Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006084.1

Orthogroup ID

OG0000379

Physical Location & Seq

Genomic Coordinates Forward (+)

28428 .. 32109

Gene Structure 3682 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006084.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3486 bp

atggagttcttcgagatgtcgttggcgattattgtggtaattgtgacatggatcggtgccatagctacttttaagtggatatggactctactgaagcattggttcggttacatggttgaaaggcgtgagccaattggcatcgctactgagtggaagtatgatgtgtttttgagtttcaggggtcctgacactcgcaaggggattacagtcgacatacaggatcgacttaataggagtggaattaaaacgttcatggatgatcgagatcttgaagtagggaatgttattagtcccgctctcttaacagcaatcagagaatcaaagtttgcaatcgttgttctctcgcaaaattatgctttttctacttggtgtttggaggaacttagagagatttgtctctgcatggaagacaacagaattttgccacttttttatgatgttgatcctgcttatgttcgatatcagaacgggagatacggagatgctttctctaagcatgaaacctctgggcgacatgaatcaaagaaggtgaagcaatggagagctgctttaaaaaaagtggccgacatttctgggtggaatacaaatgattataagactcacaaagaacttgttgacatcattgtggaatctctccgcggtaaagtaccacctgatgcaattgaatccacaggagatttccaagcatatgaagcaacaacagaagccatgaataaggttatgaaggcgctaacagatgacgaggtcagtgccgttggtgtctacggcatgggcggcgttggaaagacaagcatggtgagacatgtagctgcacaagcctgcaaaaatggtacttttaaccattggattatggctgccatatcccaaagccctgactacagaaaaattcaaggcacattggcagacctattgggcatcaaattgatggaggagacagaagatggaagagccgctaggctgcttaatgagataaggagaagagaaaaactcctgataatcttggacgatgtttggaacagaacagaattgtcaaccataggaattcccagctacaaggagcttcaaaagtgcaattccaaagtcgtactcaccacacggatattgcatgtttgtaattccatggacagccgagaaaacattcctctcaatatcttatcaaaacaagattcttggaaattgtttctgagaaatgcaggggtagcgaagaagaagattcttgaatcgaccacttttgaggatgtggcaagaagagtagccagagaatgcaggggtctacccattgcattgatagcagttgcaagggcactcggagatgaggaccaggaggaatgggaaaatgcagctaaacaactagaggagtcgcgatatgccaatcctaaccatgaggatgaaaatgcattcaattgtatcagattaagctatgattacttgaaaaaggaagaccgcaagtcatgcttcttgctctgttgcctatacccagaagaccatgaaatcaaaatggaagacttgttcaggtatgcgatcggaaaaggattgtttcaagatgccgaaacaatggtaaaagccagaggaaaagtagtttcagtggtcaagtacctgaaagattctagcttgcttatggatggcgagaaaaaaggatgtgtaaagatgcatgatgtcatccgggatacagccattcaaattgccgaatccgggttttgggtgaaagctggctgtggtttaaagggttggccacgcggattacatgaaggctgcactgctatttcactgatgaggaacgaaattcgcaagctacccgaagaagagttggtatgtccaaatctccagcttttattactaaaccggaatgctgatttagatgagatcccagaaaagttcatccaaaagctgaatgaattaaggctcttggatcttagcgacactagtatttccgtgttaccgcaatcattcagtctccttaccaacctccaagctttgtatttagattctcgcaagaaatttattgacatttctatagtgggaaaactgaagaagcttgaaattcttagtatgagagaatgtcccgggagcgggggattttcgagaccagcacatgaatatcccgaggagagggaattgccgagagaaataggacatttgaccaatctaaggattttggatgtcaatcgcagttgtgatttggccggcgtgagtggtatggtcacaattccatctaaagtgatatcaaagttgcataaattagaagaattgtacctggtgtactgtggatttgaggaaaccaatatttttgatgagttagctggtttatcaaatttgaaaatagtgcagcttggcatatctgatgcaaaatacatccctaaaaatgttgaggccaaaccagattgggattacttttatataagtatcgtcggcagacgcgagcccgctgcataccaaacaggagatcataattcaagatccttgttttttaggcaagcaaccatgagtactttacctgattggtttatcaacgcggtgacaaaaaaaacagagaagctagagtatgagtgctgcaaagggatgagtgacattcttgtggaatatgaccatgggaggttacataaactcaagcatctcacagtatgtggttattttcttgattcctatgtgtacatgacagagttgatgaatacaacaaggctggttaaaaaaggaccagtgtttgagaatttggaagagttgcatctgagacaactgatccacctggaggagttgtgtgttggtgagttaccacctgggtctctcttcaatctaaaggtattgcatatgtcattttgtcataagttgaagaatgtatcaaaatttgtgcagagactaccaaatctggagaaactagatttaaattgtatgcgcggattagaatatgtgtttggatgcgaaaggttcgagccagaacaatcaaaactgagagagatgcatttgttggatctaggtgcactaagaaggatatgtaatggtcctgcgccacgtgtaatgttccagaatcttaaaagtttgatcatttaccgttgccggtcgctgcaaagtttgttcgcatctgatgtagccaagtgtctctttcaattggaagacctttttgtagagcggtgccctttgttgaaacgagtaattgaagcagtgaacaaggagaagacggttcttccaaaattgaagaacttggttttgaagcgacttcctatgttgtattgtaccagaacttggtatggtgcacgtgctactgttgatattaagtgtccttcattggaacacttgattgttgtggattgcccccagttttcattttctacttcttacgatctcttcaaatccttcaaaagcgagaaccatatttcattttcaacccctgcgtctgactactttggcagcacgaaaccagtccaactcaatgatccacaactgtaccaatttctacatgacaggtatgtctcttgtgaaatatttacttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0016020 GO:0023052 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LRR_8 NB-ARC TIR

