Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0004317

Physical Location & Seq

Genomic Coordinates Reverse (-)

54965211 .. 54970402

Gene Structure 5192 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG350100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4278 bp

ATGGACTCCTCCAAGCTCCCCGCTCCACAACTCCCTCTGCACTCATCAGGTCTGGGTAGTGACGGTGAGGAGGGGTTCGTCAGTGGGGAGGAGGATTTCGATCCTGGTTTGGATAGGGCGTTTGTCAGAGACGAACAACAAACCCTAGCTCCGGTGGAAGGGGAGGTAGTGGAGAGTAGCAGCAACGCTGTCAAATTTGTTAGTTCTTCCGAGTTTTTTCTGAGGCCGGTTGCCAAGGTCTCCGTGGATGATGATGACGGCGAAGAAGAAGAAGAAGAGGATTGGAAAGCCGGTGTGCAAGTGTTTAAGGAGTCTGTGGGGGTGGGTGAGAGTTCTGAGGTGGAGAAGGGTTTCAATTCCGGTGAGTTGGTGAAAGAGAATGGTGTTGGTGGTGAAGTAGAGAAGTCGAAAGTTGCGGAGGGTTTAGGCTCTGTTTCTATGGCTGAGATAGAGGATAAGAAGGTTGTAGAGCCGAAGGAGAGCGAGGTTGTTAATGGTGCCGCAGAAGCTGTGAGGGAGAGTAGTGAGAATGGCTTGGTTGAAGAACACGGTGTGCAAGCTGTGCATGTTGATTTGTCACACACAGGAGCAGCTGTTGTTGGCGATGTGGAGAAGATTGAGGAGTCTGAGATAAAAGGGTTGGAGGTTCCCGTAGGGGTGAGCTTGGATAATGAGTTTGCTCAAATTAGCCGTGAGGTTGAAGAGCCGAAAGATTCAGAGTTGGTTGCTGTGGAGTCTAAGTCTGACGGAGTGGTTGTTGCTGAACCAGCAGTTGATAAGTTGGTTGAAGAACATGGTGTTGATATCATTAGTGAAGGTCACACAGTTGTGGAAGCTGTCCGTGTTGATTTGTCACAGACAGGAGCAGCTGTTGTTGGTGATGTGGAGAAGATTGAGGAATCTGCAATTAAAGGGTTGGAGGTTCCAGCAGGAGTAAGCTTGGAGAATGGATTTGATCAAATTGGCCGTGATTCTGAATTGCCAAATGATTCAAAGTTGGTGGATGTGAACTCTGAGTCTGAAAAAGCTGCTGTTGCTGACCCAGCAGGTGATAAGTTGGTTGAAGAACATGGTATGGATTTTACTAGCAAGGGCGATTCAGTTGTGCAAGCTGTTGATGTTGATTTGTCACAGACAGGAGCAGATGTTGTTGGTGATGTGGAGAAGATTGAGGAATCTGAAATTAAAGTTCCAATAGGCACGAGCTTGGAGAATGGATCTGATCAAGTTAGCCGTGATGTTGAATTGCAGTCCGAGTCTGACAAAGTGGTTGTTGCTGAGTCGGGGAATGTGGAGCAGAAAGCTGTTGCTGCTGCTGCTGAGGAAGTAGATTTTCAGGAGAGAGAGGAGAAAGAACTTGAACTGAAGTCCAATGCTGCAACTGGACAGGAAGGGCCCACAATGGAGATAGGTGCTGCTGAAGTAAAAGTAGTGCCAGATGAAACCCAGTCTGTGAACCATGGTTCTGATTTTAGTGTACTGAATGCACCCGAGAGTGCTGAAAAGAATGCAACTGACCAAGAAATAAAATTAGAGGAGGAAGAGGAGAAGCACTCTCTTGATGAAAGTGGCATTGAATCTTTAGAACCAAGTTCCATTTCACATCAAGAGATAAGGGTTGAAGCTGAAGATGATGACGAAGATGATGACGATAAGGACGATGAAGGGGAAAATGATGGTATGATATTTGGGAGCTCTGCAGCTGCCAAACAATTCTTGGAAGAGTTGGAACGGGAATCAGGTACTGGTTCTTACTCAGGTGCAGAGAGTTACGGTGACCGTTCTCTGAGTTATCGTGATGATTCTCAGAGAGTTGATGGGCAGATTGTGACAGACTCAGATGAAGAAGTGGACACTGATGAAGAAGGGGGTGGAAAAGAGTTATTTGATTCTGCTGCATTGGCAGCTCTTCTGAAAGCAGCAACAGGTGGCGCTGCGTCAGATGGTGGCAGTGTCACATTTACCTCCCCAGATGGATCCAGGCTTTTCTCTGTCGAGCGTCCTGCTGGTTTGGGATCCTCAATGCGGCCTATGAAACCTGGTACACGACCAAACCCTTCTACTCTATTTTCCAATGCTACAGTTGGGGGAGATACTGACAACAGCTTGAGTGAAGAAGAGAAAAAGAAACTGGAAAAATTTCAGCAGATAAGGGTTAAGTTCTTAAGGCTTGTTCAGAGATTAGGTGTATCTACAGAAGATTCAATAGCCAAGCAGGTTCTATACCGCCTAGCTCTTGTTTCAGGAAGGCAAAATAGTCGTGAGTTTAGCCTTGAAGCTGCAAAGACAACAGCTCTTGAGCTTGAAGCAGATCAGAAAGACGATCTTGACTTTTCCTTGAACGTACTGGTTCTTGGGAAAACAGGTGTGGGGAAGAGTGCTACTATTAATTCTATTTTTGGTGAAGAAAAGACTCCAATTTATGCCTTTGGACCAGCAACAACCACTGTGAAAGAAATTGTTGGAGTGGTGGATGGAATCAAGATTAGGGTTTTTGATACACCAGGTCTTAAATCTGCTGCAATGGAACAAAATGTAAACCGCAAAATTTTATCTTCTGTGCAGAAGTTCACGAAAAAATGCCCCCCAGATATTGTCCTCTATGTGGATCGGTTGGACACCCAAAGTAGGGATCTAAATGATGTGCCAGTATTAAGATCAATTACTAGTGCTTTTGGCTCTTCAATTTGGCGAAGTACAATAGTCACTCTAACCCATGCTGCTTCTGCTCCTCCTGATGGACCATCGGGCTCTCCTCTGAATTATGAGTTGTTTGTTGCTCAGAGGTCACAGATCCTCCAGCAGACCATTGGACAAGCTATTGGGGATATAAGGTTTACAAATCCAAATATGATGAGTCCTATATCTCTTGTAGAGAACCATCCCTCCTGTCGAAAGAATAGAGAAGGTCAGAAAGTGCTCCCTAATGGTCAAAGCTGGAGACCTCAGCTATTGCTCTTGAGCTCTTCTATGAAGGTCTTAGCTGAGGCAACTAATCTCTCAAAGCCTGCAGAACCATTTGATCACCGAAAACTATTTGGTTTCCGCACCCGTTCAGCTCCTCTTCCATACTTGTTGTCTTGGCTTCTGCAGTCTCGTACCCATCCAAAGCTCTCTGGTGATCAAGGTGGTGAGAATGCTGACTCAGATATTGACTTGGCTGACTTGTCCGATTCTGATAATGAGGAAGAGGAGGATGAGTATGATCAGCTTCCATCATTCAAGCCTCTCAAGAAATCTCAGATTGCTAAGCTTAGCAAAGAGCAGAAGAAGGCGTACCTTGAGGAGTACGATTACAGGGTTAAGCTCCTCCAGAAGAAGATGTGGAGAGAAGAGTTGAAAAGGATGAAAGAAATGAAGAAGGGTAATAAGGCTAGTGCAGACGAGTATGGTTATCTGGGTGAAGAAGATCCGGAAAATGCTGGCCCAGCAGCTGTGCCAGTTGCATTACCTGATATGGTTCTGCCACCTTCTTTTGATAGTGAAAATCCAGCTTACAGGTACCGCTTCTTGGAGCCAACTTCTCAGTTCTTGGCTAGGCCAGTATTGGATGCCCAAGGTTGGGACCATGACTGTGGATATGATGGTGTCAATCTTGAATACAGTCAAGCCATTGTTAATACTTTTCCAGCTACTGTTGCTGTTCAAGTTACAAAGGACAAGAAGGAGTTTAATCTCCATTTGGATTCTTCAGTTGCTGCTAAGCATGGGGAGAATGGATCAAGTATGGCAGGTTTTGACATTCAAAACATTGGAAAGCAACTTGCTTACATTGTCAGAGGAGAAACCAAATGGAAAAATTTGAAGAAGAACAAGACTACTGCTGGAGTATCCATGACATTTTTAGGTGAAAATGTATCCACTGGAGTCAAAATTGAGGATCAGATTGCCGTTGGCAAGCGCCTGGTATTTGTGGGTAGTGCTGGAACCGTTAGATCTCAGGGTGACTCGGCATATGGAGCCAATGTAGAGGTGCGGTTGAGGGAAGCAGATTTTCCAATTGGCCAGGATCAATCATCATTGGGTCTCTCTCTGGTGAAGTGGAGGGGTGACTTGGCCCTGGGGGCAAATCTTCAGTCCCAGTTTTCCCTTGGACGAGACTACAAGATAGCTGTTCGTGCAGGATTGAACAACAAGCGCAGCGGACAGATCTCGATTAGAACAAGCAGCTCTGAACAACTTCAAATTGCACTTGTGGCTGTCATTCCAATCGTAAGATCCATCTATAATCTTATCTTCCCTGGAGCTTCACTCAGTGAGAATTACTCAATCTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003924 GO:0004888 GO:0004930 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006605 GO:0006810 