Rroxscaffold_7G00173980

translocase of chloroplast 159

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
13819256 .. 13825790
6535 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00173980.1

Sequence Viewer

Length: 4740 bp
ATGGACTCCTCCAAGCTCCCCGCTCCACAACTCCCTCTGCACTCTTCAGGTTCTTCTTCTTCTTCCTCCTCCGCTTCTTCTGTTTCCTCTGCTTCTTCCGACTCTGAAATTGATGTTAATTTAGCCAAAACCACTGTTTTGAAAATCGATGACGACGAAACTAATTCCGGTGGTGTTGGTGTTGGTGTTGGTGTTGGGCCAGGTCTGGGTAGTGACGGTGAGGAGGGGTTCGTCAGTGGGGAGGAGGATTTCGATCCTGGTTTGGATAGGGCGTTTGTCAGAGACGAACAACAAACCCTAGCTCCGGTGGAAGGGGAGGTAGTAGATAGTAGCAGCAAGGCTGTCAAATTTGTTAGTTCTTCCGACTTTTTCCTGAGGCCGATTGCCAAGGTCTCCGTGGATGATGATGACGGCGAAGAAGAAGAAGAAGAAGAAGAGAGGATTCGAAAGCCGGCGTGGAAGTGTTTAAGGAGTCTGTTGGGGTGGGTGAGAGTTCTGAGGTGGAGAAGGGTTTCAATTCCGAATGGTGTTGGTGGTGAAGTAGGGAAGTCGAAGGTTGCGGAGGGTTTAGGCTCTGTTTCTGTGGCTGAGATAGAGGATAAGAAGGTTGTAGAGCCTAAGGAGAGCCAGGTTGTTAATGGTACGGCAGAAGCTGTGAGGAAGAGTAGTGAGAATGGCTTGGTTGAGGAACGCGGTGTGCAGTTTACTGGTGACTCAGTTGTGCAAGCTGTGCATGTTGATTTGTCACACACAGGAGCAGCTGTTGTTGGCGATGTGGAGAAGATTGAGGAGTCTGAGATAAAAGGGTTGGAGGTCCCGGTAGGGGTGAGCTTGGATAGTGAGTTTGGTCAAATTAGCCGTGAGGTTGAAGAGCCGAAAGATTCAGTATTGGTTGCTGGGGAGTCTAAGTCTGACGGAGTGGTTGTTGCTGAACCAGCAGTTGATAAGTTGGTTGAAGAACATGGTGTTGATATCACTAGTGAAGGTGACTCAGTTGTGGAAGCTGCCCGCGTTGATTTGTCACAGACAGGAGCAGCTGTTGTTGGTGATGCGGAGAAGATTGAGGAATCTGCAATTAAAGGGTTGGAGGTTCCAGCAGGAGTGAGCTTGGAGAATGGAATTGATCAAATTGGCTGTGCTTCTGAATTGCCAAATGATTCAAAGTTGGTGGATGTGAACTCTGAGTCTGAAAAAGCAGCTGTTGCTGACCCAGCAGATGATAAGTTGGTTGAAGAACATGGTATGGATTTTACTAGCAAGGGCGATTCAGTTGTGCAAGCTGTTGATGTTGATTTGTCACAGACAGGAGAAGATGTGGAGAAGATTGAGGAATCTGAAATTAAAGTTCCAATAGGCACGAGCTTGGAGAATGGATTTGATCAAATTAGCCGTGATGTTGAATTGCAGTCCGAGTCTGACAAAGTGGTTGTTGCTGAGTCAGGGAATGTAGAGCAGAAAACTGTTGCTGCTGCTGCTGAGGAAGTAGATTTCCAGGAGAGAAAGGAGAAAGAACTTGAACTGAAGTCCAATGCTGCAACTGGACAGGAAGGGCCCACAATGGAGATAGGTGCTGCTGAAGTAAAAGTAGTGCCAGATGAAACCCAGTCTGTGAACCATGTTTCTGATATTAGTGTACTGAATGCACTCGAGAGTGCTGAAAAGAGTGCAACTGACCAAGAAATAAAATTAGAGGAGGAAGAGGAGAAGCACTCTCTTGATGAAAGTGGCATTGAATCTTTAGAACCAAGTTCCATTTCACATCAAGAGATAAGGGTTGAAGCTGAAGATGATGACGAAGATGATGACGATAAGGACGATGAAGGGGAAAATGATGGTATGATATTTGGGAGCTCTGCAGCTGCCAAACAATTCTTGGAAGAGTTGGAACGGGAATCAGGTACTGGTTCTTACTCAGGTGCAGAGAGTTACGGTGACCGTTCTCTGAGTTATCGTGATGATTCTCAGAGAGTTGATGGGCAGATTGTGACAGACTCAGATGAAGAAGTGGACACTGATGAAGAAGGGGTGGAAAAGACTCTTCTGAAAGCAGCAACAGGTGGCGCTGCGTCAGATGGTGGCAGTGTCACATTTACCTCCCCAGATGGATCCAGGCTTTTCTCTGTCGAGCGTCCTGCTGGTTTGGGATCCTCAATGCGGCCTATGAAACCTGGTACACGACCAAACCCTTCTACTCTATTTTCCAATGCTACAGTTGGGGGAGATACTGACAACAGCTTGAGTGAAGAAGAGAAAAAGAAACTGGAAAAATTTCAGCAGATAAGGGTTAAGTTCTTAAGGCTTGTTCAGAGATTAGGTGTATCTACAGAAGATTCAATAGCCAAGCAGGTTCTATACCGTCTAGCTCTTGTTTCAGGAAGGCAAAATAGTCGTGAGTTTAGCCTTGAAGCTGCAAAGACAACAGCTCTTGAGCTTGAAGCAGATGGGAAAGACGATCTTGACTTTTCCTTGAACATACTGGTTCTTGGGAAAACAGGTGTGGGGAAGAGTGCTACTATTAATTCTATTTTTGGTGAAGAAAAGACTCCAATTTATGCCTTTGGACCAGCAACAACCACTGTGAAAGAAATTGTTGGAGTGGTGGATGGAATCAAGATTAGGGTTTTTGATACACCAGAAGTTCACGAAAAAATGCCCCCAGATATTGTCCTCTATGTGGATCGGTTGGACACCCAAAGTAGGGATCTAAATGATGTGCCAGTATTAAGATCAATTACTAGTGCTTTTGGCCCTTCAATTTGGCGAAGTACTATAGTCACTCTAACCCATGCTGCTTCTGCTCCTCCTGACGGACCATCAGGCTCTCCTCTGAATTATGAGTTGTTTGTTGCTCAGAGGTCACAGATCCTCCAGCAGACCATTGGACAAGCTATTGGGGATATAAGGTTTACAAATCCAAATATGATGAGTCCTATATCTCTTGTAGAGAACCACCCCTCCTGTCGAAAGAATAGAGAAGGTCAGAAAGTGCTCCCTAATGGTCAAAGCTGGAGACCTCAGCTATTGCTCTTGAGCTCTTCTATGAAGGTCTTAGCTGAGGCAACTAATCTCTCAAAGCCTGCAGAACCATTTGATCACCGAAAGCTATTTGGTTTCCGCACCCGTTCAGCTCCTCTTCCATACTTGTTGTCTTGGCTGCTGCAGTCTCGTACCCATCCAAAGCTCTCTGGTGATCAAGGTGGTGAGAATGCTGACTCAGATATTGACTTGGCTGACTTGTCCGATTCTGATAATGAGGAAGAGGAGGATGAGTATGATCAGCTTCCATCATTCAAGCCTCTCAAGAAATCTCAGATTGCTAAGCTTACCAAAGAGCAGAAGAAGGCGTACCTTGAGGAGTACGATTACAGGGTTAAGCTCCTCCAGAAGAAGATGTGGAGAGAAGAGTTGAAAAGGATGAAAGAAATGAAGAAGGGTAATAAGGCTAATGCAGACGAGTATGGTTATCTGGGTGAAGAAGATCCGGAAAATGCTGGCCCAGCAGCTGTGCCAGTTGCATTACCTGATATGGTTTTGCCACCTTCTTTTGATAGTGAAAATCCAGCTTACAGGTACCGCTTCTTGGAGCCAACTTCTCAGTTCTTGGCCAGGCCAGTATTGGATGCCCAAGGTTGGGACCATGACTGTGGGTATGATGGTGTCAATCTTGAATACAGTCAAGCCATTGTTAATACTTTTCCAGCTACTGTTGCTGTTCAAGTTACAAAGGACAAGAAGGAGTTTAATCTCCATTTGGATTCTTCAGTTGCTGCTAAGCATGGGGAGAATGGATCAAGTATGGCAGGTTTTGACATTCAAAACATTGGAAAGCAACTTGCTTACATTGTCAGAGGAGAAACCAAATGGAAAAATTTGAAGAAGAACAAGACTACTGCTGGAGTATCCATGACATTTTTAGGTGAAAATGTATCCACTGGAGTCAAAATTGAGGATCAGATTGCCGTTGGCAAGCGCCTGGTATTTGTGGGTAGTGCTGGAACTGTCAGATCTCAGGGTGACTCGGCATATGGAGCCAATGTAGAGGTGCGGTTGAGGGAAGCAGATTTTCCAATTGGCCAGGATCAATCATCATTGGGTCTGTCTCTGGTGAAGTGGAGGGGTGACTTGGCCCTGGGGGCAAATCTTCAGTCCCAGTTTTCCCTTGGACGAGACTACAAGATAGCTGTTCGTGCAGGATTGAACAACAAGCGCAGCGGACAGATCTCGATTAGAACAAGCAGCTCTGAACAACTTCAAATTGCACTTGTGGCTGTCATTCCAATCGCTAAAGGTACCGACCCTCATAATTTCTCAACCAAATATGGATTCGCGGCCTTGCTTCGCCCGATTCGCGACCTCTCTTCTCCGGATTCGCGACCTCCCTTCGTTGGATTCGCGGCCTCGGTTCGCCGGTTGCTTTGCGGCCTCGGTTCGCCGACTCGCCGCCTCACTTCGCCGGCTTCGTCGGTTGCTTCGCGCCTTGCTTCTTGCTTCGCCGATTCTCCGGCCTCCCGCCGGATTCGCGGCCTCGGTTCGCGGGTTGCTTTGCAACCTCGGTTGTCGGATTCGCCGCCTCACTTCGCCGGCCGCGGCCTCGCTTCGCGGGTTGCTTCGCATCCCTTGCTTCGCCCGATTCACGCCTCGCTTCACCGCTCACTTGGCGGGTTGCTTCGTCACCTAGCTTTCACCGAGCTTCATCGCCTAGCTTCGCGGCCTCACTTGGCCGATCGCTTCTTCTCCTAG

Protein Analysis

1579

Amino Acids

170.44

Weight (kDa)

4.76

Isoelectric Point (pI)

47.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AIG1 PF04548 823 - 945 1.5e-12 AIG1 family
TOC159_MAD PF11886 1169 - 1429 6.7e-127 Translocase of chloroplast 159/132, membrane anchor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 2335, 3791
Acc65I GGTACC 2 cut(s) 3570, 4289
AccB1I GGYRCC 2 cut(s) 3570, 4289
AccBSI CCGCTC 2 cut(s) 23, 4650
AccIII TCCGGA 2 cut(s) 3481, 4363
AcoI YGGCCR 4 cut(s) 3603, 4072, 4582, 4719
AcsI RAATTY 3 cut(s) 347, 2267, 3868
AcuI CTGAAG 6 cut(s) 30, 1541, 1596, 1803, 3744, 4127
AflII CTTAAG 1 cut(s) 2293
AhlI ACTAGT 2 cut(s) 977, 2735
AjuI GAANNNNNNNTTGG 4 cut(s) 1738, 1770, 4307, 4339
AloI GAACNNNNNNTCC 2 cut(s) 2939, 2971
Alw21I GWGCWC 3 cut(s) 1853, 2991, 3035
Alw26I GTCTC 6 cut(s) 276, 397, 3004, 3168, 4104, 4161
AlwNI CAGNNNCTG 5 cut(s) 653, 1901, 3503, 3704, 3767
Ama87I CYCGRG 1 cut(s) 1646
Aor13HI TCCGGA 2 cut(s) 3481, 4363
ApaI GGGCCC 1 cut(s) 1554
ApoI RAATTY 3 cut(s) 347, 2267, 3868
ArsI GACNNNNNNTTYG 2 cut(s) 4130, 4162
AseI ATTAAT 1 cut(s) 2517
Asp700I GAANNNNTTC 3 cut(s) 511, 2268, 4248
Asp718I GGTACC 2 cut(s) 3570, 4289
AspLEI GCGC 4 cut(s) 2063, 3972, 4209, 4476
AsuC2I CCSGG 1 cut(s) 818
AsuII TTCGAA 1 cut(s) 445
AvaI CYCGRG 1 cut(s) 1646
