Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0001232

Physical Location & Seq

Genomic Coordinates Reverse (-)

65520342 .. 65525042

Gene Structure 4701 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00214870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1995 bp

ATGCTGCATTTCAACTCTAGCGGCTACCGCGTTATCAACTTCACTAGACCTATCAGTTTTCTTACCTGGTCTCTTGCGGAGGAGCTTATTGGATACCTCCTCAAGATGGAAGAAGTTGAGGACTTGAATTACATATACAGAAACCGAAATGAACCCATTGAAGCTCGGGTCAAGGACCTCCTTTCTCGCATGAGTTTGGAAGAAAAGGTGGGCCAGATGACCCTGATAGAGCGTCGGGTCGCTACCCCTTCTGCCATTAGAGACTTCTCAATCGGCAGTATATTCAGCTGTGCAGGAAGTGGGCCCTTCAGGAATGCCTTATCGGCGGACTGGGCCGAGATGGTTGACGAGTTTCAGAGGTCTGCACTAGAAACCCGGCTCGGGATCCCATTGATGTATGGGAATGATGCGGTGCACGGGAGCAATAGTCTGTATGGTACCACTATATTTCCTCACAATATTGGTCTTGGAGCTACTGGAGATGCGGATTTAGTTCAAAGGATTGGTGCGGCAACTGCTCTTGAAGTTAGGGCGAGTGGCATCCATTGGACTTTTGCTCCCTGTGTGGCTGTATGCAGAGATCCCAGATGGGAAAGTTGCTATCAGAGTTACAGTGAAGACACTGAAATTGTTAGGAAGATGACATCGATTATTTCAGGCTTGCAGGGGAAGCCGCCCCAAGGACATGAAAAGGGCTACCCTTTTGTAATGGGAAGAAACAACATTATTGCCTGTTCCAAGCATTTTGTTGGAGATGGGGGTACAGATAAAGGTGACGATGAGGGAAATACCATATCATCTTACAGTGACTTAGAGAGGATTCATATGGCACCTTATATAGATTGTATTTCTCAAGGAGTTTCCAGTATCATGGCATCTTATTCCAGCTGGAATGGAGATAGACTACATGCTCATCATTTTCTCCTAACAGAAATCTTGAAAGCTAAGTTGGGTTTTAAGGGAGCTGTGATTTCTAACTGGGATGGACTTAGCAGACTTAGCACACCTCGAGGGTCAGAGAGTCGTTCCTGCATTATATCTGCCATTAATGCTGGGATTGACATGGTTATGGTGCCTTTCAGATTTAAAGATTTTGTGAATGATTTAGTATATCTGGTGAAAAATGAAGACATACTAGAGTCCAGGATAGATGATGCTGTTGAAAGAATACTCAGAGTGAAGTTCGTTGCTGGTCTTTTGAGAATCCCTTTTCTGATAGATCTTTGCTGGACAGAGTTGGTTGCAAGGTGCTTACCTAAACAATGCAAAGTCATCCCATCTTATATTCCCCTGCTGCATAGAGATCTAGCACGTGAAGCTGTTCGCAAGTCCTTGGTTCTGCTGAAGAATGGAAAGGAACCATGGAAACCTTTTCTTCCGTTAGATAGAAAAGCGGAAAGAATACTTGTCTGTGGAACGCACGCTGATGATCTTGGATATCAGTGTGGAGAATGGACAGGTACTCGCGTTGCGAAAAGTGGAAGGATCACAATCGGCACAACCATCTTGGGAGCTATTAAGAAGGCAGTTGGAAACGAAACAGAAATCATTTATGAGAAATATCCATCAACGGACACCCTAGCACGTGAAGATATCTCTTTTGCAGTTGTTGCTGTTGGTGAAGATCCAAATGCCGAGTTTGGGTATGCGGCTGCCAAATCGGAGCTTGTGATCTCTTTTAATGGACCGGATGTCATAAGCTCAGTTGCTGACAGAATCCCAACATTGGTGATTCTGATATCTGGAAGACCCTTAACTGTAGAGCCAAGTCTCTTGGAAAAGATGGATGCACTTGTTGCTGCTTGGTTGCCTGGTAGTGAAGGAGAGGGAATTGCGGATGTCATCTTCGGAGATTATAATTTTGAGGGCCAACTACCGATGACATGGTTTAAAAGTGTTGAACAGCTCCCATCGAATGTTGGAAGTAGCTCATATGACCCTTTATATCCTGTTGGCTTTGGATTGACATCCAATAAGGAGAAAGTTATACAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0000323 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005886 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0015926 GO:0016020 GO:0016052 GO:0016787 GO:0016798 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0071944 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

