Rmu_sc0006084.1_g000021

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006084.1
OG0000379
Physical Location & Seq
Forward (+)
116427 .. 120361
3935 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006084.1_g000021.1.cds

Sequence Viewer

Length: 3453 bp
atgtcgttggcgattattgtggtaattgtgacatggatcggtgccatagctactattaagtggatatggactctactgaagcattggttcggttacatggttgaaaggcgcgagccaattggcatcgctactgagtggaagtatgatgtgtttttgagtttcaggggtcctgacactcgcaaggggattacagtcgacatacaggatcgacttaataggagtggaattaaaacgttcatggatgatcgagatcttgaagtagggaatgttattagtcccgctctcttaacagcaatcagagaatcaaagtttgcaatcgttgttctctcgcaaaattatgctttttctacttggtgtttggaggaacttagagagatttgtctctgcatggaagacaacagaattttgccacttttttatgatgttgatcctgcttatgttcgatatcagaacgggagatacggagatgctttctctaagcatgaaacctctgggcgacatgaatcaaagaaggtgaagcaatggagagctgctttaaaaaaagtggccgacatttctgggtggaatacaaatgattataagactcacaaagaacttgttgacatcattgtggaatctctctgcagtaaagtaccacctgatgcaattgaatccacaggagatttccaagcatatgaagcaacaacagaagccatgaataaggttatgaaggcgctaacagatagcgagatcagtgccgttggtgtctacggcatgggcggcgttggaaagacaagcatggcgagacatgtagctgcaaaagcctgcaaaaacggtacttttaaccgttggattatagttgccatatcccaaagccccgacttgagaaaaattcaagacacattggcagatttcttgggcgttaaattggacaaggagacagaagatggaagagcggctgcgctgcataaggagataatgagaagaggaagactcctgataatcttggacgatgtttggaacagaatagaattgtcagccataggaattcccagctacgaggagcttcaaaagtgcaattccaaagtcgtactcaccacacggagaaggaatgtctgtcatgtcatgaagtgccaagcaagcattcctctcaatatcttatcagaacaagattcttggaccttgtttctgagaaatgcagtaataaatccttttcagtccaccacatttgagaatgtggcgaggagggtagctgtagaatgtaagggtctaccgattgctttgatagctgttgcaagggcactcggagatgaggacctgggggaatgggaaaaggcagctgaactactagagcagtcgcgatgtgccaatcctaaccatgaggatgaaaatgcattcaattgtatcagattaagctatgattacttgaaaagtgaagaccgcaagtcgtgcttcttgctctgttgcctatacccagaagaccatgaaatcgaaatggaagacttgttcaggtatgcgatcggaaaaggattatttcaagatgccgaaacattggtaaaagccagaggaacagtagtttcagtggtcaagtacctgaaagattctagcttgcttttggatggcgagaaaaatggatgtgtaaagatgcatgatgtcatccgggatacagccattcaaattgcaaaatctgaagatgggcatcggtttttggtaaaagctggctgtggtttagagaattggaggccacgcggattacatgaaggctgcactgctatttcactgatgaggaacgaaattcgcaagctacccgaagaagagttggtatgtccaaatctccagattttattactaaaccggaatgctgatttagatgagatcccagaaaagtccatccaaaagctgaatgaattaaggctcttggatcttagcgacactagtatttccgtgttaccgcagtcattcagtctcctgaccaacctccaagctttgtatttagattctcccaagaaatttattgacatttctatagtgggaaaactgaagcttgaaattcttagtatgagagaatgtcccgggagcgggggattgtcgagatttggacatgaacatcccgagaggagggaattgtcgagagaaataggacatttgaccaatctaaggattttggatgtcaatcgctcttgggcaagagcctcggtgagtggtatggtcacaattccatctaaagtgatatcaaagttgcataaattagaagaattgtacatggtgtactgtggattagaagaagaaaccaatatttttgatgagttagctggtttatcaaatttgaaaatagtgcaggttggcatatctgatgcaaaatacatccctaaaaatgttgaggccaaaccagattgggattacttttatataagtatcatcggcggacgcaactccggtgcatacagaagcggagatcataattcaagatccttgtatcttagagaagcaaccataagtgccttgcctgattggtttatcaacgcggtgacaaagaaaacggagacgctagagtatgattgctgcaaagggatgagtgacattcttatagaatatgaccatgggatgttacataaactcaagcatctcacagtagctggtcaaattcttcattcctatgtgtacttgaaagagttgatgaacacaacaagacgagttcaaaaaggaccagtgtttgagaatttggaagagttgcgtctgttagcactgatccaccttgaggagttgtgtgttggtgatttaccacttgggtctttctccaatctgaagagattgcatatgtttggttgtttaatcttgaagaatgtatcaaaattggtacaaagactaccaaatctggagaaactagatctaaattggatgcctaaattggaatatgtgtttggatgggaagggtttgagctgaaacaatcaaaactgagagagatgcatttgttgggtccaaattcagtgaagagcatttgtagaggtcctgcctcacgcataatgtttcagagtcttaaaagtttgttcttttaccgttgcgagttgctgcaaagtctgttcgcgtgtgatgtagccgagtgtcttgttcaattggaagacctttttgtagagcggtgctatttgttgaaaagagtaattgaagcagtgaacaacgagaagacggttctaccaaaattgaagaacctggttttgaagaatcttcctatgttgtatggtgcaagtgctactgttgatattgagtgtccttcactggagcacttgattgtggtggattgcccccagtttccattttcaacttcttccgatctcttcgaatccttcaaaagcaggaaccatatttcattttcaacccctgcttctgactactttggcagcacgaacccagtcaaactcaatgatcgacaactgtacagcttcctatatgatagaacttctggtttccaattgtga

Protein Analysis

1150

Amino Acids

130.64

Weight (kDa)

6.48

Isoelectric Point (pI)

45.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000379)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17740 FvH4_1g17740 FvH4_1g17740 FvH4_1g17740 FvH4_3g42940 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43871 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43940 FvH4_3g43991 FvH4_3g44561 FvH4_3g44570 FvH4_3g44610 FvH4_3g44670 FvH4_3g44670 FvH4_3g44680 FvH4_3g44680 FvH4_3g44680 FvH4_3g45170 FvH4_3g45170 FvH4_3g45170 FvH4_3g45170 FvH4_3g45630 FvH4_3g45643 FvH4_3g45680 FvH4_3g45690 FvH4_3g45700 FvH4_3g45700 FvH4_3g45700 FvH4_3g45700 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730
malus_domestica MD11G1020200.v1.1 MD15G1398500.v1.1
