MD11G1020200.v1.1

disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000379
Physical Location & Seq
Reverse (-)
1743419 .. 1745484
2066 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1020200.v1.1.491

Sequence Viewer

Length: 1614 bp
ATGAAAGGAGACGAAGTTAAATCCGAGGTTCAAAAATGGCTCAAGGATGCTGACAAGGCCATAATCGATGCGAAAAGACTAAATAAAGAAGCCGGAGAAGACAAAACATGCCTCGGCGGCTGCTGTCCGAATTTGAAATGGCGTTACAGTTTAAGCAAGAGGGCCGTTAAGGAGGCAGAAGAAATGAACAATCTTAAAGAAGAGAAAAGGTTTGAAACAGTTTCGCTTCAAGTTCACCGACCCGTTGAGTTCGAGTCCACCATGTCAACAGGAGATTTCGAAGCATTTGAAGCAACAAGGGAGGCCATGGATGGGGTCATGAAGGCACTGAAAGACGATAACGTCACTGTCATTGCGGTCTATGGAATGGGAGGCATAGGCAAGACGACCATGGTGAAACATGTTGGCGTGCAAGCGCGTAAAGGCAAGCTCTTTGATCATGTGATTATGGCTGTCGTTTCCCAAAACCCGAACCTGGTAAAGATTCAAAAACAGCTTGCAGAAATGCTGGCCTTGAATTTGAGTGAGCAGACAGAAATAGCCAGAGCAGGTAGATTAAAGGAGAGAATAATGAGAGGGAAAAAGATCCTGATAATTTTGGACGACATTTGGAAGACAATAGATTTGTCTCTCATAGGGATCCCCGATCACTACGAGCTCCAAAACTGCAATTCCAAAGTTCTACTCACCACAAGGATATGGAATGTATGTCATGCCATGAAGAGCCAAGAAAAGATTCATCTCGATATCCTATCAGAAGAAGATTCTTGGGCCTTGTTTGTGAAGAAGGCAAACAGGTCTTTTGAATCAACCAATTTATGTGACATAGCAAGGAAGGTAGCCAGAGAATGTGGTGGTCTCCCAATTGCTTTGATTGCAGTTGCAAGAGCACTCGGAGATAAGGACTTGGAAGAATGGAGAGAAGCAGCTCGACGACTAGAGATGTCCCAAACTACCAACCTTGATGACGAGGAGGATGTGTTCAGATGTATAAAGCTGAGCTACGATTACTTGAAAGGAAATGACGCCAAGTCATTTTTCTTACTTTGCTGCTTATTCCCGGAGGACTCTGATATCCAAATCGAAGACTTGCTGAAGTATGGTTTTGGGAAAGGATTGTTTCGAGATGCCAATTCAATGCAAGATGCCAGAAGCACAGCACATTTAGTGGCCAAGTACCTTAAAGCTTGTAGCTTGGTTTTGGATGGTGAACAAGATGGATGTGTAAGAATGCATGATGTGATTCGGGACATGGCAATACGAATTGCATCATCTGGGGATGGCCAAGGATTTTTCGTAAAAGCTGGCTGCAACTTAAAGGATTGGCCAACGAATTCACTTGAAGACTACTCTGCAATCTCCCTAATGGGGAATGAAATTTGCAATCTTCCTGACGAGTTGGTATGTCCAAAACTCCAGATTTTATTACTACAGTCAAATTTTGAAGTACAGGAGATCCCAGAAGATTTTTTCAAAAGCCCAAATGCATTAAGGGTATTCGACATAAGTAGTACCGAAATTTCTTCATTACCATCATCATTTAATCTCTTAACCAAGCTCCAAACGCTGCATCTAGATCGTTGTCAGTCAATAACGGATAGAATCTGGTATTGA

Protein Analysis

538

Amino Acids

60.66

Weight (kDa)

5.61

Isoelectric Point (pI)

40.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 102 - 266 3.6e-33 NB-ARC domain
