Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0001232

Physical Location & Seq

Genomic Coordinates Forward (+)

18951606 .. 18955515

Gene Structure 3910 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g20900.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGGGGAAAGTAACAGAAGAACACATTGAAGCTCGTGTCAAACAACTCCTATCTCGTATGACTTTGAAAGAAAAGGTTGGCCAGATGACCCAAATTGAGCGCCAGGTCGCCACTCCAGCTGCCATTAGAGACCACTCCATAGGGAGTATATTCAGTGGTCTGGGCAACGTGCCCTGTGAAAAGGCTTTGCCGTCAGAGTGGGCGGATATGGTGGATGGGCTTCAGAGGTCTGCGCTAACGTCGCGGCTTGGGATTCCCCTCATATATGGGACTGATGCGGTTCATGGCAACGGTAATTCTTATGGTGCTACTATATTCCCTCACAACGGTGGTCTTGGCGCCACCAGAGATGCAGATTTGGCACGAAGGATTGGTGTGGCAACTGCTCTTGAAACCAGGGCTTGTGGTTTTCACTATACTTTCGCTCCCTGTGTGGCTGTATGCAAGGATCCGAGATGGGGAAGATGCTACGAGAGTTACAGTGAAGATACTGAAATTGTAAGCAAGATGACGTCTATTGTTTCAGGCTTGCAGGGGCAACCTCCCCAAGGACATCCGAAGGGCTACCCTTTTATGGCGGGAAGCAACAACACTATTGCATCTGCCAAGCATTTTGTTGGAGAAGGGGGCACAGACAAAGGTGTAAATGAGGGGAATGCTGTATTATCTTATGACGATTTAGAGAGGATTCATATGAAACCTTATCTGGACTGTATTTCTCAAGGAGTTTGTACTATTATGGCTTCCTATAACAGCTGGAATGGAGATAGAGTACATGGTCACCGTTTTCTCCTTACAGAAATCTTGAAAGATAAGATAGGTTTTAAGGGAATTTTGATTTCTGACTGGGAAGGAATTGACCAACTTTGCGAACCTGAAGGTTCAGACTATCGTTTATGCATTTCCTTAGCCATTAATGCAGGAATAGACATGGTCATGGTGCCTTTCAGATATGAAAAATTCATCGAGGAATTAATTTATCTTGTGGAATCCAGGGAGGTACCAATGTCTAGGATAGATGATGCTGTTGCAAGAATACTGAGAGTGAAGTTTGTTGCTGGTGTTTTCGAACATCCCTTTGCTGATAAATCTTTACAGGACGCAGTTGGTTGCAAGCTGCACAGAGATCTAGCACGTGAAGCAGTTCGCAGGTCATTGGTTCTATTGAAGAATGGAAAGGACCCAATGAAACCTTTTCTTCCATTAGACAGAAATGCTAAAAGAATACTTGTTGCTGGAACTCATGCCGATGATCTTGGAAATCAATGTGGAGGATGGACGGCTACAAAATATGGTAGCAGCGGCCAGATAACAATCGGGACAACCATCTTGGAAGCTATTAAGATGGCAGTCGGAGATGATACAGAAATAATTTACGAGAAATATTCGTCAGCAGACACCCTAGCACGTCAAGATATCTCTTTTGCGATTGTGGTCGTTGGTGAAGCTCCGTATGCAGAAGACAGGGGTTATAGTTCAGAGCTTGTGATCCCGTTCAATGGAACTGATGTCATAAGCTCGATTGCTGACAGAATTCCCGTCTTGGCGATTCTAATTTCTGGAAGACCCCTAGTTTTAGAGCCCTGGCTCTTGGAAAAGATGGATGCTCTTGTTGCTGCTTGGCTCCCTGGTACTGAAGGAGAGGGAATTGTAGATGCAATCTTTGGAGATTTTGACTTCGAGGGTAGACTCCCGGTGACATGGTTTAAAAGGGTTGAACAACTGCCTATGCATGCTGCAGACCCTTTATATCCTCTTGGCTTTGGGATGACATACAATAAGGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0000323 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005886 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0015926 GO:0016020 GO:0016052 GO:0016787 GO:0016798 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0071944 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

