAGGGTGTAGGCTCTGTGGTTGAGGGAAGTTCGGTGCCGGAGACGCAATTGGAGGTGACCGAAATAGAAAATAAGAAGGCTGTAGAGTCTAAGGAAGGCGATGTACTCAATGGCACATCAGAAGTTGAAATAGAGAGTAAAGGGAATGGTGGAGTGGTTGAAGAAGACAGTACAGTTTTGGGTGGTGTTGATGAGAAAGAGAACTCTTTGATTGTAGAACTAGCTGATGATAAGTTGGCTGAAAAGGATGGTGTTGATTCCGAGTCTGACAGAGTGGCAGTTGCTGAGTCTGGGAATGTGGAAGTTCATGGACAGAAAGATGTTGTTGCTGGTGCTGATGAAGTTGGTTTCGAGAAGAGGCCAGAAAGAGAAGATGAACTAAAATCTGATTCTGAAAGTAGACAGAAAGGGCTCACGACAGAGCTAGATACTGATGAAGTAGAAGTGGTGTCAGGTGACGAACCTTTTGTAGGGGATGGAGCTGAAACCCAAAGTGTGAACTGTGCTTCTGATTTAGCACAACATGAACCGGCGGATAAGGCAAGACCAGCTAATTCTAATTTTGGTGTACATGATCAAGTGGATGAATTGGAAGCCGCAGTCTCTGTAAAATCTTTGGCCCCTGAGTTTGTGGAACCGAGTTCCACTAACCAAGAAATAAAGCTAGAAGAGGAAGTTCAGAAGAAGCATTTCCTGGATGAAGGTGGCAATGAATCGGTGAATGCAAATTCCATTTTGGACCGAGAGATAAAGGTAGAAACCGAAGATGATGATAATGATCTTCAAGATGATGATAAGGATCTTCAAGATGATGATGATGATGATGATAAGGATCTCCAAGATGATGAAGGAGAGAATGAAGGTTCAATAGCAGATGGTAACAAGGAAGGTATGATCTTTGGAAGCTCTGAAGCTGATAAACAATTCTTGGAAGAATTGGAACGAGGATCAGGTACTGGTTCTTACTCAGGTGCTGAGAGTTATCATGATCATTCACAGAGAATTGATGGCCAGATTGTCACAGACTCGGATGAAGAAGTGGACACTGACGAGGAAGGGGGTGGAAAAGAGTTATTTGATGCTGCTTCACTGGCAGCTCTTCTGAAAGCATCAACAGCTGCTCCCTCAGATGGTGGCAATGTTACAATTACCACCTCAGATGGATCCCGGCTTTTCTCCATTGAGCGTCCTGCTGGTTTGGGATCTTCAATCCGCTCTTTGAAACCTGCTTCACGACCAAACAATTCTAATCTCTTTACATCTTCAAATGTCACAGTTGGGGGAGAATCTGAGAACAACTTGAGTGACGAAGAGAAAGCGAAACTGGAAAAGTTTCAACAGATAAGGGTTCAATTCTTGAGGCTTGTTCAGAGATTAGGTGTTTCTACAGAAGATTCAGTAGCTAGGCAGGTTCTATACCGCCTAGCTCTTCTTTCGGGGAGGCAAAACAGTCGAGAATTTAGCCCCGATGCTGCGAAGATGACAGCTCTCCAGCTTGAAGCAGAGGGGAAAGATGATTTGAATTTCTCCTTGAACATACTGGTTCTTGGGAAAACGGGTGTTGGGAAGAGTGCTACTATAAATTCAATTTTTGGTGAAGAAAAGACCCCAATTTATGCATTTGGACCTGCAACAACTACTGTCAAAGAAATTGTTGGAGTGGTCGATGGAGTCAAGATTAGGGTTTTTGATACACCAGGTCTTAAATCTGCTGCAATGGAACAGAATGTAAATCGTAAAATCTTATCCTTTGTACAGAAGTTCACGAAAAAATGCCCCCCAGATATTGTCCTCTATGTGGATCGGTTGGATACCCAAAGTAGGGATCTAAATGATGTGCCATTATTGAGATCAATTACTAGTGCCTTTGGTCCTTCAATTTGGAGAAGTACCATAGTCACTCTAACCCATGGCGCTTCTGCTCCTCCTGATGGACCATCAGGTTCCCCTCTGAATTATGAGTTGTTTGTTGCTCAGCGGTCTCAGATCCTCCAGCAGACCATTGGACAAGCTGTTGGTGATCTAAGGTTTATGAGTCCAAGTATGATAAGTCCAATATGTCTTGTAGAGAACCACCCCTCTTGTCGGAAGAATAGAGATGGTCAGAAAGTGCTCCCTAATGGTCAAAGTTGGAGACCCCAGCTATTGCTTTTAAGCTACTCTATGAAGATTTTATCTGAGGCGACTAATCTCTCAAAACCTCAGGAATCATTTGATAACCGTAAGCTCTTTGGTTTCCGTTCCCGTTCACCTCCTCTTCCATACTTGTTGAATTGGCTGTTGCAGCCTCGCCCCCATCCAAAGCTGTCTGCTGATCAAGAGAATGCTGATTCAGACATCGACTTGGATGACTTGTCCGATTCTGATCAAGAGGAAGAAGAGGATGAGTATGATCAGCTTCCATCATTCAAGCCTCTCAAGAAAGCTCAGATTGCTAAGCTTAGCAAAGAGCAGAGGAAGGCGTACACTGAGGAGTACGATTATAGGGTTAAGCTCCTCCAGAAGAAGATGTGGAGAGAAGAGTTGAGAAGAATGAAAGAAATGAAGAAGAAGGGTAAGGTTAGTGCAGATGATTATGGTTATCTGGGTGAAGAAGATCCAGAAAATGGTGGTCCAGCAGCTGTTCCCGTACCTTTACCTGATATGGTTCTGCCGCCTTCTTTTGATAGTGAAAATCCAGCTTACAGGTACCGCTTATTGGATTCAACTTCTCAGTTATCGGCAAGGGCAGTATTGGATGTCCAAGGGTGGGACCACGACTGCGGGTATGATGGTGTCAACCTTGAACAAAGTCTAGCCATTGCTAATTCTTTTCCGGCAGCTGTTACTGTTCAGCTTACTAAGGATAAGAAATATTTCACTATGCATTTGGATTCCTCAGTTGCTGCTAAGCATGGGGAGAATGGATCAAGTATGGTAGGCTTTGACATTCAAAACATTGGAAAGCAATTTGCATACATTGTCAGAGGAGACACCAAATTCAAAAATTTCAAGAGGAACAAGACAGGTGCCGGAGTAGCTGTGACATTTTTAGGTGAAAGTGTGTCCACTGGACTCAAAGTTGAGGACCAGATTGCACTTGGCAAGCGTGTGATATTGGTTGGTACTGCTGGGAGTGTCCGATCGCAGGGCGAATCGGTACATGGAGCGAATTTGGAGATGCGGTTGAGGGAAGCAGATTATCCAATTGGCCAAGATCAATCCTCAGTTGGTCTGTCCCTAGTGAAGTATAGGGGTGACTTGGCCTTGATGGTAAATCTTGTGTCCCAGTTTTCCCTTGGGCGAAACTACAAGATGACTGTTCGTGCAGGAGTGAACAACAAGCTGAGTGGACAGATTTCTGTTAGAACAAGCAGCTCTGAACAACTTCAAATTGCGCTCGTGGCTGTTCTTCCGATTGTTAGGGCCATATGCAACACTATCTGGCCCGGAGCCAGTGAGAATTACTCAATCTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003924 GO:0004888 GO:0004930 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006605 GO:0006810 GO:0006886 GO:0007154 GO:0007165 GO:0007186 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009707 GO:0009941 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017038 GO:0017111 GO:0019867 GO:0023052 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0038023 GO:0042170 GO:0042886 GO:0043021 GO:0043024 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0050896 GO:0051087 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055085 GO:0060089 GO:0061927 GO:0065002 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AIG1 TOC159_MAD

Protein Analysis

1349

Amino Acids

146.65

Weight (kDa)

4.55

