Belongs to the glycosyl hydrolase 3 family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 19 - 202 | 1.8e-53 | TIR domain |
| TIR_2 | PF13676 | 22 - 120 | 4.4e-16 | TIR domain |
| NB-ARC | PF00931 | 216 - 371 | 1.6e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 440 - 510 | 4.3e-10 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 669 - 793 | 5.2e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 836 - 926 | 1e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| C-JID | PF20160 | 994 - 1143 | 2.6e-08 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 504 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1472 |
| Acc16I | TGCGCA | 1 cut(s) | 1694 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2156 |
| AccI | GTMKAC | 1 cut(s) | 3263 |
| AccII | CGCG | 1 cut(s) | 3299 |
| AccIII | TCCGGA | 3 cut(s) | 196, 768, 3049 |
| AciI | CCGC | 4 cut(s) | 94, 1057, 2399, 2492 |
| AclWI | GGATC | 6 cut(s) | 347, 360, 2721, 2921, 3060, 3104 |
| AcoI | YGGCCR | 3 cut(s) | 471, 1817, 2901 |
| AcuI | CTGAAG | 4 cut(s) | 411, 1859, 2333, 2651 |
| AdeI | CACNNNGTG | 1 cut(s) | 273 |
| AfaI | GTAC | 4 cut(s) | 134, 857, 2296, 3416 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 436, 711, 1124, 1870, 2156, 2296, 2910 |
| AflII | CTTAAG | 1 cut(s) | 2354 |
| AflIII | ACRYGT | 2 cut(s) | 541, 3297 |
| AhlI | ACTAGT | 1 cut(s) | 787 |
| AjnI | CCWGG | 2 cut(s) | 1540, 2980 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1223, 1255, 2223, 2255, 2798, 2830 |
| AleI | CACNNNNGTG | 2 cut(s) | 1530, 2946 |
| Alw21I | GWGCWC | 4 cut(s) | 14, 204, 1086, 2953 |
| Alw26I | GTCTC | 6 cut(s) | 112, 1019, 1931, 2282, 2291, 2322 |
| AlwI | GGATC | 6 cut(s) | 347, 360, 2721, 2921, 3060, 3104 |
| Ama87I | CYCGRG | 4 cut(s) | 2108, 2290, 2921, 3122 |
| Aor13HI | TCCGGA | 3 cut(s) | 196, 768, 3049 |
| AoxI | GGCC | 6 cut(s) | 471, 1738, 1817, 2242, 2442, 2901 |
| ApeKI | GCWGC | 5 cut(s) | 381, 1551, 1832, 2788, 3273 |
| AseI | ATTAAT | 1 cut(s) | 2676 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2881 |
| AspLEI | GCGC | 1 cut(s) | 1695 |
| AspS9I | GGNCC | 4 cut(s) | 782, 1739, 2008, 2199 |
| AsuC2I | CCSGG | 2 cut(s) | 2291, 2292 |
| AsuHPI | GGTGA | 5 cut(s) | 95, 240, 986, 1012, 2794 |
| AsuII | TTCGAA | 1 cut(s) | 1104 |
| AvaI | CYCGRG | 4 cut(s) | 2108, 2290, 2921, 3122 |
| AvaII | GGWCC | 3 cut(s) | 782, 2008, 2199 |
| AxyI | CCTNAGG | 1 cut(s) | 645 |
| BaeGI | GKGCMC | 1 cut(s) | 2798 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 116, 149, 2286, 2319 |
| BalI | TGGCCA | 2 cut(s) | 473, 2903 |