596

Amino Acids

65.21

Weight (kDa)

5.49

Isoelectric Point (pI)

34.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001232)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47000 AT3G47000 AT3G47000 AT3G47010 AT3G47010 AT3G47010 AT3G47040 AT3G47040 AT3G47040 AT3G47050
fragaria_vesca	FvH4_3g38160 FvH4_3g38160 FvH4_4g11940
malus_domestica	MD02G1242000.v1.1 MD02G1242100.v1.1 MD02G1242200.v1.1 MD02G1242300.v1.1 MD11G1080700.v1.1
prunus_persica	Prupe.2G092300_v2.0.a1 Prupe.2G092300_v2.0.a1 Prupe.2G092300_v2.0.a1 Prupe.2G092600_v2.0.a1 Prupe.2G092900_v2.0.a1 Prupe.2G092900_v2.0.a1 Prupe.6G061000_v2.0.a1 Prupe.6G061000_v2.0.a1 Prupe.6G061000_v2.0.a1 Prupe.6G061000_v2.0.a1 Prupe.6G061000_v2.0.a1
pyrus_communis	pycom02g20900 pycom11g06800 pycom11g06860
rosa_chinensis	RchiOBHm_Chr5g0068591 RchiOBHm_Chr6g0246121
rosa_laevigata	RLG00000035983 RLG00000036820 RLG00000036839
rosa_multiflora	Rmu_sc0004721.1_g000003
rosa_roxburghii	Rroxscaffold_1G00003560 Rroxscaffold_1G00012260 Rroxscaffold_3G00247860 Rroxscaffold_7G00214870
rosa_rugosa	Rorug05G0391700 Rorug05G0464600 Rorug05G0465200 Rorug05G0465800
rosa_samantha	Rh5AG449400 Rh5BG467600 Rh5DG481000 Rh5DG551200 Rh5DG552100 Rh7AG258000 Rh7CG274700 Rh7DG265200
rosa_wichuraiana	Rw5G041960 Rw5G048090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	515
Acc36I	ACCTGC	1 cut(s)	1140
Acc65I	GGTACC	1 cut(s)	1000
AccB1I	GGYRCC	3 cut(s)	338, 940, 1000
AccI	GTMKAC	1 cut(s)	1687
AccII	CGCG	1 cut(s)	244
AciI	CCGC	5 cut(s)	203, 244, 278, 578, 1302
AclWI	GGATC	3 cut(s)	443, 456, 1483
AcoI	YGGCCR	2 cut(s)	79, 1303
AcsI	RAATTY	3 cut(s)	831, 959, 1533
AcuI	CTGAAG	3 cut(s)	206, 897, 1656
AcvI	CACGTG	1 cut(s)	1136
AcyI	GRCGYC	2 cut(s)	339, 512
AfaI	GTAC	4 cut(s)	733, 774, 1002, 1633
AfiI	CCNNNNNNNGG	5 cut(s)	326, 458, 548, 574, 1499
AgsI	TTSAA	7 cut(s)	29, 67, 392, 808, 1168, 1498, 1718
AjiI	CACGTC	1 cut(s)	1409
AjnI	CCWGG	5 cut(s)	102, 395, 992, 1583, 1627
AleI	CACNNNNGTG	1 cut(s)	327
AluBI	AGCT	8 cut(s)	32, 119, 756, 1117, 1337, 1448, 1483, 1518
AluI	AGCT	8 cut(s)	32, 119, 756, 1117, 1337, 1448, 1483, 1518
Alw26I	GTCTC	1 cut(s)	123
AlwI	GGATC	3 cut(s)	443, 456, 1483
AoxI	GGCC	2 cut(s)	79, 1303
ApeKI	GCWGC	5 cut(s)	119, 1117, 1299, 1616, 1736
