Rroxscaffold_1G00003340

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000379
Physical Location & Seq
Forward (+)
4028377 .. 4033450
5074 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00003340.1

Sequence Viewer

Length: 2736 bp
ATGGATGAGGTTAAGAAGGCGCTAACAGATGACGAGATCACTGCCGTTGGTGTCTACGGCATGGGCGGCGTTGGAAAGACAAGCATGGTGAGACACGTAGCTGCACAAGCCTGCAAAAATGGTACTTTTAACCATTGGATTATGGCTGCCATATCCCAAAGCCCTGACTACAGAAAAGTTCAAGGCACATTGGCAGACCTATTGGGCATCAAATTGATGGCGGAGACAGAAGATGGAAGAGCCGCTAGGCTGCTTAATGAGATAAGGAGAAGAGAAAAACTCCTGATTATCTTGGACGATGTTTGGAACAGAACAGAATTGTCAACCATAGGAATTCCCAGCTACGAGGAGCTTCAAAAGTGCATATCCAAAGTCTTACTCACCACACGGAGAAGGAATGTCTGTCATGTCATGAAGTGCCAAGCAAGCATTCCTCTCAATATCTTATCAGAACAAGATTCTTGGACCTTGTTTGTGAGAAATACAAGGTCTTTTGAATGGACCACTTTTGAGGGTGTAGCGAGGAAGGTAGCTGGAGAATGCAGGGGTCTACCCATTGCCTTGATAGCAGTTGCAAGGGCACTCGGAGATAAAGATGAGGCGGAATGGCAAAAAGCAGTTCGAAGACTAGAGAAGTCGCAATCTGCAACCGTTGAGGATGAGGAAGATATATTCAAATGTATAAAATTGAGCTATGATTACTTGAAAGATGAGGATTCCAAGTCATGCTTCTTGCTCTGTTGCCTATACCCAGAAGACCATGACATCCGACTAGAAAACTTATTCAAGTATGCAATCGGGACAGGGTTGTTTCGACGAGATGCCGAAACAATCGAAGAAGCCAGAGGAACAGCAGATTCAGTGGTCAAGTACCTGAAAGATTCTAGCTTGCTTTTGGAGGGTTATGATAAGGGATTTGTAAAGATGCATGATGTCATCCGGGATACAGCCCTGAATATTGCAAAATCTAAAGATGGGCACGGGTTTCTGGTAAAAGCTGGGTGTGGTTTAAAGGTTTGGCCATGTGGATCACATCAAGGCTACTCTGCAATCTCACTAATGAGGAACGAAATTCGCAAGCTGCCCGATGAAGAGTTGGTATGTCCAGATCTCCAGATTTTGTTACTGAAACAGAATGCTGATTTAGATGAGATCCCAGAAAAGTTCATCCAAAGTCTGAATGAATTAAGGGTCTTGGATCTTAGCAACACGAGTATTTCCTCTCTACCCCAATCATTCAGTCTCCTTACCAGCCTCCAAGCTTTGTATTTAGATTTTTGCAAGAATTTGATTGAGGACATTTCTATAGTGGGAAAACTGAAGAAGCTTGAAATTCTTAGTATGAGGGAATATCCTGGGGAGGAATTGTCGAGAGAAATCGGACATCTGACCAATCTAAGGATTTTGGATGTCAGTGCCTCTTGTTTTGAAGGTAAAGTCACAATTCCATCTAAAGTGATATCAAAGTTGCATAAATTAGAAGAACTGTATATACTGAACTGTGGATTTGAGGATTGGGGGAGTAACGTTGAGAGAGAATTGGATTTTGCTGGTTTGTCACGTTTGAAAATTTTGCAGGTTTGCATATCTGATGCAAATTGCATTCCTAAAAATGTCGTAGTCAAACCAGATTGGGATTGCTTTCATATACTTATCGGCAGTTTCATCAAACCGTATCCATCCAATGAATATGATTATAAATCAAGATCCTTGGTTCTTGGGAGTACCATGAGTACCTTACCTGATTGGTTTATCAACGCGGTGACAGAGAAAACAGAGAAGCTAGAGTATGAATGCTGCGAAGGGATGAGTGACATTCTTATGGAATACGACAATGGGAGGTTACATAAACTCAAGCATCTCAAAGTACTGGGTTATCTTCTTGATTTAGGACCAGTGTTGATGAACACAACAAGACGAGTTCAAAAAGGACCAGTGTTTGAGGAGTTGGAAGAGTTGCATCTGATATCTTTGATCCACCTTGAGGAGCTGTGTGTTGGTGAGTTACCACACGGGTCTCTCATTAATCTTAAGGTATTTTATGTGGTTTCTTGTCCTAACTTGGGGAATGTATCAAAATTTGTACAGAGATTACCAAATCTAGAGAAACTATATTTAAATGATACGTCTAAATTGGAATATGTGTTCAAATGCGAAGGGTTTAAGCTTAAACAATCAAAACTCAGAGAGATGCATTTGTTGGGTCAAAATTCAATGAAAAACATTTGTAGTGGTCCTGCCCCATGTGTAATGTTCCAGAGTGTTAAATGTTTGAACTTTTACCGTTGTAAGCTGCTGCAAAGTCTGTTCGCATCTGATGTAGCCAAGTGTCTCTTTCAATTGGAAGACCTTTTTGTAGAGCAGTGCCCTTTGTTGGAAAGAGTAATTGAAGCGGTGAATAACGAGAAGACGATTCTACCAAAATTGAAGAACTTGGTTTTAATGGGACTTCCTATGTTATATGGTGCAAGTGGTACTATTGATATTGAGTGTCCATCATTGGAACACTTGATTGTGGGGAATTGCCCCCAGTTTTCATTTTCAACTTCTTTCGTGGATCTCTTCGACCTCGAAAGTGGGAACCGGTTTTCATTTTCAACCTCTGCTTCTAACTACTTTGGCAGCACGAACCCAGTCCAACTCAATGATCCACAACTGTACAGATTTCTACTTGAAAGAATATTTCACGGCGGCGATGCAACAGTGTATTGTATTCCCAGTTGGGAAATCTCTTAA

Protein Analysis

911

Amino Acids

103.0

Weight (kDa)

5.69

Isoelectric Point (pI)

42.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 1 - 159 6.3e-28 NB-ARC domain
LRR_8 PF13855 370 - 427 1.9e-09 Leucine rich repeat
LRR_14 PF23598 374 - 528 7.8e-17 Leucine-rich repeat region
LRR_RPS2 PF23247 650 - 789 6.7e-15 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 729 - 844 1.4e-09 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000379)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17740 FvH4_1g17740 FvH4_1g17740 FvH4_1g17740 FvH4_3g42940 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43871 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43940 FvH4_3g43991 FvH4_3g44561 FvH4_3g44570 FvH4_3g44610 FvH4_3g44670 FvH4_3g44670 FvH4_3g44680 FvH4_3g44680 FvH4_3g44680 FvH4_3g45170 FvH4_3g45170 FvH4_3g45170 FvH4_3g45170 FvH4_3g45630 FvH4_3g45643 FvH4_3g45680 FvH4_3g45690 FvH4_3g45700 FvH4_3g45700 FvH4_3g45700 FvH4_3g45700 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730
malus_domestica MD11G1020200.v1.1 MD15G1398500.v1.1
rosa_chinensis RchiOBHm_Chr1g0326201 RchiOBHm_Chr5g0064091 RchiOBHm_Chr5g0076771 RchiOBHm_Chr5g0078181 RchiOBHm_Chr5g0078321 RchiOBHm_Chr5g0079331 RchiOBHm_Chr5g0079341 RchiOBHm_Chr5g0079351 RchiOBHm_Chr5g0079361 RchiOBHm_Chr5g0079441 RchiOBHm_Chr5g0079821 RchiOBHm_Chr5g0080071 RchiOBHm_Chr7g0212731 RchiOBHm_Chr7g0224201