GO:0006886 GO:0007154 GO:0007165 GO:0007186 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009707 GO:0009941 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017038 GO:0017111 GO:0019867 GO:0023052 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0038023 GO:0042170 GO:0042886 GO:0043021 GO:0043024 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0050896 GO:0051087 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055085 GO:0060089 GO:0061927 GO:0065002 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AIG1 TOC159_MAD

Protein Analysis

1425

Amino Acids

154.08

Weight (kDa)

4.54

Isoelectric Point (pI)

42.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AIG1	PF04548	780 - 927	2e-21	AIG1 family
MMR_HSR1	PF01926	782 - 870	2.3e-09	50S ribosome-binding GTPase
TOC159_MAD	PF11886	1146 - 1410	3.7e-128	Translocase of chloroplast 159/132, membrane anchor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0004317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02482 AT4G02510 AT4G02510 AT4G02510 AT4G02510
fragaria_vesca	FvH4_2g25480
malus_domestica	MD03G1285700.v1.1 MD11G1305100.v1.1
prunus_persica	Prupe.8G258800_v2.0.a1 Prupe.8G258800_v2.0.a1
pyrus_communis	pycom03g22640 pycom11g26690
rosa_chinensis	RchiOBHm_Chr6g0293691
rosa_laevigata	RLG00000011932
rosa_multiflora	Rmu_co8307375.1_g000001 Rmu_co8497971.1_g000001 Rmu_sc0005431.1_g000009
rosa_roxburghii	Rroxscaffold_7G00173980
rosa_rugosa	Rorug06G0237500 Rorug06G0237500
rosa_samantha	Rh4AG062400 Rh4AG063400 Rh4AG067300 Rh4BG061800 Rh4CG068100 Rh4DG056700 Rh6AG350100 Rh6BG357600 Rh6CG364400 Rh6DG351300
rosa_wichuraiana	Rw0G022990 Rw6G030480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1037
Acc36I	ACCTGC	3 cut(s)	1037, 2206, 3722
Acc65I	GGTACC	1 cut(s)	3501
AccB1I	GGYRCC	2 cut(s)	497, 3501
AccBSI	CCGCTC	1 cut(s)	23
AccIII	TCCGGA	1 cut(s)	3412
AcoI	YGGCCR	2 cut(s)	964, 4003
AcsI	RAATTY	4 cut(s)	194, 2138, 2547, 3799
AcuI	CTGAAG	5 cut(s)	1385, 1440, 1647, 3675, 4058
AdeI	CACNNNGTG	2 cut(s)	553, 4256
AfaI	GTAC	9 cut(s)	1479, 1744, 2044, 2346, 2698, 3100, 3278, 3290, 3503
AflII	CTTAAG	1 cut(s)	2164
AhlI	ACTAGT	1 cut(s)	2666
AjnI	CCWGG	8 cut(s)	103, 1979, 2038, 2503, 3903, 4005, 4059, 4240
AjuI	GAANNNNNNNTTGG	2 cut(s)	1582, 1614
AleI	CACNNNNGTG	1 cut(s)	827
AloI	GAACNNNNNNTCC	2 cut(s)	2870, 2902
Alw21I	GWGCWC	3 cut(s)	1697, 2922, 2966
