Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_co8497971.1

Orthogroup ID

OG0004317

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 2743

Gene Structure 2743 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_co8497971.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2743 bp

ggaggaagaggagaagcactctcttgatgaaagtggcattgaatctttagaaccaagttccatttcacatcaagagatacgggttgaagctgaagatgatgatgaagatgatgacgataaggacgatgaaggggaaaatgatggaatgatatttgggagctctgcagctgccaaacaattcttggaagagttggaacgagaatcaggtactggttcttactcaggtgcagagagttacggtgaccgttctctgagttatcgtgatgattctcagagagttgatgggcagattgtgacagactcagatgaagaagtggacactgatgaagaagggggtggaaaagagttatttgattctgctgcattggcagctcttctgaaagcagcaacaggtggcgctgcgtcagatggtggcagtgtcacatttacctccccagatggatccaggcttttctctgtcgagcgtcctgctggtttgggatcctcaatgcggcctatgaaacctggtacacgaccaaacccttctactctattttccaatgctacagttgggggagatactgacaacagcttgagtgaagaagagaaaaagaaactggaaaaatttcagcagataagggttaagttcttaaggcttgttcagagattaggtgtatctacagaagattcaatagccaagcaggttctataccgcctagctcttgtttcaggaaggcaaaatagtcgtgagtttagccttgaagctgcaaagacaacagctcttgagcttgaagcagatcagaaagacgatcttgacttttccttgaacatactggttcttgggaaaacaggtgtggggaagagtgctactattaattctatttttggtgaagaaaagactccaatttatgccttcggaccagcaacaactactgtgaaagaaattgttggagtggtggatggaatcaagattagggtttttgatacaccaggtcttaaatctgctgcaatggaacaaaatgtaaaccgcaaaattttatcttctgtgcagaagttcacgaaaaaatgccccccagatattgtcctctatgtggatcggttggacacccaaagtagggatctaaatgatgtgccggtattaagatcaattactagtgcttttggctcttcaatttggcgaagtacaatagtcactctaacccatgctgcttctgctcctcctgatggaccatcgggctctcctctgaattatgagttgtttgttgctcagaggtcacagatcctccagcagaccattggacaagctattggggatataaggtttacaaatccaaatatgatgagtcctatatctcttgtagagaaccatccctcttgtcgaaagaatagagaaggtcagaaagtgctccctaatggtcaaagctggagacctcagctattgctcttgagctcttctatgaaggtcttagctgaggcaactaatctctcaaagcctgcagaaccatttgatcaccgaaaactatttggtttccgcacccgttcagctcctcttccatacttgttgtcttggctgctgcagtctcgtacccatccaaagctctctggtgatcaaggtggtgagaatgctgactcagatattgaattggctgacttgtccgattctgataatgaggaagaggaggatgagtatgatcagcttccatcattcaagcctctcaagaaatctcagattgctaagcttagcaaagagcagaagaaggcgtaccttgaggagtacgattacagggttaagctcctccagaagaagatgtggagagaagagttgaaaaggatgaaagaaatgaagaagggtaataaggctagtgcagacgagtatggttatctgggtgaagaagatccggaaaatgctggcccagcagctgtgccagttgcattacctgatatggttctgccaccttcttttgatagtgaaaatccagcttacaggtaccgcttcttggagccgacttctcagttcttggctaggccagtattggatgcccaaggttgggaccatgactgtgggtatgatggtgtcaatcttgaatacagtcaagccattgttaatacttttccagctactgttgctgttcaagttacaaaggacaagaaggagtttaatctccatttggattcttcagttgctgctaagcatggggagaatggatcaagtatggcaggttttgacattcaaaacattggaaagcaacttgcttacattgtcagaggagaaaccaaatggaaaaatttgaagaagaacaagactactgctggagtatccatgacatttttaggtgaaaatgtatccactggagtcaaaattgaggatcagattgccgttggcaagcgcctggtatttgtgggtagtgctggaactgtcagatctcagggtgactcggcatatggagccaatgtagaggtgcggttgagggaagcagattttccaattggccaggatcaatcatcattgggtctgtctctggtgaagtggaggggtgacttggccctgggggcaaatcttcagtcccagttttcccttggacgagactacaagatagctgttcgtgcaggattgaacaacaagcgcagcggacagatctcgattagaacaagcagctctgaacaacttcaaattgcacttgtggctgtcattccaatcgtaagatccatctataatcttatcttccctggagcttcactcagtgagaattactcaatctactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003924 GO:0004888 GO:0004930 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006605 GO:0006810 GO:0006886 GO:0007154 GO:0007165 GO:0007186 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009707 GO:0009941 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017038 GO:0017111 GO:0019867 GO:0023052 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0038023 GO:0042170 GO:0042886 GO:0043021 GO:0043024 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0050896 GO:0051087 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055085 GO:0060089 GO:0061927 GO:0065002 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AIG1 TOC159_MAD