664

Amino Acids

73.38

Weight (kDa)

5.56

Isoelectric Point (pI)

32.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	66 - 393	4.7e-68	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	445 - 656	7.2e-36	Glycosyl hydrolase family 3 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001232)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47000 AT3G47000 AT3G47000 AT3G47010 AT3G47010 AT3G47010 AT3G47040 AT3G47040 AT3G47040 AT3G47050
fragaria_vesca	FvH4_3g38160 FvH4_3g38160 FvH4_4g11940
malus_domestica	MD02G1242000.v1.1 MD02G1242100.v1.1 MD02G1242200.v1.1 MD02G1242300.v1.1 MD11G1080700.v1.1
prunus_persica	Prupe.2G092300_v2.0.a1 Prupe.2G092300_v2.0.a1 Prupe.2G092300_v2.0.a1 Prupe.2G092600_v2.0.a1 Prupe.2G092900_v2.0.a1 Prupe.2G092900_v2.0.a1 Prupe.6G061000_v2.0.a1 Prupe.6G061000_v2.0.a1 Prupe.6G061000_v2.0.a1 Prupe.6G061000_v2.0.a1 Prupe.6G061000_v2.0.a1
pyrus_communis	pycom02g20900 pycom11g06800 pycom11g06860
rosa_chinensis	RchiOBHm_Chr5g0068591 RchiOBHm_Chr6g0246121
rosa_laevigata	RLG00000035983 RLG00000036820 RLG00000036839
rosa_multiflora	Rmu_sc0004721.1_g000003
rosa_roxburghii	Rroxscaffold_1G00003560 Rroxscaffold_1G00012260 Rroxscaffold_3G00247860 Rroxscaffold_7G00214870
rosa_rugosa	Rorug05G0391700 Rorug05G0464600 Rorug05G0465200 Rorug05G0465800
rosa_samantha	Rh5AG449400 Rh5BG467600 Rh5DG481000 Rh5DG551200 Rh5DG552100 Rh7AG258000 Rh7CG274700 Rh7DG265200
rosa_wichuraiana	Rw5G041960 Rw5G048090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1857
AbsI	CCTCGAGG	1 cut(s)	1008
Acc65I	GGTACC	1 cut(s)	437
AccB1I	GGYRCC	3 cut(s)	437, 829, 1072
AccII	CGCG	2 cut(s)	30, 1467
AclWI	GGATC	5 cut(s)	379, 392, 575, 1493, 1619
AcuI	CTGAAG	2 cut(s)	292, 1364
AcvI	CACGTG	2 cut(s)	1313, 1586
AfaI	GTAC	3 cut(s)	439, 763, 1462
AfiI	CCNNNNNNNGG	5 cut(s)	106, 381, 680, 1641, 1726
AgsI	TTSAA	8 cut(s)	13, 127, 161, 497, 524, 940, 1163, 1901
AhdI	GACNNNNNGTC	1 cut(s)	1691
AjnI	CCWGG	3 cut(s)	65, 1142, 1810
AjuI	GAANNNNNNNTTGG	2 cut(s)	932, 964
Alw21I	GWGCWC	1 cut(s)	417
Alw26I	GTCTC	3 cut(s)	75, 255, 1775
Alw44I	GTGCAC	1 cut(s)	413
AlwI	GGATC	5 cut(s)	379, 392, 575, 1493, 1619
AlwNI	CAGNNNCTG	1 cut(s)	1709
Ama87I	CYCGRG	3 cut(s)	165, 380, 1008
AoxI	GGCC	4 cut(s)	211, 302, 333, 1867
ApaI	GGGCCC	1 cut(s)	306