rosa_chinensis RchiOBHm_Chr1g0326201 RchiOBHm_Chr5g0064091 RchiOBHm_Chr5g0076771 RchiOBHm_Chr5g0078181 RchiOBHm_Chr5g0078321 RchiOBHm_Chr5g0079331 RchiOBHm_Chr5g0079341 RchiOBHm_Chr5g0079351 RchiOBHm_Chr5g0079361 RchiOBHm_Chr5g0079441 RchiOBHm_Chr5g0079821 RchiOBHm_Chr5g0080071 RchiOBHm_Chr7g0212731 RchiOBHm_Chr7g0224201
rosa_laevigata RLG00000002871
rosa_multiflora Rmu_co8378879.1_g000001 Rmu_co8466133.1_g000001 Rmu_sc0000595.1_g000019 Rmu_sc0000616.1_g000025 Rmu_sc0000631.1_g000033 Rmu_sc0000945.1_g000004 Rmu_sc0001148.1_g000022 Rmu_sc0001226.1_g000016 Rmu_sc0002187.1_g000037 Rmu_sc0006084.1_g000005 Rmu_sc0006084.1_g000009 Rmu_sc0006084.1_g000019 Rmu_sc0006084.1_g000021
rosa_roxburghii Rroxscaffold_1G00001540 Rroxscaffold_1G00003210 Rroxscaffold_1G00003250 Rroxscaffold_1G00003340 Rroxscaffold_1G00003580 Rroxscaffold_1G00003940 Rroxscaffold_3G00228660 Rroxscaffold_3G00247850
rosa_rugosa Rorug05G0465800 Rorug05G0466100 Rorug07G0125700 Rorug07G0136300
rosa_wichuraiana Rw0G005160 Rw0G022760 Rw5G047710 Rw5G048070 Rw5G048080 Rw5G048150 Rw5G048180 Rw5G048210 Rw5G048250 Rw5G048290 Rw7G023250 Rw7G030960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 579
Acc36I ACCTGC 1 cut(s) 2308
AccB1I GGYRCC 1 cut(s) 41
AccBSI CCGCTC 4 cut(s) 281, 935, 2058, 3115
AccI GTMKAC 3 cut(s) 195, 747, 1249
AccII CGCG 5 cut(s) 111, 1339, 1728, 2504, 3065
AclI AACGTT 1 cut(s) 233
AclWI GGATC 7 cut(s) 44, 213, 422, 1849, 1908, 2442, 2722
AcoI YGGCCR 1 cut(s) 546
AcuI CTGAAG 4 cut(s) 98, 1689, 2039, 2804
AfaI GTAC 9 cut(s) 633, 817, 1071, 1571, 2240, 2249, 2642, 2838, 3413
AfiI CCNNNNNNNGG 5 cut(s) 2057, 2058, 2097, 2136, 2737
AflIII ACRYGT 1 cut(s) 787
AhdI GACNNNNNGTC 1 cut(s) 1423
AhlI ACTAGT 1 cut(s) 1913
AjnI CCWGG 2 cut(s) 1296, 3186
AjuI GAANNNNNNNTTGG 4 cut(s) 1107, 1139, 2883, 2915
AloI GAACNNNNNNTCC 2 cut(s) 1469, 1501
Alw21I GWGCWC 1 cut(s) 3261
Alw26I GTCTC 5 cut(s) 386, 778, 911, 1949, 2516
AlwI GGATC 7 cut(s) 44, 213, 422, 1849, 1908, 2442, 2722
AlwNI CAGNNNCTG 1 cut(s) 2615
Ama87I CYCGRG 2 cut(s) 2051, 2090
AoxI GGCC 3 cut(s) 546, 1721, 2361
ApeKI GCWGC 9 cut(s) 530, 794, 938, 943, 1316, 1743, 2541, 3049, 3375
AspLEI GCGC 3 cut(s) 111, 715, 943
AspS9I GGNCC 6 cut(s) 167, 1158, 1294, 2684, 2957, 2987
AsuC2I CCSGG 3 cut(s) 1640, 2052, 2053
AsuHPI GGTGA 5 cut(s) 526, 1066, 2188, 2518, 2765