LRR_8 PF13855 470 - 529 3.9e-09 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000379)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17740 FvH4_1g17740 FvH4_1g17740 FvH4_1g17740 FvH4_3g42940 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43871 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43940 FvH4_3g43991 FvH4_3g44561 FvH4_3g44570 FvH4_3g44610 FvH4_3g44670 FvH4_3g44670 FvH4_3g44680 FvH4_3g44680 FvH4_3g44680 FvH4_3g45170 FvH4_3g45170 FvH4_3g45170 FvH4_3g45170 FvH4_3g45630 FvH4_3g45643 FvH4_3g45680 FvH4_3g45690 FvH4_3g45700 FvH4_3g45700 FvH4_3g45700 FvH4_3g45700 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730
malus_domestica MD11G1020200.v1.1 MD15G1398500.v1.1
rosa_chinensis RchiOBHm_Chr1g0326201 RchiOBHm_Chr5g0064091 RchiOBHm_Chr5g0076771 RchiOBHm_Chr5g0078181 RchiOBHm_Chr5g0078321 RchiOBHm_Chr5g0079331 RchiOBHm_Chr5g0079341 RchiOBHm_Chr5g0079351 RchiOBHm_Chr5g0079361 RchiOBHm_Chr5g0079441 RchiOBHm_Chr5g0079821 RchiOBHm_Chr5g0080071 RchiOBHm_Chr7g0212731 RchiOBHm_Chr7g0224201
rosa_laevigata RLG00000002871
rosa_multiflora Rmu_co8378879.1_g000001 Rmu_co8466133.1_g000001 Rmu_sc0000595.1_g000019 Rmu_sc0000616.1_g000025 Rmu_sc0000631.1_g000033 Rmu_sc0000945.1_g000004 Rmu_sc0001148.1_g000022 Rmu_sc0001226.1_g000016 Rmu_sc0002187.1_g000037 Rmu_sc0006084.1_g000005 Rmu_sc0006084.1_g000009 Rmu_sc0006084.1_g000019 Rmu_sc0006084.1_g000021
rosa_roxburghii Rroxscaffold_1G00001540 Rroxscaffold_1G00003210 Rroxscaffold_1G00003250 Rroxscaffold_1G00003340 Rroxscaffold_1G00003580 Rroxscaffold_1G00003940 Rroxscaffold_3G00228660 Rroxscaffold_3G00247850
rosa_rugosa Rorug05G0465800 Rorug05G0466100 Rorug07G0125700 Rorug07G0136300
rosa_wichuraiana Rw0G005160 Rw0G022760 Rw5G047710 Rw5G048070 Rw5G048080 Rw5G048150 Rw5G048180 Rw5G048210 Rw5G048250 Rw5G048290 Rw7G023250 Rw7G030960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 341
Acc36I ACCTGC 1 cut(s) 539
AccII CGCG 1 cut(s) 418
AciI CCGC 2 cut(s) 117, 356
AclWI GGATC 4 cut(s) 580, 634, 647, 1450
AcoI YGGCCR 3 cut(s) 1170, 1282, 1325
AcsI RAATTY 6 cut(s) 130, 517, 1333, 1377, 1438, 1518
AcuI CTGAAG 1 cut(s) 1115