ApaLI	GTGCAC	1 cut(s)	413
ApeKI	GCWGC	4 cut(s)	4, 1294, 1652, 1799
AseI	ATTAAT	1 cut(s)	1047
Asp700I	GAANNNNTTC	1 cut(s)	1320
Asp718I	GGTACC	1 cut(s)	437
AspS9I	GGNCC	7 cut(s)	175, 211, 302, 303, 333, 1685, 1867
AsuC2I	CCSGG	1 cut(s)	376
AsuHPI	GGTGA	4 cut(s)	785, 1129, 1631, 1741
AvaI	CYCGRG	3 cut(s)	165, 380, 1008
AvaII	GGWCC	2 cut(s)	175, 1685
BaeGI	GKGCMC	2 cut(s)	306, 417
BaeI	ACNNNNGTAYC	2 cut(s)	1452, 1485
BamHI	GGATCC	1 cut(s)	384
BanI	GGYRCC	3 cut(s)	437, 829, 1072
BanII	GRGCYC	1 cut(s)	306
BbrPI	CACGTG	2 cut(s)	1313, 1586
BbsI	GAAGAC	3 cut(s)	624, 1134, 1753
Bbv12I	GWGCWC	1 cut(s)	417
BbvI	GCAGC	3 cut(s)	1281, 1639, 1786
BciT130I	CCWGG	3 cut(s)	67, 1144, 1812
BciVI	GTATCC	1 cut(s)	86
BcnI	CCSGG	1 cut(s)	376
BcoDI	GTCTC	3 cut(s)	75, 255, 1775
BfaI	CTAG	6 cut(s)	18, 45, 368, 1136, 1307, 1580
BfmI	CTRYAG	1 cut(s)	1758
BfuI	GTATCC	1 cut(s)	86
BglI	GCCNNNNNGGC	1 cut(s)	323
BglII	AGATCT	2 cut(s)	1219, 1303
BisI	GCNGC	8 cut(s)	5, 22, 510, 674, 1295, 1650, 1653, 1800
BlsI	GCNGC	8 cut(s)	6, 23, 511, 675, 1296, 1651, 1654, 1801
Bme1390I	CCNGG	4 cut(s)	67, 376, 1144, 1812
Bme18I	GGWCC	2 cut(s)	175, 1685
BmeRI	GACNNNNNGTC	1 cut(s)	1691
BmeT110I	CYCGRG	3 cut(s)	165, 380, 1008
BmgT120I	GGNCC	7 cut(s)	175, 211, 302, 303, 333, 1685, 1867
BmiI	GGNNCC	6 cut(s)	304, 386, 439, 831, 1074, 1359
BmrFI	CCNGG	4 cut(s)	67, 376, 1144, 1812
BmrI	ACTGGG	2 cut(s)	340, 988
BmsI	GCATC	6 cut(s)	397, 472, 549, 884, 1144, 1777
BmuI	ACTGGG	2 cut(s)	340, 988
BpiI	GAAGAC	3 cut(s)	624, 1134, 1753
BpmI	CTGGAG	1 cut(s)	498
BpuEI	CTTGAG	2 cut(s)	86, 837
BpuMI	CCSGG	1 cut(s)	376
Bsa29I	ATCGAT	1 cut(s)	647
BsaAI	YACGTR	2 cut(s)	1313, 1586
BsaBI	GATNNNNATC	2 cut(s)	1490, 1966
BsaI	GGTCTC	1 cut(s)	75
BsaJI	CCNNGG	3 cut(s)	679, 1332, 1361
BsaWI	WCCGGW	1 cut(s)	1687
BsaXI	ACNNNNNCTCC	4 cut(s)	412, 442, 541, 571
Bsc4I	CCNNNNNNNGG	5 cut(s)	106, 381, 680, 1641, 1726
Bse1I	ACTGG	4 cut(s)	335, 481, 864, 983
Bse8I	GATNNNNATC	2 cut(s)	1490, 1966
BseBI	CCWGG	3 cut(s)	67, 1144, 1812
BseCI	ATCGAT	1 cut(s)	647
BseDI	CCNNGG	3 cut(s)	679, 1332, 1361
BseGI	GGATG	7 cut(s)	540, 988, 1272, 1696, 1792, 1843, 1967
BseJI	GATNNNNATC	2 cut(s)	1490, 1966
BseLI	CCNNNNNNNGG	5 cut(s)	106, 381, 680, 1641, 1726
BseMII	CTCAG	2 cut(s)	1186, 1716
BseNI	ACTGG	4 cut(s)	335, 481, 864, 983