AsuII TTCGAA 1 cut(s) 3315
AvaI CYCGRG 2 cut(s) 2051, 2090
AvaII GGWCC 6 cut(s) 167, 1158, 1294, 2684, 2957, 2987
BaeGI GKGCMC 1 cut(s) 1282
BanI GGYRCC 1 cut(s) 41
BbsI GAAGAC 7 cut(s) 399, 976, 1422, 1464, 1485, 3105, 3167
Bbv12I GWGCWC 1 cut(s) 3261
BbvI GCAGC 9 cut(s) 517, 781, 925, 930, 1328, 1730, 2528, 3036, 3387
BccI CCATC 6 cut(s) 920, 1592, 1667, 1877, 2206, 2898
BceAI ACGGC 2 cut(s) 722, 766
BcgI CGANNNNNNTGC 4 cut(s) 716, 750, 2154, 2188
BciT130I CCWGG 2 cut(s) 1298, 3188
BciVI GTATCC 1 cut(s) 1636
BcnI CCSGG 3 cut(s) 1640, 2052, 2053
BcoDI GTCTC 5 cut(s) 386, 778, 911, 1949, 2516
BcuI ACTAGT 1 cut(s) 1913
BfaI CTAG 5 cut(s) 1328, 1584, 1914, 2528, 2864
BfmI CTRYAG 3 cut(s) 622, 1233, 2004
BfoI RGCGCY 1 cut(s) 716
BfuAI ACCTGC 1 cut(s) 2308
BfuI GTATCC 1 cut(s) 1636
BglII AGATCT 2 cut(s) 250, 2866
Bme1390I CCNGG 5 cut(s) 1298, 1640, 2052, 2053, 3188
Bme18I GGWCC 6 cut(s) 167, 1158, 1294, 2684, 2957, 2987
BmeRI GACNNNNNGTC 1 cut(s) 1423
BmeT110I CYCGRG 2 cut(s) 2051, 2090
BmgT120I GGNCC 6 cut(s) 167, 1158, 1294, 2684, 2957, 2987
BmiI GGNNCC 4 cut(s) 43, 168, 2958, 3335
BmrFI CCNGG 5 cut(s) 1298, 1640, 2052, 2053, 3188
BmrI ACTGGG 2 cut(s) 3277, 3380
BmuI ACTGGG 2 cut(s) 3277, 3380
BpiI GAAGAC 7 cut(s) 399, 976, 1422, 1464, 1485, 3105, 3167
BplI GAGNNNNNCTC 2 cut(s) 957, 989
BpmI CTGGAG 3 cut(s) 1799, 2876, 3275
Bpu14I TTCGAA 1 cut(s) 3315
BpuEI CTTGAG 3 cut(s) 883, 2582, 2756
BpuMI CCSGG 3 cut(s) 1640, 2052, 2053
BsaBI GATNNNNATC 4 cut(s) 249, 426, 1677, 2151
BsaJI CCNNGG 4 cut(s) 1297, 2051, 2172, 2578
BsaWI WCCGGW 2 cut(s) 1833, 2414
Bsc4I CCNNNNNNNGG 5 cut(s) 2057, 2058, 2097, 2136, 2737
Bse1I ACTGG 4 cut(s) 2687, 3258, 3283, 3386
Bse3DI GCAATG 1 cut(s) 527
Bse8I GATNNNNATC 4 cut(s) 249, 426, 1677, 2151
BseBI CCWGG 2 cut(s) 1298, 3188
BseDI CCNNGG 4 cut(s) 1297, 2051, 2172, 2578
BseJI GATNNNNATC 4 cut(s) 249, 426, 1677, 2151
BseLI CCNNNNNNNGG 5 cut(s) 2057, 2058, 2097, 2136, 2737
BseMI GCAATG 1 cut(s) 527
BseMII CTCAG 3 cut(s) 123, 1160, 2927
BseNI ACTGG 4 cut(s) 2687, 3258, 3283, 3386
BseRI GAGGAG 4 cut(s) 1055, 1237, 2110, 2753
BseSI GKGCMC 1 cut(s) 1282
BseXI GCAGC 9 cut(s) 517, 781, 925, 930, 1328, 1730, 2528, 3036, 3387
BseYI CCCAGC 1 cut(s) 1031
BsgI GTGCAG 2 cut(s) 1729, 2336
Bsh1236I CGCG 5 cut(s) 111, 1339, 1728, 2504, 3065