Protein Analysis

1161

Amino Acids

133.07

Weight (kDa)

7.45

Isoelectric Point (pI)

42.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000379)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g17740 FvH4_1g17740 FvH4_1g17740 FvH4_1g17740 FvH4_3g42940 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43871 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43940 FvH4_3g43991 FvH4_3g44561 FvH4_3g44570 FvH4_3g44610 FvH4_3g44670 FvH4_3g44670 FvH4_3g44680 FvH4_3g44680 FvH4_3g44680 FvH4_3g45170 FvH4_3g45170 FvH4_3g45170 FvH4_3g45170 FvH4_3g45630 FvH4_3g45643 FvH4_3g45680 FvH4_3g45690 FvH4_3g45700 FvH4_3g45700 FvH4_3g45700 FvH4_3g45700 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730
malus_domestica	MD11G1020200.v1.1 MD15G1398500.v1.1
rosa_chinensis	RchiOBHm_Chr1g0326201 RchiOBHm_Chr5g0064091 RchiOBHm_Chr5g0076771 RchiOBHm_Chr5g0078181 RchiOBHm_Chr5g0078321 RchiOBHm_Chr5g0079331 RchiOBHm_Chr5g0079341 RchiOBHm_Chr5g0079351 RchiOBHm_Chr5g0079361 RchiOBHm_Chr5g0079441 RchiOBHm_Chr5g0079821 RchiOBHm_Chr5g0080071 RchiOBHm_Chr7g0212731 RchiOBHm_Chr7g0224201
rosa_laevigata	RLG00000002871
rosa_multiflora	Rmu_co8378879.1_g000001 Rmu_co8466133.1_g000001 Rmu_sc0000595.1_g000019 Rmu_sc0000616.1_g000025 Rmu_sc0000631.1_g000033 Rmu_sc0000945.1_g000004 Rmu_sc0001148.1_g000022 Rmu_sc0001226.1_g000016 Rmu_sc0002187.1_g000037 Rmu_sc0006084.1_g000005 Rmu_sc0006084.1_g000009 Rmu_sc0006084.1_g000019 Rmu_sc0006084.1_g000021
rosa_roxburghii	Rroxscaffold_1G00001540 Rroxscaffold_1G00003210 Rroxscaffold_1G00003250 Rroxscaffold_1G00003340 Rroxscaffold_1G00003580 Rroxscaffold_1G00003940 Rroxscaffold_3G00228660 Rroxscaffold_3G00247850
rosa_rugosa	Rorug05G0465800 Rorug05G0466100 Rorug07G0125700 Rorug07G0136300
rosa_wichuraiana	Rw0G005160 Rw0G022760 Rw5G047710 Rw5G048070 Rw5G048080 Rw5G048150 Rw5G048180 Rw5G048210 Rw5G048250 Rw5G048290 Rw7G023250 Rw7G030960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	594
AasI	GACNNNNNNGTC	1 cut(s)	3461
AccB1I	GGYRCC	2 cut(s)	56, 3126
AccB7I	CCANNNNNTGG	1 cut(s)	3237
AccBSI	CCGCTC	3 cut(s)	296, 2070, 3124
AccI	GTMKAC	3 cut(s)	210, 762, 1273
AccII	CGCG	6 cut(s)	639, 1363, 1737, 2418, 2513, 2892