rosa_laevigata RLG00000002871
rosa_multiflora Rmu_co8378879.1_g000001 Rmu_co8466133.1_g000001 Rmu_sc0000595.1_g000019 Rmu_sc0000616.1_g000025 Rmu_sc0000631.1_g000033 Rmu_sc0000945.1_g000004 Rmu_sc0001148.1_g000022 Rmu_sc0001226.1_g000016 Rmu_sc0002187.1_g000037 Rmu_sc0006084.1_g000005 Rmu_sc0006084.1_g000009 Rmu_sc0006084.1_g000019 Rmu_sc0006084.1_g000021
rosa_roxburghii Rroxscaffold_1G00001540 Rroxscaffold_1G00003210 Rroxscaffold_1G00003250 Rroxscaffold_1G00003340 Rroxscaffold_1G00003580 Rroxscaffold_1G00003940 Rroxscaffold_3G00228660 Rroxscaffold_3G00247850
rosa_rugosa Rorug05G0465800 Rorug05G0466100 Rorug07G0125700 Rorug07G0136300
rosa_wichuraiana Rw0G005160 Rw0G022760 Rw5G047710 Rw5G048070 Rw5G048080 Rw5G048150 Rw5G048180 Rw5G048210 Rw5G048250 Rw5G048290 Rw7G023250 Rw7G030960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1698
Acc36I ACCTGC 1 cut(s) 1567
AccI GTMKAC 2 cut(s) 54, 550
AccII CGCG 1 cut(s) 1760
AciI CCGC 7 cut(s) 66, 221, 243, 602, 1760, 2393, 2691
AclI AACGTT 1 cut(s) 1527
AclWI GGATC 7 cut(s) 1036, 1147, 1206, 1701, 1969, 2565, 2642
AcoI YGGCCR 1 cut(s) 1019
AcsI RAATTY 7 cut(s) 333, 1071, 1285, 1332, 1569, 2078, 2209
AcuI CTGAAG 1 cut(s) 1340
AfaI GTAC 8 cut(s) 124, 872, 1726, 1735, 1869, 2085, 2476, 2660
AfiI CCNNNNNNNGG 4 cut(s) 1398, 1984, 2063, 2374
AflII CTTAAG 1 cut(s) 2030
AflIII ACRYGT 1 cut(s) 94
AgeI ACCGGT 1 cut(s) 2583
AjnI CCWGG 1 cut(s) 1354
AjuI GAANNNNNNNTTGG 4 cut(s) 414, 446, 713, 745
AloI GAACNNNNNNTCC 2 cut(s) 2129, 2161
Alw26I GTCTC 5 cut(s) 85, 218, 1247, 2022, 2336
AlwI GGATC 7 cut(s) 1036, 1147, 1206, 1701, 1969, 2565, 2642
AoxI GGCC 1 cut(s) 1019
ApeKI GCWGC 8 cut(s) 101, 146, 250, 1081, 1797, 2293, 2296, 2622
ApoI RAATTY 7 cut(s) 333, 1071, 1285, 1332, 1569, 2078, 2209
AseI ATTAAT 1 cut(s) 2025
AsiGI ACCGGT 1 cut(s) 2583
AspLEI GCGC 1 cut(s) 22
AspS9I GGNCC 5 cut(s) 465, 501, 1892, 1931, 2234
AsuC2I CCSGG 1 cut(s) 941
AsuHPI GGTGA 5 cut(s) 100, 373, 1774, 2012, 2407
AsuII TTCGAA 1 cut(s) 622
AvaII GGWCC 5 cut(s) 465, 501, 1892, 1931, 2234