BseRI	GAGGAG	2 cut(s)	89, 95
BseSI	GKGCMC	2 cut(s)	306, 417
BseXI	GCAGC	3 cut(s)	1281, 1639, 1786
BseYI	CCCAGC	1 cut(s)	1052
BsgI	GTGCAG	2 cut(s)	312, 348
Bsh1236I	CGCG	2 cut(s)	30, 1467
BshFI	GGCC	4 cut(s)	213, 304, 335, 1869
BshNI	GGYRCC	3 cut(s)	437, 829, 1072
BshVI	ATCGAT	1 cut(s)	647
BsiHKAI	GWGCWC	1 cut(s)	417
BsiHKCI	CYCGRG	3 cut(s)	165, 380, 1008
BsiSI	CCGG	2 cut(s)	376, 1688
BslI	CCNNNNNNNGG	5 cut(s)	106, 381, 680, 1641, 1726
BsmAI	GTCTC	3 cut(s)	75, 255, 1775
BsmI	GAATGC	1 cut(s)	319
BsnI	GGCC	4 cut(s)	213, 304, 335, 1869
Bso31I	GGTCTC	1 cut(s)	75
BsoBI	CYCGRG	3 cut(s)	165, 380, 1008
Bsp120I	GGGCCC	1 cut(s)	302
Bsp1286I	GDGCHC	2 cut(s)	306, 417
Bsp143I	GATC	8 cut(s)	384, 580, 1219, 1303, 1429, 1485, 1624, 1671
Bsp19I	CCATGG	1 cut(s)	1361
BspANI	GGCC	4 cut(s)	213, 304, 335, 1869
BspCNI	CTCAG	2 cut(s)	1185, 1715
BspDI	ATCGAT	1 cut(s)	647
BspFNI	CGCG	2 cut(s)	30, 1467
BspLI	GGNNCC	6 cut(s)	304, 386, 439, 831, 1074, 1359
BspPI	GGATC	5 cut(s)	379, 392, 575, 1493, 1619
BspT107I	GGYRCC	3 cut(s)	437, 829, 1072
BspTNI	GGTCTC	1 cut(s)	75
BsrI	ACTGG	4 cut(s)	335, 481, 864, 983
BssECI	CCNNGG	3 cut(s)	679, 1332, 1361
BssMI	GATC	8 cut(s)	384, 580, 1219, 1303, 1429, 1485, 1624, 1671
BssT1I	CCWWGG	3 cut(s)	679, 1332, 1361
Bst2UI	CCWGG	3 cut(s)	67, 1144, 1812
Bst4CI	ACNGT	4 cut(s)	614, 806, 1759, 1992
BstAPI	GCANNNNNTGC	2 cut(s)	1610, 1796
BstBAI	YACGTR	2 cut(s)	1313, 1586
BstC8I	GCNNGC	2 cut(s)	662, 1422
BstDEI	CTNAG	6 cut(s)	811, 945, 989, 998, 1172, 1702
BstDSI	CCRYGG	1 cut(s)	1361
BstF5I	GGATG	7 cut(s)	540, 988, 1272, 1696, 1792, 1843, 1967
BstFNI	CGCG	2 cut(s)	30, 1467
BstKTI	GATC	8 cut(s)	387, 583, 1222, 1306, 1432, 1488, 1627, 1674
BstMAI	GTCTC	3 cut(s)	75, 255, 1775
BstMBI	GATC	8 cut(s)	384, 580, 1219, 1303, 1429, 1485, 1624, 1671
BstNI	CCWGG	3 cut(s)	67, 1144, 1812
BstNSI	RCATGY	1 cut(s)	911
BstSCI	CCNGG	4 cut(s)	65, 374, 1142, 1810
BstSFI	CTRYAG	1 cut(s)	1758
BstSLI	GKGCMC	2 cut(s)	306, 417
BstUI	CGCG	2 cut(s)	30, 1467
BstV1I	GCAGC	3 cut(s)	1281, 1639, 1786
BstV2I	GAAGAC	3 cut(s)	624, 1134, 1753
BstX2I	RGATCY	5 cut(s)	384, 580, 1219, 1303, 1624
BstXI	CCANNNNNNTGG	1 cut(s)	871
BstYI	RGATCY	5 cut(s)	384, 580, 1219, 1303, 1624
Bsu15I	ATCGAT	1 cut(s)	647
BsuI	GTATCC	1 cut(s)	86