Protein Analysis

913

Amino Acids

100.07

Weight (kDa)

5.03

Isoelectric Point (pI)

44.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02482 AT4G02510 AT4G02510 AT4G02510 AT4G02510
fragaria_vesca	FvH4_2g25480
malus_domestica	MD03G1285700.v1.1 MD11G1305100.v1.1
prunus_persica	Prupe.8G258800_v2.0.a1 Prupe.8G258800_v2.0.a1
pyrus_communis	pycom03g22640 pycom11g26690
rosa_chinensis	RchiOBHm_Chr6g0293691
rosa_laevigata	RLG00000011932
rosa_multiflora	Rmu_co8307375.1_g000001 Rmu_co8497971.1_g000001 Rmu_sc0005431.1_g000009
rosa_roxburghii	Rroxscaffold_7G00173980
rosa_rugosa	Rorug06G0237500 Rorug06G0237500
rosa_samantha	Rh4AG062400 Rh4AG063400 Rh4AG067300 Rh4BG061800 Rh4CG068100 Rh4DG056700 Rh6AG350100 Rh6BG357600 Rh6CG364400 Rh6DG351300
rosa_wichuraiana	Rw0G022990 Rw6G030480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	671, 2187
Acc65I	GGTACC	1 cut(s)	1966
AccB1I	GGYRCC	1 cut(s)	1966
AccIII	TCCGGA	1 cut(s)	1877
AciI	CCGC	7 cut(s)	491, 692, 1007, 1511, 1970, 2441, 2608
AcoI	YGGCCR	1 cut(s)	2468
AcsI	RAATTY	3 cut(s)	603, 1012, 2264
AcuI	CTGAAG	3 cut(s)	112, 2140, 2523
AdeI	CACNNNGTG	1 cut(s)	2721
AfaI	GTAC	7 cut(s)	209, 509, 1163, 1565, 1743, 1755, 1968
AfiI	CCNNNNNNNGG	8 cut(s)	490, 1070, 1093, 1094, 1203, 1976, 2026, 2027
AflII	CTTAAG	1 cut(s)	629
AhlI	ACTAGT	1 cut(s)	1131
AjnI	CCWGG	7 cut(s)	444, 503, 968, 2368, 2470, 2524, 2705
AjuI	GAANNNNNNNTTGG	2 cut(s)	47, 79
Alw21I	GWGCWC	3 cut(s)	162, 1387, 1431
Alw26I	GTCTC	4 cut(s)	1400, 1564, 2500, 2557
AlwNI	CAGNNNCTG	4 cut(s)	210, 1899, 2100, 2163
Aor13HI	TCCGGA	1 cut(s)	1877
AoxI	GGCC	5 cut(s)	492, 1889, 2004, 2468, 2521
ApoI	RAATTY	3 cut(s)	603, 1012, 2264
ArsI	GACNNNNNNTTYG	2 cut(s)	2526, 2558
AseI	ATTAAT	1 cut(s)	853
Asp700I	GAANNNNTTC	2 cut(s)	604, 2644
Asp718I	GGTACC	1 cut(s)	1966
AspLEI	GCGC	3 cut(s)	399, 2368, 2605
AspS9I	GGNCC	5 cut(s)	897, 1206, 1890, 2030, 2522
AvaII	GGWCC	3 cut(s)	897, 1206, 2030
BalI	TGGCCA	1 cut(s)	2470
BamHI	GGATCC	2 cut(s)	441, 480
BanI	GGYRCC	1 cut(s)	1966
BanII	GRGCYC	3 cut(s)	162, 1218, 1431
BarI	GAAGNNNNNNTAC	2 cut(s)	1725, 1757
Bbv12I	GWGCWC	3 cut(s)	162, 1387, 1431
BbvCI	CCTCAGC	2 cut(s)	1411, 1450
BceAI	ACGGC	1 cut(s)	2340