BaeGI GKGCMC 3 cut(s) 583, 981, 2369
BalI TGGCCA 1 cut(s) 1021
BauI CACGAG 1 cut(s) 1210
BbsI GAAGAC 4 cut(s) 631, 762, 2352, 2414
BbvI GCAGC 8 cut(s) 88, 133, 237, 1068, 1784, 2280, 2283, 2634
BccI CCATC 6 cut(s) 211, 227, 968, 1456, 1687, 2503
BceAI ACGGC 3 cut(s) 29, 73, 2704
BcgI CGANNNNNNTGC 2 cut(s) 23, 57
BciT130I CCWGG 1 cut(s) 1356
BciVI GTATCC 2 cut(s) 937, 1686
BcnI CCSGG 1 cut(s) 941
BcoDI GTCTC 5 cut(s) 85, 218, 1247, 2022, 2336
BfaI CTAG 6 cut(s) 246, 629, 773, 885, 1784, 2102
BfmI CTRYAG 2 cut(s) 169, 1305
BfoI RGCGCY 1 cut(s) 23
BfrI CTTAAG 1 cut(s) 2030
BfuAI ACCTGC 1 cut(s) 1567
BfuI GTATCC 2 cut(s) 937, 1686
BglII AGATCT 1 cut(s) 1108
BmcAI AGTACT 1 cut(s) 1869
Bme1390I CCNGG 2 cut(s) 941, 1356
Bme18I GGWCC 5 cut(s) 465, 501, 1892, 1931, 2234
BmgT120I GGNCC 5 cut(s) 465, 501, 1892, 1931, 2234
BmiI GGNNCC 1 cut(s) 2582
BmrFI CCNGG 2 cut(s) 941, 1356
BmrI ACTGGG 4 cut(s) 1880, 2524, 2627, 2712
BmsI GCATC 9 cut(s) 216, 811, 915, 1582, 1867, 1969, 2181, 2321, 2686
BmuI ACTGGG 4 cut(s) 1880, 2524, 2627, 2712
BpiI GAAGAC 4 cut(s) 631, 762, 2352, 2414
BplI GAGNNNNNCTC 2 cut(s) 264, 296
BpmI CTGGAG 2 cut(s) 555, 1097
Bpu14I TTCGAA 1 cut(s) 622
BpuEI CTTGAG 2 cut(s) 1838, 2003
BpuMI CCSGG 1 cut(s) 941
BsaAI YACGTR 1 cut(s) 97
BsaI GGTCTC 1 cut(s) 2022
BsaJI CCNNGG 2 cut(s) 1355, 1710
BsaWI WCCGGW 1 cut(s) 2583
BsaXI ACNNNNNCTCC 2 cut(s) 1352, 1382
Bsc4I CCNNNNNNNGG 4 cut(s) 1398, 1984, 2063, 2374
Bse118I RCCGGY 1 cut(s) 2583
Bse1I ACTGG 6 cut(s) 1875, 1895, 1934, 2530, 2633, 2718
Bse3DI GCAATG 1 cut(s) 555
BseBI CCWGG 1 cut(s) 1356
BseDI CCNNGG 2 cut(s) 1355, 1710
BseGI GGATG 8 cut(s) 10, 664, 765, 936, 1167, 1414, 1679, 1812
BseLI CCNNNNNNNGG 4 cut(s) 1398, 1984, 2063, 2374
BseMI GCAATG 1 cut(s) 555
BseMII CTCAG 1 cut(s) 2197
BseNI ACTGG 6 cut(s) 1875, 1895, 1934, 2530, 2633, 2718
BseRI GAGGAG 3 cut(s) 362, 1958, 2000
BseSI GKGCMC 3 cut(s) 583, 981, 2369
BseXI GCAGC 8 cut(s) 88, 133, 237, 1068, 1784, 2280, 2283, 2634
BseYI CCCAGC 2 cut(s) 338, 998
BsgI GTGCAG 1 cut(s) 87
Bsh1236I CGCG 1 cut(s) 1760
BshFI GGCC 1 cut(s) 1021
BshTI ACCGGT 1 cut(s) 2583
BsiSI CCGG 2 cut(s) 940, 2584