| BamHI | GGATCC | 1 cut(s) | 352 |
| BanII | GRGCYC | 4 cut(s) | 204, 1086, 1173, 3406 |
| BauI | CACGAG | 2 cut(s) | 24, 1530 |
| BbsI | GAAGAC | 4 cut(s) | 93, 1538, 1885, 2627 |
| Bbv12I | GWGCWC | 4 cut(s) | 14, 204, 1086, 2953 |
| BbvI | GCAGC | 5 cut(s) | 393, 1563, 1819, 2800, 3260 |
| BceAI | ACGGC | 3 cut(s) | 1539, 2313, 3367 |
| BciT130I | CCWGG | 2 cut(s) | 1542, 2982 |
| BciVI | GTATCC | 2 cut(s) | 1797, 3167 |
| BcnI | CCSGG | 2 cut(s) | 2291, 2292 |
| BcoDI | GTCTC | 6 cut(s) | 112, 1019, 1931, 2282, 2291, 2322 |
| BcuI | ACTAGT | 1 cut(s) | 787 |
| BfmI | CTRYAG | 1 cut(s) | 128 |
| BfrI | CTTAAG | 1 cut(s) | 2354 |
| BfuI | GTATCC | 2 cut(s) | 1797, 3167 |
| BglII | AGATCT | 1 cut(s) | 1909 |
| BisI | GCNGC | 6 cut(s) | 382, 1552, 1833, 2492, 2789, 3274 |
| BlpI | GCTNAGC | 2 cut(s) | 402, 3039 |
| BlsI | GCNGC | 6 cut(s) | 383, 1553, 1834, 2493, 2790, 3275 |
| Bme1390I | CCNGG | 4 cut(s) | 1542, 2291, 2292, 2982 |
| Bme18I | GGWCC | 3 cut(s) | 782, 2008, 2199 |
| BmeT110I | CYCGRG | 4 cut(s) | 2108, 2290, 2921, 3122 |
| BmgT120I | GGNCC | 4 cut(s) | 782, 1739, 2008, 2199 |
| BmiI | GGNNCC | 7 cut(s) | 354, 865, 1172, 1539, 1741, 2200, 3048 |
| BmrFI | CCNGG | 4 cut(s) | 1542, 2291, 2292, 2982 |
| BmrI | ACTGGG | 1 cut(s) | 812 |
| BmsI | GCATC | 6 cut(s) | 1291, 1470, 1680, 1833, 2333, 2719 |
| BmuI | ACTGGG | 1 cut(s) | 812 |
| BpiI | GAAGAC | 4 cut(s) | 93, 1538, 1885, 2627 |
| BpmI | CTGGAG | 1 cut(s) | 2264 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2891 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 402, 3039 |
| Bpu14I | TTCGAA | 1 cut(s) | 1104 |
| BpuEI | CTTGAG | 6 cut(s) | 91, 226, 1100, 1783, 1988, 2207 |
| BpuMI | CCSGG | 2 cut(s) | 2291, 2292 |
| BsaI | GGTCTC | 1 cut(s) | 1931 |
| BsaJI | CCNNGG | 5 cut(s) | 306, 2290, 2501, 3203, 3310 |
| BsaWI | WCCGGW | 5 cut(s) | 196, 314, 768, 2710, 3049 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2372, 2402, 2700, 2730 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 436, 711, 1124, 1870, 2156, 2296, 2910 |
| Bse118I | RCCGGY | 2 cut(s) | 135, 334 |
| Bse1I | ACTGG | 2 cut(s) | 818, 3005 |
| Bse21I | CCTNAGG | 1 cut(s) | 645 |
| Bse3DI | GCAATG | 2 cut(s) | 1338, 2019 |
| BseAI | TCCGGA | 3 cut(s) | 196, 768, 3049 |
| BseBI | CCWGG | 2 cut(s) | 1542, 2982 |
| BseDI | CCNNGG | 5 cut(s) | 306, 2290, 2501, 3203, 3310 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 436, 711, 1124, 1870, 2156, 2296, 2910 |
| BseMI | GCAATG | 2 cut(s) | 1338, 2019 |
| BseMII | CTCAG | 8 cut(s) | 631, 636, 744, 2131, 2199, 2675, 2921, 3053 |
