Rw5G048150

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000379
Physical Location & Seq
Reverse (-)
83571007 .. 83573329
2323 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G048150.1

Sequence Viewer

Length: 2085 bp
TCTCCTCGCTTCTTTGCTTCTCACTGGAAATTAGTCTCTTTCCTGCTGGTTTCAATGGCCTCCTCTTCGTCATCATCAGCTCGTCGCTGGAAGTATGATGTTTTTTTGAGTTTCAGGGGTCCTGACACTCGCAAGGGGATTACATTCGACATACACGTTCGACTTAATAGGAGTGGAATTAAAACGTTCATGGATGATCGAGATCTTGAAGTAGGGAATGTTATTAGTCCCGCTCTCTTAACAGCAATCAGCGGATCAAAGTTTGCAATCGTTGTTCTCTCGCAAAATTATGCTTCTTCTGCTTGGTGTTTGGAGGAACTTAGAGAGATTTGTGTATCCATGGAAGACAGCAGAATTTTGCCACTTTTTTATGATGTTGATCCTACTGATGTTAGATATCAGAAGAAGAGTTTCGAAGATGCTTTCTCTAAGCATGAAACCTCTGAGCGACATGAATCAGAGAAGGTGAAGCAATGGAGAGCTGCTTTAAACAAAGTGGCCAATATCTCTGGGTGGAATACAAATGATTATAAGACTCACAAAGAACTTGTTGACGTCATTGTGGAATCTCTCTGCAGTAAAGTACCACCTGATGCAATTGAATCCACAGGAGATTTCCAAGAATATGAAGCAACAAGACAAGCCATGGATGAGGTTAAGAAGGCGCTAACAGATGACGAGATCACTGCCGTTGGTGTCTACGGCATGGGCGGCGTTGGAAAGACAAGCATGGTGAGACATGTAGCTGCACAAGCCTGCAAAAATGGTACTTTTAACCATTGGATTATGGCTGCCATATCCCAAAGCCCTGACTACAGAAAAGTTCAAGGCACATTGGCAGACCTATTGGGCATCAAATTGATGGCGGAGACAGAAGATGGAAGAGCCGCTAGGCTGCTTAATGAGATAAGGAGAAGAGAAAAACTCCTGATTATCTTGGACGATGTTTGGAACAGAACAGAATTGTCAACCATAGGAATTCCCAGCTACGAGGAGCTTCAAAAGTGCAGATCCAAAGTCTTACTCACCACACGGAGAAGGAATGTCTGTCATGTCATGAAGTGCCAAGCAAGCATTCCTCTCAATATCTTATCAGAACAAGATTCTTGGACCTTGTTTGTGAGAAATACAAGGTCTTTTGAATGGACCACTTTTGAGGGTGTAGCGAGGAAGGTAGCTGGAGAATGCAGGGGTCTACCCATTGCATTGATAGCAGTTGCAAGGGCACTCGGAGATAAAGATGAGGCGGAATGGCAAAAAGCAGTTCGAAGACTAGAGAAGTCGCAAGCTGCAACAGTTGAGGATGAGGAAGATGCCTTCAAATGTATAAAATTGAGCTATGATTACTTGAAAGATGAGGATTCCAAGTCATGCTTCTTGCTCTGTTGCCTGTACCCAGAAGACTATGACATCCAACTGAAAAACTTATTCAAGTATGCAATCGGGACAGGATTGTTTCAAGATGCCGAAACAATCGAAGAAGCCAGAGGAACAGCAGATTCAGTGGTCAAGTACCTGAAAGATTCTAGCTTGCTTTTGGAAGGTAAATACATTGGATGTATAAAGATGCATGATGTCATCCGGGATACGGCCCTGAATATTGCAAAATCTAAAGATGGGCACGGGTTTCTGGTAAAAGCTGGCTGTGGTTTAAAGCATTGGCCATGTGGATCACATCAAGGCTACTCTGCAATCTCACTAATGAGGAACAAAATTCGCAAGCTGCCCGATGAAGAGTTGGTATGTCCAGATCTCCAGATTTTATTACTAAACCAGAATGATGATTTAAATGAGATCCCAGAAACGCTTATCCAAAGTCTGAATGAATTAAGGCTCTTGGATCTTAGCAACACGAGTATTTCCTCTCTACCCCAATCATTCAGTCTCCTTACCAGCCTCCAAGCTTTGTATTTAGATTTTTGCGAGAAATTGATTGACATTTCTATAGTGGGAAAACTGAAGAAGCTTGAAATTCTTAGTATGAGGGAATATCCTGGGGAGGAATTGTCGAGAGAAATCGGACATCTGACCAATCTAAGGATTTTGGATGTCAGTGCCTCCTGTTTTGGAGGTTTGCGTATCTGA