BslFI GGGAC 2 cut(s) 814, 2460
BslI CCNNNNNNNGG 4 cut(s) 1398, 1984, 2063, 2374
BsmAI GTCTC 5 cut(s) 85, 218, 1247, 2022, 2336
BsmFI GGGAC 2 cut(s) 814, 2460
BsmI GAATGC 5 cut(s) 429, 545, 1141, 1602, 1799
BsnI GGCC 1 cut(s) 1021
Bso31I GGTCTC 1 cut(s) 2022
Bsp119I TTCGAA 1 cut(s) 622
Bsp1286I GDGCHC 3 cut(s) 583, 981, 2369
Bsp1407I TGTACA 2 cut(s) 2083, 2658
Bsp143I GATC 9 cut(s) 36, 1028, 1108, 1152, 1198, 1706, 1974, 2557, 2647
BspACI CCGC 7 cut(s) 66, 221, 243, 602, 1760, 2393, 2691
BspANI GGCC 1 cut(s) 1021
BspCNI CTCAG 1 cut(s) 2196
BspFNI CGCG 1 cut(s) 1760
BspHI TCATGA 1 cut(s) 411
BspLI GGNNCC 1 cut(s) 2582
BspMI ACCTGC 1 cut(s) 1567
BspPI GGATC 7 cut(s) 1036, 1147, 1206, 1701, 1969, 2565, 2642
BspQI GCTCTTC 1 cut(s) 232
BspT104I TTCGAA 1 cut(s) 622
BspTI CTTAAG 1 cut(s) 2030
BspTNI GGTCTC 1 cut(s) 2022
BsrDI GCAATG 1 cut(s) 555
BsrFI RCCGGY 1 cut(s) 2583
BsrGI TGTACA 2 cut(s) 2083, 2658
BsrI ACTGG 6 cut(s) 1875, 1895, 1934, 2530, 2633, 2718
BssAI RCCGGY 1 cut(s) 2583
BssECI CCNNGG 2 cut(s) 1355, 1710
BssMI GATC 9 cut(s) 36, 1028, 1108, 1152, 1198, 1706, 1974, 2557, 2647
BssSI CACGAG 1 cut(s) 1210
BssT1I CCWWGG 1 cut(s) 1710
Bst2BI CACGAG 1 cut(s) 1210
Bst2UI CCWGG 1 cut(s) 1356
Bst4CI ACNGT 7 cut(s) 652, 1488, 1502, 1674, 2285, 2658, 2704
Bst6I CTCTTC 5 cut(s) 232, 265, 1086, 1947, 2567
BstAFI CTTAAG 1 cut(s) 2030
BstAUI TGTACA 2 cut(s) 2083, 2658
BstBAI YACGTR 1 cut(s) 97
BstBI TTCGAA 1 cut(s) 622
BstC8I GCNNGC 4 cut(s) 112, 427, 890, 1079
BstDEI CTNAG 4 cut(s) 1202, 1337, 1397, 2183
BstF5I GGATG 8 cut(s) 10, 664, 765, 936, 1167, 1414, 1679, 1812
BstFNI CGCG 1 cut(s) 1760
BstH2I RGCGCY 1 cut(s) 23
BstHHI GCGC 1 cut(s) 22
BstKTI GATC 9 cut(s) 39, 1031, 1111, 1155, 1201, 1709, 1977, 2560, 2650
BstMAI GTCTC 5 cut(s) 85, 218, 1247, 2022, 2336
BstMBI GATC 9 cut(s) 36, 1028, 1108, 1152, 1198, 1706, 1974, 2557, 2647
BstMWI GCNNNNNNNGC 4 cut(s) 66, 107, 426, 566
BstNI CCWGG 1 cut(s) 1356
BstSCI CCNGG 2 cut(s) 939, 1354
BstSFI CTRYAG 2 cut(s) 169, 1305
BstSLI GKGCMC 3 cut(s) 583, 981, 2369
BstUI CGCG 1 cut(s) 1760
BstV1I GCAGC 8 cut(s) 88, 133, 237, 1068, 1784, 2280, 2283, 2634