Isoelectric Point (pI)

41.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02482 AT4G02510 AT4G02510 AT4G02510 AT4G02510
fragaria_vesca	FvH4_2g25480
malus_domestica	MD03G1285700.v1.1 MD11G1305100.v1.1
prunus_persica	Prupe.8G258800_v2.0.a1 Prupe.8G258800_v2.0.a1
pyrus_communis	pycom03g22640 pycom11g26690
rosa_chinensis	RchiOBHm_Chr6g0293691
rosa_laevigata	RLG00000011932
rosa_multiflora	Rmu_co8307375.1_g000001 Rmu_co8497971.1_g000001 Rmu_sc0005431.1_g000009
rosa_roxburghii	Rroxscaffold_7G00173980
rosa_rugosa	Rorug06G0237500 Rorug06G0237500
rosa_samantha	Rh4AG062400 Rh4AG063400 Rh4AG067300 Rh4BG061800 Rh4CG068100 Rh4DG056700 Rh6AG350100 Rh6BG357600 Rh6CG364400 Rh6DG351300
rosa_wichuraiana	Rw0G022990 Rw6G030480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	1822, 1987, 2224
Acc65I	GGTACC	1 cut(s)	3276
AccB1I	GGYRCC	3 cut(s)	622, 3276, 3596
AccB7I	CCANNNNNTGG	1 cut(s)	3194
AccBSI	CCGCTC	1 cut(s)	1803
AccI	GTMKAC	1 cut(s)	988
AcoI	YGGCCR	3 cut(s)	517, 1597, 3778
AcuI	CTGAAG	1 cut(s)	1518
AcyI	GRCGYC	1 cut(s)	6
AhlI	ACTAGT	1 cut(s)	2447
AjnI	CCWGG	2 cut(s)	1281, 2284
Alw21I	GWGCWC	1 cut(s)	2703
Alw26I	GTCTC	7 cut(s)	107, 292, 623, 1195, 2574, 2716, 3552
AlwNI	CAGNNNCTG	6 cut(s)	872, 1193, 1544, 1562, 3209, 3473
AoxI	GGCC	9 cut(s)	272, 517, 947, 1206, 1597, 3778, 3831, 3993, 4013
ArsI	GACNNNNNNTTYG	2 cut(s)	1037, 1069
Asp700I	GAANNNNTTC	5 cut(s)	33, 1277, 1920, 3443, 3954
Asp718I	GGTACC	1 cut(s)	3276
AspLEI	GCGC	2 cut(s)	2504, 3967
AsuC2I	CCSGG	2 cut(s)	1756, 4017
AsuII	TTCGAA	1 cut(s)	329
AvaII	GGWCC	7 cut(s)	1327, 2213, 2459, 2522, 3200, 3340, 3655
AxyI	CCTNAGG	1 cut(s)	2790
BalI	TGGCCA	3 cut(s)	519, 1599, 3780
BamHI	GGATCC	1 cut(s)	1751
BanI	GGYRCC	3 cut(s)	622, 3276, 3596
BanII	GRGCYC	1 cut(s)	1002
BarI	GAAGNNNNNNTAC	2 cut(s)	675, 707
BauI	CACGAG	1 cut(s)	3968
BbsI	GAAGAC	2 cut(s)	401, 759
Bbv12I	GWGCWC	1 cut(s)	2703
BbvCI	CCTCAGC	1 cut(s)	351
BcgI	CGANNNNNNTGC	2 cut(s)	2021, 2055
BciT130I	CCWGG	2 cut(s)	1283, 2286
BciVI	GTATCC	2 cut(s)	448, 2392
BclI	TGATCA	5 cut(s)	1162, 1576, 2902, 2953, 2980
BcnI	CCSGG	2 cut(s)	1756, 4017
BcoDI	GTCTC	7 cut(s)	107, 292, 623, 1195, 2574, 2716, 3552
