Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0004317

Physical Location & Seq

Genomic Coordinates Reverse (-)

22708997 .. 22713132

Gene Structure 4136 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g22640.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4038 bp

ATGGAGTCCAAGCTTTTTGCTTCAGAGGAGGAGGCGCAGCACCTCTCAAACGCACCAGGTTCTTCATTTCTTTCTTCTCAGTACTCTGATATCGATGATTCATCGAAAACCCATGTTTCCAAAATTGATAATGACGAGAAATTTAGCGGGGTTGGTGGCGGTAGTGACGGTGGTGGGTCCGAGACGGAGGAGGGGTTTGTAAGCGGGGAGGAGGAGGATTTTGATTCCGAGAGGGCGTTTGTGAGAGGCGGAGATACCGTGGTGGTTGGAGGGGTGCAAGAGGATTCCGGTGTGAAGTTTGTTAACGCGTCGGAATTTTTCTATCCGACGAGTTCGAGTAGTCTGCGGCCGATTGCCAAGGTATCGGTGGATGATGACGACGGCGAGGAGGATGCGGGGGAGGAAGTGTTTATGGATTCGAAGAGTTTAGAGGGTGGGGGTCCTAAAGGTGTCGTTTTGGGGGATAGTGGGTTGGGGAAGAGTGAAAATTTGGGTGAAATGGTCAAGGAAAATGGTGTTAGTGGTGGTGAAGAAGATACGGTAATTGAGAATTCGAAATTGGTTGAGGGTTTGGGCTCGGTGGTGGAGGAAATCCCGGTGGTGGAGAAGCCGGTGGAGGGGGCTGAAGTAGATGATAAGAAGGCTGTAGAGCAGCCTAAGGAGGAGCATGTTTTCAATGGCGAAATGGAAGTTGTGAGAGAGAGTAAAGAAAATGGTGTGGTGGTGGATGGGCCAGCTGATGAGAAGTTGGTTGAGGTTGAAGAGAACGGAGTGGAGATTACAAGTGGAGGTGACTCAGTTGTGCAGGATATACATGCCAATTTGTCGCAGACAGGAGCAGCTGTTGTCGTTGGTGATGTAGAGACGATTGAGGAATCTGAAATAAAAGGCTTGGAGGTTGATGAAGTTGTGAGTTTGGATAATGGTTTTGATCAAATTAGCTGTGAGACCGAAGAACCAAATGACTTGGATTCTGAGCGTGACAGAGCGGTTGTTCCCAAGTCTGGGAATGTAGAACATGATGGAGAGAAAGCTGCTATTGTTGCTGGTGCGGATGAAGTTGATCTTGAGAAGAGGCCAGAAAGGAAGGATGAACTGAAATCTAATTTCGAAACCAGAGAGAAATGGCTGGCGACGGAATCGGGTGCTGATGTGATGTCAGATGACAAACCATCGGTAGGGGATGGAGCTGAAACGGAAACTGTGAACTTATCAGAACATGAACCGCAGATCGAGGCAAAACCGGAGAACGGTGACTTGAATGCACATGATGAAGTGCATGAATTGGAAGCGGCTGTCCGCGGAAAAAATGTGGCACCTGAATTTCTGGATTCAAGTTCTGATAGCCACGAAGTAAAGCTAGTTGAGGAAGTTGAGGAGAAGCATATCCCAGATGAAATTGGCTTTGAATCTGTGGATGCAAATTCCATTTCAAACAGAGAGATAAGAGTTGAAACTGATGATGACGGTGATAATGATCTTCAATATGATGATAAGGATCTTCAAGATGATGAAGGTGAGAATGAAGGTTCAGTTACAGATGCGAACAATGAAGGAATGATTTTTGGAAGCTCTGAGGCTGCTAAACAGTTTTTGGAAGAGTTGGAGCGAGGATCCCGTGGTGGTTCTTACTTAGGTGCTGACAGTTATCGTGATCATTCACAGAGAATTGATGGCCAGGTTGCCACGGATTCAGATGAAGAAGTGGACACAGATGAGGAAGGGGGCGGAAAAGAGTTATTTGATTCTGATGCACTGGCAGCTCTTCTGAAAGCCGCAACAGGTGCCTCCTCAGATGGTGGCAATGTTACCTTTACCACCCCAGATGGCTCCAGGCTTTTCTCTGTTGAGCGTCCTGCTGGGTTGGGATCCTCAGTCCGGTCGTTGAAACCTGCTTCCCGACCAAACAACTCAAACCTTTTTTCATCTTCCAATGTCACAGTTGGGGGCAGTTCTGAGAACTTGAGTGAAGAAGAGAAAGCGAAGCTCGAAAAGTTTCAGCAAATAAGGGTTAAGTTCTTGAGGCTTGTGCAGAGATTAGGTGTTTCTACAGAAGAGTCAGTACCAAGGCAGGTTCTATACCGCCTAGCTCTTGTTTCAGGGAGGCAAAACAGTCAAGAATTTAGCCTCGAAGCTGCAAAGATGACCGCTCTTCAGCTTGAAGCAGAGGAGAAGGATGATTTGGACTTCTCCTTGAACATACTGGTTCTTGGGAAGACAGGTGTTGGGAAAAGTGCCACTATAAATTCGATTTTTGGTGCAGAAGTGACCCCAATTAATGCTTTTGGACCTGGAACAACTACTGTGAAAGAAATTGTTGGAGTGGTGGATGGAGTCAAGATTAAGGTTTTTGATACACCGGGTCTGAAATCTGCTGCAATGGAACAGGGCATCAATCGCAAAATCTTATCTTCTGTGCAGAGGCGCATGAAAAAGTCCCCCCCAGATATTGTCCTCTATGTGGATCGGATGGACTCCCGAAGTAGGGATTTAAGTGATGTGCCATTGTTAAAATCAGTCACTAATGCCCTTGGTCCTTCAATTTGGCGAAGCACCATAGTGACTCTGACTCACAGCTCTTCTGCTCCTCCTGATGGACCATCAGGTTCCCCTCTGAATTATGAGATGTTTCGTAATCAGCGGGAGCAAATCATGCAGCAGACCATTGGACAAGCTAACCACCCATCTTGTCGGAAGAGAGATAATCAGAAAGTTCTCCCTAATGGTGTAGCTTGGAGATCCCATCTATTGCTCTTATGCTACTCTATGAAGATCTTGTCTGATGCGTCTAATCTCTCCAAACCTCCGGAATCATTCGATCACCGTAAGCTCTTTGGTTTGCGTTCCCGTTCGGCTCCTCTTCCATACTTGTTGTCTTGGTTGTTGCAATCTCGTCCACACCCAAAACTTGCTACCGATCAATCTGGTGACAATGCTGATTCAGACATTGACTTGGCTGACTTGTCTGATTCTGATCAAGAGGAAGAGGAGGATGAGTATGATCAGCTTCCGTCATTTAAGCCTCTCAAGAAGGCTCAGATTGCTAAGCTTAGCAGAGAGCAGAGGAAGGCGTACGCTGAGGAGTACGATTATAGGGTTAAGCTCCTCCAGAAGAAGATGTGGAAAGAGGAGTTGAGAAGGATGAAAGAAATGAAGAAGAAGGGCAAGGTCAGTGAAGAGGAGTATGGTTATTTGGCAGCCGTGCCGGTTGCATTATCTGATATGGTTTTGCCGCCTTCTTTTGATGGTGAAAATCCAGCTTACAGGTACCGGTTCTTGGAGCCGACTTCTCAGTTCACGGCAAGGCCAGTGTTGGACTCCCAAGGCTGGGACCATGACTGTGGGTACGATGGTGTCAACCTTGAACATAGTCTGGCCATTGCTAATTCTTTTCCGGCAGCTGTTGCTGTTCAGCTTACAAAGGATAAGAAAGAGTTCAATATTCATTTAGAGTCCTCGGTTGGTGCTAAGCACGGGGAGAAGTGGTCGAGTATGCTAGGGTTTGACATTCAGAACATGGGAAAGCAACTTGCATACATTGTCCGAGGAGACACCAAAGTCAAAACTTCCAAGAGGTTCAAGAATGCTGCCGGAGTATCAGTGACATTCTTGGGTGAAAATGTGTCCACTGGATTCAAACTTGAACAGGAGTATGCGGTTGGCAAGCGCCTGCTATTGGTGGGTACTACTGGTACTGTCCGATCTCAGGGCGACTCAGCATATGGAGCAAATTTGGAGGTGCGGCTGAGGGAAGCAGATTTTCCGATCGGCCAGGATCAATCCTCATTGGGTCTGTCTCTAGTGCGGTGGAGGGGCGACTTGGCCCTGGGGGCAAATCTCCAGTCCCAGTTTTCCCTCGGGCGCAACTACAAGATGGCTGTTCGTGCAGGGTTGAACAACAAGCGCAGTGGATCGATCTCAATCAGAACAAGCAGCTCCGAACAACTCCAACTCGCGCTCATTGCTGTGATTCCGGTTGTCAAGGCTATCTACAACAGCATCTGGCCCAGAGCCAGTGAGAACTACTCCATCTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003924 GO:0004888 GO:0004930 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006605 GO:0006810 GO:0006886 GO:0007154 GO:0007165 GO:0007186 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009707 GO:0009941 