BstV2I GAAGAC 4 cut(s) 631, 762, 2352, 2414
BstX2I RGATCY 5 cut(s) 1108, 1152, 1198, 1706, 2557
BstYI RGATCY 5 cut(s) 1108, 1152, 1198, 1706, 2557
BsuI GTATCC 2 cut(s) 937, 1686
BsuRI GGCC 1 cut(s) 1021
BtgZI GCGATG 1 cut(s) 2709
BtsCI GGATG 8 cut(s) 10, 664, 765, 936, 1167, 1414, 1679, 1812
BtsI GCAGTG 2 cut(s) 39, 2369
BtsIMutI CAGTG 7 cut(s) 39, 867, 1420, 1902, 1941, 2369, 2709
BveI ACCTGC 1 cut(s) 1567
Cac8I GCNNGC 4 cut(s) 112, 427, 890, 1079
CciI TCATGA 1 cut(s) 411
CfoI GCGC 1 cut(s) 22
Cfr10I RCCGGY 1 cut(s) 2583
Cfr13I GGNCC 5 cut(s) 465, 501, 1892, 1931, 2234
Csp6I GTAC 8 cut(s) 123, 871, 1725, 1734, 1868, 2084, 2475, 2659
CspAI ACCGGT 1 cut(s) 2583
CviQI GTAC 8 cut(s) 123, 871, 1725, 1734, 1868, 2084, 2475, 2659
DdeI CTNAG 4 cut(s) 1202, 1337, 1397, 2183
DpnI GATC 9 cut(s) 38, 1030, 1110, 1154, 1200, 1708, 1976, 2559, 2649
DpnII GATC 9 cut(s) 36, 1028, 1108, 1152, 1198, 1706, 1974, 2557, 2647
DraI TTTAAA 2 cut(s) 1011, 2118
EaeI YGGCCR 1 cut(s) 1019
Eam1104I CTCTTC 5 cut(s) 232, 265, 1086, 1947, 2567
EarI CTCTTC 5 cut(s) 232, 265, 1086, 1947, 2567
EciI GGCGGA 2 cut(s) 236, 617
Eco130I CCWWGG 1 cut(s) 1710
Eco31I GGTCTC 1 cut(s) 2022
Eco32I GATATC 2 cut(s) 1461, 1968
Eco47I GGWCC 5 cut(s) 465, 501, 1892, 1931, 2234
Eco57I CTGAAG 1 cut(s) 1340
EcoRI GAATTC 1 cut(s) 333
EcoRII CCWGG 1 cut(s) 1354
EcoRV GATATC 2 cut(s) 1461, 1968
EcoT14I CCWWGG 1 cut(s) 1710
EcoT22I ATGCAT 2 cut(s) 930, 2196
ErhI CCWWGG 1 cut(s) 1710
FalI AAGNNNNNCTT 4 cut(s) 713, 745, 2318, 2350
FaqI GGGAC 2 cut(s) 814, 2460
FblI GTMKAC 2 cut(s) 54, 550
FokI GGATG 8 cut(s) 17, 671, 752, 923, 1154, 1421, 1666, 1819
FspBI CTAG 6 cut(s) 246, 629, 773, 885, 1784, 2102
GlaI GCGC 1 cut(s) 21
GsaI CCCAGC 2 cut(s) 342, 1002
GsuI CTGGAG 2 cut(s) 555, 1097
HaeII RGCGCY 1 cut(s) 23
HaeIII GGCC 1 cut(s) 1021
HapII CCGG 2 cut(s) 940, 2584
HhaI GCGC 1 cut(s) 22
Hin6I GCGC 1 cut(s) 20
HinP1I GCGC 1 cut(s) 20
HincII GTYRAC 1 cut(s) 324
HindII GTYRAC 1 cut(s) 324
HindIII AAGCTT 3 cut(s) 1260, 1325, 2165
HinfI GANTC 5 cut(s) 458, 716, 857, 881, 2413
HpaII CCGG 2 cut(s) 940, 2584
HphI GGTGA 5 cut(s) 100, 373, 1774, 2012, 2407