AcyI GRCGYC 1 cut(s) 1026
AfaI GTAC 3 cut(s) 1178, 1449, 1513
AfiI CCNNNNNNNGG 3 cut(s) 312, 475, 1368
AflIII ACRYGT 1 cut(s) 400
AhdI GACNNNNNGTC 1 cut(s) 1030
AjnI CCWGG 1 cut(s) 474
AjuI GAANNNNNNNTTGG 4 cut(s) 720, 752, 1022, 1054
AloI GAACNNNNNNTCC 2 cut(s) 965, 997
Alw21I GWGCWC 2 cut(s) 660, 892
Alw26I GTCTC 3 cut(s) 3, 633, 863
AlwI GGATC 4 cut(s) 580, 634, 647, 1450
AoxI GGCC 8 cut(s) 57, 162, 303, 510, 771, 1170, 1282, 1325
ApeKI GCWGC 5 cut(s) 120, 926, 1050, 1308, 1567
ApoI RAATTY 6 cut(s) 130, 517, 1333, 1377, 1438, 1518
ArsI GACNNNNNNTTYG 2 cut(s) 607, 639
Asp700I GAANNNNTTC 1 cut(s) 735
AspLEI GCGC 1 cut(s) 418
AspS9I GGNCC 2 cut(s) 162, 771
AsuC2I CCSGG 1 cut(s) 1061
AsuHPI GGTGA 4 cut(s) 227, 406, 679, 1220
AsuII TTCGAA 1 cut(s) 279
BalI TGGCCA 3 cut(s) 1172, 1284, 1327
BamHI GGATCC 1 cut(s) 639
BanII GRGCYC 1 cut(s) 660
BbsI GAAGAC 4 cut(s) 105, 620, 1092, 1350
Bbv12I GWGCWC 2 cut(s) 660, 892
BbvI GCAGC 5 cut(s) 107, 938, 1037, 1295, 1554
BccI CCATC 5 cut(s) 305, 1199, 1211, 1274, 1540
BceAI ACGGC 1 cut(s) 149
BcgI CGANNNNNNTGC 2 cut(s) 1559, 1593
BciT130I CCWGG 1 cut(s) 476
BclI TGATCA 1 cut(s) 436
BcnI CCSGG 1 cut(s) 1061
BcoDI GTCTC 3 cut(s) 3, 633, 863
BfaI CTAG 2 cut(s) 938, 1574
BfmI CTRYAG 1 cut(s) 1430
BfuAI ACCTGC 1 cut(s) 539
BglI GCCNNNNNGGC 1 cut(s) 117
BisI GCNGC 6 cut(s) 118, 121, 927, 1051, 1309, 1568
BlpI GCTNAGC 1 cut(s) 998
BlsI GCNGC 6 cut(s) 119, 122, 928, 1052, 1310, 1569
Bme1390I CCNGG 2 cut(s) 476, 1061
BmeRI GACNNNNNGTC 1 cut(s) 1030
BmgT120I GGNCC 2 cut(s) 162, 771
BmiI GGNNCC 1 cut(s) 641
BmrFI CCNGG 2 cut(s) 476, 1061
BmsI GCATC 6 cut(s) 37, 58, 1117, 1135, 1277, 1579
BpiI GAAGAC 4 cut(s) 105, 620, 1092, 1350
BpmI CTGGAG 1 cut(s) 1400
Bpu1102I GCTNAGC 1 cut(s) 998
Bpu14I TTCGAA 1 cut(s) 279
BpuEI CTTGAG 1 cut(s) 26
BpuMI CCSGG 1 cut(s) 1061
Bsa29I ATCGAT 1 cut(s) 66
BsaHI GRCGYC 1 cut(s) 1026
BsaI GGTCTC 1 cut(s) 863
BsaJI CCNNGG 5 cut(s) 24, 112, 306, 390, 1285
BsaXI ACNNNNNCTCC 3 cut(s) 30, 965, 995
Bsc4I CCNNNNNNNGG 3 cut(s) 312, 475, 1368
Bse3DI GCAATG 1 cut(s) 351