| BseNI | ACTGG | 2 cut(s) | 818, 3005 |
| BseRI | GAGGAG | 6 cut(s) | 662, 1007, 1550, 2943, 2946, 3428 |
| BseSI | GKGCMC | 1 cut(s) | 2798 |
| BseXI | GCAGC | 5 cut(s) | 393, 1563, 1819, 2800, 3260 |
| BsgI | GTGCAG | 1 cut(s) | 1818 |
| Bsh1236I | CGCG | 1 cut(s) | 3299 |
| Bsh1285I | CGRYCG | 1 cut(s) | 166 |
| BshFI | GGCC | 6 cut(s) | 473, 1740, 1819, 2244, 2444, 2903 |
| BsiEI | CGRYCG | 1 cut(s) | 166 |
| BsiHKAI | GWGCWC | 4 cut(s) | 14, 204, 1086, 2953 |
| BsiHKCI | CYCGRG | 4 cut(s) | 2108, 2290, 2921, 3122 |
| BslFI | GGGAC | 1 cut(s) | 2212 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 436, 711, 1124, 1870, 2156, 2296, 2910 |
| BsmAI | GTCTC | 6 cut(s) | 112, 1019, 1931, 2282, 2291, 2322 |
| BsmBI | CGTCTC | 1 cut(s) | 1019 |
| BsmFI | GGGAC | 1 cut(s) | 2212 |
| BsmI | GAATGC | 2 cut(s) | 1343, 1682 |
| BsnI | GGCC | 6 cut(s) | 473, 1740, 1819, 2244, 2444, 2903 |
| Bso31I | GGTCTC | 1 cut(s) | 1931 |
| BsoBI | CYCGRG | 4 cut(s) | 2108, 2290, 2921, 3122 |
| Bsp119I | TTCGAA | 1 cut(s) | 1104 |
| Bsp1286I | GDGCHC | 7 cut(s) | 14, 204, 1086, 1173, 2798, 2953, 3406 |
| Bsp13I | TCCGGA | 3 cut(s) | 196, 768, 3049 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 402, 3039 |
| Bsp19I | CCATGG | 1 cut(s) | 306 |
| BspACI | CCGC | 4 cut(s) | 94, 1057, 2399, 2492 |
| BspANI | GGCC | 6 cut(s) | 473, 1740, 1819, 2244, 2444, 2903 |
| BspCNI | CTCAG | 8 cut(s) | 630, 637, 745, 2130, 2200, 2674, 2920, 3052 |
| BspEI | TCCGGA | 3 cut(s) | 196, 768, 3049 |
| BspFNI | CGCG | 1 cut(s) | 3299 |
| BspLI | GGNNCC | 7 cut(s) | 354, 865, 1172, 1539, 1741, 2200, 3048 |
| BspMAI | CTGCAG | 1 cut(s) | 132 |
| BspPI | GGATC | 6 cut(s) | 347, 360, 2721, 2921, 3060, 3104 |
| BspT104I | TTCGAA | 1 cut(s) | 1104 |
| BspTI | CTTAAG | 1 cut(s) | 2354 |
| BspTNI | GGTCTC | 1 cut(s) | 1931 |
| BsrDI | GCAATG | 2 cut(s) | 1338, 2019 |
| BsrFI | RCCGGY | 2 cut(s) | 135, 334 |
| BsrI | ACTGG | 2 cut(s) | 818, 3005 |
| BssAI | RCCGGY | 2 cut(s) | 135, 334 |
| BssECI | CCNNGG | 5 cut(s) | 306, 2290, 2501, 3203, 3310 |
| BssNAI | GTATAC | 1 cut(s) | 3264 |
| BssSI | CACGAG | 2 cut(s) | 24, 1530 |
| BssT1I | CCWWGG | 3 cut(s) | 306, 2501, 3203 |
| Bst1107I | GTATAC | 1 cut(s) | 3264 |
| Bst2BI | CACGAG | 2 cut(s) | 24, 1530 |
| Bst2UI | CCWGG | 2 cut(s) | 1542, 2982 |
| Bst4CI | ACNGT | 7 cut(s) | 122, 1629, 1997, 2046, 2514, 2833, 3149 |
| Bst6I | CTCTTC | 5 cut(s) | 1644, 1806, 2325, 2678, 3386 |
| BstAFI | CTTAAG | 1 cut(s) | 2354 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2652 |