AclI	AACGTT	1 cut(s)	248
AclWI	GGATC	9 cut(s)	59, 228, 437, 1858, 1917, 2451, 2731, 2973, 3422
AcoI	YGGCCR	3 cut(s)	561, 1730, 2181
AcsI	RAATTY	9 cut(s)	417, 885, 1041, 1782, 1997, 2040, 2311, 2707, 2840
AcuI	CTGAAG	2 cut(s)	113, 2048
AcvI	CACGTG	2 cut(s)	3008, 3251
AfiI	CCNNNNNNNGG	8 cut(s)	1692, 1698, 2069, 2070, 2109, 2148, 2746, 3237
AflIII	ACRYGT	2 cut(s)	802, 3007
AhdI	GACNNNNNGTC	1 cut(s)	1447
AhlI	ACTAGT	1 cut(s)	1922
AjnI	CCWGG	4 cut(s)	1320, 2253, 2742, 2773
AjuI	GAANNNNNNNTTGG	2 cut(s)	2892, 2924
AloI	GAACNNNNNNTCC	2 cut(s)	1493, 1525
Alw21I	GWGCWC	2 cut(s)	2977, 3250
Alw44I	GTGCAC	2 cut(s)	2973, 3246
AlwI	GGATC	9 cut(s)	59, 228, 437, 1858, 1917, 2451, 2731, 2973, 3422
Ama87I	CYCGRG	2 cut(s)	2063, 2102
AoxI	GGCC	4 cut(s)	561, 1730, 2181, 2370
ApaLI	GTGCAC	2 cut(s)	2973, 3246
ApoI	RAATTY	9 cut(s)	417, 885, 1041, 1782, 1997, 2040, 2311, 2707, 2840
Asp700I	GAANNNNTTC	1 cut(s)	1137
AspLEI	GCGC	3 cut(s)	730, 2892, 3004
AspS9I	GGNCC	4 cut(s)	182, 1318, 2693, 2996
AsuC2I	CCSGG	4 cut(s)	1664, 1693, 2064, 2065
AsuHPI	GGTGA	6 cut(s)	541, 808, 1081, 1714, 2527, 2774
AvaI	CYCGRG	2 cut(s)	2063, 2102
AvaII	GGWCC	4 cut(s)	182, 1318, 2693, 2996
BaeGI	GKGCMC	4 cut(s)	1306, 2977, 3131, 3250
BaeI	ACNNNNGTAYC	2 cut(s)	3422, 3455
BalI	TGGCCA	1 cut(s)	1732
BanI	GGYRCC	2 cut(s)	56, 3126
BanII	GRGCYC	1 cut(s)	2424
BbrPI	CACGTG	2 cut(s)	3008, 3251
BbsI	GAAGAC	6 cut(s)	414, 1446, 1488, 1509, 3114, 3176
Bbv12I	GWGCWC	2 cut(s)	2977, 3250
BccI	CCATC	4 cut(s)	919, 935, 1616, 2218
BceAI	ACGGC	2 cut(s)	737, 781
BcgI	CGANNNNNNTGC	4 cut(s)	731, 765, 2408, 2442
BciT130I	CCWGG	4 cut(s)	1322, 2255, 2744, 2775
BciVI	GTATCC	1 cut(s)	1660
BclI	TGATCA	1 cut(s)	3036
BcnI	CCSGG	4 cut(s)	1664, 1693, 2064, 2065
BcuI	ACTAGT	1 cut(s)	1922
BfaI	CTAG	7 cut(s)	954, 1352, 1608, 1923, 2537, 2873, 2969
BfmI	CTRYAG	2 cut(s)	877, 2013
BfoI	RGCGCY	1 cut(s)	731
BfuI	GTATCC	1 cut(s)	1660
BglII	AGATCT	1 cut(s)	265
BmcAI	AGTACT	1 cut(s)	2488
Bme1390I	CCNGG	8 cut(s)	1322, 1664, 1693, 2064, 2065, 2255, 2744, 2775
Bme18I	GGWCC	4 cut(s)	182, 1318, 2693, 2996
BmeRI	GACNNNNNGTC	1 cut(s)	1447
BmeT110I	CYCGRG	2 cut(s)	2063, 2102
BmgT120I	GGNCC	4 cut(s)	182, 1318, 2693, 2996
BmiI	GGNNCC	3 cut(s)	58, 183, 3128