BseBI CCWGG 1 cut(s) 476
BseCI ATCGAT 1 cut(s) 66
BseDI CCNNGG 5 cut(s) 24, 112, 306, 390, 1285
BseGI GGATG 6 cut(s) 52, 316, 982, 1210, 1226, 1285
BseLI CCNNNNNNNGG 3 cut(s) 312, 475, 1368
BseMI GCAATG 1 cut(s) 351
BseMII CTCAG 1 cut(s) 989
BseRI GAGGAG 1 cut(s) 986
BseXI GCAGC 5 cut(s) 107, 938, 1037, 1295, 1554
Bsh1236I CGCG 1 cut(s) 418
BshFI GGCC 8 cut(s) 59, 164, 305, 512, 773, 1172, 1284, 1327
BshVI ATCGAT 1 cut(s) 66
BsiHKAI GWGCWC 2 cut(s) 660, 892
BsiSI CCGG 2 cut(s) 93, 1061
BslFI GGGAC 2 cut(s) 931, 1262
BslI CCNNNNNNNGG 3 cut(s) 312, 475, 1368
BsmAI GTCTC 3 cut(s) 3, 633, 863
BsmBI CGTCTC 1 cut(s) 3
BsmFI GGGAC 2 cut(s) 931, 1262
BsmI GAATGC 1 cut(s) 1236
BsnI GGCC 8 cut(s) 59, 164, 305, 512, 773, 1172, 1284, 1327
Bso31I GGTCTC 1 cut(s) 863
Bsp119I TTCGAA 1 cut(s) 279
Bsp1286I GDGCHC 2 cut(s) 660, 892
Bsp143I GATC 6 cut(s) 436, 585, 639, 646, 1455, 1576
Bsp1720I GCTNAGC 1 cut(s) 998
Bsp19I CCATGG 2 cut(s) 306, 390
BspACI CCGC 2 cut(s) 117, 356
BspANI GGCC 8 cut(s) 59, 164, 305, 512, 773, 1172, 1284, 1327
BspCNI CTCAG 1 cut(s) 990
BspDI ATCGAT 1 cut(s) 66
BspFNI CGCG 1 cut(s) 418
BspHI TCATGA 1 cut(s) 318
BspLI GGNNCC 1 cut(s) 641
BspMI ACCTGC 1 cut(s) 539
BspPI GGATC 4 cut(s) 580, 634, 647, 1450
BspQI GCTCTTC 1 cut(s) 716
BspT104I TTCGAA 1 cut(s) 279
BspTNI GGTCTC 1 cut(s) 863
BsrDI GCAATG 1 cut(s) 351
BssECI CCNNGG 5 cut(s) 24, 112, 306, 390, 1285
BssMI GATC 6 cut(s) 436, 585, 639, 646, 1455, 1576
BssNI GRCGYC 1 cut(s) 1026
BssT1I CCWWGG 3 cut(s) 306, 390, 1285
Bst2UI CCWGG 1 cut(s) 476
Bst4CI ACNGT 4 cut(s) 149, 220, 349, 1434
Bst6I CTCTTC 2 cut(s) 195, 716
BstACI GRCGYC 1 cut(s) 1026
BstBI TTCGAA 1 cut(s) 279
BstC8I GCNNGC 6 cut(s) 410, 414, 428, 498, 510, 1306
BstDEI CTNAG 1 cut(s) 998
BstDSI CCRYGG 2 cut(s) 306, 390
BstF5I GGATG 6 cut(s) 52, 316, 982, 1210, 1226, 1285
BstFNI CGCG 1 cut(s) 418
BstHHI GCGC 1 cut(s) 418
BstKTI GATC 6 cut(s) 439, 588, 642, 649, 1458, 1579
BstMAI GTCTC 3 cut(s) 3, 633, 863
BstMBI GATC 6 cut(s) 436, 585, 639, 646, 1455, 1576
BstMWI GCNNNNNNNGC 5 cut(s) 56, 117, 290, 875, 1564
BstNI CCWGG 1 cut(s) 476