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017038 GO:0017111 GO:0019867 GO:0023052 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0038023 GO:0042170 GO:0042886 GO:0043021 GO:0043024 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0050896 GO:0051087 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055085 GO:0060089 GO:0061927 GO:0065002 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AIG1 TOC159_MAD

Protein Analysis

1346

Amino Acids

146.53

Weight (kDa)

4.63

Isoelectric Point (pI)

45.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02482 AT4G02510 AT4G02510 AT4G02510 AT4G02510
fragaria_vesca	FvH4_2g25480
malus_domestica	MD03G1285700.v1.1 MD11G1305100.v1.1
prunus_persica	Prupe.8G258800_v2.0.a1 Prupe.8G258800_v2.0.a1
pyrus_communis	pycom03g22640 pycom11g26690
rosa_chinensis	RchiOBHm_Chr6g0293691
rosa_laevigata	RLG00000011932
rosa_multiflora	Rmu_co8307375.1_g000001 Rmu_co8497971.1_g000001 Rmu_sc0005431.1_g000009
rosa_roxburghii	Rroxscaffold_7G00173980
rosa_rugosa	Rorug06G0237500 Rorug06G0237500
rosa_samantha	Rh4AG062400 Rh4AG063400 Rh4AG067300 Rh4BG061800 Rh4CG068100 Rh4DG056700 Rh6AG350100 Rh6BG357600 Rh6CG364400 Rh6DG351300
rosa_wichuraiana	Rw0G022990 Rw6G030480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	3557
Acc36I	ACCTGC	2 cut(s)	1900, 2062
Acc65I	GGTACC	1 cut(s)	3267
AccB1I	GGYRCC	3 cut(s)	1315, 1784, 3267
AccBSI	CCGCTC	2 cut(s)	989, 2150
AccII	CGCG	3 cut(s)	308, 1302, 3956
AccIII	TCCGGA	1 cut(s)	2806
AclWI	GGATC	9 cut(s)	1506, 1608, 1621, 1863, 1876, 2472, 2733, 3783, 3919
AcoI	YGGCCR	4 cut(s)	347, 1675, 3375, 3769
AcsI	RAATTY	9 cut(s)	140, 314, 487, 550, 1322, 1423, 2120, 2245, 3730
AcuI	CTGAAG	3 cut(s)	6, 645, 2138
AfaI	GTAC	8 cut(s)	83, 2064, 3074, 3086, 3269, 3347, 3685, 3694
AflIII	ACRYGT	1 cut(s)	306
AgeI	ACCGGT	1 cut(s)	3270
AjnI	CCWGG	6 cut(s)	55, 1677, 1832, 2290, 3771, 3825
AjuI	GAANNNNNNNTTGG	4 cut(s)	542, 574, 2165, 2197
AleI	CACNNNNGTG	1 cut(s)	2558
Alw26I	GTCTC	5 cut(s)	176, 857, 941, 3543, 3801
AlwI	GGATC	9 cut(s)	1506, 1608, 1621, 1863, 1876, 2472, 2733, 3783, 3919
AlwNI	CAGNNNCTG	1 cut(s)	4002
Ama87I	CYCGRG	1 cut(s)	3857
Aor13HI	TCCGGA	1 cut(s)	2806
AoxI	GGCC	9 cut(s)	347, 731, 1076, 1675, 3305, 3375, 3769, 3822, 4004
ApoI	RAATTY	9 cut(s)	140, 314, 487, 550, 1322, 1423, 2120, 2245, 3730