Hpy166II GTNNAC 3 cut(s) 55, 324, 551
Hpy8I GTNNAC 3 cut(s) 55, 324, 551
Hpy99I CGWCG 1 cut(s) 819
HpyAV CCTTC 6 cut(s) 10, 387, 520, 1424, 1796, 2150
HpyCH4III ACNGT 7 cut(s) 652, 1488, 1502, 1674, 2285, 2658, 2704
HpyCH4IV ACGT 4 cut(s) 96, 1527, 1561, 2126
HpyF10VI GCNNNNNNNGC 4 cut(s) 66, 107, 426, 566
HpyF3I CTNAG 4 cut(s) 1202, 1337, 1397, 2183
HpySE526I ACGT 4 cut(s) 96, 1527, 1561, 2126
HspAI GCGC 1 cut(s) 20
Kzo9I GATC 9 cut(s) 36, 1028, 1108, 1152, 1198, 1706, 1974, 2557, 2647
LguI GCTCTTC 1 cut(s) 232
LmnI GCTCC 2 cut(s) 349, 1987
Lsp1109I GCAGC 8 cut(s) 88, 133, 237, 1068, 1784, 2280, 2283, 2634
LweI GCATC 9 cut(s) 216, 811, 915, 1582, 1867, 1969, 2181, 2321, 2686
MaeI CTAG 6 cut(s) 246, 629, 773, 885, 1784, 2102
MaeII ACGT 4 cut(s) 96, 1527, 1561, 2126
MaeIII GTNAC 8 cut(s) 1122, 1438, 1523, 1557, 1762, 1811, 1842, 2004
MalI GATC 9 cut(s) 38, 1030, 1110, 1154, 1200, 1708, 1976, 2559, 2649
MboI GATC 9 cut(s) 36, 1028, 1108, 1152, 1198, 1706, 1974, 2557, 2647
MfeI CAATTG 1 cut(s) 2339
MflI RGATCY 5 cut(s) 1108, 1152, 1198, 1706, 2557
MhlI GDGCHC 3 cut(s) 583, 981, 2369
MlsI TGGCCA 1 cut(s) 1021
MluNI TGGCCA 1 cut(s) 1021
MmeI TCCRAC 5 cut(s) 52, 793, 1929, 2355, 2662
Mox20I TGGCCA 1 cut(s) 1021
Mph1103I ATGCAT 2 cut(s) 930, 2196
MscI TGGCCA 1 cut(s) 1021
MslI CAYNNNNRTG 1 cut(s) 1820
Msp20I TGGCCA 1 cut(s) 1021
MspCI CTTAAG 1 cut(s) 2030
MspI CCGG 2 cut(s) 940, 2584
MspR9I CCNGG 2 cut(s) 941, 1356
MunI CAATTG 1 cut(s) 2339
Mva1269I GAATGC 5 cut(s) 429, 545, 1141, 1602, 1799
MvaI CCWGG 1 cut(s) 1356
MvnI CGCG 1 cut(s) 1760
MwoI GCNNNNNNNGC 4 cut(s) 66, 107, 426, 566
NciI CCSGG 1 cut(s) 941
NdeII GATC 9 cut(s) 36, 1028, 1108, 1152, 1198, 1706, 1974, 2557, 2647
NlaIV GGNNCC 1 cut(s) 2582
NmuCI GTSAC 4 cut(s) 1438, 1557, 1762, 1811
NsiI ATGCAT 2 cut(s) 930, 2196
NspV TTCGAA 1 cut(s) 622
PagI TCATGA 1 cut(s) 411
PciSI GCTCTTC 1 cut(s) 232
PctI GAATGC 5 cut(s) 429, 545, 1141, 1602, 1799
PfeI GAWTC 5 cut(s) 458, 716, 857, 881, 2413
PfoI TCCNGGA 1 cut(s) 939
PinAI ACCGGT 1 cut(s) 2583
Ppu21I YACGTR 1 cut(s) 97
PshBI ATTAAT 1 cut(s) 2025
PsiI TTATAA 1 cut(s) 1698
Psp1406I AACGTT 1 cut(s) 1527