AvaII GGWCC 4 cut(s) 814, 2561, 2810, 3634
AxyI CCTNAGG 2 cut(s) 374, 618
BaeGI GKGCMC 1 cut(s) 1554
BalI TGGCCA 2 cut(s) 3605, 4074
BamHI GGATCC 2 cut(s) 2105, 2144
BanI GGYRCC 2 cut(s) 3570, 4289
BanII GRGCYC 3 cut(s) 1554, 1853, 3035
BarI GAAGNNNNNNTAC 2 cut(s) 3329, 3361
BauI CACGAG 1 cut(s) 1357
Bbv12I GWGCWC 3 cut(s) 1853, 2991, 3035
BbvCI CCTCAGC 3 cut(s) 1476, 3015, 3054
BceAI ACGGC 5 cut(s) 427, 660, 843, 1374, 3944
BcgI CGANNNNNNTGC 4 cut(s) 2114, 2148, 2369, 2403
BciVI GTATCC 2 cut(s) 3910, 3937
BclI TGATCA 5 cut(s) 1123, 1378, 3091, 3190, 3274
BcnI CCSGG 1 cut(s) 818
BcoDI GTCTC 6 cut(s) 276, 397, 3004, 3168, 4104, 4161
BcuI ACTAGT 2 cut(s) 977, 2735
BfaI CTAG 8 cut(s) 299, 978, 1254, 2360, 2736, 4676, 4700, 4738
BfmI CTRYAG 6 cut(s) 1854, 2208, 2322, 2769, 3078, 3158
BfoI RGCGCY 2 cut(s) 2064, 3973
BfrI CTTAAG 1 cut(s) 2293
BfuAI ACCTGC 2 cut(s) 2335, 3791
BfuI GTATCC 2 cut(s) 3910, 3937
BglI GCCNNNNNGGC 1 cut(s) 4133
BglII AGATCT 2 cut(s) 4004, 4218
BlpI GCTNAGC 2 cut(s) 3318, 3771
BmcAI AGTACT 1 cut(s) 2767
Bme18I GGWCC 4 cut(s) 814, 2561, 2810, 3634
BmeT110I CYCGRG 1 cut(s) 1646
BmrI ACTGGG 2 cut(s) 1597, 4144
BmsI GCATC 3 cut(s) 1039, 3610, 4621
BmuI ACTGGG 2 cut(s) 1597, 4144
BplI GAGNNNNNCTC 2 cut(s) 1694, 1726
BpmI CTGGAG 5 cut(s) 2852, 3028, 3365, 3915, 3954
Bpu10I CCTNAGC 3 cut(s) 1476, 3015, 3054
Bpu1102I GCTNAGC 2 cut(s) 3318, 3771
Bpu14I TTCGAA 1 cut(s) 445
BpuEI CTTGAG 5 cut(s) 2257, 2447, 3049, 3284, 3371
BpuMI CCSGG 1 cut(s) 818
Bsa29I ATCGAT 1 cut(s) 147
BsaBI GATNNNNATC 1 cut(s) 252
BsaI GGTCTC 2 cut(s) 397, 3004
BsaWI WCCGGW 4 cut(s) 167, 304, 3481, 4363
Bse118I RCCGGY 4 cut(s) 451, 4407, 4453, 4580
Bse21I CCTNAGG 2 cut(s) 374, 618
Bse8I GATNNNNATC 1 cut(s) 252
BseAI TCCGGA 2 cut(s) 3481, 4363
BseCI ATCGAT 1 cut(s) 147
BseGI GGATG 8 cut(s) 406, 1177, 2608, 3172, 3271, 3420, 3625, 4612
BseJI GATNNNNATC 1 cut(s) 252
BseSI GKGCMC 1 cut(s) 1554
BseX3I CGGCCG 1 cut(s) 4582
BseYI CCCAGC 3 cut(s) 896, 1210, 3496
BsgI GTGCAG 4 cut(s) 23, 719, 1938, 4209
Bsh1285I CGRYCG 2 cut(s) 4585, 4726
BshNI GGYRCC 2 cut(s) 3570, 4289
