FvH4_3g45711

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000379
Physical Location & Seq
Forward (+)
37915337 .. 37922549
7213 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g45711.t4

Sequence Viewer

Length: 1977 bp
ATGGCCTCCTCCTCTTCATCATCGTCAACTCGCAGCTGGAAGTATGATGTCTTTTTGAGTTTCAGGGGTCCTGACACTCGCAAAGGGATTGCAAATGAGATCTGCAATCGACTTCGTAGAAGTGGCATTATAACGTTCATGGATGAGCATGGACTTCAAGTAGGGGATGTTATTTCTCCCACACTCATACAGGCAATTAAAGAGTCAAGGTTTGCAATCGTAATTTTCTCGCAAAATTACGCTTCTTCTGCTTGGTGTTTGGAGGAACTTCGAGAGATTTGTCTATCCATGGAAGACAACAAAATTTTGCCACTTTTTTTTGAAGTTGATCCTACTGATGTTCGATATCAGAAGAGGAGTTTCAAAGAAGCTTTCTCTAAGCACAATACCTCTGGGCGACATGAATCAGAGAAGGTGGAGCAATGGAGAGCTGCTCTAGAAAAAGTGGCCAATATCTCAGGGTGGAACACAAATGATTTCAAGACTCACGAAGAACTTGTTGACAACATTGTGGAATCTCTCCGCAGTAAAGTACCACCTGATGCAATTGAATTCACAGATGATTTCCAAGCATTTGGAGCAACAAAAGTAGCGACAGACAAGGTTATGAAGGCGCTAATAGATGACAAGATTACTGCCGTTGGTGTCTATGGCATGGGCGGCGTTGGAAAGACAAGCATGGTGAGACATGTAGCTGCACAAGCCTGCAGAAATGGTACTTTTAACCATTGGATCATGGCTGTCGTATCCCAAAACCTTGACTTGAAAAAAATTCAAGACACATTGGCAGATCTGCTGGGCTTCGAATTAAAAGAGAAGACAGAAGCTGGAAGTGCAGATAAGTTGCGTAAGGAGATCATGAGAAAAGAAAAACTCCTGATAATTGTGGACGATGTTTGGGAGAGAACAGAGTTGTCAAAGATAGGGATTCCCACCTACAATGAGCTTCAAAAGTTCAAGTCCAAAGTGCTACTCACCACCAGGAGATTGAATGTCTGTAATGCCATGAAGTGCCATGAAAAGATCAGCCTCAAAGTTCTCTCAGATCAAGATTCTTGGACCTTGTTCGTGAGAAATGCAGGAACAATATCTTTTGAGCCCACCTCATTTGAGAAAGTGGCAAGGAGGGTAGCTTTAGAGTGTAAGGGTCTACCGATTGCATTGATAGCTGTTGCAAGGGCACTCGCAGATGAGGACCAGGAGGAATGGGAGAAGGCAGCTGAACGACTAGAGCAGTCGCAATATGTCAATCCTAACCATGAGGAAGATGCATTCCAATGTGTAAGATTAAGCTATAATTACTTGAAAGATGGGGATTCCAAGTCATGCTTCTTGCTCTGTTGCCTGTTCCCAGAAGACCATAACATCAAAATAGAAGACTTGTTCCGGTACGCGATCGGAAAAAGATTGTTTCGAGATGCCCAAACAGTGGAAGTAGCCAGAGGAAAATTAGTTACAGTGGTCAAGTACCTGAAAAATTCTAGCTTGCTTTTGGATAGTAAGAAAGAAGGATGTGTTAAGATGCATGATGTCATCCGAGATACAGCCCTGAATATTGCACAATCTGAAGAGGGGCATCGGTTTTTTGTGAAAGCTGGCTGTGGTTTAAAGGGTTGGCTGCCACGCGGATTACATGAAGGCTGCACTGCTATTTCACTGATGTGGAACGAAATTCGCAATCTACCCGAAGAAGAGTTGGTATGTCCAAATCTCCAGATTTTATTAATAAACGGGAACAAGGAACTAAGTGAGATCCCAGAAAAGTTGATCCAGAATCTGAAAGAGTTAAGGGTCTTGGATCTTAGTTACACTAGTATATCCGTATTACCCCAATCATTTAGTCTCCTCACCAACCTCCAAGCTTTGTATTTAGATGATTGCGGCAAATTAATTGACATTTCTGTTGTGGGGAAACTTAACAAGCTTGAAATTCTTAGTATGAGAGACTGTCCTGGGGGAAATTGTCGAGAGAAATAG