ArsI	GACNNNNNNTTYG	2 cut(s)	3827, 3859
AseI	ATTAAT	1 cut(s)	2277
AsiGI	ACCGGT	1 cut(s)	3270
Asp700I	GAANNNNTTC	2 cut(s)	1995, 3434
Asp718I	GGTACC	1 cut(s)	3267
AspLEI	GCGC	6 cut(s)	37, 2427, 3669, 3864, 3906, 3958
AspS9I	GGNCC	9 cut(s)	177, 440, 731, 2288, 2534, 2597, 3331, 3823, 4005
AsuC2I	CCSGG	2 cut(s)	596, 2361
AsuII	TTCGAA	3 cut(s)	419, 554, 1110
AvaI	CYCGRG	1 cut(s)	3857
AvaII	GGWCC	6 cut(s)	177, 440, 2288, 2534, 2597, 3331
AxyI	CCTNAGG	1 cut(s)	657
BaeI	ACNNNNGTAYC	4 cut(s)	246, 279, 3337, 3370
BalI	TGGCCA	2 cut(s)	1677, 3377
BamHI	GGATCC	2 cut(s)	1613, 1868
BanI	GGYRCC	3 cut(s)	1315, 1784, 3267
BanII	GRGCYC	1 cut(s)	578
BarI	GAAGNNNNNNTAC	2 cut(s)	2046, 2078
BbsI	GAAGAC	1 cut(s)	2222
BbvCI	CCTCAGC	2 cut(s)	3078, 3746
BceAI	ACGGC	3 cut(s)	397, 3185, 3315
BcgI	CGANNNNNNTGC	4 cut(s)	325, 359, 374, 408
BciT130I	CCWGG	6 cut(s)	57, 1679, 1834, 2292, 3773, 3827
BclI	TGATCA	4 cut(s)	931, 1654, 2974, 3001
BcnI	CCSGG	2 cut(s)	596, 2361
BcoDI	GTCTC	5 cut(s)	176, 857, 941, 3543, 3801
BfaI	CTAG	4 cut(s)	1361, 2087, 3497, 3800
BfmI	CTRYAG	2 cut(s)	645, 2049
BfoI	RGCGCY	1 cut(s)	3670
BfuAI	ACCTGC	2 cut(s)	1900, 2062
BglI	GCCNNNNNGGC	1 cut(s)	3830
BglII	AGATCT	1 cut(s)	2772
BlpI	GCTNAGC	3 cut(s)	3045, 3050, 3468
BmcAI	AGTACT	1 cut(s)	83
Bme1390I	CCNGG	8 cut(s)	57, 596, 1679, 1834, 2292, 2361, 3773, 3827
Bme18I	GGWCC	6 cut(s)	177, 440, 2288, 2534, 2597, 3331
BmeT110I	CYCGRG	1 cut(s)	3857
BmgT120I	GGNCC	9 cut(s)	177, 440, 731, 2288, 2534, 2597, 3331, 3823, 4005
BmrFI	CCNGG	8 cut(s)	57, 596, 1679, 1834, 2292, 2361, 3773, 3827
BmrI	ACTGGG	1 cut(s)	3841
BmsI	GCATC	7 cut(s)	382, 1408, 1531, 1741, 2400, 2773, 4008
BmuI	ACTGGG	1 cut(s)	3841
BpiI	GAAGAC	1 cut(s)	2222
BplI	GAGNNNNNCTC	1 cut(s)	4010
BpmI	CTGGAG	3 cut(s)	1816, 3092, 3824
Bpu10I	CCTNAGC	2 cut(s)	3078, 3746
Bpu1102I	GCTNAGC	3 cut(s)	3045, 3050, 3468
Bpu14I	TTCGAA	3 cut(s)	419, 554, 1110
BpuEI	CTTGAG	4 cut(s)	1088, 1984, 2041, 3011
BpuMI	CCSGG	2 cut(s)	596, 2361
Bsa29I	ATCGAT	2 cut(s)	93, 3914
BsaBI	GATNNNNATC	4 cut(s)	1476, 1497, 2973, 3920
BsaI	GGTCTC	1 cut(s)	941
BsaWI	WCCGGW	6 cut(s)	287, 1243, 1878, 2806, 3270, 3973
Bse118I	RCCGGY	3 cut(s)	610, 3205, 3270
Bse1I	ACTGG	8 cut(s)	1761, 2208, 3308, 3634, 3694, 3841, 3847, 4014
Bse21I	CCTNAGG	1 cut(s)	657
Bse3DI	GCAATG	4 cut(s)	1810, 2385, 3378, 3960
Bse8I	GATNNNNATC	4 cut(s)	1476, 1497, 2973, 3920