BmrFI	CCNGG	8 cut(s)	1322, 1664, 1693, 2064, 2065, 2255, 2744, 2775
BmrI	ACTGGG	1 cut(s)	3304
BmuI	ACTGGG	1 cut(s)	3304
BpiI	GAAGAC	6 cut(s)	414, 1446, 1488, 1509, 3114, 3176
BplI	GAGNNNNNCTC	2 cut(s)	972, 1004
BpmI	CTGGAG	3 cut(s)	1808, 2765, 2885
BpuEI	CTTGAG	1 cut(s)	2591
BpuMI	CCSGG	4 cut(s)	1664, 1693, 2064, 2065
BsaAI	YACGTR	2 cut(s)	3008, 3251
BsaBI	GATNNNNATC	3 cut(s)	264, 441, 2163
BsaI	GGTCTC	2 cut(s)	2077, 2784
BsaJI	CCNNGG	6 cut(s)	637, 1119, 2063, 2103, 2587, 2774
BsaWI	WCCGGW	1 cut(s)	1842
BsaXI	ACNNNNNCTCC	2 cut(s)	2738, 2768
Bsc4I	CCNNNNNNNGG	8 cut(s)	1692, 1698, 2069, 2070, 2109, 2148, 2746, 3237
Bse118I	RCCGGY	2 cut(s)	2183, 3051
Bse1I	ACTGG	3 cut(s)	2696, 3310, 3413
Bse3DI	GCAATG	2 cut(s)	542, 1278
Bse8I	GATNNNNATC	3 cut(s)	264, 441, 2163
BseBI	CCWGG	4 cut(s)	1322, 2255, 2744, 2775
BseDI	CCNNGG	6 cut(s)	637, 1119, 2063, 2103, 2587, 2774
BseJI	GATNNNNATC	3 cut(s)	264, 441, 2163
BseLI	CCNNNNNNNGG	8 cut(s)	1692, 1698, 2069, 2070, 2109, 2148, 2746, 3237
BseMI	GCAATG	2 cut(s)	542, 1278
BseMII	CTCAG	4 cut(s)	138, 1175, 2717, 2936
BseNI	ACTGG	3 cut(s)	2696, 3310, 3413
BseRI	GAGGAG	4 cut(s)	944, 1370, 2120, 2762
BseSI	GKGCMC	4 cut(s)	1306, 2977, 3131, 3250
BseYI	CCCAGC	1 cut(s)	1046
BsgI	GTGCAG	4 cut(s)	795, 1738, 2345, 2867
Bsh1236I	CGCG	6 cut(s)	639, 1363, 1737, 2418, 2513, 2892
Bsh1285I	CGRYCG	2 cut(s)	1524, 3056
BshFI	GGCC	4 cut(s)	563, 1732, 2183, 2372
BshNI	GGYRCC	2 cut(s)	56, 3126
BsiEI	CGRYCG	2 cut(s)	1524, 3056
BsiHKAI	GWGCWC	2 cut(s)	2977, 3250
BsiHKCI	CYCGRG	2 cut(s)	2063, 2102
BsiSI	CCGG	6 cut(s)	1663, 1692, 1843, 2064, 2184, 3052
BslFI	GGGAC	2 cut(s)	276, 2046
BslI	CCNNNNNNNGG	8 cut(s)	1692, 1698, 2069, 2070, 2109, 2148, 2746, 3237
BsmFI	GGGAC	2 cut(s)	276, 2046
BsmI	GAATGC	3 cut(s)	1268, 1397, 1852
BsnI	GGCC	4 cut(s)	563, 1732, 2183, 2372
Bso31I	GGTCTC	2 cut(s)	2077, 2784
BsoBI	CYCGRG	2 cut(s)	2063, 2102
Bsp1286I	GDGCHC	5 cut(s)	1306, 2424, 2977, 3131, 3250
Bsp1407I	TGTACA	1 cut(s)	2649
Bsp19I	CCATGG	2 cut(s)	1119, 2587
Bsp68I	TCGCGA	1 cut(s)	1363
BspANI	GGCC	4 cut(s)	563, 1732, 2183, 2372
BspCNI	CTCAG	4 cut(s)	139, 1176, 2718, 2937
BspFNI	CGCG	6 cut(s)	639, 1363, 1737, 2418, 2513, 2892