BstNSI RCATGY 2 cut(s) 111, 404
BstSCI CCNGG 2 cut(s) 474, 1059
BstSFI CTRYAG 1 cut(s) 1430
BstUI CGCG 1 cut(s) 418
BstV1I GCAGC 5 cut(s) 107, 938, 1037, 1295, 1554
BstV2I GAAGAC 4 cut(s) 105, 620, 1092, 1350
BstX2I RGATCY 3 cut(s) 585, 639, 1455
BstYI RGATCY 3 cut(s) 585, 639, 1455
Bsu15I ATCGAT 1 cut(s) 66
BsuRI GGCC 8 cut(s) 59, 164, 305, 512, 773, 1172, 1284, 1327
BsuTUI ATCGAT 1 cut(s) 66
BtgI CCRYGG 2 cut(s) 306, 390
BtsCI GGATG 6 cut(s) 52, 316, 982, 1210, 1226, 1285
BtsIMutI CAGTG 2 cut(s) 326, 345
BveI ACCTGC 1 cut(s) 539
Cac8I GCNNGC 6 cut(s) 410, 414, 428, 498, 510, 1306
CciI TCATGA 1 cut(s) 318
CfoI GCGC 1 cut(s) 418
Cfr13I GGNCC 2 cut(s) 162, 771
ClaI ATCGAT 1 cut(s) 66
CseI GACGC 1 cut(s) 1034
CsiI ACCWGGT 1 cut(s) 474
Csp6I GTAC 3 cut(s) 1177, 1448, 1512
CviQI GTAC 3 cut(s) 1177, 1448, 1512
DdeI CTNAG 1 cut(s) 998
DpnI GATC 6 cut(s) 438, 587, 641, 648, 1457, 1578
DpnII GATC 6 cut(s) 436, 585, 639, 646, 1455, 1576
DrdI GACNNNNNNGTC 1 cut(s) 341
DriI GACNNNNNGTC 1 cut(s) 1030
DseDI GACNNNNNNGTC 1 cut(s) 341
EaeI YGGCCR 3 cut(s) 1170, 1282, 1325
Eam1104I CTCTTC 2 cut(s) 195, 716
Eam1105I GACNNNNNGTC 1 cut(s) 1030
EarI CTCTTC 2 cut(s) 195, 716
Ecl136II GAGCTC 1 cut(s) 658
Eco130I CCWWGG 3 cut(s) 306, 390, 1285
Eco24I GRGCYC 1 cut(s) 660
Eco31I GGTCTC 1 cut(s) 863
Eco32I GATATC 2 cut(s) 748, 1075
Eco53kI GAGCTC 1 cut(s) 658
Eco57I CTGAAG 1 cut(s) 1115
EcoICRI GAGCTC 1 cut(s) 658
EcoRI GAATTC 1 cut(s) 1333
EcoRII CCWGG 1 cut(s) 474
EcoRV GATATC 2 cut(s) 748, 1075
EcoT14I CCWWGG 3 cut(s) 306, 390, 1285
EcoT22I ATGCAT 2 cut(s) 1236, 1489
EcoT38I GRGCYC 1 cut(s) 660
ErhI CCWWGG 3 cut(s) 306, 390, 1285
Esp3I CGTCTC 1 cut(s) 3
FaqI GGGAC 2 cut(s) 931, 1262
FbaI TGATCA 1 cut(s) 436
Fnu4HI GCNGC 6 cut(s) 118, 121, 927, 1051, 1309, 1568
FokI GGATG 6 cut(s) 59, 323, 989, 1217, 1233, 1292
FriOI GRGCYC 1 cut(s) 660
Fsp4HI GCNGC 6 cut(s) 118, 121, 927, 1051, 1309, 1568
FspBI CTAG 2 cut(s) 938, 1574
GlaI GCGC 1 cut(s) 417
GluI GCNGC 6 cut(s) 118, 121, 927, 1051, 1309, 1568
GsuI CTGGAG 1 cut(s) 1400
HaeIII GGCC 8 cut(s) 59, 164, 305, 512, 773, 1172, 1284, 1327