Alw26I	GTCTC	6 cut(s)	123, 244, 2935, 3099, 4031, 4092
AlwNI	CAGNNNCTG	5 cut(s)	509, 1745, 3434, 3635, 3698
Ama87I	CYCGRG	1 cut(s)	1490
Aor13HI	TCCGGA	1 cut(s)	3412
AoxI	GGCC	8 cut(s)	224, 964, 1394, 2027, 3424, 3539, 4003, 4056
ApaI	GGGCCC	1 cut(s)	1398
ApoI	RAATTY	4 cut(s)	194, 2138, 2547, 3799
ArsI	GACNNNNNNTTYG	2 cut(s)	4061, 4093
AseI	ATTAAT	1 cut(s)	2388
Asp700I	GAANNNNTTC	3 cut(s)	350, 2139, 4179
Asp718I	GGTACC	1 cut(s)	3501
AspLEI	GCGC	3 cut(s)	1934, 3903, 4140
AspS9I	GGNCC	7 cut(s)	1394, 1395, 2432, 2741, 3425, 3565, 4057
AvaI	CYCGRG	1 cut(s)	1490
AvaII	GGWCC	3 cut(s)	2432, 2741, 3565
BaeGI	GKGCMC	1 cut(s)	1398
BalI	TGGCCA	1 cut(s)	4005
BamHI	GGATCC	2 cut(s)	1976, 2015
BanI	GGYRCC	2 cut(s)	497, 3501
BanII	GRGCYC	4 cut(s)	1398, 1697, 2753, 2966
BarI	GAAGNNNNNNTAC	2 cut(s)	3260, 3292
BauI	CACGAG	1 cut(s)	1201
Bbv12I	GWGCWC	3 cut(s)	1697, 2922, 2966
BbvCI	CCTCAGC	3 cut(s)	1320, 2946, 2985
BceAI	ACGGC	5 cut(s)	274, 675, 951, 1218, 3875
BcgI	CGANNNNNNTGC	4 cut(s)	1985, 2019, 2240, 2274
BciT130I	CCWGG	8 cut(s)	105, 1981, 2040, 2505, 3905, 4007, 4061, 4242
BciVI	GTATCC	2 cut(s)	3841, 3868
BclI	TGATCA	5 cut(s)	955, 1222, 3022, 3121, 3205
BcoDI	GTCTC	6 cut(s)	123, 244, 2935, 3099, 4031, 4092
BcuI	ACTAGT	1 cut(s)	2666
BfaI	CTAG	7 cut(s)	146, 1086, 2231, 2667, 3375, 3537, 4276
BfmI	CTRYAG	5 cut(s)	1698, 2079, 2193, 3009, 3089
BfoI	RGCGCY	2 cut(s)	1935, 3904
BfrI	CTTAAG	1 cut(s)	2164
BfuAI	ACCTGC	3 cut(s)	1037, 2206, 3722
BfuI	GTATCC	2 cut(s)	3841, 3868
BglI	GCCNNNNNGGC	1 cut(s)	4064
BglII	AGATCT	2 cut(s)	3935, 4149
BlpI	GCTNAGC	3 cut(s)	3249, 3254, 3702
Bme1390I	CCNGG	8 cut(s)	105, 1981, 2040, 2505, 3905, 4007, 4061, 4242
Bme18I	GGWCC	3 cut(s)	2432, 2741, 3565
BmeT110I	CYCGRG	1 cut(s)	1490
BmgT120I	GGNCC	7 cut(s)	1394, 1395, 2432, 2741, 3425, 3565, 4057
BmrFI	CCNGG	8 cut(s)	105, 1981, 2040, 2505, 3905, 4007, 4061, 4242
BmrI	ACTGGG	2 cut(s)	1441, 4075
BmsI	GCATC	1 cut(s)	3541
BmuI	ACTGGG	2 cut(s)	1441, 4075
BplI	GAGNNNNNCTC	5 cut(s)	1538, 1570, 4236, 4268, 4250
BpmI	CTGGAG	6 cut(s)	2783, 2959, 3296, 3846, 3885, 4263
Bpu10I	CCTNAGC	3 cut(s)	1320, 2946, 2985
Bpu1102I	GCTNAGC	3 cut(s)	3249, 3254, 3702
BpuEI	CTTGAG	5 cut(s)	2128, 2318, 2980, 3215, 3302
BsaBI	GATNNNNATC	1 cut(s)	99
BsaI	GGTCTC	3 cut(s)	244, 2935, 4031
BsaJI	CCNNGG	8 cut(s)	234, 243, 1459, 3556, 4059, 4060, 4090, 4240
BsaWI	WCCGGW	3 cut(s)	151, 359, 3412