BcgI	CGANNNNNNTGC	4 cut(s)	450, 484, 705, 739
BciT130I	CCWGG	7 cut(s)	446, 505, 970, 2370, 2472, 2526, 2707
BciVI	GTATCC	2 cut(s)	2306, 2333
BclI	TGATCA	3 cut(s)	1487, 1586, 1670
BcoDI	GTCTC	4 cut(s)	1400, 1564, 2500, 2557
BcuI	ACTAGT	1 cut(s)	1131
BfaI	CTAG	5 cut(s)	696, 1132, 1840, 2002, 2741
BfmI	CTRYAG	5 cut(s)	163, 544, 658, 1474, 1554
BfoI	RGCGCY	2 cut(s)	400, 2369
BfrI	CTTAAG	1 cut(s)	629
BfuAI	ACCTGC	2 cut(s)	671, 2187
BfuI	GTATCC	2 cut(s)	2306, 2333
BglI	GCCNNNNNGGC	1 cut(s)	2529
BglII	AGATCT	2 cut(s)	2400, 2614
BlpI	GCTNAGC	3 cut(s)	1714, 1719, 2167
Bme1390I	CCNGG	7 cut(s)	446, 505, 970, 2370, 2472, 2526, 2707
Bme18I	GGWCC	3 cut(s)	897, 1206, 2030
BmgT120I	GGNCC	5 cut(s)	897, 1206, 1890, 2030, 2522
BmiI	GGNNCC	6 cut(s)	443, 482, 1968, 1981, 2031, 2426
BmrFI	CCNGG	7 cut(s)	446, 505, 970, 2370, 2472, 2526, 2707
BmrI	ACTGGG	1 cut(s)	2540
BmsI	GCATC	1 cut(s)	2006
BmuI	ACTGGG	1 cut(s)	2540
BplI	GAGNNNNNCTC	4 cut(s)	35, 2701, 2733, 2715
BpmI	CTGGAG	6 cut(s)	1248, 1424, 1761, 2311, 2350, 2728
Bpu10I	CCTNAGC	2 cut(s)	1411, 1450
Bpu1102I	GCTNAGC	3 cut(s)	1714, 1719, 2167
BpuEI	CTTGAG	5 cut(s)	593, 783, 1445, 1680, 1767
BsaI	GGTCTC	1 cut(s)	1400
BsaJI	CCNNGG	5 cut(s)	2021, 2524, 2525, 2555, 2705
BsaWI	WCCGGW	1 cut(s)	1877
BsaXI	ACNNNNNCTCC	6 cut(s)	1246, 1276, 1650, 1680, 2416, 2446
Bsc4I	CCNNNNNNNGG	8 cut(s)	490, 1070, 1093, 1094, 1203, 1976, 2026, 2027
Bse118I	RCCGGY	1 cut(s)	1112
Bse1I	ACTGG	7 cut(s)	215, 601, 817, 1905, 2007, 2333, 2546
Bse3DI	GCAATG	1 cut(s)	994
BseAI	TCCGGA	1 cut(s)	1877
BseBI	CCWGG	7 cut(s)	446, 505, 970, 2370, 2472, 2526, 2707
BseDI	CCNNGG	5 cut(s)	2021, 2524, 2525, 2555, 2705
BseGI	GGATG	6 cut(s)	944, 1346, 1568, 1667, 1816, 2021
BseLI	CCNNNNNNNGG	8 cut(s)	490, 1070, 1093, 1094, 1203, 1976, 2026, 2027
BseMI	GCAATG	1 cut(s)	994
BseNI	ACTGG	7 cut(s)	215, 601, 817, 1905, 2007, 2333, 2546
BseRI	GAGGAG	8 cut(s)	24, 1186, 1210, 1516, 1671, 1764, 1764, 2260
BseYI	CCCAGC	1 cut(s)	1892
BsgI	GTGCAG	4 cut(s)	247, 1047, 1864, 2605
BshFI	GGCC	5 cut(s)	494, 1891, 2006, 2470, 2523
BshNI	GGYRCC	1 cut(s)	1966
BsiHKAI	GWGCWC	3 cut(s)	162, 1387, 1431
BsiSI	CCGG	2 cut(s)	1113, 1878
BslFI	GGGAC	2 cut(s)	2043, 2528