BsuRI	GGCC	4 cut(s)	213, 304, 335, 1869
BsuTUI	ATCGAT	1 cut(s)	647
BtgI	CCRYGG	1 cut(s)	1361
BtsCI	GGATG	7 cut(s)	540, 988, 1272, 1696, 1792, 1843, 1967
BtsIMutI	CAGTG	4 cut(s)	619, 621, 811, 1448
Cac8I	GCNNGC	2 cut(s)	662, 1422
CaiI	CAGNNNCTG	1 cut(s)	1709
Cfr13I	GGNCC	7 cut(s)	175, 211, 302, 303, 333, 1685, 1867
ClaI	ATCGAT	1 cut(s)	647
CseI	GACGC	1 cut(s)	221
CsiI	ACCWGGT	1 cut(s)	65
Csp6I	GTAC	3 cut(s)	438, 762, 1461
CviAII	CATG	7 cut(s)	190, 686, 871, 908, 1063, 1362, 1884
CviQI	GTAC	3 cut(s)	438, 762, 1461
DdeI	CTNAG	6 cut(s)	811, 945, 989, 998, 1172, 1702
DpnI	GATC	8 cut(s)	386, 582, 1221, 1305, 1431, 1487, 1626, 1673
DpnII	GATC	8 cut(s)	384, 580, 1219, 1303, 1429, 1485, 1624, 1671
DraI	TTTAAA	2 cut(s)	1087, 1891
DriI	GACNNNNNGTC	1 cut(s)	1691
Eam1105I	GACNNNNNGTC	1 cut(s)	1691
EciI	GGCGGA	1 cut(s)	341
Eco130I	CCWWGG	3 cut(s)	679, 1332, 1361
Eco24I	GRGCYC	1 cut(s)	306
Eco31I	GGTCTC	1 cut(s)	75
Eco32I	GATATC	3 cut(s)	1439, 1594, 1740
Eco47I	GGWCC	2 cut(s)	175, 1685
Eco57I	CTGAAG	2 cut(s)	292, 1364
Eco72I	CACGTG	2 cut(s)	1313, 1586
Eco88I	CYCGRG	3 cut(s)	165, 380, 1008
EcoO109I	RGGNCCY	2 cut(s)	175, 303
EcoRII	CCWGG	3 cut(s)	65, 1142, 1810
EcoRV	GATATC	3 cut(s)	1439, 1594, 1740
EcoT14I	CCWWGG	3 cut(s)	679, 1332, 1361
EcoT38I	GRGCYC	1 cut(s)	306
ErhI	CCWWGG	3 cut(s)	679, 1332, 1361
FaeI	CATG	7 cut(s)	193, 689, 874, 911, 1066, 1365, 1887
FatI	CATG	7 cut(s)	189, 685, 870, 907, 1062, 1361, 1883
FauNDI	CATATG	2 cut(s)	825, 1933
Fnu4HI	GCNGC	8 cut(s)	5, 22, 510, 674, 1295, 1650, 1653, 1800
FokI	GGATG	7 cut(s)	527, 995, 1259, 1703, 1799, 1850, 1954
FriOI	GRGCYC	1 cut(s)	306
Fsp4HI	GCNGC	8 cut(s)	5, 22, 510, 674, 1295, 1650, 1653, 1800
FspBI	CTAG	6 cut(s)	18, 45, 368, 1136, 1307, 1580
GluI	GCNGC	8 cut(s)	5, 22, 510, 674, 1295, 1650, 1653, 1800
GsaI	CCCAGC	1 cut(s)	1056
GsuI	CTGGAG	1 cut(s)	498
HaeIII	GGCC	4 cut(s)	213, 304, 335, 1869
HapII	CCGG	2 cut(s)	376, 1688
HgaI	GACGC	1 cut(s)	221
Hin1II	CATG	7 cut(s)	193, 689, 874, 911, 1066, 1365, 1887
HincII	GTYRAC	1 cut(s)	346
HindII	GTYRAC	1 cut(s)	346
HinfI	GANTC	6 cut(s)	820, 1021, 1139, 1203, 1716, 1732
HpaII	CCGG	2 cut(s)	376, 1688
HphI	GGTGA	4 cut(s)	785, 1129, 1631, 1741
Hpy166II	GTNNAC	2 cut(s)	346, 415
Hpy188I	TCNGA	9 cut(s)	357, 606, 1018, 1082, 1175, 1215, 1663, 1737, 1850