Protein Analysis

694

Amino Acids

78.26

Weight (kDa)

6.01

Isoelectric Point (pI)

46.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 31 - 195 7e-45 TIR domain
TIR_2 PF13676 34 - 142 1.7e-13 TIR domain
NB-ARC PF00931 214 - 374 3e-29 NB-ARC domain
LRR_8 PF13855 584 - 641 1.7e-07 Leucine rich repeat
LRR_14 PF23598 593 - 685 1.2e-12 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000379)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17740 FvH4_1g17740 FvH4_1g17740 FvH4_1g17740 FvH4_3g42940 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43871 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43940 FvH4_3g43991 FvH4_3g44561 FvH4_3g44570 FvH4_3g44610 FvH4_3g44670 FvH4_3g44670 FvH4_3g44680 FvH4_3g44680 FvH4_3g44680 FvH4_3g45170 FvH4_3g45170 FvH4_3g45170 FvH4_3g45170 FvH4_3g45630 FvH4_3g45643 FvH4_3g45680 FvH4_3g45690 FvH4_3g45700 FvH4_3g45700 FvH4_3g45700 FvH4_3g45700 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730
malus_domestica MD11G1020200.v1.1 MD15G1398500.v1.1
rosa_chinensis RchiOBHm_Chr1g0326201 RchiOBHm_Chr5g0064091 RchiOBHm_Chr5g0076771 RchiOBHm_Chr5g0078181 RchiOBHm_Chr5g0078321 RchiOBHm_Chr5g0079331 RchiOBHm_Chr5g0079341 RchiOBHm_Chr5g0079351 RchiOBHm_Chr5g0079361 RchiOBHm_Chr5g0079441 RchiOBHm_Chr5g0079821 RchiOBHm_Chr5g0080071 RchiOBHm_Chr7g0212731 RchiOBHm_Chr7g0224201
rosa_laevigata RLG00000002871
rosa_multiflora Rmu_co8378879.1_g000001 Rmu_co8466133.1_g000001 Rmu_sc0000595.1_g000019 Rmu_sc0000616.1_g000025 Rmu_sc0000631.1_g000033 Rmu_sc0000945.1_g000004 Rmu_sc0001148.1_g000022 Rmu_sc0001226.1_g000016 Rmu_sc0002187.1_g000037 Rmu_sc0006084.1_g000005 Rmu_sc0006084.1_g000009 Rmu_sc0006084.1_g000019 Rmu_sc0006084.1_g000021
rosa_roxburghii Rroxscaffold_1G00001540 Rroxscaffold_1G00003210 Rroxscaffold_1G00003250 Rroxscaffold_1G00003340 Rroxscaffold_1G00003580 Rroxscaffold_1G00003940 Rroxscaffold_3G00228660 Rroxscaffold_3G00247850