Bsh1285I CGRYCG 1 cut(s) 1500
BshFI GGCC 3 cut(s) 548, 1723, 2363
BshNI GGYRCC 1 cut(s) 41
BsiEI CGRYCG 1 cut(s) 1500
BsiHKAI GWGCWC 1 cut(s) 3261
BsiHKCI CYCGRG 2 cut(s) 2051, 2090
BsiSI CCGG 4 cut(s) 1639, 1834, 2052, 2415
BslFI GGGAC 2 cut(s) 261, 2034
BslI CCNNNNNNNGG 5 cut(s) 2057, 2058, 2097, 2136, 2737
BsmAI GTCTC 5 cut(s) 386, 778, 911, 1949, 2516
BsmBI CGTCTC 1 cut(s) 2516
BsmFI GGGAC 2 cut(s) 261, 2034
BsmI GAATGC 3 cut(s) 1122, 1373, 1843
BsnI GGCC 3 cut(s) 548, 1723, 2363
BsoBI CYCGRG 2 cut(s) 2051, 2090
Bsp119I TTCGAA 1 cut(s) 3315
Bsp1286I GDGCHC 2 cut(s) 1282, 3261
Bsp1407I TGTACA 2 cut(s) 2238, 3411
Bsp19I CCATGG 1 cut(s) 2578
Bsp68I TCGCGA 1 cut(s) 1339
BspANI GGCC 3 cut(s) 548, 1723, 2363
BspCNI CTCAG 3 cut(s) 124, 1161, 2928
BspFNI CGCG 5 cut(s) 111, 1339, 1728, 2504, 3065
BspHI TCATGA 1 cut(s) 1104
BspLI GGNNCC 4 cut(s) 43, 168, 2958, 3335
BspMAI CTGCAG 1 cut(s) 626
BspMI ACCTGC 1 cut(s) 2308
BspPI GGATC 7 cut(s) 44, 213, 422, 1849, 1908, 2442, 2722
BspQI GCTCTTC 2 cut(s) 925, 2966
BspT104I TTCGAA 1 cut(s) 3315
BspT107I GGYRCC 1 cut(s) 41
BsrBI CCGCTC 4 cut(s) 281, 935, 2058, 3115
BsrDI GCAATG 1 cut(s) 527
BsrGI TGTACA 2 cut(s) 2238, 3411
BsrI ACTGG 4 cut(s) 2687, 3258, 3283, 3386
BssECI CCNNGG 4 cut(s) 1297, 2051, 2172, 2578
BssT1I CCWWGG 1 cut(s) 2578
Bst2UI CCWGG 2 cut(s) 1298, 3188
Bst6I CTCTTC 7 cut(s) 925, 958, 1788, 2700, 2780, 2966, 3317
BstAPI GCANNNNNTGC 1 cut(s) 1428
BstAUI TGTACA 2 cut(s) 2238, 3411
BstBI TTCGAA 1 cut(s) 3315
BstC8I GCNNGC 6 cut(s) 113, 805, 1120, 1589, 1699, 1781
BstDEI CTNAG 9 cut(s) 132, 368, 477, 1169, 1904, 2033, 2135, 2459, 2936
BstDSI CCRYGG 1 cut(s) 2578
BstFNI CGCG 5 cut(s) 111, 1339, 1728, 2504, 3065
BstH2I RGCGCY 1 cut(s) 716
BstHHI GCGC 3 cut(s) 111, 715, 943
BstMAI GTCTC 5 cut(s) 386, 778, 911, 1949, 2516
BstMCI CGRYCG 1 cut(s) 1500
BstMWI GCNNNNNNNGC 6 cut(s) 677, 759, 800, 1119, 1265, 1428
BstNI CCWGG 2 cut(s) 1298, 3188
BstNSI RCATGY 1 cut(s) 791
BstSCI CCNGG 5 cut(s) 1296, 1638, 2050, 2051, 3186
BstSFI CTRYAG 3 cut(s) 622, 1233, 2004
BstSLI GKGCMC 1 cut(s) 1282
BstUI CGCG 5 cut(s) 111, 1339, 1728, 2504, 3065
BstV1I GCAGC 9 cut(s) 517, 781, 925, 930, 1328, 1730, 2528, 3036, 3387
BstV2I GAAGAC 7 cut(s) 399, 976, 1422, 1464, 1485, 3105, 3167