| BstBI | TTCGAA | 1 cut(s) | 1104 |
| BstC8I | GCNNGC | 7 cut(s) | 1830, 1983, 2403, 2489, 2644, 3045, 3159 |
| BstDSI | CCRYGG | 1 cut(s) | 306 |
| BstFNI | CGCG | 1 cut(s) | 3299 |
| BstHHI | GCGC | 1 cut(s) | 1695 |
| BstMAI | GTCTC | 6 cut(s) | 112, 1019, 1931, 2282, 2291, 2322 |
| BstMCI | CGRYCG | 1 cut(s) | 166 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 41, 136, 1825, 2407, 2652, 3044 |
| BstNI | CCWGG | 2 cut(s) | 1542, 2982 |
| BstSCI | CCNGG | 4 cut(s) | 1540, 2289, 2290, 2980 |
| BstSFI | CTRYAG | 1 cut(s) | 128 |
| BstSLI | GKGCMC | 1 cut(s) | 2798 |
| BstUI | CGCG | 1 cut(s) | 3299 |
| BstV1I | GCAGC | 5 cut(s) | 393, 1563, 1819, 2800, 3260 |
| BstV2I | GAAGAC | 4 cut(s) | 93, 1538, 1885, 2627 |
| BstX2I | RGATCY | 5 cut(s) | 352, 1909, 2713, 2913, 3109 |
| BstYI | RGATCY | 5 cut(s) | 352, 1909, 2713, 2913, 3109 |
| BstZ17I | GTATAC | 1 cut(s) | 3264 |
| Bsu36I | CCTNAGG | 1 cut(s) | 645 |
| BsuI | GTATCC | 2 cut(s) | 1797, 3167 |
| BsuRI | GGCC | 6 cut(s) | 473, 1740, 1819, 2244, 2444, 2903 |
| BtgI | CCRYGG | 1 cut(s) | 306 |
| BtgZI | GCGATG | 2 cut(s) | 2769, 3138 |
| BtsIMutI | CAGTG | 2 cut(s) | 427, 1835 |
| Cac8I | GCNNGC | 7 cut(s) | 1830, 1983, 2403, 2489, 2644, 3045, 3159 |
| CfoI | GCGC | 1 cut(s) | 1695 |
| Cfr10I | RCCGGY | 2 cut(s) | 135, 334 |
| Cfr13I | GGNCC | 4 cut(s) | 782, 1739, 2008, 2199 |
| Cfr9I | CCCGGG | 1 cut(s) | 2290 |
| CseI | GACGC | 2 cut(s) | 1016, 3305 |
| Csp6I | GTAC | 4 cut(s) | 133, 856, 2295, 3415 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2320, 2355 |
| CviAII | CATG | 9 cut(s) | 97, 307, 407, 779, 1484, 1506, 3248, 3336, 3375 |
| CviQI | GTAC | 4 cut(s) | 133, 856, 2295, 3415 |
| DraI | TTTAAA | 2 cut(s) | 2308, 2461 |
| DraIII | CACNNNGTG | 1 cut(s) | 273 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1472 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1472 |
| EaeI | YGGCCR | 3 cut(s) | 471, 1817, 2901 |
| Eam1104I | CTCTTC | 5 cut(s) | 1644, 1806, 2325, 2678, 3386 |
| EarI | CTCTTC | 5 cut(s) | 1644, 1806, 2325, 2678, 3386 |
| Ecl136II | GAGCTC | 2 cut(s) | 202, 1084 |
| Eco130I | CCWWGG | 3 cut(s) | 306, 2501, 3203 |
| Eco24I | GRGCYC | 4 cut(s) | 204, 1086, 1173, 3406 |
| Eco31I | GGTCTC | 1 cut(s) | 1931 |
| Eco32I | GATATC | 1 cut(s) | 2193 |
| Eco47I | GGWCC | 3 cut(s) | 782, 2008, 2199 |
| Eco53kI | GAGCTC | 2 cut(s) | 202, 1084 |
| Eco57I | CTGAAG | 4 cut(s) | 411, 1859, 2333, 2651 |
| Eco81I | CCTNAGG | 1 cut(s) | 645 |
| Eco88I | CYCGRG | 4 cut(s) | 2108, 2290, 2921, 3122 |