Bse118I	RCCGGY	2 cut(s)	226, 290
Bse3DI	GCAATG	1 cut(s)	2529
Bse8I	GATNNNNATC	1 cut(s)	99
BseAI	TCCGGA	1 cut(s)	3412
BseBI	CCWGG	8 cut(s)	105, 1981, 2040, 2505, 3905, 4007, 4061, 4242
BseDI	CCNNGG	8 cut(s)	234, 243, 1459, 3556, 4059, 4060, 4090, 4240
BseGI	GGATG	8 cut(s)	253, 1009, 2479, 2881, 3103, 3202, 3351, 3556
BseJI	GATNNNNATC	1 cut(s)	99
BseMI	GCAATG	1 cut(s)	2529
BseSI	GKGCMC	1 cut(s)	1398
BseYI	CCCAGC	2 cut(s)	1042, 3427
BsgI	GTGCAG	5 cut(s)	23, 1782, 2582, 3399, 4140
BshFI	GGCC	8 cut(s)	226, 966, 1396, 2029, 3426, 3541, 4005, 4058
BshNI	GGYRCC	2 cut(s)	497, 3501
BsiHKAI	GWGCWC	3 cut(s)	1697, 2922, 2966
BsiHKCI	CYCGRG	1 cut(s)	1490
BsiSI	CCGG	5 cut(s)	152, 227, 291, 360, 3413
BslFI	GGGAC	2 cut(s)	3578, 4063
BsmAI	GTCTC	6 cut(s)	123, 244, 2935, 3099, 4031, 4092
BsmBI	CGTCTC	1 cut(s)	123
BsmFI	GGGAC	2 cut(s)	3578, 4063
BsmI	GAATGC	3 cut(s)	1489, 1513, 3142
BsnI	GGCC	8 cut(s)	226, 966, 1396, 2029, 3426, 3541, 4005, 4058
Bso31I	GGTCTC	3 cut(s)	244, 2935, 4031
BsoBI	CYCGRG	1 cut(s)	1490
Bsp120I	GGGCCC	1 cut(s)	1394
Bsp1286I	GDGCHC	5 cut(s)	1398, 1697, 2753, 2922, 2966
Bsp13I	TCCGGA	1 cut(s)	3412
Bsp1720I	GCTNAGC	3 cut(s)	3249, 3254, 3702
Bsp19I	CCATGG	1 cut(s)	1459
BspANI	GGCC	8 cut(s)	226, 966, 1396, 2029, 3426, 3541, 4005, 4058
BspEI	TCCGGA	1 cut(s)	3412
BspMAI	CTGCAG	3 cut(s)	1702, 3013, 3093
BspMI	ACCTGC	3 cut(s)	1037, 2206, 3722
BspQI	GCTCTTC	4 cut(s)	696, 1914, 2686, 2971
BspT107I	GGYRCC	2 cut(s)	497, 3501
BspTI	CTTAAG	1 cut(s)	2164
BspTNI	GGTCTC	3 cut(s)	244, 2935, 4031
BsrBI	CCGCTC	1 cut(s)	23
BsrDI	GCAATG	1 cut(s)	2529
BsrFI	RCCGGY	2 cut(s)	226, 290
BssAI	RCCGGY	2 cut(s)	226, 290
BssECI	CCNNGG	8 cut(s)	234, 243, 1459, 3556, 4059, 4060, 4090, 4240
BssSI	CACGAG	1 cut(s)	1201
BssT1I	CCWWGG	4 cut(s)	234, 1459, 3556, 4090
Bst2BI	CACGAG	1 cut(s)	1201
Bst2UI	CCWGG	8 cut(s)	105, 1981, 2040, 2505, 3905, 4007, 4061, 4242
BstAFI	CTTAAG	1 cut(s)	2164
BstAPI	GCANNNNNTGC	1 cut(s)	562
BstC8I	GCNNGC	5 cut(s)	558, 1110, 3009, 3424, 3899
BstDSI	CCRYGG	2 cut(s)	243, 1459
BstEII	GGTNACC	1 cut(s)	1775
BstF5I	GGATG	8 cut(s)	253, 1009, 2479, 2881, 3103, 3202, 3351, 3556
BstH2I	RGCGCY	2 cut(s)	1935, 3904
BstHHI	GCGC	3 cut(s)	1934, 3903, 4140
BstMAI	GTCTC	6 cut(s)	123, 244, 2935, 3099, 4031, 4092
BstNI	CCWGG	8 cut(s)	105, 1981, 2040, 2505, 3905, 4007, 4061, 4242
BstNSI	RCATGY	1 cut(s)	569
BstPI	GGTNACC	1 cut(s)	1775