BseAI	TCCGGA	1 cut(s)	2806
BseBI	CCWGG	6 cut(s)	57, 1679, 1834, 2292, 3773, 3827
BseCI	ATCGAT	2 cut(s)	93, 3914
BseJI	GATNNNNATC	4 cut(s)	1476, 1497, 2973, 3920
BseMI	GCAATG	4 cut(s)	1810, 2385, 3378, 3960
BseNI	ACTGG	8 cut(s)	1761, 2208, 3308, 3634, 3694, 3841, 3847, 4014
BseX3I	CGGCCG	1 cut(s)	347
BseYI	CCCAGC	2 cut(s)	1859, 3327
BsgI	GTGCAG	5 cut(s)	824, 2051, 2280, 2438, 3906
Bsh1236I	CGCG	3 cut(s)	308, 1302, 3956
Bsh1285I	CGRYCG	3 cut(s)	350, 1883, 3768
BshFI	GGCC	9 cut(s)	349, 733, 1078, 1677, 3307, 3377, 3771, 3824, 4006
BshNI	GGYRCC	3 cut(s)	1315, 1784, 3267
BshTI	ACCGGT	1 cut(s)	3270
BshVI	ATCGAT	2 cut(s)	93, 3914
BsiEI	CGRYCG	3 cut(s)	350, 1883, 3768
BsiHKCI	CYCGRG	1 cut(s)	3857
BsiWI	CGTACG	1 cut(s)	3072
BslFI	GGGAC	3 cut(s)	2422, 3344, 3829
BsmAI	GTCTC	5 cut(s)	176, 857, 941, 3543, 3801
BsmBI	CGTCTC	2 cut(s)	176, 857
BsmFI	GGGAC	3 cut(s)	2422, 3344, 3829
BsmI	GAATGC	2 cut(s)	1267, 3589
BsnI	GGCC	9 cut(s)	349, 733, 1078, 1677, 3307, 3377, 3771, 3824, 4006
Bso31I	GGTCTC	1 cut(s)	941
BsoBI	CYCGRG	1 cut(s)	3857
Bsp119I	TTCGAA	3 cut(s)	419, 554, 1110
Bsp1286I	GDGCHC	1 cut(s)	578
Bsp13I	TCCGGA	1 cut(s)	2806
Bsp1720I	GCTNAGC	3 cut(s)	3045, 3050, 3468
BspANI	GGCC	9 cut(s)	349, 733, 1078, 1677, 3307, 3377, 3771, 3824, 4006
BspDI	ATCGAT	2 cut(s)	93, 3914
BspEI	TCCGGA	1 cut(s)	2806
BspFNI	CGCG	3 cut(s)	308, 1302, 3956
BspMI	ACCTGC	2 cut(s)	1900, 2062
BspPI	GGATC	9 cut(s)	1506, 1608, 1621, 1863, 1876, 2472, 2733, 3783, 3919
BspQI	GCTCTTC	3 cut(s)	1770, 2157, 2584
BspT104I	TTCGAA	3 cut(s)	419, 554, 1110
BspT107I	GGYRCC	3 cut(s)	1315, 1784, 3267
BspTNI	GGTCTC	1 cut(s)	941
BsrBI	CCGCTC	2 cut(s)	989, 2150
BsrDI	GCAATG	4 cut(s)	1810, 2385, 3378, 3960
BsrFI	RCCGGY	3 cut(s)	610, 3205, 3270
BsrI	ACTGG	8 cut(s)	1761, 2208, 3308, 3634, 3694, 3841, 3847, 4014
BssAI	RCCGGY	3 cut(s)	610, 3205, 3270
BssT1I	CCWWGG	4 cut(s)	357, 2066, 2530, 3322
Bst2UI	CCWGG	6 cut(s)	57, 1679, 1834, 2292, 3773, 3827
BstAPI	GCANNNNNTGC	3 cut(s)	1784, 2653, 3404
BstBI	TTCGAA	3 cut(s)	419, 554, 1110
BstC8I	GCNNGC	4 cut(s)	735, 1131, 3665, 3671
BstDSI	CCRYGG	4 cut(s)	258, 1300, 1618, 1686
BstFNI	CGCG	3 cut(s)	308, 1302, 3956
BstH2I	RGCGCY	1 cut(s)	3670
BstHHI	GCGC	6 cut(s)	37, 2427, 3669, 3864, 3906, 3958
BstMAI	GTCTC	5 cut(s)	176, 857, 941, 3543, 3801
BstMCI	CGRYCG	3 cut(s)	350, 1883, 3768