| EcoICRI | GAGCTC | 2 cut(s) | 202, 1084 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1739, 2199 |
| EcoRI | GAATTC | 3 cut(s) | 327, 1257, 1767 |
| EcoRII | CCWGG | 2 cut(s) | 1540, 2980 |
| EcoRV | GATATC | 1 cut(s) | 2193 |
| EcoT14I | CCWWGG | 3 cut(s) | 306, 2501, 3203 |
| EcoT22I | ATGCAT | 2 cut(s) | 1485, 2734 |
| EcoT38I | GRGCYC | 4 cut(s) | 204, 1086, 1173, 3406 |
| ErhI | CCWWGG | 3 cut(s) | 306, 2501, 3203 |
| Esp3I | CGTCTC | 1 cut(s) | 1019 |
| FaeI | CATG | 9 cut(s) | 100, 310, 410, 782, 1487, 1509, 3251, 3339, 3378 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1562, 1594 |
| FaqI | GGGAC | 1 cut(s) | 2212 |
| FatI | CATG | 9 cut(s) | 96, 306, 406, 778, 1483, 1505, 3247, 3335, 3374 |
| FauI | CCCGC | 1 cut(s) | 101 |
| FauNDI | CATATG | 2 cut(s) | 1775, 3210 |
| FblI | GTMKAC | 1 cut(s) | 3263 |
| Fnu4HI | GCNGC | 6 cut(s) | 382, 1552, 1833, 2492, 2789, 3274 |
| FriOI | GRGCYC | 4 cut(s) | 204, 1086, 1173, 3406 |
| Fsp4HI | GCNGC | 6 cut(s) | 382, 1552, 1833, 2492, 2789, 3274 |
| FspI | TGCGCA | 1 cut(s) | 1694 |
| GlaI | GCGC | 1 cut(s) | 1694 |
| GluI | GCNGC | 6 cut(s) | 382, 1552, 1833, 2492, 2789, 3274 |
| GsuI | CTGGAG | 1 cut(s) | 2264 |
| HaeIII | GGCC | 6 cut(s) | 473, 1740, 1819, 2244, 2444, 2903 |
| HgaI | GACGC | 2 cut(s) | 1016, 3305 |
| HhaI | GCGC | 1 cut(s) | 1695 |
| Hin1II | CATG | 9 cut(s) | 100, 310, 410, 782, 1487, 1509, 3251, 3339, 3378 |
| Hin6I | GCGC | 1 cut(s) | 1693 |
| HinP1I | GCGC | 1 cut(s) | 1693 |
| HincII | GTYRAC | 2 cut(s) | 1523, 2049 |
| HindII | GTYRAC | 2 cut(s) | 1523, 2049 |
| HindIII | AAGCTT | 3 cut(s) | 2036, 2351, 2435 |
| HphI | GGTGA | 5 cut(s) | 95, 240, 986, 1012, 2794 |
| Hpy166II | GTNNAC | 7 cut(s) | 125, 785, 1523, 1637, 2029, 2049, 3264 |
| Hpy8I | GTNNAC | 7 cut(s) | 125, 785, 1523, 1637, 2029, 2049, 3264 |
| Hpy99I | CGWCG | 5 cut(s) | 365, 1032, 2415, 2573, 3299 |
| HpyCH4III | ACNGT | 7 cut(s) | 122, 1629, 1997, 2046, 2514, 2833, 3149 |
| HpyCH4IV | ACGT | 4 cut(s) | 363, 541, 1012, 2413 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 41, 136, 1825, 2407, 2652, 3044 |
| HpySE526I | ACGT | 4 cut(s) | 363, 541, 1012, 2413 |
| Hsp92II | CATG | 9 cut(s) | 100, 310, 410, 782, 1487, 1509, 3251, 3339, 3378 |
| HspAI | GCGC | 1 cut(s) | 1693 |
| Kpn2I | TCCGGA | 3 cut(s) | 196, 768, 3049 |
| LmnI | GCTCC | 9 cut(s) | 49, 182, 199, 378, 646, 1176, 1537, 2956, 3052 |
| Lsp1109I | GCAGC | 5 cut(s) | 393, 1563, 1819, 2800, 3260 |
| LweI | GCATC | 6 cut(s) | 1291, 1470, 1680, 1833, 2333, 2719 |
| MaeII | ACGT | 4 cut(s) | 363, 541, 1012, 2413 |