BslI	CCNNNNNNNGG	8 cut(s)	490, 1070, 1093, 1094, 1203, 1976, 2026, 2027
BsmAI	GTCTC	4 cut(s)	1400, 1564, 2500, 2557
BsmFI	GGGAC	2 cut(s)	2043, 2528
BsmI	GAATGC	1 cut(s)	1607
BsnI	GGCC	5 cut(s)	494, 1891, 2006, 2470, 2523
Bso31I	GGTCTC	1 cut(s)	1400
Bsp1286I	GDGCHC	4 cut(s)	162, 1218, 1387, 1431
Bsp13I	TCCGGA	1 cut(s)	1877
Bsp1720I	GCTNAGC	3 cut(s)	1714, 1719, 2167
BspACI	CCGC	7 cut(s)	491, 692, 1007, 1511, 1970, 2441, 2608
BspANI	GGCC	5 cut(s)	494, 1891, 2006, 2470, 2523
BspEI	TCCGGA	1 cut(s)	1877
BspLI	GGNNCC	6 cut(s)	443, 482, 1968, 1981, 2031, 2426
BspMAI	CTGCAG	3 cut(s)	167, 1478, 1558
BspMI	ACCTGC	2 cut(s)	671, 2187
BspQI	GCTCTTC	3 cut(s)	379, 1151, 1436
BspT107I	GGYRCC	1 cut(s)	1966
BspTI	CTTAAG	1 cut(s)	629
BspTNI	GGTCTC	1 cut(s)	1400
BsrDI	GCAATG	1 cut(s)	994
BsrFI	RCCGGY	1 cut(s)	1112
BsrI	ACTGG	7 cut(s)	215, 601, 817, 1905, 2007, 2333, 2546
BssAI	RCCGGY	1 cut(s)	1112
BssECI	CCNNGG	5 cut(s)	2021, 2524, 2525, 2555, 2705
BssT1I	CCWWGG	2 cut(s)	2021, 2555
Bst2UI	CCWGG	7 cut(s)	446, 505, 970, 2370, 2472, 2526, 2707
Bst4CI	ACNGT	8 cut(s)	240, 246, 548, 914, 2040, 2070, 2102, 2396
Bst6I	CTCTTC	9 cut(s)	181, 379, 577, 834, 1151, 1436, 1534, 1648, 1792
BstAFI	CTTAAG	1 cut(s)	629
BstC8I	GCNNGC	3 cut(s)	1474, 1889, 2364
BstEII	GGTNACC	1 cut(s)	240
BstF5I	GGATG	6 cut(s)	944, 1346, 1568, 1667, 1816, 2021
BstH2I	RGCGCY	2 cut(s)	400, 2369
BstHHI	GCGC	3 cut(s)	399, 2368, 2605
BstMAI	GTCTC	4 cut(s)	1400, 1564, 2500, 2557
BstMWI	GCNNNNNNNGC	9 cut(s)	366, 369, 1191, 1893, 2103, 2424, 2529, 2583, 2661
BstNI	CCWGG	7 cut(s)	446, 505, 970, 2370, 2472, 2526, 2707
BstPI	GGTNACC	1 cut(s)	240
BstSCI	CCNGG	7 cut(s)	444, 503, 968, 2368, 2470, 2524, 2705
BstSFI	CTRYAG	5 cut(s)	163, 544, 658, 1474, 1554
BstX2I	RGATCY	8 cut(s)	441, 480, 1097, 1258, 1874, 2400, 2614, 2682
BstXI	CCANNNNNNTGG	1 cut(s)	2040
BstYI	RGATCY	8 cut(s)	441, 480, 1097, 1258, 1874, 2400, 2614, 2682
BsuI	GTATCC	2 cut(s)	2306, 2333
BsuRI	GGCC	5 cut(s)	494, 1891, 2006, 2470, 2523
BtsCI	GGATG	6 cut(s)	944, 1346, 1568, 1667, 1816, 2021
BtsI	GCAGTG	1 cut(s)	422
BtsIMutI	CAGTG	4 cut(s)	319, 422, 2326, 2726
BveI	ACCTGC	2 cut(s)	671, 2187
Cac8I	GCNNGC	3 cut(s)	1474, 1889, 2364