ApoI	RAATTY	3 cut(s)	831, 959, 1533
AseI	ATTAAT	2 cut(s)	915, 974
Asp700I	GAANNNNTTC	1 cut(s)	1143
Asp718I	GGTACC	1 cut(s)	1000
AspLEI	GCGC	3 cut(s)	102, 235, 341
AspS9I	GGNCC	1 cut(s)	1180
AsuC2I	CCSGG	1 cut(s)	1694
AsuHPI	GGTGA	3 cut(s)	773, 1454, 1708
AsuII	TTCGAA	1 cut(s)	1068
AvaII	GGWCC	1 cut(s)	1180
BaeGI	GKGCMC	2 cut(s)	174, 632
BaeI	ACNNNNGTAYC	2 cut(s)	992, 1025
BalI	TGGCCA	1 cut(s)	81
BamHI	GGATCC	1 cut(s)	448
BanI	GGYRCC	3 cut(s)	338, 940, 1000
BanII	GRGCYC	1 cut(s)	1584
BauI	CACGAG	1 cut(s)	33
BbrPI	CACGTG	1 cut(s)	1136
BbsI	GAAGAC	2 cut(s)	1467, 1570
BbvI	GCAGC	5 cut(s)	106, 1104, 1311, 1603, 1723
BccI	CCATC	6 cut(s)	209, 450, 1269, 1334, 1339, 1594
BceAI	ACGGC	2 cut(s)	175, 1296
BciT130I	CCWGG	5 cut(s)	104, 397, 994, 1585, 1629
BcnI	CCSGG	1 cut(s)	1694
BcoDI	GTCTC	1 cut(s)	123
BfaI	CTAG	4 cut(s)	1011, 1130, 1403, 1571
BfmI	CTRYAG	1 cut(s)	1737
BfoI	RGCGCY	2 cut(s)	103, 342
BfuAI	ACCTGC	1 cut(s)	1140
BglII	AGATCT	1 cut(s)	1126
BisI	GCNGC	7 cut(s)	120, 245, 1118, 1300, 1303, 1617, 1737
BlsI	GCNGC	7 cut(s)	121, 246, 1119, 1301, 1304, 1618, 1738
Bme1390I	CCNGG	6 cut(s)	104, 397, 994, 1585, 1629, 1694
Bme18I	GGWCC	1 cut(s)	1180
BmgBI	CACGTC	1 cut(s)	1409
BmgT120I	GGNCC	1 cut(s)	1180
BmiI	GGNNCC	6 cut(s)	340, 450, 942, 1002, 1182, 1625
BmrFI	CCNGG	6 cut(s)	104, 397, 994, 1585, 1629, 1694
BmrI	ACTGGG	1 cut(s)	856
BmsI	GCATC	7 cut(s)	265, 340, 455, 608, 1012, 1594, 1645
BmuI	ACTGGG	1 cut(s)	856
BpiI	GAAGAC	2 cut(s)	1467, 1570
BpmI	CTGGAG	1 cut(s)	99
Bpu10I	CCTNAGC	1 cut(s)	907
Bpu14I	TTCGAA	1 cut(s)	1068
BpuEI	CTTGAG	1 cut(s)	705
BpuMI	CCSGG	1 cut(s)	1694
BsaAI	YACGTR	1 cut(s)	1136
BsaBI	GATNNNNATC	1 cut(s)	1313
BsaHI	GRCGYC	2 cut(s)	339, 512
BsaI	GGTCTC	1 cut(s)	123
BsaJI	CCNNGG	5 cut(s)	396, 547, 993, 1583, 1627
BsaXI	ACNNNNNCTCC	4 cut(s)	409, 439, 756, 786
Bsc4I	CCNNNNNNNGG	5 cut(s)	326, 458, 548, 574, 1499
Bse1I	ACTGG	1 cut(s)	851
Bse8I	GATNNNNATC	1 cut(s)	1313
BseBI	CCWGG	5 cut(s)	104, 397, 994, 1585, 1629
BseDI	CCNNGG	5 cut(s)	396, 547, 993, 1583, 1627
BseGI	GGATG	6 cut(s)	220, 553, 1072, 1280, 1609, 1773
BseJI	GATNNNNATC	1 cut(s)	1313
BseLI	CCNNNNNNNGG	5 cut(s)	326, 458, 548, 574, 1499
BseMII	CTCAG	1 cut(s)	1031
BseNI	ACTGG	1 cut(s)	851
BseSI	GKGCMC	2 cut(s)	174, 632
BseXI	GCAGC	5 cut(s)	106, 1104, 1311, 1603, 1723
BsgI	GTGCAG	1 cut(s)	1103