rosa_rugosa Rorug05G0465800 Rorug05G0466100 Rorug07G0125700 Rorug07G0136300
rosa_wichuraiana Rw0G005160 Rw0G022760 Rw5G047710 Rw5G048070 Rw5G048080 Rw5G048150 Rw5G048180 Rw5G048210 Rw5G048250 Rw5G048290 Rw7G023250 Rw7G030960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 531
AatII GACGTC 1 cut(s) 558
AccBSI CCGCTC 1 cut(s) 233
AccI GTMKAC 2 cut(s) 699, 1195
AciI CCGC 6 cut(s) 231, 252, 711, 866, 888, 1247
AclI AACGTT 1 cut(s) 185
AclWI GGATC 6 cut(s) 262, 374, 1005, 1678, 1789, 1848
AcoI YGGCCR 2 cut(s) 498, 1661
AcsI RAATTY 4 cut(s) 354, 978, 1713, 1971
AcuI CTGAAG 1 cut(s) 1979
AcyI GRCGYC 1 cut(s) 555
AfaI GTAC 4 cut(s) 585, 769, 1394, 1514
AfiI CCNNNNNNNGG 2 cut(s) 1588, 2037
AflIII ACRYGT 2 cut(s) 154, 739
AjnI CCWGG 1 cut(s) 1993
AjuI GAANNNNNNNTTGG 4 cut(s) 1059, 1091, 1358, 1390
Alw26I GTCTC 4 cut(s) 40, 730, 863, 1889
AlwI GGATC 6 cut(s) 262, 374, 1005, 1678, 1789, 1848
AoxI GGCC 4 cut(s) 57, 498, 1590, 1661
ApeKI GCWGC 6 cut(s) 482, 746, 791, 895, 1289, 1723
ApoI RAATTY 4 cut(s) 354, 978, 1713, 1971
Asp700I GAANNNNTTC 1 cut(s) 410
AspLEI GCGC 1 cut(s) 667
AspS9I GGNCC 4 cut(s) 119, 1110, 1146, 1591
AsuC2I CCSGG 1 cut(s) 1583
AsuHPI GGTGA 3 cut(s) 478, 745, 1018
AsuII TTCGAA 2 cut(s) 414, 1267
AvaII GGWCC 3 cut(s) 119, 1110, 1146
BaeGI GKGCMC 2 cut(s) 1228, 1623
BalI TGGCCA 2 cut(s) 500, 1663
BauI CACGAG 1 cut(s) 1852
BbsI GAAGAC 3 cut(s) 351, 1276, 1407
BbvI GCAGC 6 cut(s) 469, 733, 778, 882, 1276, 1710
BccI CCATC 3 cut(s) 856, 872, 1610
BceAI ACGGC 3 cut(s) 674, 718, 1605
BcgI CGANNNNNNTGC 2 cut(s) 668, 702
BciT130I CCWGG 1 cut(s) 1995
BciVI GTATCC 2 cut(s) 346, 1579
BcnI CCSGG 1 cut(s) 1583
BcoDI GTCTC 4 cut(s) 40, 730, 863, 1889
BfaI CTAG 3 cut(s) 891, 1274, 1527
BfmI CTRYAG 3 cut(s) 574, 814, 1944
BfoI RGCGCY 1 cut(s) 668
BfuI GTATCC 2 cut(s) 346, 1579
BglII AGATCT 2 cut(s) 202, 1750
BisI GCNGC 8 cut(s) 483, 712, 747, 792, 888, 896, 1290, 1724
BlsI GCNGC 8 cut(s) 484, 713, 748, 793, 889, 897, 1291, 1725
Bme1390I CCNGG 2 cut(s) 1583, 1995
Bme18I GGWCC 3 cut(s) 119, 1110, 1146
BmgT120I GGNCC 4 cut(s) 119, 1110, 1146, 1591