Protein Analysis

659

Amino Acids

74.46

Weight (kDa)

6.51

Isoelectric Point (pI)

43.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 14 - 177 8.9e-45 TIR domain
TIR_2 PF13676 17 - 112 1.4e-15 TIR domain
NB-ARC PF00931 199 - 360 4.6e-31 NB-ARC domain
LRR_8 PF13855 569 - 627 4e-11 Leucine rich repeat
LRR_14 PF23598 579 - 649 2.6e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000379)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17740 FvH4_1g17740 FvH4_1g17740 FvH4_1g17740 FvH4_3g42940 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43871 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43940 FvH4_3g43991 FvH4_3g44561 FvH4_3g44570 FvH4_3g44610 FvH4_3g44670 FvH4_3g44670 FvH4_3g44680 FvH4_3g44680 FvH4_3g44680 FvH4_3g45170 FvH4_3g45170 FvH4_3g45170 FvH4_3g45170 FvH4_3g45630 FvH4_3g45643 FvH4_3g45680 FvH4_3g45690 FvH4_3g45700 FvH4_3g45700 FvH4_3g45700 FvH4_3g45700 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730
malus_domestica MD11G1020200.v1.1 MD15G1398500.v1.1
rosa_chinensis RchiOBHm_Chr1g0326201 RchiOBHm_Chr5g0064091 RchiOBHm_Chr5g0076771 RchiOBHm_Chr5g0078181 RchiOBHm_Chr5g0078321 RchiOBHm_Chr5g0079331 RchiOBHm_Chr5g0079341 RchiOBHm_Chr5g0079351 RchiOBHm_Chr5g0079361 RchiOBHm_Chr5g0079441 RchiOBHm_Chr5g0079821 RchiOBHm_Chr5g0080071 RchiOBHm_Chr7g0212731 RchiOBHm_Chr7g0224201
rosa_laevigata RLG00000002871
rosa_multiflora Rmu_co8378879.1_g000001 Rmu_co8466133.1_g000001 Rmu_sc0000595.1_g000019 Rmu_sc0000616.1_g000025 Rmu_sc0000631.1_g000033 Rmu_sc0000945.1_g000004 Rmu_sc0001148.1_g000022 Rmu_sc0001226.1_g000016 Rmu_sc0002187.1_g000037 Rmu_sc0006084.1_g000005 Rmu_sc0006084.1_g000009 Rmu_sc0006084.1_g000019 Rmu_sc0006084.1_g000021
rosa_roxburghii Rroxscaffold_1G00001540 Rroxscaffold_1G00003210 Rroxscaffold_1G00003250 Rroxscaffold_1G00003340 Rroxscaffold_1G00003580 Rroxscaffold_1G00003940 Rroxscaffold_3G00228660 Rroxscaffold_3G00247850
rosa_rugosa Rorug05G0465800 Rorug05G0466100 Rorug07G0125700 Rorug07G0136300
rosa_wichuraiana Rw0G005160 Rw0G022760 Rw5G047710 Rw5G048070 Rw5G048080 Rw5G048150 Rw5G048180 Rw5G048210 Rw5G048250 Rw5G048290 Rw7G023250 Rw7G030960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 131
AccB7I CCANNNNNTGG 1 cut(s) 1429
AccI GTMKAC 1 cut(s) 1150
AccII CGCG 2 cut(s) 1394, 1626
AciI CCGC 4 cut(s) 523, 660, 1626, 1881
AclI AACGTT 1 cut(s) 134
AclWI GGATC 5 cut(s) 323, 740, 1747, 1762, 1806
AcoI YGGCCR 1 cut(s) 447
AcsI RAATTY 6 cut(s) 303, 551, 771, 1477, 1671, 1929
AcuI CTGAAG 1 cut(s) 1587
AfaI GTAC 4 cut(s) 534, 718, 1391, 1469
AfiI CCNNNNNNNGG 1 cut(s) 1429
AflIII ACRYGT 1 cut(s) 688
AhlI ACTAGT 1 cut(s) 1811
AjnI CCWGG 3 cut(s) 980, 1197, 1951
AjuI GAANNNNNNNTTGG 2 cut(s) 1313, 1345
AleI CACNNNNGTG 1 cut(s) 1660
Alw26I GTCTC 3 cut(s) 679, 1847, 1938
AlwI GGATC 5 cut(s) 323, 740, 1747, 1762, 1806
AlwNI CAGNNNCTG 2 cut(s) 827, 1777
AoxI GGCC 2 cut(s) 3, 447
ApeKI GCWGC 6 cut(s) 33, 431, 695, 1217, 1618, 1641
ApoI RAATTY 6 cut(s) 303, 551, 771, 1477, 1671, 1929
AseI ATTAAT 2 cut(s) 1724, 1889
AspLEI GCGC 1 cut(s) 616
AspS9I GGNCC 3 cut(s) 68, 1059, 1195
AsuHPI GGTGA 3 cut(s) 694, 967, 1840
AsuII TTCGAA 1 cut(s) 804
AvaII GGWCC 3 cut(s) 68, 1059, 1195
BaeGI GKGCMC 1 cut(s) 1183
BalI TGGCCA 1 cut(s) 449
BanII GRGCYC 1 cut(s) 1101
BbsI GAAGAC 4 cut(s) 300, 824, 1362, 1383
BbvI GCAGC 6 cut(s) 45, 418, 682, 1229, 1605, 1628
BccI CCATC 1 cut(s) 1304
BceAI ACGGC 1 cut(s) 623
BciT130I CCWGG 3 cut(s) 982, 1199, 1953
BciVI GTATCC 1 cut(s) 757
BcoDI GTCTC 3 cut(s) 679, 1847, 1938
BcuI ACTAGT 1 cut(s) 1811
BfaI CTAG 4 cut(s) 437, 1229, 1482, 1812
BfmI CTRYAG 1 cut(s) 706
BfoI RGCGCY 1 cut(s) 617
BfuI GTATCC 1 cut(s) 757
BglII AGATCT 2 cut(s) 99, 790
BisI GCNGC 8 cut(s) 34, 432, 661, 696, 1218, 1619, 1642, 1882
BlsI GCNGC 8 cut(s) 35, 433, 662, 697, 1219, 1620, 1643, 1883
Bme1390I CCNGG 3 cut(s) 982, 1199, 1953
Bme18I GGWCC 3 cut(s) 68, 1059, 1195
BmgT120I GGNCC 3 cut(s) 68, 1059, 1195
BmiI GGNNCC 1 cut(s) 69
BmrFI CCNGG 3 cut(s) 982, 1199, 1953
BmsI GCATC 5 cut(s) 532, 1258, 1408, 1512, 1585
BpiI GAAGAC 4 cut(s) 300, 824, 1362, 1383
BplI GAGNNNNNCTC 4 cut(s) 418, 450, 1088, 1120
BpmI CTGGAG 1 cut(s) 1697
Bpu14I TTCGAA 1 cut(s) 804
BsaJI CCNNGG 2 cut(s) 288, 1952
BsaWI WCCGGW 1 cut(s) 1386
Bsc4I CCNNNNNNNGG 1 cut(s) 1429
Bse3DI GCAATG 1 cut(s) 428
BseBI CCWGG 3 cut(s) 982, 1199, 1953
BseDI CCNNGG 2 cut(s) 288, 1952
BseGI GGATG 4 cut(s) 148, 172, 1517, 1533
BseLI CCNNNNNNNGG 1 cut(s) 1429
BseMI GCAATG 1 cut(s) 428
BseMII CTCAG 2 cut(s) 471, 1056
BseRI GAGGAG 2 cut(s) 370, 1835
BseSI GKGCMC 1 cut(s) 1183
BseXI GCAGC 6 cut(s) 45, 418, 682, 1229, 1605, 1628
BseYI CCCAGC 1 cut(s) 796
BsgI GTGCAG 3 cut(s) 681, 855, 1627
Bsh1236I CGCG 2 cut(s) 1394, 1626
Bsh1285I CGRYCG 1 cut(s) 1398
BshFI GGCC 2 cut(s) 5, 449
BsiEI CGRYCG 1 cut(s) 1398