BstNI	CCWGG	6 cut(s)	57, 1679, 1834, 2292, 3773, 3827
BstNSI	RCATGY	2 cut(s)	671, 818
BstSCI	CCNGG	8 cut(s)	55, 594, 1677, 1832, 2290, 2359, 3771, 3825
BstSFI	CTRYAG	2 cut(s)	645, 2049
BstUI	CGCG	3 cut(s)	308, 1302, 3956
BstV2I	GAAGAC	1 cut(s)	2222
BstX2I	RGATCY	5 cut(s)	1498, 1613, 1868, 2738, 2772
BstXI	CCANNNNNNTGG	1 cut(s)	3341
BstYI	RGATCY	5 cut(s)	1498, 1613, 1868, 2738, 2772
BstZI	CGGCCG	1 cut(s)	347
Bsu15I	ATCGAT	2 cut(s)	93, 3914
Bsu36I	CCTNAGG	1 cut(s)	657
BsuRI	GGCC	9 cut(s)	349, 733, 1078, 1677, 3307, 3377, 3771, 3824, 4006
BsuTUI	ATCGAT	2 cut(s)	93, 3914
BtgI	CCRYGG	4 cut(s)	258, 1300, 1618, 1686
BtsI	GCAGTG	1 cut(s)	3913
BtsIMutI	CAGTG	7 cut(s)	1754, 3178, 3315, 3606, 3627, 3913, 4021
BveI	ACCTGC	2 cut(s)	1900, 2062
Cac8I	GCNNGC	4 cut(s)	735, 1131, 3665, 3671
CaiI	CAGNNNCTG	1 cut(s)	4002
CfoI	GCGC	6 cut(s)	37, 2427, 3669, 3864, 3906, 3958
Cfr10I	RCCGGY	3 cut(s)	610, 3205, 3270
Cfr13I	GGNCC	9 cut(s)	177, 440, 731, 2288, 2534, 2597, 3331, 3823, 4005
Cfr42I	CCGCGG	1 cut(s)	1303
ClaI	ATCGAT	2 cut(s)	93, 3914
CseI	GACGC	3 cut(s)	297, 1841, 2775
CsiI	ACCWGGT	1 cut(s)	55
Csp6I	GTAC	8 cut(s)	82, 2063, 3073, 3085, 3268, 3346, 3684, 3693
CspAI	ACCGGT	1 cut(s)	3270
CspCI	CAANNNNNGTGG	4 cut(s)	2669, 2704, 3889, 3924
CviQI	GTAC	8 cut(s)	82, 2063, 3073, 3085, 3268, 3346, 3684, 3693
DrdI	GACNNNNNNGTC	1 cut(s)	3557
DseDI	GACNNNNNNGTC	1 cut(s)	3557
EaeI	YGGCCR	4 cut(s)	347, 1675, 3375, 3769
EagI	CGGCCG	1 cut(s)	347
EciI	GGCGGA	2 cut(s)	264, 1743
EclXI	CGGCCG	1 cut(s)	347
Eco130I	CCWWGG	4 cut(s)	357, 2066, 2530, 3322
Eco24I	GRGCYC	1 cut(s)	578
Eco31I	GGTCTC	1 cut(s)	941
Eco32I	GATATC	1 cut(s)	91
Eco47I	GGWCC	6 cut(s)	177, 440, 2288, 2534, 2597, 3331
Eco52I	CGGCCG	1 cut(s)	347
Eco57I	CTGAAG	3 cut(s)	6, 645, 2138
Eco81I	CCTNAGG	1 cut(s)	657
Eco88I	CYCGRG	1 cut(s)	3857
EcoO109I	RGGNCCY	1 cut(s)	440
EcoRI	GAATTC	1 cut(s)	550
EcoRII	CCWGG	6 cut(s)	55, 1677, 1832, 2290, 3771, 3825
EcoRV	GATATC	1 cut(s)	91
EcoT14I	CCWWGG	4 cut(s)	357, 2066, 2530, 3322
EcoT38I	GRGCYC	1 cut(s)	578
ErhI	CCWWGG	4 cut(s)	357, 2066, 2530, 3322
Esp3I	CGTCTC	2 cut(s)	176, 857
FalI	AAGNNNNNCTT	2 cut(s)	1050, 1082
FaqI	GGGAC	3 cut(s)	2422, 3344, 3829
FauI	CCCGC	4 cut(s)	140, 197, 388, 2634
FauNDI	CATATG	1 cut(s)	3721
FbaI	TGATCA	4 cut(s)	931, 1654, 2974, 3001
FriOI	GRGCYC	1 cut(s)	578