BmiI GGNNCC 1 cut(s) 120
BmrFI CCNGG 2 cut(s) 1583, 1995
BmsI GCATC 6 cut(s) 409, 583, 861, 1303, 1453, 1557
BpiI GAAGAC 3 cut(s) 351, 1276, 1407
BplI GAGNNNNNCTC 2 cut(s) 909, 941
BpmI CTGGAG 2 cut(s) 1200, 1739
Bpu14I TTCGAA 2 cut(s) 414, 1267
BpuMI CCSGG 1 cut(s) 1583
BsaBI GATNNNNATC 2 cut(s) 201, 378
BsaHI GRCGYC 1 cut(s) 555
BsaJI CCNNGG 3 cut(s) 339, 645, 1994
BsaXI ACNNNNNCTCC 2 cut(s) 1991, 2021
Bsc4I CCNNNNNNNGG 2 cut(s) 1588, 2037
Bse1I ACTGG 1 cut(s) 29
Bse3DI GCAATG 2 cut(s) 479, 1200
Bse8I GATNNNNATC 2 cut(s) 201, 378
BseBI CCWGG 1 cut(s) 1995
BseDI CCNNGG 3 cut(s) 339, 645, 1994
BseGI GGATG 7 cut(s) 199, 655, 1309, 1410, 1562, 1578, 2053
BseJI GATNNNNATC 2 cut(s) 201, 378
BseLI CCNNNNNNNGG 2 cut(s) 1588, 2037
BseMI GCAATG 2 cut(s) 479, 1200
BseMII CTCAG 1 cut(s) 435
BseNI ACTGG 1 cut(s) 29
BseRI GAGGAG 2 cut(s) 52, 1007
BseSI GKGCMC 2 cut(s) 1228, 1623
BseXI GCAGC 6 cut(s) 469, 733, 778, 882, 1276, 1710
BseYI CCCAGC 1 cut(s) 983
BsgI GTGCAG 2 cut(s) 732, 1027
BshFI GGCC 4 cut(s) 59, 500, 1592, 1663
BsiSI CCGG 1 cut(s) 1582
BslFI GGGAC 2 cut(s) 213, 1459
BslI CCNNNNNNNGG 2 cut(s) 1588, 2037
BsmAI GTCTC 4 cut(s) 40, 730, 863, 1889
BsmFI GGGAC 2 cut(s) 213, 1459
BsmI GAATGC 2 cut(s) 1074, 1190
BsnI GGCC 4 cut(s) 59, 500, 1592, 1663
Bsp119I TTCGAA 2 cut(s) 414, 1267
Bsp1286I GDGCHC 2 cut(s) 1228, 1623
Bsp19I CCATGG 2 cut(s) 339, 645
BspACI CCGC 6 cut(s) 231, 252, 711, 866, 888, 1247
BspANI GGCC 4 cut(s) 59, 500, 1592, 1663
BspCNI CTCAG 1 cut(s) 436
BspHI TCATGA 1 cut(s) 1056
BspLI GGNNCC 1 cut(s) 120
BspMAI CTGCAG 1 cut(s) 578
BspPI GGATC 6 cut(s) 262, 374, 1005, 1678, 1789, 1848
BspQI GCTCTTC 1 cut(s) 877
BspT104I TTCGAA 2 cut(s) 414, 1267
BsrBI CCGCTC 1 cut(s) 233
BsrDI GCAATG 2 cut(s) 479, 1200
BsrI ACTGG 1 cut(s) 29
BssECI CCNNGG 3 cut(s) 339, 645, 1994
BssNI GRCGYC 1 cut(s) 555
BssSI CACGAG 1 cut(s) 1852
BssT1I CCWWGG 2 cut(s) 339, 645
Bst2BI CACGAG 1 cut(s) 1852
Bst2UI CCWGG 1 cut(s) 1995
Bst4CI ACNGT 1 cut(s) 1297
Bst6I CTCTTC 5 cut(s) 70, 401, 877, 910, 1728
BstACI GRCGYC 1 cut(s) 555
BstBI TTCGAA 2 cut(s) 414, 1267