| MaeIII | GTNAC | 7 cut(s) | 932, 994, 1091, 1245, 1991, 2961, 3115 |
| MfeI | CAATTG | 4 cut(s) | 2226, 2836, 3134, 3141 |
| MflI | RGATCY | 5 cut(s) | 352, 1909, 2713, 2913, 3109 |
| MhlI | GDGCHC | 7 cut(s) | 14, 204, 1086, 1173, 2798, 2953, 3406 |
| MlsI | TGGCCA | 2 cut(s) | 473, 2903 |
| MluI | ACGCGT | 1 cut(s) | 3297 |
| MluNI | TGGCCA | 2 cut(s) | 473, 2903 |
| MlyI | GAGTC | 8 cut(s) | 311, 1253, 1928, 2293, 2322, 2479, 2927, 3134 |
| MmeI | TCCRAC | 5 cut(s) | 32, 384, 580, 1292, 2593 |
| Mox20I | TGGCCA | 2 cut(s) | 473, 2903 |
| Mph1103I | ATGCAT | 2 cut(s) | 1485, 2734 |
| MroI | TCCGGA | 3 cut(s) | 196, 768, 3049 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2881 |
| MscI | TGGCCA | 2 cut(s) | 473, 2903 |
| MslI | CAYNNNNRTG | 3 cut(s) | 95, 1530, 2946 |
| Msp20I | TGGCCA | 2 cut(s) | 473, 2903 |
| MspA1I | CMGCKG | 1 cut(s) | 3043 |
| MspCI | CTTAAG | 1 cut(s) | 2354 |
| MspR9I | CCNGG | 4 cut(s) | 1542, 2291, 2292, 2982 |
| MunI | CAATTG | 4 cut(s) | 2226, 2836, 3134, 3141 |
| Mva1269I | GAATGC | 2 cut(s) | 1343, 1682 |
| MvaI | CCWGG | 2 cut(s) | 1542, 2982 |
| MvnI | CGCG | 1 cut(s) | 3299 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 41, 136, 1825, 2407, 2652, 3044 |
| NciI | CCSGG | 2 cut(s) | 2291, 2292 |
| NcoI | CCATGG | 1 cut(s) | 306 |
| NdeI | CATATG | 2 cut(s) | 1775, 3210 |
| NlaIII | CATG | 9 cut(s) | 100, 310, 410, 782, 1487, 1509, 3251, 3339, 3378 |
| NlaIV | GGNNCC | 7 cut(s) | 354, 865, 1172, 1539, 1741, 2200, 3048 |
| NmuCI | GTSAC | 6 cut(s) | 932, 1091, 1245, 1991, 2961, 3115 |
| NsbI | TGCGCA | 1 cut(s) | 1694 |
| NsiI | ATGCAT | 2 cut(s) | 1485, 2734 |
| NspV | TTCGAA | 1 cut(s) | 1104 |
| OliI | CACNNNNGTG | 2 cut(s) | 1530, 2946 |
| PaeR7I | CTCGAG | 2 cut(s) | 2108, 3122 |
| PctI | GAATGC | 2 cut(s) | 1343, 1682 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2881 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2156 |
| PfoI | TCCNGGA | 1 cut(s) | 2980 |
| PkrI | GCNGC | 6 cut(s) | 383, 1553, 1834, 2493, 2790, 3275 |
| PleI | GAGTC | 8 cut(s) | 310, 1252, 1927, 2292, 2322, 2478, 2927, 3133 |
| PpsI | GAGTC | 8 cut(s) | 310, 1252, 1927, 2292, 2322, 2478, 2927, 3133 |
| PpuMI | RGGWCCY | 1 cut(s) | 2199 |
| PshBI | ATTAAT | 1 cut(s) | 2676 |
| PsiI | TTATAA | 1 cut(s) | 504 |
| Psp124BI | GAGCTC | 2 cut(s) | 204, 1086 |
| Psp5II | RGGWCCY | 1 cut(s) | 2199 |
| Psp6I | CCWGG | 2 cut(s) | 1540, 2980 |
| PspGI | CCWGG | 2 cut(s) | 1540, 2980 |
| PspN4I | GGNNCC | 7 cut(s) | 354, 865, 1172, 1539, 1741, 2200, 3048 |
| PspPI | GGNCC | 4 cut(s) | 782, 1739, 2008, 2199 |