CaiI	CAGNNNCTG	4 cut(s)	210, 1899, 2100, 2163
CfoI	GCGC	3 cut(s)	399, 2368, 2605
Cfr10I	RCCGGY	1 cut(s)	1112
Cfr13I	GGNCC	5 cut(s)	897, 1206, 1890, 2030, 2522
CseI	GACGC	2 cut(s)	391, 453
CsiI	ACCWGGT	2 cut(s)	503, 968
Csp6I	GTAC	7 cut(s)	208, 508, 1162, 1564, 1742, 1754, 1967
CviAII	CATG	4 cut(s)	1182, 2034, 2172, 2300
CviQI	GTAC	7 cut(s)	208, 508, 1162, 1564, 1742, 1754, 1967
DraIII	CACNNNGTG	1 cut(s)	2721
EaeI	YGGCCR	1 cut(s)	2468
Eam1104I	CTCTTC	9 cut(s)	181, 379, 577, 834, 1151, 1436, 1534, 1648, 1792
EarI	CTCTTC	9 cut(s)	181, 379, 577, 834, 1151, 1436, 1534, 1648, 1792
Ecl136II	GAGCTC	2 cut(s)	160, 1429
Eco130I	CCWWGG	2 cut(s)	2021, 2555
Eco24I	GRGCYC	3 cut(s)	162, 1218, 1431
Eco31I	GGTCTC	1 cut(s)	1400
Eco47I	GGWCC	3 cut(s)	897, 1206, 2030
Eco53kI	GAGCTC	2 cut(s)	160, 1429
Eco57I	CTGAAG	3 cut(s)	112, 2140, 2523
Eco91I	GGTNACC	1 cut(s)	240
EcoICRI	GAGCTC	2 cut(s)	160, 1429
EcoO65I	GGTNACC	1 cut(s)	240
EcoRII	CCWGG	7 cut(s)	444, 503, 968, 2368, 2470, 2524, 2705
EcoT14I	CCWWGG	2 cut(s)	2021, 2555
EcoT38I	GRGCYC	3 cut(s)	162, 1218, 1431
ErhI	CCWWGG	2 cut(s)	2021, 2555
FaeI	CATG	4 cut(s)	1185, 2037, 2175, 2303
FalI	AAGNNNNNCTT	2 cut(s)	775, 807
FaqI	GGGAC	2 cut(s)	2043, 2528
FatI	CATG	4 cut(s)	1181, 2033, 2171, 2299
FauNDI	CATATG	1 cut(s)	2420
FbaI	TGATCA	3 cut(s)	1487, 1586, 1670
FokI	GGATG	6 cut(s)	951, 1333, 1555, 1674, 1823, 2028
FriOI	GRGCYC	3 cut(s)	162, 1218, 1431
FspBI	CTAG	5 cut(s)	696, 1132, 1840, 2002, 2741
GlaI	GCGC	3 cut(s)	398, 2367, 2604
GsaI	CCCAGC	1 cut(s)	1896
GsuI	CTGGAG	6 cut(s)	1248, 1424, 1761, 2311, 2350, 2728
HaeII	RGCGCY	2 cut(s)	400, 2369
HaeIII	GGCC	5 cut(s)	494, 1891, 2006, 2470, 2523
HapII	CCGG	2 cut(s)	1113, 1878
HgaI	GACGC	2 cut(s)	391, 453
HhaI	GCGC	3 cut(s)	399, 2368, 2605
Hin1II	CATG	4 cut(s)	1185, 2037, 2175, 2303
Hin6I	GCGC	3 cut(s)	397, 2366, 2603
HinP1I	GCGC	3 cut(s)	397, 2366, 2603
HindIII	AAGCTT	1 cut(s)	1716
HpaII	CCGG	2 cut(s)	1113, 1878
Hpy166II	GTNNAC	5 cut(s)	317, 510, 1004, 1036, 1303
Hpy8I	GTNNAC	5 cut(s)	317, 510, 1004, 1036, 1303
HpyCH4III	ACNGT	8 cut(s)	240, 246, 548, 914, 2040, 2070, 2102, 2396
HpyF10VI	GCNNNNNNNGC	9 cut(s)	366, 369, 1191, 1893, 2103, 2424, 2529, 2583, 2661