BspLI	GGNNCC	3 cut(s)	58, 183, 3128
BspPI	GGATC	9 cut(s)	59, 228, 437, 1858, 1917, 2451, 2731, 2973, 3422
BspQI	GCTCTTC	1 cut(s)	940
BspT107I	GGYRCC	2 cut(s)	56, 3126
BspTNI	GGTCTC	2 cut(s)	2077, 2784
BsrBI	CCGCTC	3 cut(s)	296, 2070, 3124
BsrDI	GCAATG	2 cut(s)	542, 1278
BsrFI	RCCGGY	2 cut(s)	2183, 3051
BsrGI	TGTACA	1 cut(s)	2649
BsrI	ACTGG	3 cut(s)	2696, 3310, 3413
BssAI	RCCGGY	2 cut(s)	2183, 3051
BssECI	CCNNGG	6 cut(s)	637, 1119, 2063, 2103, 2587, 2774
BssT1I	CCWWGG	2 cut(s)	1119, 2587
Bst2UI	CCWGG	4 cut(s)	1322, 2255, 2744, 2775
Bst4CI	ACNGT	7 cut(s)	208, 2264, 2620, 3047, 3175, 3259, 3438
Bst6I	CTCTTC	7 cut(s)	940, 973, 1243, 1797, 2709, 2789, 3344
BstAPI	GCANNNNNTGC	1 cut(s)	1452
BstAUI	TGTACA	1 cut(s)	2649
BstBAI	YACGTR	2 cut(s)	3008, 3251
BstC8I	GCNNGC	8 cut(s)	820, 1613, 1711, 1790, 2185, 2420, 2424, 2475
BstDSI	CCRYGG	3 cut(s)	637, 1119, 2587
BstFNI	CGCG	6 cut(s)	639, 1363, 1737, 2418, 2513, 2892
BstH2I	RGCGCY	1 cut(s)	731
BstHHI	GCGC	3 cut(s)	730, 2892, 3004
BstMCI	CGRYCG	2 cut(s)	1524, 3056
BstMWI	GCNNNNNNNGC	6 cut(s)	692, 774, 815, 1199, 1289, 1452
BstNI	CCWGG	4 cut(s)	1322, 2255, 2744, 2775
BstNSI	RCATGY	2 cut(s)	806, 1109
BstSCI	CCNGG	8 cut(s)	1320, 1662, 1691, 2062, 2063, 2253, 2742, 2773
BstSFI	CTRYAG	2 cut(s)	877, 2013
BstSLI	GKGCMC	4 cut(s)	1306, 2977, 3131, 3250
BstUI	CGCG	6 cut(s)	639, 1363, 1737, 2418, 2513, 2892
BstV2I	GAAGAC	6 cut(s)	414, 1446, 1488, 1509, 3114, 3176
BstX2I	RGATCY	5 cut(s)	265, 1863, 1909, 2456, 2965
BstYI	RGATCY	5 cut(s)	265, 1863, 1909, 2456, 2965
BsuI	GTATCC	1 cut(s)	1660
BsuRI	GGCC	4 cut(s)	563, 1732, 2183, 2372
BtgI	CCRYGG	3 cut(s)	637, 1119, 2587
BtgZI	GCGATG	1 cut(s)	124
BtsI	GCAGTG	2 cut(s)	1755, 3162
BtsIMutI	CAGTG	6 cut(s)	754, 1590, 1755, 1766, 2703, 3162
BtuMI	TCGCGA	1 cut(s)	1363
Cac8I	GCNNGC	8 cut(s)	820, 1613, 1711, 1790, 2185, 2420, 2424, 2475
CfoI	GCGC	3 cut(s)	730, 2892, 3004
Cfr10I	RCCGGY	2 cut(s)	2183, 3051
Cfr13I	GGNCC	4 cut(s)	182, 1318, 2693, 2996
Cfr42I	CCGCGG	1 cut(s)	640
Cfr9I	CCCGGG	1 cut(s)	2063
CseI	GACGC	2 cut(s)	2424, 3375
CsiI	ACCWGGT	1 cut(s)	2253
DraI	TTTAAA	3 cut(s)	552, 1722, 2880
DrdI	GACNNNNNNGTC	1 cut(s)	3461
DriI	GACNNNNNGTC	1 cut(s)	1447