BcuI	ACTAGT	1 cut(s)	2447
BfaI	CTAG	9 cut(s)	809, 1013, 1253, 1992, 2012, 2448, 3383, 3809, 4045
BfmI	CTRYAG	2 cut(s)	669, 1974
BfoI	RGCGCY	1 cut(s)	2505
BfuAI	ACCTGC	3 cut(s)	1822, 1987, 2224
BfuI	GTATCC	2 cut(s)	448, 2392
BlpI	GCTNAGC	4 cut(s)	2562, 3024, 3029, 3477
Bme1390I	CCNGG	4 cut(s)	1283, 1756, 2286, 4017
Bme18I	GGWCC	7 cut(s)	1327, 2213, 2459, 2522, 3200, 3340, 3655
BmiI	GGNNCC	9 cut(s)	624, 1209, 1224, 1753, 2533, 3278, 3341, 3598, 4021
BmrFI	CCNGG	4 cut(s)	1283, 1756, 2286, 4017
BmrI	ACTGGG	3 cut(s)	218, 255, 3850
BmsI	GCATC	6 cut(s)	307, 526, 1657, 1706, 2047, 3738
BmuI	ACTGGG	3 cut(s)	218, 255, 3850
BpiI	GAAGAC	2 cut(s)	401, 759
BplI	GAGNNNNNCTC	1 cut(s)	4019
BpmI	CTGGAG	3 cut(s)	2063, 2564, 3071
Bpu10I	CCTNAGC	1 cut(s)	351
Bpu1102I	GCTNAGC	4 cut(s)	2562, 3024, 3029, 3477
Bpu14I	TTCGAA	1 cut(s)	329
BpuEI	CTTGAG	4 cut(s)	590, 1909, 1966, 2990
BpuMI	CCSGG	2 cut(s)	1756, 4017
BsaBI	GATNNNNATC	4 cut(s)	1365, 1386, 1419, 2952
BsaHI	GRCGYC	1 cut(s)	6
BsaI	GGTCTC	3 cut(s)	292, 2574, 2716
BsaJI	CCNNGG	6 cut(s)	282, 520, 540, 2497, 3331, 3865
BsaXI	ACNNNNNCTCC	6 cut(s)	1693, 1723, 3594, 3624, 3737, 3767
Bse118I	RCCGGY	1 cut(s)	1117
Bse1I	ACTGG	9 cut(s)	224, 261, 1549, 1683, 1917, 2133, 3643, 3856, 4023
Bse21I	CCTNAGG	1 cut(s)	2790
Bse3DI	GCAATG	4 cut(s)	1303, 1732, 2310, 3387
Bse8I	GATNNNNATC	4 cut(s)	1365, 1386, 1419, 2952
BseBI	CCWGG	2 cut(s)	1283, 2286
BseDI	CCNNGG	6 cut(s)	282, 520, 540, 2497, 3331, 3865
BseJI	GATNNNNATC	4 cut(s)	1365, 1386, 1419, 2952
BseMI	GCAATG	4 cut(s)	1303, 1732, 2310, 3387
BseNI	ACTGG	9 cut(s)	224, 261, 1549, 1683, 1917, 2133, 3643, 3856, 4023
BseRI	GAGGAG	5 cut(s)	2502, 2832, 3074, 3074, 3570
BseYI	CCCAGC	3 cut(s)	320, 2727, 3698
BsgI	GTGCAG	2 cut(s)	3174, 3915
Bsh1285I	CGRYCG	1 cut(s)	3713
BshFI	GGCC	9 cut(s)	274, 519, 949, 1208, 1599, 3780, 3833, 3995, 4015
BshNI	GGYRCC	3 cut(s)	622, 3276, 3596
BsiEI	CGRYCG	1 cut(s)	3713
BsiHKAI	GWGCWC	1 cut(s)	2703
BsiSI	CCGG	6 cut(s)	626, 1118, 1756, 3404, 3600, 4017
BslFI	GGGAC	4 cut(s)	205, 3353, 3790, 3838
BsmAI	GTCTC	7 cut(s)	107, 292, 623, 1195, 2574, 2716, 3552
BsmBI	CGTCTC	1 cut(s)	623