BsiSI CCGG 1 cut(s) 1387
BslI CCNNNNNNNGG 1 cut(s) 1429
BsmAI GTCTC 3 cut(s) 679, 1847, 1938
BsmI GAATGC 1 cut(s) 1271
BsnI GGCC 2 cut(s) 5, 449
Bsp119I TTCGAA 1 cut(s) 804
Bsp1286I GDGCHC 2 cut(s) 1101, 1183
Bsp19I CCATGG 1 cut(s) 288
BspACI CCGC 4 cut(s) 523, 660, 1626, 1881
BspANI GGCC 2 cut(s) 5, 449
BspCNI CTCAG 2 cut(s) 470, 1055
BspFNI CGCG 2 cut(s) 1394, 1626
BspHI TCATGA 1 cut(s) 858
BspLI GGNNCC 1 cut(s) 69
BspMAI CTGCAG 1 cut(s) 710
BspPI GGATC 5 cut(s) 323, 740, 1747, 1762, 1806
BspT104I TTCGAA 1 cut(s) 804
BsrDI GCAATG 1 cut(s) 428
BssECI CCNNGG 2 cut(s) 288, 1952
BssT1I CCWWGG 1 cut(s) 288
Bst2UI CCWGG 3 cut(s) 982, 1199, 1953
Bst4CI ACNGT 3 cut(s) 1429, 1459, 1949
Bst6I CTCTTC 4 cut(s) 19, 347, 1563, 1686
BstBI TTCGAA 1 cut(s) 804
BstC8I GCNNGC 3 cut(s) 706, 1487, 1597
BstDEI CTNAG 6 cut(s) 378, 457, 1042, 1745, 1802, 1934
BstDSI CCRYGG 1 cut(s) 288
BstF5I GGATG 4 cut(s) 148, 172, 1517, 1533
BstFNI CGCG 2 cut(s) 1394, 1626
BstH2I RGCGCY 1 cut(s) 617
BstHHI GCGC 1 cut(s) 616
BstMAI GTCTC 3 cut(s) 679, 1847, 1938
BstMCI CGRYCG 1 cut(s) 1398
BstMWI GCNNNNNNNGC 6 cut(s) 248, 578, 660, 701, 833, 1166
BstNI CCWGG 3 cut(s) 982, 1199, 1953
BstNSI RCATGY 1 cut(s) 692
BstSCI CCNGG 3 cut(s) 980, 1197, 1951
BstSFI CTRYAG 1 cut(s) 706
BstSLI GKGCMC 1 cut(s) 1183
BstUI CGCG 2 cut(s) 1394, 1626
BstV1I GCAGC 6 cut(s) 45, 418, 682, 1229, 1605, 1628
BstV2I GAAGAC 4 cut(s) 300, 824, 1362, 1383
BstX2I RGATCY 4 cut(s) 99, 790, 1752, 1798
BstXI CCANNNNNNTGG 1 cut(s) 575
BstYI RGATCY 4 cut(s) 99, 790, 1752, 1798
BsuI GTATCC 1 cut(s) 757
BsuRI GGCC 2 cut(s) 5, 449
BtgI CCRYGG 1 cut(s) 288
BtsCI GGATG 4 cut(s) 148, 172, 1517, 1533
BtsI GCAGTG 1 cut(s) 1644
BtsIMutI CAGTG 4 cut(s) 1434, 1464, 1644, 1655
Cac8I GCNNGC 3 cut(s) 706, 1487, 1597
CaiI CAGNNNCTG 2 cut(s) 827, 1777
CciI TCATGA 1 cut(s) 858
CfoI GCGC 1 cut(s) 616
Cfr13I GGNCC 3 cut(s) 68, 1059, 1195
Csp6I GTAC 4 cut(s) 533, 717, 1390, 1468
CspCI CAANNNNNGTGG 2 cut(s) 1090, 1125
CviQI GTAC 4 cut(s) 533, 717, 1390, 1468
DdeI CTNAG 6 cut(s) 378, 457, 1042, 1745, 1802, 1934
DraI TTTAAA 1 cut(s) 1608
EaeI YGGCCR 1 cut(s) 447
Eam1104I CTCTTC 4 cut(s) 19, 347, 1563, 1686
EarI CTCTTC 4 cut(s) 19, 347, 1563, 1686
Eco130I CCWWGG 1 cut(s) 288
Eco24I GRGCYC 1 cut(s) 1101
Eco32I GATATC 1 cut(s) 347
Eco47I GGWCC 3 cut(s) 68, 1059, 1195
Eco57I CTGAAG 1 cut(s) 1587
EcoO109I RGGNCCY 1 cut(s) 68