BstC8I GCNNGC 6 cut(s) 757, 1072, 1287, 1532, 1642, 1721
BstDEI CTNAG 6 cut(s) 320, 429, 444, 1844, 1976, 2036
BstDSI CCRYGG 2 cut(s) 339, 645
BstF5I GGATG 7 cut(s) 199, 655, 1309, 1410, 1562, 1578, 2053
BstH2I RGCGCY 1 cut(s) 668
BstHHI GCGC 1 cut(s) 667
BstMAI GTCTC 4 cut(s) 40, 730, 863, 1889
BstMWI GCNNNNNNNGC 5 cut(s) 299, 711, 752, 1071, 1211
BstNI CCWGG 1 cut(s) 1995
BstNSI RCATGY 1 cut(s) 743
BstSCI CCNGG 2 cut(s) 1581, 1993
BstSFI CTRYAG 3 cut(s) 574, 814, 1944
BstSLI GKGCMC 2 cut(s) 1228, 1623
BstV1I GCAGC 6 cut(s) 469, 733, 778, 882, 1276, 1710
BstV2I GAAGAC 3 cut(s) 351, 1276, 1407
BstX2I RGATCY 5 cut(s) 202, 1010, 1750, 1794, 1840
BstYI RGATCY 5 cut(s) 202, 1010, 1750, 1794, 1840
BsuI GTATCC 2 cut(s) 346, 1579
BsuRI GGCC 4 cut(s) 59, 500, 1592, 1663
BtgI CCRYGG 2 cut(s) 339, 645
BtsCI GGATG 7 cut(s) 199, 655, 1309, 1410, 1562, 1578, 2053
BtsI GCAGTG 1 cut(s) 684
BtsIMutI CAGTG 4 cut(s) 22, 684, 1509, 2059
Cac8I GCNNGC 6 cut(s) 757, 1072, 1287, 1532, 1642, 1721
CciI TCATGA 1 cut(s) 1056
CfoI GCGC 1 cut(s) 667
Cfr13I GGNCC 4 cut(s) 119, 1110, 1146, 1591
Csp6I GTAC 4 cut(s) 584, 768, 1393, 1513
CviQI GTAC 4 cut(s) 584, 768, 1393, 1513
DdeI CTNAG 6 cut(s) 320, 429, 444, 1844, 1976, 2036
DraI TTTAAA 3 cut(s) 489, 1653, 1788
EaeI YGGCCR 2 cut(s) 498, 1661
Eam1104I CTCTTC 5 cut(s) 70, 401, 877, 910, 1728
EarI CTCTTC 5 cut(s) 70, 401, 877, 910, 1728
EciI GGCGGA 2 cut(s) 881, 1262
Eco130I CCWWGG 2 cut(s) 339, 645
Eco32I GATATC 1 cut(s) 398
Eco47I GGWCC 3 cut(s) 119, 1110, 1146
Eco57I CTGAAG 1 cut(s) 1979
EcoO109I RGGNCCY 1 cut(s) 119
EcoRI GAATTC 1 cut(s) 978
EcoRII CCWGG 1 cut(s) 1993
EcoRV GATATC 1 cut(s) 398
EcoT14I CCWWGG 2 cut(s) 339, 645
EcoT22I ATGCAT 1 cut(s) 1572
ErhI CCWWGG 2 cut(s) 339, 645
FalI AAGNNNNNCTT 2 cut(s) 1358, 1390
FaqI GGGAC 2 cut(s) 213, 1459
FauI CCCGC 1 cut(s) 238
FblI GTMKAC 2 cut(s) 699, 1195
Fnu4HI GCNGC 8 cut(s) 483, 712, 747, 792, 888, 896, 1290, 1724
FokI GGATG 7 cut(s) 206, 662, 1316, 1397, 1565, 1569, 2060
Fsp4HI GCNGC 8 cut(s) 483, 712, 747, 792, 888, 896, 1290, 1724
FspBI CTAG 3 cut(s) 891, 1274, 1527
GlaI GCGC 1 cut(s) 666