Bsh1236I	CGCG	1 cut(s)	244
BshFI	GGCC	2 cut(s)	81, 1305
BshNI	GGYRCC	3 cut(s)	338, 940, 1000
BsiSI	CCGG	1 cut(s)	1694
BslFI	GGGAC	2 cut(s)	283, 1333
BslI	CCNNNNNNNGG	5 cut(s)	326, 458, 548, 574, 1499
BsmAI	GTCTC	1 cut(s)	123
BsmFI	GGGAC	2 cut(s)	283, 1333
BsmI	GAATGC	1 cut(s)	661
BsnI	GGCC	2 cut(s)	81, 1305
Bso31I	GGTCTC	1 cut(s)	123
Bsp119I	TTCGAA	1 cut(s)	1068
Bsp1286I	GDGCHC	3 cut(s)	174, 632, 1584
Bsp143I	GATC	4 cut(s)	448, 1126, 1252, 1488
BspACI	CCGC	5 cut(s)	203, 244, 278, 578, 1302
BspANI	GGCC	2 cut(s)	81, 1305
BspCNI	CTCAG	1 cut(s)	1032
BspFNI	CGCG	1 cut(s)	244
BspLI	GGNNCC	6 cut(s)	340, 450, 942, 1002, 1182, 1625
BspMAI	CTGCAG	1 cut(s)	1741
BspMI	ACCTGC	1 cut(s)	1140
BspPI	GGATC	3 cut(s)	443, 456, 1483
BspT104I	TTCGAA	1 cut(s)	1068
BspT107I	GGYRCC	3 cut(s)	338, 940, 1000
BspTNI	GGTCTC	1 cut(s)	123
BsrI	ACTGG	1 cut(s)	851
BssECI	CCNNGG	5 cut(s)	396, 547, 993, 1583, 1627
BssMI	GATC	4 cut(s)	448, 1126, 1252, 1488
BssNI	GRCGYC	2 cut(s)	339, 512
BssSI	CACGAG	1 cut(s)	33
BssT1I	CCWWGG	1 cut(s)	547
Bst2BI	CACGAG	1 cut(s)	33
Bst2UI	CCWGG	5 cut(s)	104, 397, 994, 1585, 1629
Bst4CI	ACNGT	5 cut(s)	293, 329, 482, 713, 785
BstACI	GRCGYC	2 cut(s)	339, 512
BstBAI	YACGTR	1 cut(s)	1136
BstBI	TTCGAA	1 cut(s)	1068
BstC8I	GCNNGC	3 cut(s)	530, 1115, 1734
BstDEI	CTNAG	2 cut(s)	907, 1040
BstEII	GGTNACC	1 cut(s)	779
BstENI	CCTNNNNNAGG	1 cut(s)	546
BstF5I	GGATG	6 cut(s)	220, 553, 1072, 1280, 1609, 1773
BstFNI	CGCG	1 cut(s)	244
BstH2I	RGCGCY	2 cut(s)	103, 342
BstHHI	GCGC	3 cut(s)	102, 235, 341
BstKTI	GATC	4 cut(s)	451, 1129, 1255, 1491
BstMAI	GTCTC	1 cut(s)	123
BstMBI	GATC	4 cut(s)	448, 1126, 1252, 1488
BstMWI	GCNNNNNNNGC	7 cut(s)	116, 241, 359, 917, 1139, 1454, 1613
BstNI	CCWGG	5 cut(s)	104, 397, 994, 1585, 1629
BstNSI	RCATGY	1 cut(s)	1736
BstPI	GGTNACC	1 cut(s)	779
BstSCI	CCNGG	6 cut(s)	102, 395, 992, 1583, 1627, 1692
BstSFI	CTRYAG	1 cut(s)	1737
BstSLI	GKGCMC	2 cut(s)	174, 632
BstUI	CGCG	1 cut(s)	244
BstV1I	GCAGC	5 cut(s)	106, 1104, 1311, 1603, 1723
BstV2I	GAAGAC	2 cut(s)	1467, 1570
BstX2I	RGATCY	2 cut(s)	448, 1126
BstYI	RGATCY	2 cut(s)	448, 1126
BsuRI	GGCC	2 cut(s)	81, 1305
BtrI	CACGTC	1 cut(s)	1409
BtsCI	GGATG	6 cut(s)	220, 553, 1072, 1280, 1609, 1773
BtsIMutI	CAGTG	2 cut(s)	160, 487
BveI	ACCTGC	1 cut(s)	1140
Cac8I	GCNNGC	3 cut(s)	530, 1115, 1734
CfoI	GCGC	3 cut(s)	102, 235, 341