Hsp92II	CATG	4 cut(s)	1185, 2037, 2175, 2303
HspAI	GCGC	3 cut(s)	397, 2366, 2603
Kpn2I	TCCGGA	1 cut(s)	1877
KpnI	GGTACC	1 cut(s)	1970
Ksp22I	TGATCA	3 cut(s)	1487, 1586, 1670
LguI	GCTCTTC	3 cut(s)	379, 1151, 1436
LmnI	GCTCC	8 cut(s)	157, 1199, 1390, 1529, 1777, 1979, 2424, 2709
LweI	GCATC	1 cut(s)	2006
MabI	ACCWGGT	2 cut(s)	503, 968
MaeI	CTAG	5 cut(s)	696, 1132, 1840, 2002, 2741
MaeIII	GTNAC	9 cut(s)	234, 240, 293, 419, 1169, 1252, 2114, 2409, 2514
MfeI	CAATTG	1 cut(s)	2464
MflI	RGATCY	8 cut(s)	441, 480, 1097, 1258, 1874, 2400, 2614, 2682
MhlI	GDGCHC	4 cut(s)	162, 1218, 1387, 1431
MlsI	TGGCCA	1 cut(s)	2470
MluNI	TGGCCA	1 cut(s)	2470
MlyI	GAGTC	6 cut(s)	294, 872, 1331, 1602, 2341, 2406
MmeI	TCCRAC	3 cut(s)	172, 908, 1060
Mox20I	TGGCCA	1 cut(s)	2470
MroI	TCCGGA	1 cut(s)	1877
MroXI	GAANNNNTTC	2 cut(s)	604, 2644
MscI	TGGCCA	1 cut(s)	2470
MseI	TTAA	8 cut(s)	622, 630, 853, 976, 1119, 1768, 2083, 2137
MslI	CAYNNNNRTG	1 cut(s)	2038
Msp20I	TGGCCA	1 cut(s)	2470
MspA1I	CMGCKG	3 cut(s)	168, 1899, 2608
MspCI	CTTAAG	1 cut(s)	629
MspI	CCGG	2 cut(s)	1113, 1878
MspR9I	CCNGG	7 cut(s)	446, 505, 970, 2370, 2472, 2526, 2707
MunI	CAATTG	1 cut(s)	2464
Mva1269I	GAATGC	1 cut(s)	1607
MvaI	CCWGG	7 cut(s)	446, 505, 970, 2370, 2472, 2526, 2707
MwoI	GCNNNNNNNGC	9 cut(s)	366, 369, 1191, 1893, 2103, 2424, 2529, 2583, 2661
NdeI	CATATG	1 cut(s)	2420
NlaIII	CATG	4 cut(s)	1185, 2037, 2175, 2303
NlaIV	GGNNCC	6 cut(s)	443, 482, 1968, 1981, 2031, 2426
NmeAIII	GCCGAG	1 cut(s)	2394
NmuCI	GTSAC	7 cut(s)	240, 293, 419, 1169, 1252, 2409, 2514
PasI	CCCWGGG	1 cut(s)	2525
PciSI	GCTCTTC	3 cut(s)	379, 1151, 1436
PcsI	WCGNNNNNNNCGW	1 cut(s)	121
PctI	GAATGC	1 cut(s)	1607
PdmI	GAANNNNTTC	2 cut(s)	604, 2644
PfeI	GAWTC	8 cut(s)	42, 201, 267, 354, 666, 943, 1638, 2151
PleI	GAGTC	6 cut(s)	294, 872, 1330, 1602, 2340, 2406
PpsI	GAGTC	6 cut(s)	294, 872, 1330, 1602, 2340, 2406
PshBI	ATTAAT	1 cut(s)	853
Psp124BI	GAGCTC	2 cut(s)	162, 1431
Psp6I	CCWGG	7 cut(s)	444, 503, 968, 2368, 2470, 2524, 2705
PspEI	GGTNACC	1 cut(s)	240
PspFI	CCCAGC	1 cut(s)	1892
PspGI	CCWGG	7 cut(s)	444, 503, 968, 2368, 2470, 2524, 2705
PspN4I	GGNNCC	6 cut(s)	443, 482, 1968, 1981, 2031, 2426