Hpy188III	TCNNGA	6 cut(s)	103, 310, 382, 521, 937, 1743
Hpy8I	GTNNAC	2 cut(s)	346, 415
Hpy99I	CGWCG	1 cut(s)	237
HpyAV	CCTTC	5 cut(s)	258, 316, 1476, 1516, 1814
HpyCH4III	ACNGT	4 cut(s)	614, 806, 1759, 1992
HpyCH4IV	ACGT	2 cut(s)	1312, 1585
HpyF3I	CTNAG	6 cut(s)	811, 945, 989, 998, 1172, 1702
HpySE526I	ACGT	2 cut(s)	1312, 1585
Hsp92II	CATG	7 cut(s)	193, 689, 874, 911, 1066, 1365, 1887
KpnI	GGTACC	1 cut(s)	441
Kzo9I	GATC	8 cut(s)	384, 580, 1219, 1303, 1429, 1485, 1624, 1671
LmnI	GCTCC	8 cut(s)	82, 420, 470, 562, 962, 1511, 1663, 1911
Lsp1109I	GCAGC	3 cut(s)	1281, 1639, 1786
LweI	GCATC	6 cut(s)	397, 472, 549, 884, 1144, 1777
MabI	ACCWGGT	1 cut(s)	65
MaeI	CTAG	6 cut(s)	18, 45, 368, 1136, 1307, 1580
MaeII	ACGT	2 cut(s)	1312, 1585
MaeIII	GTNAC	3 cut(s)	608, 773, 806
MalI	GATC	8 cut(s)	386, 582, 1221, 1305, 1431, 1487, 1626, 1673
MboI	GATC	8 cut(s)	384, 580, 1219, 1303, 1429, 1485, 1624, 1671
MflI	RGATCY	5 cut(s)	384, 580, 1219, 1303, 1624
MhlI	GDGCHC	2 cut(s)	306, 417
MluCI	AATT	4 cut(s)	127, 627, 1830, 1858
MlyI	GAGTC	2 cut(s)	1030, 1148
MmeI	TCCRAC	3 cut(s)	730, 1510, 1900
MroXI	GAANNNNTTC	1 cut(s)	1320
MseI	TTAA	7 cut(s)	957, 1047, 1086, 1518, 1680, 1754, 1890
MslI	CAYNNNNRTG	2 cut(s)	1067, 1425
MspA1I	CMGCKG	2 cut(s)	288, 888
MspI	CCGG	2 cut(s)	376, 1688
MspR9I	CCNGG	4 cut(s)	67, 376, 1144, 1812
Mva1269I	GAATGC	1 cut(s)	319
MvaI	CCWGG	3 cut(s)	67, 1144, 1812
MvnI	CGCG	2 cut(s)	30, 1467
NciI	CCSGG	1 cut(s)	376
NcoI	CCATGG	1 cut(s)	1361
NdeI	CATATG	2 cut(s)	825, 1933
NdeII	GATC	8 cut(s)	384, 580, 1219, 1303, 1429, 1485, 1624, 1671
NlaIII	CATG	7 cut(s)	193, 689, 874, 911, 1066, 1365, 1887
NlaIV	GGNNCC	6 cut(s)	304, 386, 439, 831, 1074, 1359
NmeAIII	GCCGAG	2 cut(s)	361, 1660
NmuCI	GTSAC	2 cut(s)	773, 806
NspI	RCATGY	1 cut(s)	911
PaeR7I	CTCGAG	1 cut(s)	1008
PctI	GAATGC	1 cut(s)	319
PdmI	GAANNNNTTC	1 cut(s)	1320
PfeI	GAWTC	4 cut(s)	820, 1203, 1716, 1732
PfoI	TCCNGGA	1 cut(s)	1142
PkrI	GCNGC	8 cut(s)	6, 23, 511, 675, 1296, 1651, 1654, 1801
PleI	GAGTC	2 cut(s)	1029, 1147
PmaCI	CACGTG	2 cut(s)	1313, 1586
PmlI	CACGTG	2 cut(s)	1313, 1586
PpsI	GAGTC	2 cut(s)	1029, 1147
Ppu21I	YACGTR	2 cut(s)	1313, 1586
PpuMI	RGGWCCY	1 cut(s)	175
PshBI	ATTAAT	1 cut(s)	1047
PsiI	TTATAA	1 cut(s)	1857
Psp5II	RGGWCCY	1 cut(s)	175