Cfr13I	GGNCC	1 cut(s)	1180
CseI	GACGC	1 cut(s)	1109
Csp6I	GTAC	4 cut(s)	732, 773, 1001, 1632
CviAII	CATG	7 cut(s)	284, 776, 931, 937, 1244, 1701, 1733
CviQI	GTAC	4 cut(s)	732, 773, 1001, 1632
DdeI	CTNAG	2 cut(s)	907, 1040
DinI	GGCGCC	1 cut(s)	340
DpnI	GATC	4 cut(s)	450, 1128, 1254, 1490
DpnII	GATC	4 cut(s)	448, 1126, 1252, 1488
DraI	TTTAAA	1 cut(s)	1708
EaeI	YGGCCR	2 cut(s)	79, 1303
EciI	GGCGGA	1 cut(s)	218
Eco130I	CCWWGG	1 cut(s)	547
Eco24I	GRGCYC	1 cut(s)	1584
Eco31I	GGTCTC	1 cut(s)	123
Eco32I	GATATC	1 cut(s)	1417
Eco47I	GGWCC	1 cut(s)	1180
Eco57I	CTGAAG	3 cut(s)	206, 897, 1656
Eco72I	CACGTG	1 cut(s)	1136
Eco91I	GGTNACC	1 cut(s)	779
EcoNI	CCTNNNNNAGG	1 cut(s)	546
EcoO109I	RGGNCCY	1 cut(s)	1180
EcoO65I	GGTNACC	1 cut(s)	779
EcoRI	GAATTC	1 cut(s)	1533
EcoRII	CCWGG	5 cut(s)	102, 395, 992, 1583, 1627
EcoRV	GATATC	1 cut(s)	1417
EcoT14I	CCWWGG	1 cut(s)	547
EcoT22I	ATGCAT	2 cut(s)	902, 1734
EcoT38I	GRGCYC	1 cut(s)	1584
EgeI	GGCGCC	1 cut(s)	340
EheI	GGCGCC	1 cut(s)	340
ErhI	CCWWGG	1 cut(s)	547
FaeI	CATG	7 cut(s)	287, 779, 934, 940, 1247, 1704, 1736
FaqI	GGGAC	2 cut(s)	283, 1333
FatI	CATG	7 cut(s)	283, 775, 930, 936, 1243, 1700, 1732
FauI	CCCGC	1 cut(s)	571
FauNDI	CATATG	1 cut(s)	693
FblI	GTMKAC	1 cut(s)	1687
Fnu4HI	GCNGC	7 cut(s)	120, 245, 1118, 1300, 1303, 1617, 1737
FokI	GGATG	6 cut(s)	227, 540, 1059, 1287, 1616, 1780
FriOI	GRGCYC	1 cut(s)	1584
Fsp4HI	GCNGC	7 cut(s)	120, 245, 1118, 1300, 1303, 1617, 1737
FspBI	CTAG	4 cut(s)	1011, 1130, 1403, 1571
GlaI	GCGC	3 cut(s)	101, 234, 340
GluI	GCNGC	7 cut(s)	120, 245, 1118, 1300, 1303, 1617, 1737
GsuI	CTGGAG	1 cut(s)	99
HaeII	RGCGCY	2 cut(s)	103, 342
HaeIII	GGCC	2 cut(s)	81, 1305
HapII	CCGG	1 cut(s)	1694
HgaI	GACGC	1 cut(s)	1109
HhaI	GCGC	3 cut(s)	102, 235, 341
Hin1I	GRCGYC	2 cut(s)	339, 512
Hin1II	CATG	7 cut(s)	287, 779, 934, 940, 1247, 1704, 1736
Hin6I	GCGC	3 cut(s)	100, 233, 339
HinP1I	GCGC	3 cut(s)	100, 233, 339
HinfI	GANTC	5 cut(s)	253, 688, 989, 1549, 1689
HpaII	CCGG	1 cut(s)	1694
HphI	GGTGA	3 cut(s)	773, 1454, 1708
Hpy166II	GTNNAC	1 cut(s)	1688
Hpy188I	TCNGA	9 cut(s)	196, 225, 453, 558, 844, 886, 950, 1355, 1480
Hpy188III	TCNNGA	6 cut(s)	389, 707, 805, 1318, 1412, 1560
Hpy8I	GTNNAC	1 cut(s)	1688
Hpy99I	CGWCG	1 cut(s)	244
HpyAV	CCTTC	6 cut(s)	360, 553, 617, 845, 872, 1631
HpyCH4III	ACNGT	5 cut(s)	293, 329, 482, 713, 785