| PspPPI | RGGWCCY | 1 cut(s) | 2199 |
| PstI | CTGCAG | 1 cut(s) | 132 |
| PsuI | RGATCY | 5 cut(s) | 352, 1909, 2713, 2913, 3109 |
| PvuII | CAGCTG | 1 cut(s) | 3043 |
| RsaI | GTAC | 4 cut(s) | 134, 857, 2296, 3416 |
| RsaNI | GTAC | 4 cut(s) | 133, 856, 2295, 3415 |
| RseI | CAYNNNNRTG | 3 cut(s) | 95, 1530, 2946 |
| SacI | GAGCTC | 2 cut(s) | 204, 1086 |
| SatI | GCNGC | 6 cut(s) | 382, 1552, 1833, 2492, 2789, 3274 |
| Sau96I | GGNCC | 4 cut(s) | 782, 1739, 2008, 2199 |
| SchI | GAGTC | 8 cut(s) | 311, 1253, 1928, 2293, 2322, 2479, 2927, 3134 |
| ScrFI | CCNGG | 4 cut(s) | 1542, 2291, 2292, 2982 |
| SduI | GDGCHC | 7 cut(s) | 14, 204, 1086, 1173, 2798, 2953, 3406 |
| SfaNI | GCATC | 6 cut(s) | 1291, 1470, 1680, 1833, 2333, 2719 |
| SfcI | CTRYAG | 1 cut(s) | 128 |
| Sfr274I | CTCGAG | 2 cut(s) | 2108, 3122 |
| SfuI | TTCGAA | 1 cut(s) | 1104 |
| SinI | GGWCC | 3 cut(s) | 782, 2008, 2199 |
| SlaI | CTCGAG | 2 cut(s) | 2108, 3122 |
| SmaI | CCCGGG | 1 cut(s) | 2292 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 95, 1530, 2946 |
| SmlI | CTYRAG | 9 cut(s) | 70, 205, 1079, 1762, 1967, 2108, 2186, 2354, 3122 |
| SmoI | CTYRAG | 9 cut(s) | 70, 205, 1079, 1762, 1967, 2108, 2186, 2354, 3122 |
| SpeI | ACTAGT | 1 cut(s) | 787 |
| SsiI | CCGC | 4 cut(s) | 94, 1057, 2399, 2492 |
| SspI | AATATT | 2 cut(s) | 1394, 2880 |
| SstI | GAGCTC | 2 cut(s) | 204, 1086 |
| StyD4I | CCNGG | 4 cut(s) | 1540, 2289, 2290, 2980 |
| StyI | CCWWGG | 3 cut(s) | 306, 2501, 3203 |
| TaaI | ACNGT | 7 cut(s) | 122, 1629, 1997, 2046, 2514, 2833, 3149 |
| TaiI | ACGT | 4 cut(s) | 366, 544, 1015, 2416 |
| TaqII | GACCGA | 1 cut(s) | 180 |
| TatI | WGTACW | 1 cut(s) | 855 |
| TauI | GCSGC | 1 cut(s) | 2494 |
| TscAI | CASTG | 2 cut(s) | 427, 1842 |
| TseFI | GTSAC | 6 cut(s) | 932, 1091, 1245, 1991, 2961, 3115 |
| TseI | GCWGC | 5 cut(s) | 381, 1551, 1832, 2788, 3273 |
| Tsp45I | GTSAC | 6 cut(s) | 932, 1091, 1245, 1991, 2961, 3115 |
| TspGWI | ACGGA | 1 cut(s) | 2949 |
| TspMI | CCCGGG | 1 cut(s) | 2290 |
| TspRI | CASTG | 2 cut(s) | 427, 1842 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2156 |
| Vha464I | CTTAAG | 1 cut(s) | 2354 |
| VpaK11BI | GGWCC | 3 cut(s) | 782, 2008, 2199 |
| VspI | ATTAAT | 1 cut(s) | 2676 |
| XbaI | TCTAGA | 1 cut(s) | 955 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 27, 274 |
| XhoI | CTCGAG | 2 cut(s) | 2108, 3122 |
| XmaI | CCCGGG | 1 cut(s) | 2290 |
| XmiI | GTMKAC | 1 cut(s) | 3263 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2881 |
| Zsp2I | ATGCAT | 2 cut(s) | 1485, 2734 |