Psp6I	CCWGG	3 cut(s)	65, 1142, 1810
PspCI	CACGTG	2 cut(s)	1313, 1586
PspFI	CCCAGC	1 cut(s)	1052
PspGI	CCWGG	3 cut(s)	65, 1142, 1810
PspN4I	GGNNCC	6 cut(s)	304, 386, 439, 831, 1074, 1359
PspOMI	GGGCCC	1 cut(s)	302
PspPI	GGNCC	7 cut(s)	175, 211, 302, 303, 333, 1685, 1867
PspPPI	RGGWCCY	1 cut(s)	175
PspXI	VCTCGAGB	1 cut(s)	1008
PstNI	CAGNNNCTG	1 cut(s)	1709
PsuI	RGATCY	5 cut(s)	384, 580, 1219, 1303, 1624
PvuII	CAGCTG	2 cut(s)	288, 888
RsaI	GTAC	3 cut(s)	439, 763, 1462
RsaNI	GTAC	3 cut(s)	438, 762, 1461
RseI	CAYNNNNRTG	2 cut(s)	1067, 1425
SaqAI	TTAA	7 cut(s)	957, 1047, 1086, 1518, 1680, 1754, 1890
SatI	GCNGC	8 cut(s)	5, 22, 510, 674, 1295, 1650, 1653, 1800
Sau3AI	GATC	8 cut(s)	384, 580, 1219, 1303, 1429, 1485, 1624, 1671
Sau96I	GGNCC	7 cut(s)	175, 211, 302, 303, 333, 1685, 1867
SchI	GAGTC	2 cut(s)	1030, 1148
ScrFI	CCNGG	4 cut(s)	67, 376, 1144, 1812
SduI	GDGCHC	2 cut(s)	306, 417
SexAI	ACCWGGT	1 cut(s)	65
SfaNI	GCATC	6 cut(s)	397, 472, 549, 884, 1144, 1777
SfcI	CTRYAG	1 cut(s)	1758
Sfr274I	CTCGAG	1 cut(s)	1008
SinI	GGWCC	2 cut(s)	175, 1685
SlaI	CTCGAG	1 cut(s)	1008
SmiMI	CAYNNNNRTG	2 cut(s)	1067, 1425
SmlI	CTYRAG	3 cut(s)	101, 852, 1008
SmoI	CTYRAG	3 cut(s)	101, 852, 1008
Sse9I	AATT	4 cut(s)	127, 627, 1830, 1858
SspI	AATATT	1 cut(s)	460
SspMI	CTAG	6 cut(s)	18, 45, 368, 1136, 1307, 1580
StyD4I	CCNGG	4 cut(s)	65, 374, 1142, 1810
StyI	CCWWGG	3 cut(s)	679, 1332, 1361
TaaI	ACNGT	4 cut(s)	614, 806, 1759, 1992
TaiI	ACGT	2 cut(s)	1315, 1588
TaqI	TCGA	3 cut(s)	647, 1009, 1913
TasI	AATT	4 cut(s)	127, 627, 1830, 1858
TauI	GCSGC	4 cut(s)	24, 512, 676, 1652
TfiI	GAWTC	4 cut(s)	820, 1203, 1716, 1732
Tru1I	TTAA	7 cut(s)	957, 1047, 1086, 1518, 1680, 1754, 1890
Tru9I	TTAA	7 cut(s)	957, 1047, 1086, 1518, 1680, 1754, 1890
TscAI	CASTG	4 cut(s)	619, 628, 811, 1448
TseFI	GTSAC	2 cut(s)	773, 806
TseI	GCWGC	4 cut(s)	4, 1294, 1652, 1799
Tsp45I	GTSAC	2 cut(s)	773, 806
TspDTI	ATGAA	4 cut(s)	165, 702, 812, 1140
TspGWI	ACGGA	2 cut(s)	1368, 1586
TspRI	CASTG	4 cut(s)	619, 628, 811, 1448
VneI	GTGCAC	1 cut(s)	413
VpaK11BI	GGWCC	2 cut(s)	175, 1685
VspI	ATTAAT	1 cut(s)	1047
XceI	RCATGY	1 cut(s)	911
XhoI	CTCGAG	1 cut(s)	1008
XmnI	GAANNNNTTC	1 cut(s)	1320
XspI	CTAG	6 cut(s)	18, 45, 368, 1136, 1307, 1580

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.