BstX2I RGATCY 5 cut(s) 250, 1854, 1900, 2447, 2866
BstYI RGATCY 5 cut(s) 250, 1854, 1900, 2447, 2866
BsuI GTATCC 1 cut(s) 1636
BsuRI GGCC 3 cut(s) 548, 1723, 2363
BtgI CCRYGG 1 cut(s) 2578
BtgZI GCGATG 2 cut(s) 109, 1354
BtsI GCAGTG 2 cut(s) 1746, 3153
BtsIMutI CAGTG 9 cut(s) 739, 1566, 1746, 1757, 2694, 2723, 2973, 3153, 3251
BtuMI TCGCGA 1 cut(s) 1339
BveI ACCTGC 1 cut(s) 2308
Cac8I GCNNGC 6 cut(s) 113, 805, 1120, 1589, 1699, 1781
CaiI CAGNNNCTG 1 cut(s) 2615
CciI TCATGA 1 cut(s) 1104
CfoI GCGC 3 cut(s) 111, 715, 943
Cfr13I GGNCC 6 cut(s) 167, 1158, 1294, 2684, 2957, 2987
Cfr9I CCCGGG 1 cut(s) 2051
CseI GACGC 3 cut(s) 2415, 2533, 2702
CsiI ACCWGGT 1 cut(s) 3186
Csp6I GTAC 9 cut(s) 632, 816, 1070, 1570, 2239, 2248, 2641, 2837, 3412
CspCI CAANNNNNGTGG 2 cut(s) 1189, 1224
CviQI GTAC 9 cut(s) 632, 816, 1070, 1570, 2239, 2248, 2641, 2837, 3412
DdeI CTNAG 9 cut(s) 132, 368, 477, 1169, 1904, 2033, 2135, 2459, 2936
DraI TTTAAA 1 cut(s) 537
DriI GACNNNNNGTC 1 cut(s) 1423
EaeI YGGCCR 1 cut(s) 546
Eam1104I CTCTTC 7 cut(s) 925, 958, 1788, 2700, 2780, 2966, 3317
Eam1105I GACNNNNNGTC 1 cut(s) 1423
EarI CTCTTC 7 cut(s) 925, 958, 1788, 2700, 2780, 2966, 3317
EciI GGCGGA 1 cut(s) 2418
Eco130I CCWWGG 1 cut(s) 2578
Eco32I GATATC 2 cut(s) 446, 2211
Eco47I GGWCC 6 cut(s) 167, 1158, 1294, 2684, 2957, 2987
Eco57I CTGAAG 4 cut(s) 98, 1689, 2039, 2804
Eco88I CYCGRG 2 cut(s) 2051, 2090
EcoO109I RGGNCCY 3 cut(s) 167, 1294, 2987
EcoRI GAATTC 1 cut(s) 1026
EcoRII CCWGG 2 cut(s) 1296, 3186
EcoRV GATATC 2 cut(s) 446, 2211
EcoT14I CCWWGG 1 cut(s) 2578
EcoT22I ATGCAT 3 cut(s) 1375, 1629, 2949
ErhI CCWWGG 1 cut(s) 2578
Esp3I CGTCTC 1 cut(s) 2516
FalI AAGNNNNNCTT 2 cut(s) 1415, 1447
FaqI GGGAC 2 cut(s) 261, 2034
FauI CCCGC 2 cut(s) 286, 2051
FauNDI CATATG 2 cut(s) 673, 2796
FblI GTMKAC 3 cut(s) 195, 747, 1249
FspBI CTAG 5 cut(s) 1328, 1584, 1914, 2528, 2864
GlaI GCGC 3 cut(s) 110, 714, 942
GsaI CCCAGC 1 cut(s) 1035
GsuI CTGGAG 3 cut(s) 1799, 2876, 3275
HaeII RGCGCY 1 cut(s) 716
HaeIII GGCC 3 cut(s) 548, 1723, 2363
HapII CCGG 4 cut(s) 1639, 1834, 2052, 2415
HgaI GACGC 3 cut(s) 2415, 2533, 2702
HhaI GCGC 3 cut(s) 111, 715, 943
Hin6I GCGC 3 cut(s) 109, 713, 941
HinP1I GCGC 3 cut(s) 109, 713, 941
HincII GTYRAC 2 cut(s) 196, 601
HindII GTYRAC 2 cut(s) 196, 601