BshVI ATCGAT 1 cut(s) 147
BsiEI CGRYCG 2 cut(s) 4585, 4726
BsiHKAI GWGCWC 3 cut(s) 1853, 2991, 3035
BsiHKCI CYCGRG 1 cut(s) 1646
BslFI GGGAC 3 cut(s) 800, 3647, 4132
BsmAI GTCTC 6 cut(s) 276, 397, 3004, 3168, 4104, 4161
BsmBI CGTCTC 1 cut(s) 276
BsmFI GGGAC 3 cut(s) 800, 3647, 4132
BsmI GAATGC 2 cut(s) 1645, 3211
Bso31I GGTCTC 2 cut(s) 397, 3004
BsoBI CYCGRG 1 cut(s) 1646
Bsp119I TTCGAA 1 cut(s) 445
Bsp120I GGGCCC 1 cut(s) 1550
Bsp1286I GDGCHC 4 cut(s) 1554, 1853, 2991, 3035
Bsp13I TCCGGA 2 cut(s) 3481, 4363
Bsp1720I GCTNAGC 2 cut(s) 3318, 3771
Bsp68I TCGCGA 2 cut(s) 4350, 4372
BspDI ATCGAT 1 cut(s) 147
BspEI TCCGGA 2 cut(s) 3481, 4363
BspMAI CTGCAG 3 cut(s) 1858, 3082, 3162
BspMI ACCTGC 2 cut(s) 2335, 3791
BspQI GCTCTTC 2 cut(s) 864, 3040
BspT104I TTCGAA 1 cut(s) 445
BspT107I GGYRCC 2 cut(s) 3570, 4289
BspTI CTTAAG 1 cut(s) 2293
BspTNI GGTCTC 2 cut(s) 397, 3004
BsrBI CCGCTC 2 cut(s) 23, 4650
BsrFI RCCGGY 4 cut(s) 451, 4407, 4453, 4580
BssAI RCCGGY 4 cut(s) 451, 4407, 4453, 4580
BssSI CACGAG 1 cut(s) 1357
BssT1I CCWWGG 3 cut(s) 387, 3625, 4159
Bst2BI CACGAG 1 cut(s) 1357
BstAFI CTTAAG 1 cut(s) 2293
BstAPI GCANNNNNTGC 3 cut(s) 730, 1202, 4618
BstBI TTCGAA 1 cut(s) 445
BstC8I GCNNGC 9 cut(s) 453, 726, 1009, 1278, 3078, 3493, 3968, 4455, 4582
BstDSI CCRYGG 2 cut(s) 396, 4585
BstEII GGTNACC 1 cut(s) 1931
BstF5I GGATG 8 cut(s) 406, 1177, 2608, 3172, 3271, 3420, 3625, 4612
BstH2I RGCGCY 2 cut(s) 2064, 3973
BstHHI GCGC 4 cut(s) 2063, 3972, 4209, 4476
BstMAI GTCTC 6 cut(s) 276, 397, 3004, 3168, 4104, 4161
BstMCI CGRYCG 2 cut(s) 4585, 4726
BstNSI RCATGY 1 cut(s) 737
BstPI GGTNACC 1 cut(s) 1931
BstSFI CTRYAG 6 cut(s) 1854, 2208, 2322, 2769, 3078, 3158
BstSLI GKGCMC 1 cut(s) 1554
BstX2I RGATCY 7 cut(s) 2105, 2144, 2701, 2862, 3478, 4004, 4218
BstXI CCANNNNNNTGG 1 cut(s) 3644
BstYI RGATCY 7 cut(s) 2105, 2144, 2701, 2862, 3478, 4004, 4218
BstZI CGGCCG 1 cut(s) 4582
Bsu15I ATCGAT 1 cut(s) 147
Bsu36I CCTNAGG 2 cut(s) 374, 618
BsuI GTATCC 2 cut(s) 3910, 3937
BsuTUI ATCGAT 1 cut(s) 147
BtgI CCRYGG 2 cut(s) 396, 4585
BtgZI GCGATG 2 cut(s) 786, 4679