Psp6I CCWGG 1 cut(s) 1354
PspFI CCCAGC 2 cut(s) 338, 998
PspGI CCWGG 1 cut(s) 1354
PspN4I GGNNCC 1 cut(s) 2582
PspPI GGNCC 5 cut(s) 465, 501, 1892, 1931, 2234
PsrI GAACNNNNNNTAC 2 cut(s) 1476, 1508
PsuI RGATCY 5 cut(s) 1108, 1152, 1198, 1706, 2557
RsaI GTAC 8 cut(s) 124, 872, 1726, 1735, 1869, 2085, 2476, 2660
RsaNI GTAC 8 cut(s) 123, 871, 1725, 1734, 1868, 2084, 2475, 2659
RseI CAYNNNNRTG 1 cut(s) 1820
SapI GCTCTTC 1 cut(s) 232
Sau3AI GATC 9 cut(s) 36, 1028, 1108, 1152, 1198, 1706, 1974, 2557, 2647
Sau96I GGNCC 5 cut(s) 465, 501, 1892, 1931, 2234
ScaI AGTACT 1 cut(s) 1869
ScrFI CCNGG 2 cut(s) 941, 1356
SduI GDGCHC 3 cut(s) 583, 981, 2369
SfaNI GCATC 9 cut(s) 216, 811, 915, 1582, 1867, 1969, 2181, 2321, 2686
SfcI CTRYAG 2 cut(s) 169, 1305
SfuI TTCGAA 1 cut(s) 622
SinI GGWCC 5 cut(s) 465, 501, 1892, 1931, 2234
SmiI ATTTAAAT 1 cut(s) 2118
SmiMI CAYNNNNRTG 1 cut(s) 1820
SmlI CTYRAG 3 cut(s) 1853, 1982, 2030
SmoI CTYRAG 3 cut(s) 1853, 1982, 2030
SsiI CCGC 7 cut(s) 66, 221, 243, 602, 1760, 2393, 2691
SspI AATATT 2 cut(s) 958, 2682
SspMI CTAG 6 cut(s) 246, 629, 773, 885, 1784, 2102
StyD4I CCNGG 2 cut(s) 939, 1354
StyI CCWWGG 1 cut(s) 1710
SwaI ATTTAAAT 1 cut(s) 2118
TaaI ACNGT 7 cut(s) 652, 1488, 1502, 1674, 2285, 2658, 2704
TaiI ACGT 4 cut(s) 99, 1530, 1564, 2129
TaqI TCGA 6 cut(s) 622, 814, 834, 1370, 2565, 2571
TatI WGTACW 3 cut(s) 1867, 2083, 2658
TauI GCSGC 3 cut(s) 69, 245, 2694
TfiI GAWTC 5 cut(s) 458, 716, 857, 881, 2413
TscAI CASTG 7 cut(s) 46, 867, 1420, 1902, 1941, 2369, 2709
TseFI GTSAC 4 cut(s) 1438, 1557, 1762, 1811
TseI GCWGC 8 cut(s) 101, 146, 250, 1081, 1797, 2293, 2296, 2622
Tsp45I GTSAC 4 cut(s) 1438, 1557, 1762, 1811
TspGWI ACGGA 1 cut(s) 403
TspRI CASTG 7 cut(s) 46, 867, 1420, 1902, 1941, 2369, 2709
Vha464I CTTAAG 1 cut(s) 2030
VpaK11BI GGWCC 5 cut(s) 465, 501, 1892, 1931, 2234
VspI ATTAAT 1 cut(s) 2025
XapI RAATTY 7 cut(s) 333, 1071, 1285, 1332, 1569, 2078, 2209
XbaI TCTAGA 1 cut(s) 2101
XmiI GTMKAC 2 cut(s) 54, 550
XspI CTAG 6 cut(s) 246, 629, 773, 885, 1784, 2102
ZrmI AGTACT 1 cut(s) 1869
Zsp2I ATGCAT 2 cut(s) 930, 2196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.