FspBI	CTAG	4 cut(s)	1361, 2087, 3497, 3800
GlaI	GCGC	6 cut(s)	36, 2426, 3668, 3863, 3905, 3957
GsaI	CCCAGC	2 cut(s)	1863, 3331
GsuI	CTGGAG	3 cut(s)	1816, 3092, 3824
HaeII	RGCGCY	1 cut(s)	3670
HaeIII	GGCC	9 cut(s)	349, 733, 1078, 1677, 3307, 3377, 3771, 3824, 4006
HgaI	GACGC	3 cut(s)	297, 1841, 2775
HhaI	GCGC	6 cut(s)	37, 2427, 3669, 3864, 3906, 3958
Hin6I	GCGC	6 cut(s)	35, 2425, 3667, 3862, 3904, 3956
HinP1I	GCGC	6 cut(s)	35, 2425, 3667, 3862, 3904, 3956
HincII	GTYRAC	2 cut(s)	304, 3358
HindII	GTYRAC	2 cut(s)	304, 3358
HindIII	AAGCTT	2 cut(s)	11, 3047
HpaI	GTTAAC	1 cut(s)	304
Hpy166II	GTNNAC	7 cut(s)	304, 1207, 1708, 2897, 3297, 3358, 3627
Hpy8I	GTNNAC	7 cut(s)	304, 1207, 1708, 2897, 3297, 3358, 3627
Hpy99I	CGWCG	4 cut(s)	313, 331, 383, 1138
HspAI	GCGC	6 cut(s)	35, 2425, 3667, 3862, 3904, 3956
Kpn2I	TCCGGA	1 cut(s)	2806
KpnI	GGTACC	1 cut(s)	3271
Ksp22I	TGATCA	4 cut(s)	931, 1654, 2974, 3001
KspAI	GTTAAC	1 cut(s)	304
KspI	CCGCGG	1 cut(s)	1303
LguI	GCTCTTC	3 cut(s)	1770, 2157, 2584
LweI	GCATC	7 cut(s)	382, 1408, 1531, 1741, 2400, 2773, 4008
MabI	ACCWGGT	1 cut(s)	55
MaeI	CTAG	4 cut(s)	1361, 2087, 3497, 3800
MbiI	CCGCTC	2 cut(s)	989, 2150
MflI	RGATCY	5 cut(s)	1498, 1613, 1868, 2738, 2772
MhlI	GDGCHC	1 cut(s)	578
MlsI	TGGCCA	2 cut(s)	1677, 3377
MluI	ACGCGT	1 cut(s)	306
MluNI	TGGCCA	2 cut(s)	1677, 3377
MmeI	TCCRAC	8 cut(s)	247, 291, 350, 1584, 2299, 2672, 3294, 3973
Mox20I	TGGCCA	2 cut(s)	1677, 3377
MroI	TCCGGA	1 cut(s)	2806
MroXI	GAANNNNTTC	2 cut(s)	1995, 3434
MscI	TGGCCA	2 cut(s)	1677, 3377
MseI	TTAA	8 cut(s)	303, 2013, 2277, 2343, 2492, 2510, 3018, 3099
MslI	CAYNNNNRTG	3 cut(s)	2558, 3339, 3965
Msp20I	TGGCCA	2 cut(s)	1677, 3377
MspA1I	CMGCKG	5 cut(s)	737, 842, 1302, 2641, 3401
MspR9I	CCNGG	8 cut(s)	57, 596, 1679, 1834, 2292, 2361, 3773, 3827
Mva1269I	GAATGC	2 cut(s)	1267, 3589
MvaI	CCWGG	6 cut(s)	57, 1679, 1834, 2292, 3773, 3827
MvnI	CGCG	3 cut(s)	308, 1302, 3956
NciI	CCSGG	2 cut(s)	596, 2361
NdeI	CATATG	1 cut(s)	3721
NspI	RCATGY	2 cut(s)	671, 818
NspV	TTCGAA	3 cut(s)	419, 554, 1110
OliI	CACNNNNGTG	1 cut(s)	2558
PasI	CCCWGGG	1 cut(s)	3826
PciSI	GCTCTTC	3 cut(s)	1770, 2157, 2584
PctI	GAATGC	2 cut(s)	1267, 3589
PdmI	GAANNNNTTC	2 cut(s)	1995, 3434
Pfl23II	CGTACG	1 cut(s)	3072
PinAI	ACCGGT	1 cut(s)	3270
Ple19I	CGATCG	1 cut(s)	3768
PpuMI	RGGWCCY	1 cut(s)	440