BsmFI	GGGAC	4 cut(s)	205, 3353, 3790, 3838
BsmI	GAATGC	3 cut(s)	478, 1315, 2917
BsnI	GGCC	9 cut(s)	274, 519, 949, 1208, 1599, 3780, 3833, 3995, 4015
Bso31I	GGTCTC	3 cut(s)	292, 2574, 2716
Bsp119I	TTCGAA	1 cut(s)	329
Bsp1286I	GDGCHC	2 cut(s)	1002, 2703
Bsp1407I	TGTACA	2 cut(s)	1156, 2341
Bsp1720I	GCTNAGC	4 cut(s)	2562, 3024, 3029, 3477
Bsp19I	CCATGG	1 cut(s)	2497
BspANI	GGCC	9 cut(s)	274, 519, 949, 1208, 1599, 3780, 3833, 3995, 4015
BspHI	TCATGA	1 cut(s)	1573
BspLI	GGNNCC	9 cut(s)	624, 1209, 1224, 1753, 2533, 3278, 3341, 3598, 4021
BspMI	ACCTGC	3 cut(s)	1822, 1987, 2224
BspQI	GCTCTTC	2 cut(s)	1692, 2022
BspT104I	TTCGAA	1 cut(s)	329
BspT107I	GGYRCC	3 cut(s)	622, 3276, 3596
BspTNI	GGTCTC	3 cut(s)	292, 2574, 2716
BsrBI	CCGCTC	1 cut(s)	1803
BsrDI	GCAATG	4 cut(s)	1303, 1732, 2310, 3387
BsrFI	RCCGGY	1 cut(s)	1117
BsrGI	TGTACA	2 cut(s)	1156, 2341
BsrI	ACTGG	9 cut(s)	224, 261, 1549, 1683, 1917, 2133, 3643, 3856, 4023
BssAI	RCCGGY	1 cut(s)	1117
BssECI	CCNNGG	6 cut(s)	282, 520, 540, 2497, 3331, 3865
BssNI	GRCGYC	1 cut(s)	6
BssSI	CACGAG	1 cut(s)	3968
BssT1I	CCWWGG	6 cut(s)	282, 520, 540, 2497, 3331, 3865
Bst2BI	CACGAG	1 cut(s)	3968
Bst2UI	CCWGG	2 cut(s)	1283, 2286
BstACI	GRCGYC	1 cut(s)	6
BstAUI	TGTACA	2 cut(s)	1156, 2341
BstBI	TTCGAA	1 cut(s)	329
BstC8I	GCNNGC	1 cut(s)	3674
BstDSI	CCRYGG	1 cut(s)	2497
BstEII	GGTNACC	1 cut(s)	643
BstENI	CCTNNNNNAGG	1 cut(s)	1056
BstH2I	RGCGCY	1 cut(s)	2505
BstHHI	GCGC	2 cut(s)	2504, 3967
BstMAI	GTCTC	7 cut(s)	107, 292, 623, 1195, 2574, 2716, 3552
BstMCI	CGRYCG	1 cut(s)	3713
BstMWI	GCNNNNNNNGC	9 cut(s)	631, 1127, 1136, 1679, 1703, 2872, 3020, 3605, 3971
BstNI	CCWGG	2 cut(s)	1283, 2286
BstNSI	RCATGY	1 cut(s)	530
BstPI	GGTNACC	1 cut(s)	643
BstSCI	CCNGG	4 cut(s)	1281, 1754, 2284, 4015
BstSFI	CTRYAG	2 cut(s)	669, 1974
BstV2I	GAAGAC	2 cut(s)	401, 759
BstX2I	RGATCY	7 cut(s)	1387, 1420, 1751, 1790, 2413, 2574, 3184
BstYI	RGATCY	7 cut(s)	1387, 1420, 1751, 1790, 2413, 2574, 3184
Bsu36I	CCTNAGG	1 cut(s)	2790
BsuI	GTATCC	2 cut(s)	448, 2392
BsuRI	GGCC	9 cut(s)	274, 519, 949, 1208, 1599, 3780, 3833, 3995, 4015
BtgI	CCRYGG	1 cut(s)	2497
BtgZI	GCGATG	1 cut(s)	702