BtsCI GGATG 8 cut(s) 406, 1177, 2608, 3172, 3271, 3420, 3625, 4612
BtsI GCAGTG 1 cut(s) 2086
BtsIMutI CAGTG 6 cut(s) 132, 241, 2010, 2086, 2574, 3930
BtuMI TCGCGA 2 cut(s) 4350, 4372
BveI ACCTGC 2 cut(s) 2335, 3791
Cac8I GCNNGC 9 cut(s) 453, 726, 1009, 1278, 3078, 3493, 3968, 4455, 4582
CaiI CAGNNNCTG 5 cut(s) 653, 1901, 3503, 3704, 3767
CfoI GCGC 4 cut(s) 2063, 3972, 4209, 4476
Cfr10I RCCGGY 4 cut(s) 451, 4407, 4453, 4580
Cfr42I CCGCGG 1 cut(s) 4588
ClaI ATCGAT 1 cut(s) 147
CseI GACGC 2 cut(s) 2055, 2117
CsiI ACCWGGT 1 cut(s) 2167
CspCI CAANNNNNGTGG 2 cut(s) 1149, 1184
CviAII CATG 8 cut(s) 734, 962, 1238, 1616, 2786, 3638, 3776, 3904
EaeI YGGCCR 4 cut(s) 3603, 4072, 4582, 4719
EagI CGGCCG 1 cut(s) 4582
Ecl136II GAGCTC 2 cut(s) 1851, 3033
EclXI CGGCCG 1 cut(s) 4582
Eco130I CCWWGG 3 cut(s) 387, 3625, 4159
Eco24I GRGCYC 3 cut(s) 1554, 1853, 3035
Eco31I GGTCTC 2 cut(s) 397, 3004
Eco32I GATATC 1 cut(s) 973
Eco47I GGWCC 4 cut(s) 814, 2561, 2810, 3634
Eco52I CGGCCG 1 cut(s) 4582
Eco53kI GAGCTC 2 cut(s) 1851, 3033
Eco57I CTGAAG 6 cut(s) 30, 1541, 1596, 1803, 3744, 4127
Eco81I CCTNAGG 2 cut(s) 374, 618
Eco88I CYCGRG 1 cut(s) 1646
Eco91I GGTNACC 1 cut(s) 1931
EcoICRI GAGCTC 2 cut(s) 1851, 3033
EcoO109I RGGNCCY 2 cut(s) 814, 1550
EcoO65I GGTNACC 1 cut(s) 1931
EcoRV GATATC 1 cut(s) 973
EcoT14I CCWWGG 3 cut(s) 387, 3625, 4159
EcoT38I GRGCYC 3 cut(s) 1554, 1853, 3035
ErhI CCWWGG 3 cut(s) 387, 3625, 4159
Esp3I CGTCTC 1 cut(s) 276
FaeI CATG 8 cut(s) 737, 965, 1241, 1619, 2789, 3641, 3779, 3907
FalI AAGNNNNNCTT 2 cut(s) 2439, 2471
FaqI GGGAC 3 cut(s) 800, 3647, 4132
FatI CATG 8 cut(s) 733, 961, 1237, 1615, 2785, 3637, 3775, 3903
FauI CCCGC 6 cut(s) 28, 1016, 4517, 4527, 4593, 4652
FauNDI CATATG 1 cut(s) 4024
FbaI TGATCA 5 cut(s) 1123, 1378, 3091, 3190, 3274
FokI GGATG 8 cut(s) 413, 1184, 2615, 3159, 3278, 3427, 3632, 4599
FriOI GRGCYC 3 cut(s) 1554, 1853, 3035
FspBI CTAG 8 cut(s) 299, 978, 1254, 2360, 2736, 4676, 4700, 4738
GlaI GCGC 4 cut(s) 2062, 3971, 4208, 4475
GsaI CCCAGC 3 cut(s) 900, 1214, 3500
GsuI CTGGAG 5 cut(s) 2852, 3028, 3365, 3915, 3954
HaeII RGCGCY 2 cut(s) 2064, 3973