PspPI	GGNCC	5 cut(s)	897, 1206, 1890, 2030, 2522
PstI	CTGCAG	3 cut(s)	167, 1478, 1558
PstNI	CAGNNNCTG	4 cut(s)	210, 1899, 2100, 2163
PsuI	RGATCY	8 cut(s)	441, 480, 1097, 1258, 1874, 2400, 2614, 2682
PvuII	CAGCTG	2 cut(s)	168, 1899
RsaI	GTAC	7 cut(s)	209, 509, 1163, 1565, 1743, 1755, 1968
RsaNI	GTAC	7 cut(s)	208, 508, 1162, 1564, 1742, 1754, 1967
RseI	CAYNNNNRTG	1 cut(s)	2038
SacI	GAGCTC	2 cut(s)	162, 1431
SapI	GCTCTTC	3 cut(s)	379, 1151, 1436
SaqAI	TTAA	8 cut(s)	622, 630, 853, 976, 1119, 1768, 2083, 2137
Sau96I	GGNCC	5 cut(s)	897, 1206, 1890, 2030, 2522
SchI	GAGTC	6 cut(s)	294, 872, 1331, 1602, 2341, 2406
ScrFI	CCNGG	7 cut(s)	446, 505, 970, 2370, 2472, 2526, 2707
SduI	GDGCHC	4 cut(s)	162, 1218, 1387, 1431
SexAI	ACCWGGT	2 cut(s)	503, 968
SfaNI	GCATC	1 cut(s)	2006
SfcI	CTRYAG	5 cut(s)	163, 544, 658, 1474, 1554
SinI	GGWCC	3 cut(s)	897, 1206, 2030
SmiMI	CAYNNNNRTG	1 cut(s)	2038
SmlI	CTYRAG	6 cut(s)	572, 629, 762, 1424, 1695, 1746
SmoI	CTYRAG	6 cut(s)	572, 629, 762, 1424, 1695, 1746
SpeI	ACTAGT	1 cut(s)	1131
SsiI	CCGC	7 cut(s)	491, 692, 1007, 1511, 1970, 2441, 2608
SspMI	CTAG	5 cut(s)	696, 1132, 1840, 2002, 2741
SstI	GAGCTC	2 cut(s)	162, 1431
StyD4I	CCNGG	7 cut(s)	444, 503, 968, 2368, 2470, 2524, 2705
StyI	CCWWGG	2 cut(s)	2021, 2555
TaaI	ACNGT	8 cut(s)	240, 246, 548, 914, 2040, 2070, 2102, 2396
TaqI	TCGA	3 cut(s)	460, 1358, 2619
TatI	WGTACW	1 cut(s)	1161
TauI	GCSGC	1 cut(s)	494
TfiI	GAWTC	8 cut(s)	42, 201, 267, 354, 666, 943, 1638, 2151
Tru1I	TTAA	8 cut(s)	622, 630, 853, 976, 1119, 1768, 2083, 2137
Tru9I	TTAA	8 cut(s)	622, 630, 853, 976, 1119, 1768, 2083, 2137
TscAI	CASTG	4 cut(s)	326, 422, 2333, 2726
TseFI	GTSAC	7 cut(s)	240, 293, 419, 1169, 1252, 2409, 2514
Tsp45I	GTSAC	7 cut(s)	240, 293, 419, 1169, 1252, 2409, 2514
TspDTI	ATGAA	9 cut(s)	43, 118, 142, 322, 340, 513, 1452, 1827, 1836
TspRI	CASTG	4 cut(s)	326, 422, 2333, 2726
Vha464I	CTTAAG	1 cut(s)	629
VpaK11BI	GGWCC	3 cut(s)	897, 1206, 2030
VspI	ATTAAT	1 cut(s)	853
XapI	RAATTY	3 cut(s)	603, 1012, 2264
XcmI	CCANNNNNNNNNTGG	3 cut(s)	179, 1272, 2553
XmnI	GAANNNNTTC	2 cut(s)	604, 2644
XspI	CTAG	5 cut(s)	696, 1132, 1840, 2002, 2741

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.