HpyCH4IV	ACGT	5 cut(s)	168, 239, 512, 1135, 1408
HpyF10VI	GCNNNNNNNGC	7 cut(s)	116, 241, 359, 917, 1139, 1454, 1613
HpyF3I	CTNAG	2 cut(s)	907, 1040
HpySE526I	ACGT	5 cut(s)	168, 239, 512, 1135, 1408
Hsp92I	GRCGYC	2 cut(s)	339, 512
Hsp92II	CATG	7 cut(s)	287, 779, 934, 940, 1247, 1704, 1736
HspAI	GCGC	3 cut(s)	100, 233, 339
KasI	GGCGCC	1 cut(s)	338
KpnI	GGTACC	1 cut(s)	1004
Kzo9I	GATC	4 cut(s)	448, 1126, 1252, 1488
LmnI	GCTCC	3 cut(s)	430, 1453, 1629
Lsp1109I	GCAGC	5 cut(s)	106, 1104, 1311, 1603, 1723
LweI	GCATC	7 cut(s)	265, 340, 455, 608, 1012, 1594, 1645
MaeI	CTAG	4 cut(s)	1011, 1130, 1403, 1571
MaeII	ACGT	5 cut(s)	168, 239, 512, 1135, 1408
MaeIII	GTNAC	4 cut(s)	10, 476, 779, 1696
MalI	GATC	4 cut(s)	450, 1128, 1254, 1490
MboI	GATC	4 cut(s)	448, 1126, 1252, 1488
MboII	GAAGA	7 cut(s)	29, 474, 497, 1180, 1190, 1472, 1575
MflI	RGATCY	2 cut(s)	448, 1126
MhlI	GDGCHC	3 cut(s)	174, 632, 1584
MlsI	TGGCCA	1 cut(s)	81
MluNI	TGGCCA	1 cut(s)	81
Mly113I	GGCGCC	1 cut(s)	339
MlyI	GAGTC	1 cut(s)	1683
MmeI	TCCRAC	2 cut(s)	598, 1333
Mox20I	TGGCCA	1 cut(s)	81
Mph1103I	ATGCAT	2 cut(s)	902, 1734
MroXI	GAANNNNTTC	1 cut(s)	1143
MscI	TGGCCA	1 cut(s)	81
MseI	TTAA	5 cut(s)	825, 915, 974, 1341, 1707
MslI	CAYNNNNRTG	3 cut(s)	327, 935, 1248
Msp20I	TGGCCA	1 cut(s)	81
MspA1I	CMGCKG	3 cut(s)	119, 756, 1302
MspI	CCGG	1 cut(s)	1694
MspR9I	CCNGG	6 cut(s)	104, 397, 994, 1585, 1629, 1694
Mva1269I	GAATGC	1 cut(s)	661
MvaI	CCWGG	5 cut(s)	104, 397, 994, 1585, 1629
MvnI	CGCG	1 cut(s)	244
MwoI	GCNNNNNNNGC	7 cut(s)	116, 241, 359, 917, 1139, 1454, 1613
NarI	GGCGCC	1 cut(s)	339
NciI	CCSGG	1 cut(s)	1694
NdeI	CATATG	1 cut(s)	693
NdeII	GATC	4 cut(s)	448, 1126, 1252, 1488
NlaIII	CATG	7 cut(s)	287, 779, 934, 940, 1247, 1704, 1736
NlaIV	GGNNCC	6 cut(s)	340, 450, 942, 1002, 1182, 1625
NmuCI	GTSAC	2 cut(s)	779, 1696
NsiI	ATGCAT	2 cut(s)	902, 1734
NspI	RCATGY	1 cut(s)	1736
NspV	TTCGAA	1 cut(s)	1068
OliI	CACNNNNGTG	1 cut(s)	327
PaeI	GCATGC	1 cut(s)	1736
PctI	GAATGC	1 cut(s)	661
PdmI	GAANNNNTTC	1 cut(s)	1143
PfeI	GAWTC	4 cut(s)	253, 688, 989, 1549
PflFI	GACNNNGTC	1 cut(s)	932
PkrI	GCNGC	7 cut(s)	121, 246, 1119, 1301, 1304, 1618, 1738
PleI	GAGTC	1 cut(s)	1683
PluTI	GGCGCC	1 cut(s)	342
PmaCI	CACGTG	1 cut(s)	1136
PmlI	CACGTG	1 cut(s)	1136
PpsI	GAGTC	1 cut(s)	1683
Ppu21I	YACGTR	1 cut(s)	1136
PpuMI	RGGWCCY	1 cut(s)	1180