HapII CCGG 2 cut(s) 93, 1061
HgaI GACGC 1 cut(s) 1034
HhaI GCGC 1 cut(s) 418
Hin1I GRCGYC 1 cut(s) 1026
Hin6I GCGC 1 cut(s) 416
HinP1I GCGC 1 cut(s) 416
HincII GTYRAC 1 cut(s) 267
HindII GTYRAC 1 cut(s) 267
HindIII AAGCTT 1 cut(s) 1185
HinfI GANTC 8 cut(s) 254, 484, 736, 764, 806, 1067, 1243, 1602
HpaII CCGG 2 cut(s) 93, 1061
HphI GGTGA 4 cut(s) 227, 406, 679, 1220
Hpy166II GTNNAC 4 cut(s) 235, 258, 267, 1211
Hpy188I TCNGA 6 cut(s) 25, 129, 757, 896, 986, 1072
Hpy188III TCNNGA 8 cut(s) 319, 589, 743, 1124, 1247, 1391, 1417, 1574
Hpy8I GTNNAC 4 cut(s) 235, 258, 267, 1211
Hpy99I CGWCG 1 cut(s) 936
HpyAV CCTTC 3 cut(s) 316, 781, 829
HpyCH4III ACNGT 4 cut(s) 149, 220, 349, 1434
HpyCH4IV ACGT 1 cut(s) 342
HpyF10VI GCNNNNNNNGC 5 cut(s) 56, 117, 290, 875, 1564
HpyF3I CTNAG 1 cut(s) 998
HpySE526I ACGT 1 cut(s) 342
Hsp92I GRCGYC 1 cut(s) 1026
HspAI GCGC 1 cut(s) 416
Ksp22I TGATCA 1 cut(s) 436
Kzo9I GATC 6 cut(s) 436, 585, 639, 646, 1455, 1576
LguI GCTCTTC 1 cut(s) 716
LmnI GCTCC 2 cut(s) 663, 1563
Lsp1109I GCAGC 5 cut(s) 107, 938, 1037, 1295, 1554
LweI GCATC 6 cut(s) 37, 58, 1117, 1135, 1277, 1579
MabI ACCWGGT 1 cut(s) 474
MaeI CTAG 2 cut(s) 938, 1574
MaeII ACGT 1 cut(s) 342
MaeIII GTNAC 3 cut(s) 143, 343, 821
MalI GATC 6 cut(s) 438, 587, 641, 648, 1457, 1578
MboI GATC 6 cut(s) 436, 585, 639, 646, 1455, 1576
MfeI CAATTG 1 cut(s) 864
MflI RGATCY 3 cut(s) 585, 639, 1455
MhlI GDGCHC 2 cut(s) 660, 892
MlsI TGGCCA 3 cut(s) 1172, 1284, 1327
MluNI TGGCCA 3 cut(s) 1172, 1284, 1327
MlyI GAGTC 2 cut(s) 263, 1061
Mox20I TGGCCA 3 cut(s) 1172, 1284, 1327
Mph1103I ATGCAT 2 cut(s) 1236, 1489
MroXI GAANNNNTTC 1 cut(s) 735
MscI TGGCCA 3 cut(s) 1172, 1284, 1327
Msp20I TGGCCA 3 cut(s) 1172, 1284, 1327
MspI CCGG 2 cut(s) 93, 1061
MspR9I CCNGG 2 cut(s) 476, 1061
MunI CAATTG 1 cut(s) 864
Mva1269I GAATGC 1 cut(s) 1236
MvaI CCWGG 1 cut(s) 476
MvnI CGCG 1 cut(s) 418
MwoI GCNNNNNNNGC 5 cut(s) 56, 117, 290, 875, 1564
NciI CCSGG 1 cut(s) 1061
NcoI CCATGG 2 cut(s) 306, 390
NdeII GATC 6 cut(s) 436, 585, 639, 646, 1455, 1576
NlaIV GGNNCC 1 cut(s) 641