BstSCI	CCNGG	8 cut(s)	103, 1979, 2038, 2503, 3903, 4005, 4059, 4240
BstSFI	CTRYAG	5 cut(s)	1698, 2079, 2193, 3009, 3089
BstSLI	GKGCMC	1 cut(s)	1398
BstX2I	RGATCY	9 cut(s)	1217, 1976, 2015, 2632, 2793, 3409, 3935, 4149, 4217
BstXI	CCANNNNNNTGG	1 cut(s)	3575
BstYI	RGATCY	9 cut(s)	1217, 1976, 2015, 2632, 2793, 3409, 3935, 4149, 4217
BsuI	GTATCC	2 cut(s)	3841, 3868
BsuRI	GGCC	8 cut(s)	226, 966, 1396, 2029, 3426, 3541, 4005, 4058
BtgI	CCRYGG	2 cut(s)	243, 1459
BtgZI	GCGATG	1 cut(s)	618
BtsCI	GGATG	8 cut(s)	253, 1009, 2479, 2881, 3103, 3202, 3351, 3556
BtsI	GCAGTG	1 cut(s)	1957
BtsIMutI	CAGTG	6 cut(s)	88, 1854, 1957, 2445, 3861, 4261
BveI	ACCTGC	3 cut(s)	1037, 2206, 3722
Cac8I	GCNNGC	5 cut(s)	558, 1110, 3009, 3424, 3899
CaiI	CAGNNNCTG	5 cut(s)	509, 1745, 3434, 3635, 3698
CfoI	GCGC	3 cut(s)	1934, 3903, 4140
Cfr10I	RCCGGY	2 cut(s)	226, 290
Cfr13I	GGNCC	7 cut(s)	1394, 1395, 2432, 2741, 3425, 3565, 4057
CseI	GACGC	2 cut(s)	1926, 1988
CsiI	ACCWGGT	2 cut(s)	2038, 2503
Csp6I	GTAC	9 cut(s)	1478, 1743, 2043, 2345, 2697, 3099, 3277, 3289, 3502
CspCI	CAANNNNNGTGG	2 cut(s)	981, 1016
CviAII	CATG	8 cut(s)	566, 794, 1070, 1460, 2717, 3569, 3707, 3835
CviQI	GTAC	9 cut(s)	1478, 1743, 2043, 2345, 2697, 3099, 3277, 3289, 3502
DraIII	CACNNNGTG	2 cut(s)	553, 4256
EaeI	YGGCCR	2 cut(s)	964, 4003
Ecl136II	GAGCTC	2 cut(s)	1695, 2964
Eco130I	CCWWGG	4 cut(s)	234, 1459, 3556, 4090
Eco24I	GRGCYC	4 cut(s)	1398, 1697, 2753, 2966
Eco31I	GGTCTC	3 cut(s)	244, 2935, 4031
Eco32I	GATATC	1 cut(s)	805
Eco47I	GGWCC	3 cut(s)	2432, 2741, 3565
Eco53kI	GAGCTC	2 cut(s)	1695, 2964
Eco57I	CTGAAG	5 cut(s)	1385, 1440, 1647, 3675, 4058
Eco88I	CYCGRG	1 cut(s)	1490
Eco91I	GGTNACC	1 cut(s)	1775
EcoICRI	GAGCTC	2 cut(s)	1695, 2964
EcoO109I	RGGNCCY	1 cut(s)	1394
EcoO65I	GGTNACC	1 cut(s)	1775
EcoRII	CCWGG	8 cut(s)	103, 1979, 2038, 2503, 3903, 4005, 4059, 4240
EcoRV	GATATC	1 cut(s)	805
EcoT14I	CCWWGG	4 cut(s)	234, 1459, 3556, 4090
EcoT38I	GRGCYC	4 cut(s)	1398, 1697, 2753, 2966
ErhI	CCWWGG	4 cut(s)	234, 1459, 3556, 4090
Esp3I	CGTCTC	1 cut(s)	123
FaeI	CATG	8 cut(s)	569, 797, 1073, 1463, 2720, 3572, 3710, 3838
FalI	AAGNNNNNCTT	2 cut(s)	2310, 2342
FaqI	GGGAC	2 cut(s)	3578, 4063
FatI	CATG	8 cut(s)	565, 793, 1069, 1459, 2716, 3568, 3706, 3834
FauI	CCCGC	1 cut(s)	28
FauNDI	CATATG	1 cut(s)	3955
FbaI	TGATCA	5 cut(s)	955, 1222, 3022, 3121, 3205
FokI	GGATG	8 cut(s)	260, 1016, 2486, 2868, 3090, 3209, 3358, 3563