PshBI	ATTAAT	1 cut(s)	2277
Psp5II	RGGWCCY	1 cut(s)	440
Psp6I	CCWGG	6 cut(s)	55, 1677, 1832, 2290, 3771, 3825
PspFI	CCCAGC	2 cut(s)	1859, 3327
PspGI	CCWGG	6 cut(s)	55, 1677, 1832, 2290, 3771, 3825
PspLI	CGTACG	1 cut(s)	3072
PspPI	GGNCC	9 cut(s)	177, 440, 731, 2288, 2534, 2597, 3331, 3823, 4005
PspPPI	RGGWCCY	1 cut(s)	440
PstNI	CAGNNNCTG	1 cut(s)	4002
PsuI	RGATCY	5 cut(s)	1498, 1613, 1868, 2738, 2772
PvuI	CGATCG	1 cut(s)	3768
PvuII	CAGCTG	3 cut(s)	737, 842, 3401
RsaI	GTAC	8 cut(s)	83, 2064, 3074, 3086, 3269, 3347, 3685, 3694
RsaNI	GTAC	8 cut(s)	82, 2063, 3073, 3085, 3268, 3346, 3684, 3693
RseI	CAYNNNNRTG	3 cut(s)	2558, 3339, 3965
SacII	CCGCGG	1 cut(s)	1303
SapI	GCTCTTC	3 cut(s)	1770, 2157, 2584
SaqAI	TTAA	8 cut(s)	303, 2013, 2277, 2343, 2492, 2510, 3018, 3099
Sau96I	GGNCC	9 cut(s)	177, 440, 731, 2288, 2534, 2597, 3331, 3823, 4005
ScaI	AGTACT	1 cut(s)	83
ScrFI	CCNGG	8 cut(s)	57, 596, 1679, 1834, 2292, 2361, 3773, 3827
SduI	GDGCHC	1 cut(s)	578
SexAI	ACCWGGT	1 cut(s)	55
SfaNI	GCATC	7 cut(s)	382, 1408, 1531, 1741, 2400, 2773, 4008
SfcI	CTRYAG	2 cut(s)	645, 2049
Sfr303I	CCGCGG	1 cut(s)	1303
SfuI	TTCGAA	3 cut(s)	419, 554, 1110
SgrBI	CCGCGG	1 cut(s)	1303
SinI	GGWCC	6 cut(s)	177, 440, 2288, 2534, 2597, 3331
SmiMI	CAYNNNNRTG	3 cut(s)	2558, 3339, 3965
SmlI	CTYRAG	4 cut(s)	1067, 1963, 2020, 3026
SmoI	CTYRAG	4 cut(s)	1067, 1963, 2020, 3026
SspI	AATATT	1 cut(s)	3442
SspMI	CTAG	4 cut(s)	1361, 2087, 3497, 3800
StyD4I	CCNGG	8 cut(s)	55, 594, 1677, 1832, 2290, 2359, 3771, 3825
StyI	CCWWGG	4 cut(s)	357, 2066, 2530, 3322
TaqII	GACCGA	1 cut(s)	965
TatI	WGTACW	1 cut(s)	81
TauI	GCSGC	5 cut(s)	349, 1295, 1778, 3235, 3745
Tru1I	TTAA	8 cut(s)	303, 2013, 2277, 2343, 2492, 2510, 3018, 3099
Tru9I	TTAA	8 cut(s)	303, 2013, 2277, 2343, 2492, 2510, 3018, 3099
TscAI	CASTG	7 cut(s)	1761, 3178, 3315, 3606, 3634, 3913, 4021
TspGWI	ACGGA	6 cut(s)	200, 783, 1151, 1211, 1703, 3000
TspRI	CASTG	7 cut(s)	1761, 3178, 3315, 3606, 3634, 3913, 4021
VpaK11BI	GGWCC	6 cut(s)	177, 440, 2288, 2534, 2597, 3331
VspI	ATTAAT	1 cut(s)	2277
XapI	RAATTY	9 cut(s)	140, 314, 487, 550, 1322, 1423, 2120, 2245, 3730
XceI	RCATGY	2 cut(s)	671, 818
XcmI	CCANNNNNNNNNTGG	1 cut(s)	364
XmnI	GAANNNNTTC	2 cut(s)	1995, 3434
XspI	CTAG	4 cut(s)	1361, 2087, 3497, 3800
ZrmI	AGTACT	1 cut(s)	83

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.