NmeAIII GCCGAG 1 cut(s) 93
NmuCI GTSAC 2 cut(s) 343, 821
NsiI ATGCAT 2 cut(s) 1236, 1489
NspI RCATGY 2 cut(s) 111, 404
NspV TTCGAA 1 cut(s) 279
PagI TCATGA 1 cut(s) 318
PciI ACATGT 1 cut(s) 400
PciSI GCTCTTC 1 cut(s) 716
PctI GAATGC 1 cut(s) 1236
PdmI GAANNNNTTC 1 cut(s) 735
PfeI GAWTC 6 cut(s) 484, 736, 764, 806, 1243, 1602
PfoI TCCNGGA 1 cut(s) 1059
PkrI GCNGC 6 cut(s) 119, 122, 928, 1052, 1310, 1569
PleI GAGTC 2 cut(s) 262, 1061
PpsI GAGTC 2 cut(s) 262, 1061
PscI ACATGT 1 cut(s) 400
Psp124BI GAGCTC 1 cut(s) 660
Psp6I CCWGG 1 cut(s) 474
PspGI CCWGG 1 cut(s) 474
PspN4I GGNNCC 1 cut(s) 641
PspPI GGNCC 2 cut(s) 162, 771
PsuI RGATCY 3 cut(s) 585, 639, 1455
RsaI GTAC 3 cut(s) 1178, 1449, 1513
RsaNI GTAC 3 cut(s) 1177, 1448, 1512
SacI GAGCTC 1 cut(s) 660
SapI GCTCTTC 1 cut(s) 716
SatI GCNGC 6 cut(s) 118, 121, 927, 1051, 1309, 1568
Sau3AI GATC 6 cut(s) 436, 585, 639, 646, 1455, 1576
Sau96I GGNCC 2 cut(s) 162, 771
SchI GAGTC 2 cut(s) 263, 1061
ScrFI CCNGG 2 cut(s) 476, 1061
SduI GDGCHC 2 cut(s) 660, 892
SexAI ACCWGGT 1 cut(s) 474
SfaNI GCATC 6 cut(s) 37, 58, 1117, 1135, 1277, 1579
SfcI CTRYAG 1 cut(s) 1430
SfuI TTCGAA 1 cut(s) 279
SmlI CTYRAG 1 cut(s) 41
SmoI CTYRAG 1 cut(s) 41
SsiI CCGC 2 cut(s) 117, 356
SspMI CTAG 2 cut(s) 938, 1574
SstI GAGCTC 1 cut(s) 660
StyD4I CCNGG 2 cut(s) 474, 1059
StyI CCWWGG 3 cut(s) 306, 390, 1285
TaaI ACNGT 4 cut(s) 149, 220, 349, 1434
TaiI ACGT 1 cut(s) 345
TaqI TCGA 8 cut(s) 66, 252, 279, 744, 931, 1083, 1123, 1500
TatI WGTACW 1 cut(s) 1447
TauI GCSGC 1 cut(s) 120
TfiI GAWTC 6 cut(s) 484, 736, 764, 806, 1243, 1602
TscAI CASTG 2 cut(s) 333, 352
TseFI GTSAC 2 cut(s) 343, 821
TseI GCWGC 5 cut(s) 120, 926, 1050, 1308, 1567
Tsp45I GTSAC 2 cut(s) 343, 821
TspDTI ATGAA 7 cut(s) 17, 200, 335, 728, 734, 1389, 1515
TspGWI ACGGA 1 cut(s) 1610
TspRI CASTG 2 cut(s) 333, 352
XapI RAATTY 6 cut(s) 130, 517, 1333, 1377, 1438, 1518
XbaI TCTAGA 1 cut(s) 1573
XceI RCATGY 2 cut(s) 111, 404
XmnI GAANNNNTTC 1 cut(s) 735
XspI CTAG 2 cut(s) 938, 1574
Zsp2I ATGCAT 2 cut(s) 1236, 1489
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.