FriOI	GRGCYC	4 cut(s)	1398, 1697, 2753, 2966
FspBI	CTAG	7 cut(s)	146, 1086, 2231, 2667, 3375, 3537, 4276
GlaI	GCGC	3 cut(s)	1933, 3902, 4139
GsaI	CCCAGC	2 cut(s)	1046, 3431
GsuI	CTGGAG	6 cut(s)	2783, 2959, 3296, 3846, 3885, 4263
HaeII	RGCGCY	2 cut(s)	1935, 3904
HaeIII	GGCC	8 cut(s)	226, 966, 1396, 2029, 3426, 3541, 4005, 4058
HapII	CCGG	5 cut(s)	152, 227, 291, 360, 3413
HgaI	GACGC	2 cut(s)	1926, 1988
HhaI	GCGC	3 cut(s)	1934, 3903, 4140
Hin1II	CATG	8 cut(s)	569, 797, 1073, 1463, 2720, 3572, 3710, 3838
Hin6I	GCGC	3 cut(s)	1932, 3901, 4138
HinP1I	GCGC	3 cut(s)	1932, 3901, 4138
HindIII	AAGCTT	2 cut(s)	937, 3251
HpaII	CCGG	5 cut(s)	152, 227, 291, 360, 3413
Hpy166II	GTNNAC	8 cut(s)	1009, 1456, 1478, 1852, 2045, 2539, 2571, 2838
Hpy8I	GTNNAC	8 cut(s)	1009, 1456, 1478, 1852, 2045, 2539, 2571, 2838
HpyCH4IV	ACGT	1 cut(s)	2343
HpySE526I	ACGT	1 cut(s)	2343
Hsp92II	CATG	8 cut(s)	569, 797, 1073, 1463, 2720, 3572, 3710, 3838
HspAI	GCGC	3 cut(s)	1932, 3901, 4138
Kpn2I	TCCGGA	1 cut(s)	3412
KpnI	GGTACC	1 cut(s)	3505
Ksp22I	TGATCA	5 cut(s)	955, 1222, 3022, 3121, 3205
LguI	GCTCTTC	4 cut(s)	696, 1914, 2686, 2971
LweI	GCATC	1 cut(s)	3541
MabI	ACCWGGT	2 cut(s)	2038, 2503
MaeI	CTAG	7 cut(s)	146, 1086, 2231, 2667, 3375, 3537, 4276
MaeII	ACGT	1 cut(s)	2343
MbiI	CCGCTC	1 cut(s)	23
MfeI	CAATTG	1 cut(s)	3999
MflI	RGATCY	9 cut(s)	1217, 1976, 2015, 2632, 2793, 3409, 3935, 4149, 4217
MhlI	GDGCHC	5 cut(s)	1398, 1697, 2753, 2922, 2966
MlsI	TGGCCA	1 cut(s)	4005
MluNI	TGGCCA	1 cut(s)	4005
MmeI	TCCRAC	5 cut(s)	621, 897, 1707, 2443, 2595
Mox20I	TGGCCA	1 cut(s)	4005
MroI	TCCGGA	1 cut(s)	3412
MroXI	GAANNNNTTC	3 cut(s)	350, 2139, 4179
MscI	TGGCCA	1 cut(s)	4005
MslI	CAYNNNNRTG	2 cut(s)	827, 3573
Msp20I	TGGCCA	1 cut(s)	4005
MspA1I	CMGCKG	5 cut(s)	593, 869, 1703, 3434, 4143
MspCI	CTTAAG	1 cut(s)	2164
MspI	CCGG	5 cut(s)	152, 227, 291, 360, 3413
MspR9I	CCNGG	8 cut(s)	105, 1981, 2040, 2505, 3905, 4007, 4061, 4242
MunI	CAATTG	1 cut(s)	3999
Mva1269I	GAATGC	3 cut(s)	1489, 1513, 3142
MvaI	CCWGG	8 cut(s)	105, 1981, 2040, 2505, 3905, 4007, 4061, 4242
NcoI	CCATGG	1 cut(s)	1459
NdeI	CATATG	1 cut(s)	3955
NlaIII	CATG	8 cut(s)	569, 797, 1073, 1463, 2720, 3572, 3710, 3838
NmeAIII	GCCGAG	1 cut(s)	3929
NspI	RCATGY	1 cut(s)	569
OliI	CACNNNNGTG	1 cut(s)	827
PaqCI	CACCTGC	1 cut(s)	1037
PasI	CCCWGGG	1 cut(s)	4060
PciSI	GCTCTTC	4 cut(s)	696, 1914, 2686, 2971