BtsIMutI	CAGTG	6 cut(s)	297, 1632, 1676, 3054, 3636, 4030
BveI	ACCTGC	3 cut(s)	1822, 1987, 2224
Cac8I	GCNNGC	1 cut(s)	3674
CaiI	CAGNNNCTG	6 cut(s)	872, 1193, 1544, 1562, 3209, 3473
CciI	TCATGA	1 cut(s)	1573
CfoI	GCGC	2 cut(s)	2504, 3967
Cfr10I	RCCGGY	1 cut(s)	1117
CseI	GACGC	3 cut(s)	14, 640, 1763
CsiI	ACCWGGT	1 cut(s)	2284
CspCI	CAANNNNNGTGG	4 cut(s)	2651, 2686, 3898, 3933
CviAII	CATG	8 cut(s)	527, 896, 1112, 1160, 1574, 2498, 3482, 3731
EaeI	YGGCCR	3 cut(s)	517, 1597, 3778
EciI	GGCGGA	1 cut(s)	1136
Eco130I	CCWWGG	6 cut(s)	282, 520, 540, 2497, 3331, 3865
Eco24I	GRGCYC	1 cut(s)	1002
Eco31I	GGTCTC	3 cut(s)	292, 2574, 2716
Eco47I	GGWCC	7 cut(s)	1327, 2213, 2459, 2522, 3200, 3340, 3655
Eco57I	CTGAAG	1 cut(s)	1518
Eco81I	CCTNAGG	1 cut(s)	2790
Eco91I	GGTNACC	1 cut(s)	643
EcoNI	CCTNNNNNAGG	1 cut(s)	1056
EcoO65I	GGTNACC	1 cut(s)	643
EcoRII	CCWGG	2 cut(s)	1281, 2284
EcoT14I	CCWWGG	6 cut(s)	282, 520, 540, 2497, 3331, 3865
EcoT22I	ATGCAT	2 cut(s)	2209, 3456
EcoT38I	GRGCYC	1 cut(s)	1002
ErhI	CCWWGG	6 cut(s)	282, 520, 540, 2497, 3331, 3865
Esp3I	CGTCTC	1 cut(s)	623
FaeI	CATG	8 cut(s)	530, 899, 1115, 1163, 1577, 2501, 3485, 3734
FaqI	GGGAC	4 cut(s)	205, 3353, 3790, 3838
FatI	CATG	8 cut(s)	526, 895, 1111, 1159, 1573, 2497, 3481, 3730
FauI	CCCGC	1 cut(s)	3344
FauNDI	CATATG	1 cut(s)	3998
FbaI	TGATCA	5 cut(s)	1162, 1576, 2902, 2953, 2980
FblI	GTMKAC	1 cut(s)	988
FriOI	GRGCYC	1 cut(s)	1002
FspBI	CTAG	9 cut(s)	809, 1013, 1253, 1992, 2012, 2448, 3383, 3809, 4045
GlaI	GCGC	2 cut(s)	2503, 3966
GsaI	CCCAGC	3 cut(s)	324, 2731, 3702
GsuI	CTGGAG	3 cut(s)	2063, 2564, 3071
HaeII	RGCGCY	1 cut(s)	2505
HaeIII	GGCC	9 cut(s)	274, 519, 949, 1208, 1599, 3780, 3833, 3995, 4015
HapII	CCGG	6 cut(s)	626, 1118, 1756, 3404, 3600, 4017
HgaI	GACGC	3 cut(s)	14, 640, 1763
HhaI	GCGC	2 cut(s)	2504, 3967
Hin1I	GRCGYC	1 cut(s)	6
Hin1II	CATG	8 cut(s)	530, 899, 1115, 1163, 1577, 2501, 3485, 3734
Hin6I	GCGC	2 cut(s)	2502, 3965
HinP1I	GCGC	2 cut(s)	2502, 3965
HincII	GTYRAC	1 cut(s)	3367
HindII	GTYRAC	1 cut(s)	3367
HindIII	AAGCTT	2 cut(s)	14, 3026
HpaII	CCGG	6 cut(s)	626, 1118, 1756, 3404, 3600, 4017
HpyF10VI	GCNNNNNNNGC	9 cut(s)	631, 1127, 1136, 1679, 1703, 2872, 3020, 3605, 3971