GluI GCNGC 8 cut(s) 483, 712, 747, 792, 888, 896, 1290, 1724
GsaI CCCAGC 1 cut(s) 987
GsuI CTGGAG 2 cut(s) 1200, 1739
HaeII RGCGCY 1 cut(s) 668
HaeIII GGCC 4 cut(s) 59, 500, 1592, 1663
HapII CCGG 1 cut(s) 1582
HhaI GCGC 1 cut(s) 667
Hin1I GRCGYC 1 cut(s) 555
Hin6I GCGC 1 cut(s) 665
HinP1I GCGC 1 cut(s) 665
HincII GTYRAC 2 cut(s) 553, 969
HindII GTYRAC 2 cut(s) 553, 969
HindIII AAGCTT 2 cut(s) 1902, 1964
HinfI GANTC 8 cut(s) 455, 535, 566, 602, 1103, 1361, 1499, 1523
HpaII CCGG 1 cut(s) 1582
HphI GGTGA 3 cut(s) 478, 745, 1018
Hpy166II GTNNAC 4 cut(s) 553, 700, 969, 1196
Hpy188I TCNGA 9 cut(s) 402, 445, 460, 1096, 1232, 1821, 2021, 2028, 2084
Hpy8I GTNNAC 4 cut(s) 553, 700, 969, 1196
Hpy99I CGWCG 1 cut(s) 87
HpyAV CCTTC 6 cut(s) 457, 655, 1032, 1165, 1327, 1535
HpyCH4III ACNGT 1 cut(s) 1297
HpyCH4IV ACGT 3 cut(s) 156, 185, 555
HpyF10VI GCNNNNNNNGC 5 cut(s) 299, 711, 752, 1071, 1211
HpyF3I CTNAG 6 cut(s) 320, 429, 444, 1844, 1976, 2036
HpySE526I ACGT 3 cut(s) 156, 185, 555
Hsp92I GRCGYC 1 cut(s) 555
HspAI GCGC 1 cut(s) 665
LguI GCTCTTC 1 cut(s) 877
LmnI GCTCC 1 cut(s) 994
Lsp1109I GCAGC 6 cut(s) 469, 733, 778, 882, 1276, 1710
LweI GCATC 6 cut(s) 409, 583, 861, 1303, 1453, 1557
MaeI CTAG 3 cut(s) 891, 1274, 1527
MaeII ACGT 3 cut(s) 156, 185, 555
MbiI CCGCTC 1 cut(s) 233
MfeI CAATTG 1 cut(s) 597
MflI RGATCY 5 cut(s) 202, 1010, 1750, 1794, 1840
MhlI GDGCHC 2 cut(s) 1228, 1623
MlsI TGGCCA 2 cut(s) 500, 1663
MluNI TGGCCA 2 cut(s) 500, 1663
MlyI GAGTC 1 cut(s) 529
MmeI TCCRAC 2 cut(s) 697, 1438
Mox20I TGGCCA 2 cut(s) 500, 1663
Mph1103I ATGCAT 1 cut(s) 1572
MroXI GAANNNNTTC 1 cut(s) 410
MscI TGGCCA 2 cut(s) 500, 1663
Msp20I TGGCCA 2 cut(s) 500, 1663
MspA1I CMGCKG 1 cut(s) 252
MspI CCGG 1 cut(s) 1582
MspR9I CCNGG 2 cut(s) 1583, 1995
MunI CAATTG 1 cut(s) 597
Mva1269I GAATGC 2 cut(s) 1074, 1190
MvaI CCWGG 1 cut(s) 1995
MwoI GCNNNNNNNGC 5 cut(s) 299, 711, 752, 1071, 1211
NciI CCSGG 1 cut(s) 1583
NcoI CCATGG 2 cut(s) 339, 645
NlaIV GGNNCC 1 cut(s) 120
NsiI ATGCAT 1 cut(s) 1572
NspI RCATGY 1 cut(s) 743
NspV TTCGAA 2 cut(s) 414, 1267
PagI TCATGA 1 cut(s) 1056
PciI ACATGT 1 cut(s) 739
PciSI GCTCTTC 1 cut(s) 877