DseDI	GACNNNNNNGTC	1 cut(s)	3461
EaeI	YGGCCR	3 cut(s)	561, 1730, 2181
Eam1104I	CTCTTC	7 cut(s)	940, 973, 1243, 1797, 2709, 2789, 3344
Eam1105I	GACNNNNNGTC	1 cut(s)	1447
EarI	CTCTTC	7 cut(s)	940, 973, 1243, 1797, 2709, 2789, 3344
Eco130I	CCWWGG	2 cut(s)	1119, 2587
Eco24I	GRGCYC	1 cut(s)	2424
Eco31I	GGTCTC	2 cut(s)	2077, 2784
Eco32I	GATATC	2 cut(s)	461, 2223
Eco47I	GGWCC	4 cut(s)	182, 1318, 2693, 2996
Eco57I	CTGAAG	2 cut(s)	113, 2048
Eco72I	CACGTG	2 cut(s)	3008, 3251
Eco88I	CYCGRG	2 cut(s)	2063, 2102
EcoO109I	RGGNCCY	1 cut(s)	182
EcoRI	GAATTC	1 cut(s)	1041
EcoRII	CCWGG	4 cut(s)	1320, 2253, 2742, 2773
EcoRV	GATATC	2 cut(s)	461, 2223
EcoT14I	CCWWGG	2 cut(s)	1119, 2587
EcoT22I	ATGCAT	3 cut(s)	1399, 1653, 2958
EcoT38I	GRGCYC	1 cut(s)	2424
ErhI	CCWWGG	2 cut(s)	1119, 2587
FalI	AAGNNNNNCTT	4 cut(s)	1439, 1471, 3080, 3112
FaqI	GGGAC	2 cut(s)	276, 2046
FauI	CCCGC	3 cut(s)	301, 2063, 2431
FauNDI	CATATG	2 cut(s)	688, 2805
FbaI	TGATCA	1 cut(s)	3036
FblI	GTMKAC	3 cut(s)	210, 762, 1273
FriOI	GRGCYC	1 cut(s)	2424
FspBI	CTAG	7 cut(s)	954, 1352, 1608, 1923, 2537, 2873, 2969
GlaI	GCGC	3 cut(s)	729, 2891, 3003
GsaI	CCCAGC	1 cut(s)	1050
GsuI	CTGGAG	3 cut(s)	1808, 2765, 2885
HaeII	RGCGCY	1 cut(s)	731
HaeIII	GGCC	4 cut(s)	563, 1732, 2183, 2372
HapII	CCGG	6 cut(s)	1663, 1692, 1843, 2064, 2184, 3052
HgaI	GACGC	2 cut(s)	2424, 3375
HhaI	GCGC	3 cut(s)	730, 2892, 3004
Hin6I	GCGC	3 cut(s)	728, 2890, 3002
HinP1I	GCGC	3 cut(s)	728, 2890, 3002
HincII	GTYRAC	3 cut(s)	211, 616, 1032
HindII	GTYRAC	3 cut(s)	211, 616, 1032
HindIII	AAGCTT	2 cut(s)	1971, 2033
HpaII	CCGG	6 cut(s)	1663, 1692, 1843, 2064, 2184, 3052
HphI	GGTGA	6 cut(s)	541, 808, 1081, 1714, 2527, 2774
Hpy99I	CGWCG	1 cut(s)	2411
HpyAV	CCTTC	6 cut(s)	520, 718, 1742, 2976, 3285, 3358
HpyCH4III	ACNGT	7 cut(s)	208, 2264, 2620, 3047, 3175, 3259, 3438
HpyCH4IV	ACGT	3 cut(s)	248, 3007, 3250
HpyF10VI	GCNNNNNNNGC	6 cut(s)	692, 774, 815, 1199, 1289, 1452
HpySE526I	ACGT	3 cut(s)	248, 3007, 3250
HspAI	GCGC	3 cut(s)	728, 2890, 3002
KroI	GCCGGC	1 cut(s)	2183
KroNI	GCCGGC	1 cut(s)	2185
Ksp22I	TGATCA	1 cut(s)	3036
KspI	CCGCGG	1 cut(s)	640
LguI	GCTCTTC	1 cut(s)	940
LmnI	GCTCC	2 cut(s)	1057, 2067
MabI	ACCWGGT	1 cut(s)	2253