HindIII AAGCTT 2 cut(s) 1962, 2021
HpaII CCGG 4 cut(s) 1639, 1834, 2052, 2415
HphI GGTGA 5 cut(s) 526, 1066, 2188, 2518, 2765
Hpy166II GTNNAC 8 cut(s) 196, 601, 748, 1200, 1250, 2248, 2641, 3151
Hpy8I GTNNAC 8 cut(s) 196, 601, 748, 1200, 1250, 2248, 2641, 3151
HpyAV CCTTC 7 cut(s) 505, 703, 1080, 1733, 2903, 3258, 3331
HpyCH4IV ACGT 1 cut(s) 233
HpyF10VI GCNNNNNNNGC 6 cut(s) 677, 759, 800, 1119, 1265, 1428
HpyF3I CTNAG 9 cut(s) 132, 368, 477, 1169, 1904, 2033, 2135, 2459, 2936
HpySE526I ACGT 1 cut(s) 233
HspAI GCGC 3 cut(s) 109, 713, 941
LguI GCTCTTC 2 cut(s) 925, 2966
LmnI GCTCC 3 cut(s) 1042, 2055, 3256
Lsp1109I GCAGC 9 cut(s) 517, 781, 925, 930, 1328, 1730, 2528, 3036, 3387
MabI ACCWGGT 1 cut(s) 3186
MaeI CTAG 5 cut(s) 1328, 1584, 1914, 2528, 2864
MaeII ACGT 1 cut(s) 233
MaeIII GTNAC 7 cut(s) 28, 92, 1926, 2188, 2506, 2555, 2586
MbiI CCGCTC 4 cut(s) 281, 935, 2058, 3115
MfeI CAATTG 5 cut(s) 117, 645, 1378, 3092, 3446
MflI RGATCY 5 cut(s) 250, 1854, 1900, 2447, 2866
MhlI GDGCHC 2 cut(s) 1282, 3261
MlyI GAGTC 4 cut(s) 64, 577, 966, 3022
MmeI TCCRAC 2 cut(s) 745, 809
Mph1103I ATGCAT 3 cut(s) 1375, 1629, 2949
MslI CAYNNNNRTG 3 cut(s) 608, 1362, 2634
MspA1I CMGCKG 1 cut(s) 1319
MspI CCGG 4 cut(s) 1639, 1834, 2052, 2415
MspR9I CCNGG 5 cut(s) 1298, 1640, 2052, 2053, 3188
MunI CAATTG 5 cut(s) 117, 645, 1378, 3092, 3446
Mva1269I GAATGC 3 cut(s) 1122, 1373, 1843
MvaI CCWGG 2 cut(s) 1298, 3188
MvnI CGCG 5 cut(s) 111, 1339, 1728, 2504, 3065
MwoI GCNNNNNNNGC 6 cut(s) 677, 759, 800, 1119, 1265, 1428
NciI CCSGG 3 cut(s) 1640, 2052, 2053
NcoI CCATGG 1 cut(s) 2578
NdeI CATATG 2 cut(s) 673, 2796
NlaIV GGNNCC 4 cut(s) 43, 168, 2958, 3335
NmeAIII GCCGAG 1 cut(s) 3103
NmuCI GTSAC 4 cut(s) 28, 2188, 2506, 2555
NruI TCGCGA 1 cut(s) 1339
NsiI ATGCAT 3 cut(s) 1375, 1629, 2949
NspI RCATGY 1 cut(s) 791
NspV TTCGAA 1 cut(s) 3315
PagI TCATGA 1 cut(s) 1104
PciI ACATGT 1 cut(s) 787
PciSI GCTCTTC 2 cut(s) 925, 2966
PctI GAATGC 3 cut(s) 1122, 1373, 1843
PfeI GAWTC 9 cut(s) 302, 503, 614, 650, 1151, 1580, 1976, 3199, 3317
PfoI TCCNGGA 1 cut(s) 1638
Ple19I CGATCG 1 cut(s) 1500
PleI GAGTC 4 cut(s) 64, 577, 966, 3021
PpsI GAGTC 4 cut(s) 64, 577, 966, 3021
PpuMI RGGWCCY 3 cut(s) 167, 1294, 2987
PscI ACATGT 1 cut(s) 787
PsiI TTATAA 1 cut(s) 579
Psp1406I AACGTT 1 cut(s) 233