HgaI GACGC 2 cut(s) 2055, 2117
HhaI GCGC 4 cut(s) 2063, 3972, 4209, 4476
Hin1II CATG 8 cut(s) 737, 965, 1241, 1619, 2789, 3641, 3779, 3907
Hin6I GCGC 4 cut(s) 2061, 3970, 4207, 4474
HinP1I GCGC 4 cut(s) 2061, 3970, 4207, 4474
HindIII AAGCTT 1 cut(s) 3320
Hpy166II GTNNAC 8 cut(s) 705, 1177, 1612, 1634, 2008, 2174, 2641, 2907
Hpy8I GTNNAC 8 cut(s) 705, 1177, 1612, 1634, 2008, 2174, 2641, 2907
Hpy99I CGWCG 2 cut(s) 158, 4465
Hsp92II CATG 8 cut(s) 737, 965, 1241, 1619, 2789, 3641, 3779, 3907
HspAI GCGC 4 cut(s) 2061, 3970, 4207, 4474
Kpn2I TCCGGA 2 cut(s) 3481, 4363
KpnI GGTACC 2 cut(s) 3574, 4293
KroI GCCGGC 3 cut(s) 451, 4453, 4580
KroNI GCCGGC 3 cut(s) 453, 4455, 4582
Ksp22I TGATCA 5 cut(s) 1123, 1378, 3091, 3190, 3274
KspI CCGCGG 1 cut(s) 4588
LguI GCTCTTC 2 cut(s) 864, 3040
LweI GCATC 3 cut(s) 1039, 3610, 4621
MabI ACCWGGT 1 cut(s) 2167
MaeI CTAG 8 cut(s) 299, 978, 1254, 2360, 2736, 4676, 4700, 4738
MbiI CCGCTC 2 cut(s) 23, 4650
MfeI CAATTG 1 cut(s) 4068
MflI RGATCY 7 cut(s) 2105, 2144, 2701, 2862, 3478, 4004, 4218
MhlI GDGCHC 4 cut(s) 1554, 1853, 2991, 3035
MlsI TGGCCA 2 cut(s) 3605, 4074
MluNI TGGCCA 2 cut(s) 3605, 4074
MmeI TCCRAC 9 cut(s) 123, 387, 789, 1065, 1863, 2572, 2664, 4366, 4539
Mox20I TGGCCA 2 cut(s) 3605, 4074
MroI TCCGGA 2 cut(s) 3481, 4363
MroNI GCCGGC 3 cut(s) 451, 4453, 4580
MroXI GAANNNNTTC 3 cut(s) 511, 2268, 4248
MscI TGGCCA 2 cut(s) 3605, 4074
MslI CAYNNNNRTG 1 cut(s) 3642
Msp20I TGGCCA 2 cut(s) 3605, 4074
MspA1I CMGCKG 7 cut(s) 761, 1037, 1199, 1859, 3503, 4212, 4587
MspCI CTTAAG 1 cut(s) 2293
MunI CAATTG 1 cut(s) 4068
Mva1269I GAATGC 2 cut(s) 1645, 3211
NaeI GCCGGC 3 cut(s) 453, 4455, 4582
NciI CCSGG 1 cut(s) 818
NdeI CATATG 1 cut(s) 4024
NgoMIV GCCGGC 3 cut(s) 451, 4453, 4580
NlaIII CATG 8 cut(s) 737, 965, 1241, 1619, 2789, 3641, 3779, 3907
NmeAIII GCCGAG 1 cut(s) 3998
NruI TCGCGA 2 cut(s) 4350, 4372
NspI RCATGY 1 cut(s) 737
NspV TTCGAA 1 cut(s) 445
PaeR7I CTCGAG 1 cut(s) 1646
PasI CCCWGGG 1 cut(s) 4129
PciSI GCTCTTC 2 cut(s) 864, 3040
PcsI WCGNNNNNNNCGW 3 cut(s) 153, 1812, 4457
PctI GAATGC 2 cut(s) 1645, 3211
PdiI GCCGGC 3 cut(s) 453, 4455, 4582