PshBI	ATTAAT	2 cut(s)	915, 974
Psp5II	RGGWCCY	1 cut(s)	1180
Psp6I	CCWGG	5 cut(s)	102, 395, 992, 1583, 1627
PspCI	CACGTG	1 cut(s)	1136
PspEI	GGTNACC	1 cut(s)	779
PspGI	CCWGG	5 cut(s)	102, 395, 992, 1583, 1627
PspN4I	GGNNCC	6 cut(s)	340, 450, 942, 1002, 1182, 1625
PspPI	GGNCC	1 cut(s)	1180
PspPPI	RGGWCCY	1 cut(s)	1180
PstI	CTGCAG	1 cut(s)	1741
PsuI	RGATCY	2 cut(s)	448, 1126
PsyI	GACNNNGTC	1 cut(s)	932
PvuII	CAGCTG	2 cut(s)	119, 756
RsaI	GTAC	4 cut(s)	733, 774, 1002, 1633
RsaNI	GTAC	4 cut(s)	732, 773, 1001, 1632
RseI	CAYNNNNRTG	3 cut(s)	327, 935, 1248
SaqAI	TTAA	5 cut(s)	825, 915, 974, 1341, 1707
SatI	GCNGC	7 cut(s)	120, 245, 1118, 1300, 1303, 1617, 1737
Sau3AI	GATC	4 cut(s)	448, 1126, 1252, 1488
Sau96I	GGNCC	1 cut(s)	1180
SchI	GAGTC	1 cut(s)	1683
ScrFI	CCNGG	6 cut(s)	104, 397, 994, 1585, 1629, 1694
SduI	GDGCHC	3 cut(s)	174, 632, 1584
SfaNI	GCATC	7 cut(s)	265, 340, 455, 608, 1012, 1594, 1645
SfcI	CTRYAG	1 cut(s)	1737
SfoI	GGCGCC	1 cut(s)	340
SfuI	TTCGAA	1 cut(s)	1068
SinI	GGWCC	1 cut(s)	1180
SmiMI	CAYNNNNRTG	3 cut(s)	327, 935, 1248
SmlI	CTYRAG	1 cut(s)	720
SmoI	CTYRAG	1 cut(s)	720
SphI	GCATGC	1 cut(s)	1736
SsiI	CCGC	5 cut(s)	203, 244, 278, 578, 1302
SspDI	GGCGCC	1 cut(s)	338
SspI	AATATT	1 cut(s)	1385
SspMI	CTAG	4 cut(s)	1011, 1130, 1403, 1571
StyD4I	CCNGG	6 cut(s)	102, 395, 992, 1583, 1627, 1692
StyI	CCWWGG	1 cut(s)	547
TaaI	ACNGT	5 cut(s)	293, 329, 482, 713, 785
TaiI	ACGT	5 cut(s)	171, 242, 515, 1138, 1411
TaqI	TCGA	4 cut(s)	966, 1068, 1520, 1680
TatI	WGTACW	2 cut(s)	731, 772
TauI	GCSGC	2 cut(s)	247, 1305
TfiI	GAWTC	4 cut(s)	253, 688, 989, 1549
Tru1I	TTAA	5 cut(s)	825, 915, 974, 1341, 1707
Tru9I	TTAA	5 cut(s)	825, 915, 974, 1341, 1707
TscAI	CASTG	2 cut(s)	160, 487
TseFI	GTSAC	2 cut(s)	779, 1696
TseI	GCWGC	5 cut(s)	119, 1117, 1299, 1616, 1736
Tsp45I	GTSAC	2 cut(s)	779, 1696
TspDTI	ATGAA	6 cut(s)	272, 680, 710, 952, 969, 1202
TspGWI	ACGGA	1 cut(s)	1440
TspRI	CASTG	2 cut(s)	160, 487
Tth111I	GACNNNGTC	1 cut(s)	932
VpaK11BI	GGWCC	1 cut(s)	1180
VspI	ATTAAT	2 cut(s)	915, 974
XagI	CCTNNNNNAGG	1 cut(s)	546
XapI	RAATTY	3 cut(s)	831, 959, 1533
XceI	RCATGY	1 cut(s)	1736
XmiI	GTMKAC	1 cut(s)	1687
XmnI	GAANNNNTTC	1 cut(s)	1143
XspI	CTAG	4 cut(s)	1011, 1130, 1403, 1571
ZraI	GACGTC	1 cut(s)	513
Zsp2I	ATGCAT	2 cut(s)	902, 1734

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.