Psp5II RGGWCCY 3 cut(s) 167, 1294, 2987
Psp6I CCWGG 2 cut(s) 1296, 3186
PspFI CCCAGC 1 cut(s) 1031
PspGI CCWGG 2 cut(s) 1296, 3186
PspN4I GGNNCC 4 cut(s) 43, 168, 2958, 3335
PspPI GGNCC 6 cut(s) 167, 1158, 1294, 2684, 2957, 2987
PspPPI RGGWCCY 3 cut(s) 167, 1294, 2987
PsrI GAACNNNNNNTAC 2 cut(s) 443, 475
PstI CTGCAG 1 cut(s) 626
PstNI CAGNNNCTG 1 cut(s) 2615
PsuI RGATCY 5 cut(s) 250, 1854, 1900, 2447, 2866
PvuI CGATCG 1 cut(s) 1500
PvuII CAGCTG 1 cut(s) 1319
RruI TCGCGA 1 cut(s) 1339
RsaI GTAC 9 cut(s) 633, 817, 1071, 1571, 2240, 2249, 2642, 2838, 3413
RsaNI GTAC 9 cut(s) 632, 816, 1070, 1570, 2239, 2248, 2641, 2837, 3412
RseI CAYNNNNRTG 3 cut(s) 608, 1362, 2634
SalI GTCGAC 1 cut(s) 194
SapI GCTCTTC 2 cut(s) 925, 2966
Sau96I GGNCC 6 cut(s) 167, 1158, 1294, 2684, 2957, 2987
SchI GAGTC 4 cut(s) 64, 577, 966, 3022
ScrFI CCNGG 5 cut(s) 1298, 1640, 2052, 2053, 3188
SduI GDGCHC 2 cut(s) 1282, 3261
SexAI ACCWGGT 1 cut(s) 3186
SfcI CTRYAG 3 cut(s) 622, 1233, 2004
SfuI TTCGAA 1 cut(s) 3315
SinI GGWCC 6 cut(s) 167, 1158, 1294, 2684, 2957, 2987
SmaI CCCGGG 1 cut(s) 2053
SmiMI CAYNNNNRTG 3 cut(s) 608, 1362, 2634
SmlI CTYRAG 3 cut(s) 862, 2597, 2735
SmoI CTYRAG 3 cut(s) 862, 2597, 2735
SpeI ACTAGT 1 cut(s) 1913
SspI AATATT 1 cut(s) 2275
SspMI CTAG 5 cut(s) 1328, 1584, 1914, 2528, 2864
StyD4I CCNGG 5 cut(s) 1296, 1638, 2050, 2051, 3186
StyI CCWWGG 1 cut(s) 2578
TaiI ACGT 1 cut(s) 236
TaqI TCGA 9 cut(s) 195, 208, 247, 442, 1470, 2069, 2108, 3315, 3403
TatI WGTACW 4 cut(s) 2238, 2247, 2640, 3411
TauI GCSGC 2 cut(s) 762, 938
TfiI GAWTC 9 cut(s) 302, 503, 614, 650, 1151, 1580, 1976, 3199, 3317
TscAI CASTG 9 cut(s) 739, 1566, 1753, 1764, 2694, 2730, 2973, 3153, 3258
TseFI GTSAC 4 cut(s) 28, 2188, 2506, 2555
TseI GCWGC 9 cut(s) 530, 794, 938, 943, 1316, 1743, 2541, 3049, 3375
Tsp45I GTSAC 4 cut(s) 28, 2188, 2506, 2555
TspGWI ACGGA 4 cut(s) 477, 1096, 1912, 2534
TspMI CCCGGG 1 cut(s) 2051
TspRI CASTG 9 cut(s) 739, 1566, 1753, 1764, 2694, 2730, 2973, 3153, 3258
VpaK11BI GGWCC 6 cut(s) 167, 1158, 1294, 2684, 2957, 2987
XceI RCATGY 1 cut(s) 791
XmaI CCCGGG 1 cut(s) 2051
XmiI GTMKAC 3 cut(s) 195, 747, 1249
XspI CTAG 5 cut(s) 1328, 1584, 1914, 2528, 2864
Zsp2I ATGCAT 3 cut(s) 1375, 1629, 2949
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.