MaeI	CTAG	7 cut(s)	954, 1352, 1608, 1923, 2537, 2873, 2969
MaeII	ACGT	3 cut(s)	248, 3007, 3250
MaeIII	GTNAC	8 cut(s)	43, 107, 1935, 2200, 2515, 2564, 2595, 2766
MbiI	CCGCTC	3 cut(s)	296, 2070, 3124
MfeI	CAATTG	4 cut(s)	132, 660, 1402, 3101
MflI	RGATCY	5 cut(s)	265, 1863, 1909, 2456, 2965
MhlI	GDGCHC	5 cut(s)	1306, 2424, 2977, 3131, 3250
MlsI	TGGCCA	1 cut(s)	1732
MluNI	TGGCCA	1 cut(s)	1732
MlyI	GAGTC	3 cut(s)	79, 592, 1367
MmeI	TCCRAC	3 cut(s)	760, 2943, 3442
Mox20I	TGGCCA	1 cut(s)	1732
Mph1103I	ATGCAT	3 cut(s)	1399, 1653, 2958
MroNI	GCCGGC	1 cut(s)	2183
MroXI	GAANNNNTTC	1 cut(s)	1137
MscI	TGGCCA	1 cut(s)	1732
MslI	CAYNNNNRTG	3 cut(s)	623, 1386, 2573
Msp20I	TGGCCA	1 cut(s)	1732
MspA1I	CMGCKG	2 cut(s)	639, 2426
MspI	CCGG	6 cut(s)	1663, 1692, 1843, 2064, 2184, 3052
MspR9I	CCNGG	8 cut(s)	1322, 1664, 1693, 2064, 2065, 2255, 2744, 2775
MunI	CAATTG	4 cut(s)	132, 660, 1402, 3101
Mva1269I	GAATGC	3 cut(s)	1268, 1397, 1852
MvaI	CCWGG	4 cut(s)	1322, 2255, 2744, 2775
MvnI	CGCG	6 cut(s)	639, 1363, 1737, 2418, 2513, 2892
MwoI	GCNNNNNNNGC	6 cut(s)	692, 774, 815, 1199, 1289, 1452
NaeI	GCCGGC	1 cut(s)	2185
NciI	CCSGG	4 cut(s)	1664, 1693, 2064, 2065
NcoI	CCATGG	2 cut(s)	1119, 2587
NdeI	CATATG	2 cut(s)	688, 2805
NgoMIV	GCCGGC	1 cut(s)	2183
NlaIV	GGNNCC	3 cut(s)	58, 183, 3128
NmeAIII	GCCGAG	2 cut(s)	1154, 2145
NmuCI	GTSAC	4 cut(s)	43, 2200, 2515, 2564
NruI	TCGCGA	1 cut(s)	1363
NsiI	ATGCAT	3 cut(s)	1399, 1653, 2958
NspI	RCATGY	2 cut(s)	806, 1109
PciI	ACATGT	1 cut(s)	802
PciSI	GCTCTTC	1 cut(s)	940
PcsI	WCGNNNNNNNCGW	1 cut(s)	2415
PctI	GAATGC	3 cut(s)	1268, 1397, 1852
PdiI	GCCGGC	1 cut(s)	2185
PdmI	GAANNNNTTC	1 cut(s)	1137
PflFI	GACNNNGTC	1 cut(s)	743
PflMI	CCANNNNNTGG	1 cut(s)	3237
PfoI	TCCNGGA	1 cut(s)	1662
Ple19I	CGATCG	1 cut(s)	1524
PleI	GAGTC	3 cut(s)	79, 592, 1366
PmaCI	CACGTG	2 cut(s)	3008, 3251
PmlI	CACGTG	2 cut(s)	3008, 3251
PpsI	GAGTC	3 cut(s)	79, 592, 1366
Ppu21I	YACGTR	2 cut(s)	3008, 3251
PpuMI	RGGWCCY	1 cut(s)	182
PscI	ACATGT	1 cut(s)	802
PsiI	TTATAA	1 cut(s)	594
Psp1406I	AACGTT	1 cut(s)	248
Psp5II	RGGWCCY	1 cut(s)	182
Psp6I	CCWGG	4 cut(s)	1320, 2253, 2742, 2773
PspCI	CACGTG	2 cut(s)	3008, 3251
PspFI	CCCAGC	1 cut(s)	1046
PspGI	CCWGG	4 cut(s)	1320, 2253, 2742, 2773