Hsp92I	GRCGYC	1 cut(s)	6
Hsp92II	CATG	8 cut(s)	530, 899, 1115, 1163, 1577, 2501, 3485, 3734
HspAI	GCGC	2 cut(s)	2502, 3965
KpnI	GGTACC	1 cut(s)	3280
Ksp22I	TGATCA	5 cut(s)	1162, 1576, 2902, 2953, 2980
LguI	GCTCTTC	2 cut(s)	1692, 2022
LmnI	GCTCC	8 cut(s)	565, 1067, 1714, 2515, 2706, 3087, 3734, 4019
LweI	GCATC	6 cut(s)	307, 526, 1657, 1706, 2047, 3738
MabI	ACCWGGT	1 cut(s)	2284
MaeI	CTAG	9 cut(s)	809, 1013, 1253, 1992, 2012, 2448, 3383, 3809, 4045
MbiI	CCGCTC	1 cut(s)	1803
MfeI	CAATTG	2 cut(s)	635, 3774
MflI	RGATCY	7 cut(s)	1387, 1420, 1751, 1790, 2413, 2574, 3184
MhlI	GDGCHC	2 cut(s)	1002, 2703
MlsI	TGGCCA	3 cut(s)	519, 1599, 3780
MluNI	TGGCCA	3 cut(s)	519, 1599, 3780
MlyI	GAGTC	9 cut(s)	227, 377, 683, 860, 884, 1607, 2268, 2632, 3636
MmeI	TCCRAC	4 cut(s)	2224, 2376, 2654, 2699
Mox20I	TGGCCA	3 cut(s)	519, 1599, 3780
Mph1103I	ATGCAT	2 cut(s)	2209, 3456
MroXI	GAANNNNTTC	5 cut(s)	33, 1277, 1920, 3443, 3954
MscI	TGGCCA	3 cut(s)	519, 1599, 3780
MseI	TTAA	5 cut(s)	75, 195, 2292, 2741, 3078
Msp20I	TGGCCA	3 cut(s)	519, 1599, 3780
MspA1I	CMGCKG	4 cut(s)	1706, 2566, 3209, 3410
MspI	CCGG	6 cut(s)	626, 1118, 1756, 3404, 3600, 4017
MspR9I	CCNGG	4 cut(s)	1283, 1756, 2286, 4017
MunI	CAATTG	2 cut(s)	635, 3774
Mva1269I	GAATGC	3 cut(s)	478, 1315, 2917
MvaI	CCWGG	2 cut(s)	1283, 2286
MwoI	GCNNNNNNNGC	9 cut(s)	631, 1127, 1136, 1679, 1703, 2872, 3020, 3605, 3971
NciI	CCSGG	2 cut(s)	1756, 4017
NcoI	CCATGG	1 cut(s)	2497
NdeI	CATATG	1 cut(s)	3998
NlaIII	CATG	8 cut(s)	530, 899, 1115, 1163, 1577, 2501, 3485, 3734
NlaIV	GGNNCC	9 cut(s)	624, 1209, 1224, 1753, 2533, 3278, 3341, 3598, 4021
NmuCI	GTSAC	9 cut(s)	89, 643, 1043, 1606, 1858, 1892, 2485, 3610, 3824
NsiI	ATGCAT	2 cut(s)	2209, 3456
NspI	RCATGY	1 cut(s)	530
NspV	TTCGAA	1 cut(s)	329
PagI	TCATGA	1 cut(s)	1573
PciSI	GCTCTTC	2 cut(s)	1692, 2022
PctI	GAATGC	3 cut(s)	478, 1315, 2917
PdmI	GAANNNNTTC	5 cut(s)	33, 1277, 1920, 3443, 3954
PflMI	CCANNNNNTGG	1 cut(s)	3194
PfoI	TCCNGGA	1 cut(s)	1281
Ple19I	CGATCG	1 cut(s)	3713
PleI	GAGTC	9 cut(s)	226, 376, 682, 859, 883, 1607, 2267, 2631, 3636
PpsI	GAGTC	9 cut(s)	226, 376, 682, 859, 883, 1607, 2267, 2631, 3636