PdmI GAANNNNTTC 3 cut(s) 511, 2268, 4248
PfoI TCCNGGA 1 cut(s) 1491
Ple19I CGATCG 1 cut(s) 4726
PpuMI RGGWCCY 1 cut(s) 814
PshBI ATTAAT 1 cut(s) 2517
Psp124BI GAGCTC 2 cut(s) 1853, 3035
Psp5II RGGWCCY 1 cut(s) 814
PspEI GGTNACC 1 cut(s) 1931
PspFI CCCAGC 3 cut(s) 896, 1210, 3496
PspOMI GGGCCC 1 cut(s) 1550
PspPPI RGGWCCY 1 cut(s) 814
PstI CTGCAG 3 cut(s) 1858, 3082, 3162
PstNI CAGNNNCTG 5 cut(s) 653, 1901, 3503, 3704, 3767
PsuI RGATCY 7 cut(s) 2105, 2144, 2701, 2862, 3478, 4004, 4218
PvuI CGATCG 1 cut(s) 4726
PvuII CAGCTG 5 cut(s) 761, 1037, 1199, 1859, 3503
RruI TCGCGA 2 cut(s) 4350, 4372
RseI CAYNNNNRTG 1 cut(s) 3642
SacI GAGCTC 2 cut(s) 1853, 3035
SacII CCGCGG 1 cut(s) 4588
SapI GCTCTTC 2 cut(s) 864, 3040
ScaI AGTACT 1 cut(s) 2767
SduI GDGCHC 4 cut(s) 1554, 1853, 2991, 3035
SexAI ACCWGGT 1 cut(s) 2167
SfaNI GCATC 3 cut(s) 1039, 3610, 4621
SfcI CTRYAG 6 cut(s) 1854, 2208, 2322, 2769, 3078, 3158
Sfr274I CTCGAG 1 cut(s) 1646
Sfr303I CCGCGG 1 cut(s) 4588
SfuI TTCGAA 1 cut(s) 445
SgrBI CCGCGG 1 cut(s) 4588
SinI GGWCC 4 cut(s) 814, 2561, 2810, 3634
SlaI CTCGAG 1 cut(s) 1646
SmiMI CAYNNNNRTG 1 cut(s) 3642
SmlI CTYRAG 7 cut(s) 1646, 2236, 2293, 2426, 3028, 3299, 3350
SmoI CTYRAG 7 cut(s) 1646, 2236, 2293, 2426, 3028, 3299, 3350
SpeI ACTAGT 2 cut(s) 977, 2735
SspMI CTAG 8 cut(s) 299, 978, 1254, 2360, 2736, 4676, 4700, 4738
SstI GAGCTC 2 cut(s) 1853, 3035
StyI CCWWGG 3 cut(s) 387, 3625, 4159
TaqI TCGA 8 cut(s) 147, 252, 445, 551, 1647, 2124, 2962, 4223
TatI WGTACW 2 cut(s) 1633, 2765
TscAI CASTG 6 cut(s) 139, 241, 2017, 2086, 2581, 3937
TspGWI ACGGA 3 cut(s) 385, 930, 2823
TspRI CASTG 6 cut(s) 139, 241, 2017, 2086, 2581, 3937
Vha464I CTTAAG 1 cut(s) 2293
VpaK11BI GGWCC 4 cut(s) 814, 2561, 2810, 3634
VspI ATTAAT 1 cut(s) 2517
XapI RAATTY 3 cut(s) 347, 2267, 3868
XceI RCATGY 1 cut(s) 737
XcmI CCANNNNNNNNNTGG 6 cut(s) 394, 635, 1870, 2876, 3613, 4157
XhoI CTCGAG 1 cut(s) 1646
XmnI GAANNNNTTC 3 cut(s) 511, 2268, 4248
XspI CTAG 8 cut(s) 299, 978, 1254, 2360, 2736, 4676, 4700, 4738
ZrmI AGTACT 1 cut(s) 2767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.