PspN4I	GGNNCC	3 cut(s)	58, 183, 3128
PspPI	GGNCC	4 cut(s)	182, 1318, 2693, 2996
PspPPI	RGGWCCY	1 cut(s)	182
PsrI	GAACNNNNNNTAC	2 cut(s)	458, 490
PsuI	RGATCY	5 cut(s)	265, 1863, 1909, 2456, 2965
PsyI	GACNNNGTC	1 cut(s)	743
PvuI	CGATCG	1 cut(s)	1524
RruI	TCGCGA	1 cut(s)	1363
RseI	CAYNNNNRTG	3 cut(s)	623, 1386, 2573
SacII	CCGCGG	1 cut(s)	640
SalI	GTCGAC	1 cut(s)	209
SapI	GCTCTTC	1 cut(s)	940
Sau96I	GGNCC	4 cut(s)	182, 1318, 2693, 2996
ScaI	AGTACT	1 cut(s)	2488
SchI	GAGTC	3 cut(s)	79, 592, 1367
ScrFI	CCNGG	8 cut(s)	1322, 1664, 1693, 2064, 2065, 2255, 2744, 2775
SduI	GDGCHC	5 cut(s)	1306, 2424, 2977, 3131, 3250
SexAI	ACCWGGT	1 cut(s)	2253
SfcI	CTRYAG	2 cut(s)	877, 2013
Sfr303I	CCGCGG	1 cut(s)	640
SgrBI	CCGCGG	1 cut(s)	640
SinI	GGWCC	4 cut(s)	182, 1318, 2693, 2996
SmaI	CCCGGG	1 cut(s)	2065
SmiI	ATTTAAAT	1 cut(s)	2880
SmiMI	CAYNNNNRTG	3 cut(s)	623, 1386, 2573
SmlI	CTYRAG	1 cut(s)	2606
SmoI	CTYRAG	1 cut(s)	2606
SpeI	ACTAGT	1 cut(s)	1922
SspI	AATATT	2 cut(s)	2284, 3477
SspMI	CTAG	7 cut(s)	954, 1352, 1608, 1923, 2537, 2873, 2969
StyD4I	CCNGG	8 cut(s)	1320, 1662, 1691, 2062, 2063, 2253, 2742, 2773
StyI	CCWWGG	2 cut(s)	1119, 2587
SwaI	ATTTAAAT	1 cut(s)	2880
TaaI	ACNGT	7 cut(s)	208, 2264, 2620, 3047, 3175, 3259, 3438
TaiI	ACGT	3 cut(s)	251, 3010, 3253
TaqI	TCGA	8 cut(s)	12, 210, 223, 262, 457, 1223, 2081, 2925
TatI	WGTACW	3 cut(s)	2259, 2486, 2649
TauI	GCSGC	2 cut(s)	777, 953
TscAI	CASTG	6 cut(s)	754, 1590, 1762, 1773, 2703, 3162
TseFI	GTSAC	4 cut(s)	43, 2200, 2515, 2564
Tsp45I	GTSAC	4 cut(s)	43, 2200, 2515, 2564
TspGWI	ACGGA	3 cut(s)	492, 1111, 1921
TspMI	CCCGGG	1 cut(s)	2063
TspRI	CASTG	6 cut(s)	754, 1590, 1762, 1773, 2703, 3162
Tth111I	GACNNNGTC	1 cut(s)	743
Van91I	CCANNNNNTGG	1 cut(s)	3237
VneI	GTGCAC	2 cut(s)	2973, 3246
VpaK11BI	GGWCC	4 cut(s)	182, 1318, 2693, 2996
XapI	RAATTY	9 cut(s)	417, 885, 1041, 1782, 1997, 2040, 2311, 2707, 2840
XceI	RCATGY	2 cut(s)	806, 1109
XmaI	CCCGGG	1 cut(s)	2063
XmiI	GTMKAC	3 cut(s)	210, 762, 1273
XmnI	GAANNNNTTC	1 cut(s)	1137
XspI	CTAG	7 cut(s)	954, 1352, 1608, 1923, 2537, 2873, 2969
ZrmI	AGTACT	1 cut(s)	2488
Zsp2I	ATGCAT	3 cut(s)	1399, 1653, 2958

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.