Psp6I	CCWGG	2 cut(s)	1281, 2284
PspEI	GGTNACC	1 cut(s)	643
PspFI	CCCAGC	3 cut(s)	320, 2727, 3698
PspGI	CCWGG	2 cut(s)	1281, 2284
PspN4I	GGNNCC	9 cut(s)	624, 1209, 1224, 1753, 2533, 3278, 3341, 3598, 4021
PstNI	CAGNNNCTG	6 cut(s)	872, 1193, 1544, 1562, 3209, 3473
PsuI	RGATCY	7 cut(s)	1387, 1420, 1751, 1790, 2413, 2574, 3184
PvuI	CGATCG	1 cut(s)	3713
PvuII	CAGCTG	3 cut(s)	1706, 3209, 3410
SapI	GCTCTTC	2 cut(s)	1692, 2022
SaqAI	TTAA	5 cut(s)	75, 195, 2292, 2741, 3078
SchI	GAGTC	9 cut(s)	227, 377, 683, 860, 884, 1607, 2268, 2632, 3636
ScrFI	CCNGG	4 cut(s)	1283, 1756, 2286, 4017
SduI	GDGCHC	2 cut(s)	1002, 2703
SexAI	ACCWGGT	1 cut(s)	2284
SfaNI	GCATC	6 cut(s)	307, 526, 1657, 1706, 2047, 3738
SfcI	CTRYAG	2 cut(s)	669, 1974
SfuI	TTCGAA	1 cut(s)	329
SinI	GGWCC	7 cut(s)	1327, 2213, 2459, 2522, 3200, 3340, 3655
SmlI	CTYRAG	4 cut(s)	569, 1888, 1945, 3005
SmoI	CTYRAG	4 cut(s)	569, 1888, 1945, 3005
SpeI	ACTAGT	1 cut(s)	2447
SspI	AATATT	1 cut(s)	3443
SspMI	CTAG	9 cut(s)	809, 1013, 1253, 1992, 2012, 2448, 3383, 3809, 4045
StyD4I	CCNGG	4 cut(s)	1281, 1754, 2284, 4015
StyI	CCWWGG	6 cut(s)	282, 520, 540, 2497, 3331, 3865
TaqI	TCGA	6 cut(s)	329, 578, 939, 2041, 2253, 2928
TaqII	GACCGA	2 cut(s)	662, 1344
TatI	WGTACW	4 cut(s)	691, 758, 1156, 2341
TauI	GCSGC	2 cut(s)	1187, 3244
Tru1I	TTAA	5 cut(s)	75, 195, 2292, 2741, 3078
Tru9I	TTAA	5 cut(s)	75, 195, 2292, 2741, 3078
TscAI	CASTG	6 cut(s)	297, 1639, 1683, 3061, 3643, 4030
TseFI	GTSAC	9 cut(s)	89, 643, 1043, 1606, 1858, 1892, 2485, 3610, 3824
Tsp45I	GTSAC	9 cut(s)	89, 643, 1043, 1606, 1858, 1892, 2485, 3610, 3824
TspGWI	ACGGA	1 cut(s)	2816
TspRI	CASTG	6 cut(s)	297, 1639, 1683, 3061, 3643, 4030
Van91I	CCANNNNNTGG	1 cut(s)	3194
VpaK11BI	GGWCC	7 cut(s)	1327, 2213, 2459, 2522, 3200, 3340, 3655
XagI	CCTNNNNNAGG	1 cut(s)	1056
XceI	RCATGY	1 cut(s)	530
XcmI	CCANNNNNNNNNTGG	4 cut(s)	289, 2588, 3665, 3863
XmiI	GTMKAC	1 cut(s)	988
XmnI	GAANNNNTTC	5 cut(s)	33, 1277, 1920, 3443, 3954
XspI	CTAG	9 cut(s)	809, 1013, 1253, 1992, 2012, 2448, 3383, 3809, 4045
Zsp2I	ATGCAT	2 cut(s)	2209, 3456

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.