EcoRI GAATTC 1 cut(s) 551
EcoRII CCWGG 3 cut(s) 980, 1197, 1951
EcoRV GATATC 1 cut(s) 347
EcoT14I CCWWGG 1 cut(s) 288
EcoT22I ATGCAT 2 cut(s) 1273, 1527
EcoT38I GRGCYC 1 cut(s) 1101
ErhI CCWWGG 1 cut(s) 288
FalI AAGNNNNNCTT 2 cut(s) 1313, 1345
FblI GTMKAC 1 cut(s) 1150
Fnu4HI GCNGC 8 cut(s) 34, 432, 661, 696, 1218, 1619, 1642, 1882
FokI GGATG 4 cut(s) 155, 179, 1520, 1524
FriOI GRGCYC 1 cut(s) 1101
Fsp4HI GCNGC 8 cut(s) 34, 432, 661, 696, 1218, 1619, 1642, 1882
FspBI CTAG 4 cut(s) 437, 1229, 1482, 1812
GlaI GCGC 1 cut(s) 615
GluI GCNGC 8 cut(s) 34, 432, 661, 696, 1218, 1619, 1642, 1882
GsaI CCCAGC 1 cut(s) 800
GsuI CTGGAG 1 cut(s) 1697
HaeII RGCGCY 1 cut(s) 617
HaeIII GGCC 2 cut(s) 5, 449
HapII CCGG 1 cut(s) 1387
HhaI GCGC 1 cut(s) 616
Hin6I GCGC 1 cut(s) 614
HinP1I GCGC 1 cut(s) 614
HincII GTYRAC 2 cut(s) 27, 502
HindII GTYRAC 2 cut(s) 27, 502
HindIII AAGCTT 3 cut(s) 369, 1860, 1922
HinfI GANTC 8 cut(s) 203, 404, 484, 515, 928, 1052, 1316, 1774
HpaII CCGG 1 cut(s) 1387
HphI GGTGA 3 cut(s) 694, 967, 1840
Hpy166II GTNNAC 4 cut(s) 27, 502, 889, 1151
Hpy188I TCNGA 7 cut(s) 351, 409, 1045, 1400, 1538, 1567, 1779
Hpy8I GTNNAC 4 cut(s) 27, 502, 889, 1151
HpyAV CCTTC 5 cut(s) 406, 604, 1207, 1502, 1631
HpyCH4III ACNGT 3 cut(s) 1429, 1459, 1949
HpyCH4IV ACGT 1 cut(s) 134
HpyF10VI GCNNNNNNNGC 6 cut(s) 248, 578, 660, 701, 833, 1166
HpyF3I CTNAG 6 cut(s) 378, 457, 1042, 1745, 1802, 1934
HpySE526I ACGT 1 cut(s) 134
HspAI GCGC 1 cut(s) 614
LmnI GCTCC 2 cut(s) 418, 578
Lsp1109I GCAGC 6 cut(s) 45, 418, 682, 1229, 1605, 1628
LweI GCATC 5 cut(s) 532, 1258, 1408, 1512, 1585
MaeI CTAG 4 cut(s) 437, 1229, 1482, 1812
MaeII ACGT 1 cut(s) 134
MaeIII GTNAC 2 cut(s) 1453, 1805
MfeI CAATTG 1 cut(s) 546
MflI RGATCY 4 cut(s) 99, 790, 1752, 1798
MhlI GDGCHC 2 cut(s) 1101, 1183
MlsI TGGCCA 1 cut(s) 449
MluNI TGGCCA 1 cut(s) 449
MlyI GAGTC 2 cut(s) 212, 478
MmeI TCCRAC 1 cut(s) 646
Mox20I TGGCCA 1 cut(s) 449
Mph1103I ATGCAT 2 cut(s) 1273, 1527
MscI TGGCCA 1 cut(s) 449
MslI CAYNNNNRTG 2 cut(s) 1276, 1660
Msp20I TGGCCA 1 cut(s) 449
MspA1I CMGCKG 2 cut(s) 36, 1220
MspI CCGG 1 cut(s) 1387
MspR9I CCNGG 3 cut(s) 982, 1199, 1953
MunI CAATTG 1 cut(s) 546
Mva1269I GAATGC 1 cut(s) 1271
MvaI CCWGG 3 cut(s) 982, 1199, 1953
MvnI CGCG 2 cut(s) 1394, 1626
MwoI GCNNNNNNNGC 6 cut(s) 248, 578, 660, 701, 833, 1166
NcoI CCATGG 1 cut(s) 288
NlaIV GGNNCC 1 cut(s) 69