PcsI	WCGNNNNNNNCGW	1 cut(s)	1656
PctI	GAATGC	3 cut(s)	1489, 1513, 3142
PdmI	GAANNNNTTC	3 cut(s)	350, 2139, 4179
PshBI	ATTAAT	1 cut(s)	2388
Psp124BI	GAGCTC	2 cut(s)	1697, 2966
Psp6I	CCWGG	8 cut(s)	103, 1979, 2038, 2503, 3903, 4005, 4059, 4240
PspEI	GGTNACC	1 cut(s)	1775
PspFI	CCCAGC	2 cut(s)	1042, 3427
PspGI	CCWGG	8 cut(s)	103, 1979, 2038, 2503, 3903, 4005, 4059, 4240
PspOMI	GGGCCC	1 cut(s)	1394
PspPI	GGNCC	7 cut(s)	1394, 1395, 2432, 2741, 3425, 3565, 4057
PstI	CTGCAG	3 cut(s)	1702, 3013, 3093
PstNI	CAGNNNCTG	5 cut(s)	509, 1745, 3434, 3635, 3698
PsuI	RGATCY	9 cut(s)	1217, 1976, 2015, 2632, 2793, 3409, 3935, 4149, 4217
PvuII	CAGCTG	4 cut(s)	593, 869, 1703, 3434
RsaI	GTAC	9 cut(s)	1479, 1744, 2044, 2346, 2698, 3100, 3278, 3290, 3503
RsaNI	GTAC	9 cut(s)	1478, 1743, 2043, 2345, 2697, 3099, 3277, 3289, 3502
RseI	CAYNNNNRTG	2 cut(s)	827, 3573
SacI	GAGCTC	2 cut(s)	1697, 2966
SapI	GCTCTTC	4 cut(s)	696, 1914, 2686, 2971
Sau96I	GGNCC	7 cut(s)	1394, 1395, 2432, 2741, 3425, 3565, 4057
ScrFI	CCNGG	8 cut(s)	105, 1981, 2040, 2505, 3905, 4007, 4061, 4242
SduI	GDGCHC	5 cut(s)	1398, 1697, 2753, 2922, 2966
SexAI	ACCWGGT	2 cut(s)	2038, 2503
SfaNI	GCATC	1 cut(s)	3541
SfcI	CTRYAG	5 cut(s)	1698, 2079, 2193, 3009, 3089
SinI	GGWCC	3 cut(s)	2432, 2741, 3565
SmiMI	CAYNNNNRTG	2 cut(s)	827, 3573
SmlI	CTYRAG	6 cut(s)	2107, 2164, 2297, 2959, 3230, 3281
SmoI	CTYRAG	6 cut(s)	2107, 2164, 2297, 2959, 3230, 3281
SpeI	ACTAGT	1 cut(s)	2666
SspMI	CTAG	7 cut(s)	146, 1086, 2231, 2667, 3375, 3537, 4276
SstI	GAGCTC	2 cut(s)	1697, 2966
StyD4I	CCNGG	8 cut(s)	103, 1979, 2038, 2503, 3903, 4005, 4059, 4240
StyI	CCWWGG	4 cut(s)	234, 1459, 3556, 4090
TaiI	ACGT	1 cut(s)	2346
TaqI	TCGA	5 cut(s)	99, 407, 1995, 2893, 4154
TatI	WGTACW	2 cut(s)	1477, 2696
TauI	GCSGC	2 cut(s)	503, 2029
TscAI	CASTG	6 cut(s)	88, 1861, 1957, 2452, 3868, 4261
TspDTI	ATGAA	9 cut(s)	1455, 1578, 1677, 1857, 1875, 2048, 2987, 3362, 3371
TspGWI	ACGGA	3 cut(s)	232, 762, 830
TspRI	CASTG	6 cut(s)	88, 1861, 1957, 2452, 3868, 4261
Vha464I	CTTAAG	1 cut(s)	2164
VpaK11BI	GGWCC	3 cut(s)	2432, 2741, 3565
VspI	ATTAAT	1 cut(s)	2388
XapI	RAATTY	4 cut(s)	194, 2138, 2547, 3799
XceI	RCATGY	1 cut(s)	569
XcmI	CCANNNNNNNNNTGG	4 cut(s)	241, 1714, 2807, 4088
XmnI	GAANNNNTTC	3 cut(s)	350, 2139, 4179
XspI	CTAG	7 cut(s)	146, 1086, 2231, 2667, 3375, 3537, 4276

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.