PcsI WCGNNNNNNNCGW 1 cut(s) 153
PctI GAATGC 2 cut(s) 1074, 1190
PdmI GAANNNNTTC 1 cut(s) 410
PfeI GAWTC 7 cut(s) 455, 566, 602, 1103, 1361, 1499, 1523
PfoI TCCNGGA 1 cut(s) 1581
PkrI GCNGC 8 cut(s) 484, 713, 748, 793, 889, 897, 1291, 1725
PleI GAGTC 1 cut(s) 529
PpsI GAGTC 1 cut(s) 529
PpuMI RGGWCCY 1 cut(s) 119
PscI ACATGT 1 cut(s) 739
PsiI TTATAA 1 cut(s) 531
Psp1406I AACGTT 1 cut(s) 185
Psp5II RGGWCCY 1 cut(s) 119
Psp6I CCWGG 1 cut(s) 1993
PspFI CCCAGC 1 cut(s) 983
PspGI CCWGG 1 cut(s) 1993
PspN4I GGNNCC 1 cut(s) 120
PspPI GGNCC 4 cut(s) 119, 1110, 1146, 1591
PspPPI RGGWCCY 1 cut(s) 119
PstI CTGCAG 1 cut(s) 578
PsuI RGATCY 5 cut(s) 202, 1010, 1750, 1794, 1840
RsaI GTAC 4 cut(s) 585, 769, 1394, 1514
RsaNI GTAC 4 cut(s) 584, 768, 1393, 1513
SapI GCTCTTC 1 cut(s) 877
SatI GCNGC 8 cut(s) 483, 712, 747, 792, 888, 896, 1290, 1724
Sau96I GGNCC 4 cut(s) 119, 1110, 1146, 1591
SchI GAGTC 1 cut(s) 529
ScrFI CCNGG 2 cut(s) 1583, 1995
SduI GDGCHC 2 cut(s) 1228, 1623
SfaNI GCATC 6 cut(s) 409, 583, 861, 1303, 1453, 1557
SfcI CTRYAG 3 cut(s) 574, 814, 1944
SfuI TTCGAA 2 cut(s) 414, 1267
SinI GGWCC 3 cut(s) 119, 1110, 1146
SmiI ATTTAAAT 1 cut(s) 1788
SsiI CCGC 6 cut(s) 231, 252, 711, 866, 888, 1247
SspI AATATT 1 cut(s) 1600
SspMI CTAG 3 cut(s) 891, 1274, 1527
StyD4I CCNGG 2 cut(s) 1581, 1993
StyI CCWWGG 2 cut(s) 339, 645
SwaI ATTTAAAT 1 cut(s) 1788
TaaI ACNGT 1 cut(s) 1297
TaiI ACGT 3 cut(s) 159, 188, 558
TaqI TCGA 7 cut(s) 147, 160, 199, 414, 1267, 1476, 2009
TauI GCSGC 2 cut(s) 714, 890
TfiI GAWTC 7 cut(s) 455, 566, 602, 1103, 1361, 1499, 1523
TscAI CASTG 4 cut(s) 29, 691, 1509, 2059
TseI GCWGC 6 cut(s) 482, 746, 791, 895, 1289, 1723
TspDTI ATGAA 7 cut(s) 178, 450, 468, 642, 1073, 1746, 1839
TspGWI ACGGA 1 cut(s) 1048
TspRI CASTG 4 cut(s) 29, 691, 1509, 2059
VpaK11BI GGWCC 3 cut(s) 119, 1110, 1146
XapI RAATTY 4 cut(s) 354, 978, 1713, 1971
XceI RCATGY 1 cut(s) 743
XmiI GTMKAC 2 cut(s) 699, 1195
XmnI GAANNNNTTC 1 cut(s) 410
XspI CTAG 3 cut(s) 891, 1274, 1527
ZraI GACGTC 1 cut(s) 556
Zsp2I ATGCAT 1 cut(s) 1572
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.