NsiI ATGCAT 2 cut(s) 1273, 1527
NspI RCATGY 1 cut(s) 692
NspV TTCGAA 1 cut(s) 804
OliI CACNNNNGTG 1 cut(s) 1660
PagI TCATGA 1 cut(s) 858
PciI ACATGT 1 cut(s) 688
PctI GAATGC 1 cut(s) 1271
PfeI GAWTC 6 cut(s) 404, 515, 928, 1052, 1316, 1774
PflMI CCANNNNNTGG 1 cut(s) 1429
PkrI GCNGC 8 cut(s) 35, 433, 662, 697, 1219, 1620, 1643, 1883
Ple19I CGATCG 1 cut(s) 1398
PleI GAGTC 2 cut(s) 211, 478
PpsI GAGTC 2 cut(s) 211, 478
PpuMI RGGWCCY 1 cut(s) 68
PscI ACATGT 1 cut(s) 688
PshBI ATTAAT 2 cut(s) 1724, 1889
PsiI TTATAA 1 cut(s) 131
Psp1406I AACGTT 1 cut(s) 134
Psp5II RGGWCCY 1 cut(s) 68
Psp6I CCWGG 3 cut(s) 980, 1197, 1951
PspFI CCCAGC 1 cut(s) 796
PspGI CCWGG 3 cut(s) 980, 1197, 1951
PspN4I GGNNCC 1 cut(s) 69
PspPI GGNCC 3 cut(s) 68, 1059, 1195
PspPPI RGGWCCY 1 cut(s) 68
PstI CTGCAG 1 cut(s) 710
PstNI CAGNNNCTG 2 cut(s) 827, 1777
PsuI RGATCY 4 cut(s) 99, 790, 1752, 1798
PvuI CGATCG 1 cut(s) 1398
PvuII CAGCTG 2 cut(s) 36, 1220
RsaI GTAC 4 cut(s) 534, 718, 1391, 1469
RsaNI GTAC 4 cut(s) 533, 717, 1390, 1468
RseI CAYNNNNRTG 2 cut(s) 1276, 1660
SatI GCNGC 8 cut(s) 34, 432, 661, 696, 1218, 1619, 1642, 1882
Sau96I GGNCC 3 cut(s) 68, 1059, 1195
SchI GAGTC 2 cut(s) 212, 478
ScrFI CCNGG 3 cut(s) 982, 1199, 1953
SduI GDGCHC 2 cut(s) 1101, 1183
SfaNI GCATC 5 cut(s) 532, 1258, 1408, 1512, 1585
SfcI CTRYAG 1 cut(s) 706
SfuI TTCGAA 1 cut(s) 804
SinI GGWCC 3 cut(s) 68, 1059, 1195
SmiMI CAYNNNNRTG 2 cut(s) 1276, 1660
SpeI ACTAGT 1 cut(s) 1811
SsiI CCGC 4 cut(s) 523, 660, 1626, 1881
SspI AATATT 1 cut(s) 1555
SspMI CTAG 4 cut(s) 437, 1229, 1482, 1812
StyD4I CCNGG 3 cut(s) 980, 1197, 1951
StyI CCWWGG 1 cut(s) 288
TaaI ACNGT 3 cut(s) 1429, 1459, 1949
TaiI ACGT 1 cut(s) 137
TaqI TCGA 6 cut(s) 109, 271, 343, 804, 1414, 1966
TauI GCSGC 2 cut(s) 663, 1884
TfiI GAWTC 6 cut(s) 404, 515, 928, 1052, 1316, 1774
TscAI CASTG 4 cut(s) 1434, 1464, 1651, 1662
TseI GCWGC 6 cut(s) 33, 431, 695, 1217, 1618, 1641
TspDTI ATGAA 7 cut(s) 6, 127, 417, 623, 1022, 1032, 1650
TspGWI ACGGA 1 cut(s) 1810
TspRI CASTG 4 cut(s) 1434, 1464, 1651, 1662
Van91I CCANNNNNTGG 1 cut(s) 1429
VpaK11BI GGWCC 3 cut(s) 68, 1059, 1195
VspI ATTAAT 2 cut(s) 1724, 1889
XapI RAATTY 6 cut(s) 303, 551, 771, 1477, 1671, 1929
XbaI TCTAGA 1 cut(s) 436
XceI RCATGY 1 cut(s) 692
XmiI GTMKAC 1 cut(s) 1150
XspI CTAG 4 cut(s) 437, 1229, 1482, 1812
Zsp2I ATGCAT 2 cut(s) 1273, 1527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.