Rroxscaffold_1G00003940

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000379
Physical Location & Seq
Forward (+)
5253107 .. 5258704
5598 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00003940.1

Sequence Viewer

Length: 1536 bp
ATGGAGTTCTATTTCTTCCAGATGTCGTTGGCGATCATTGTGGTAATTGTGACATGGATCGGTTGCAAGGCCATTATTAAGTGGATAGGGACCCGAGTGGAGCGTTGGTCTTGGTTCAGTTATATGGTCCGAAAGTCGCAGGATAATCAAGTATTGGTTAACTTGGATACCTCTGAATCTCTTCCTTCATCATCAGCACCTCGTCCCTCGAAGTATGATGTGTTTTTGAGTTTCAGGGGTGCTGACACTCGCAAGGGGATTACAGTCGACATCCACGATCGACTAAAGGCGAGGGGAATTAAAACATTCATGGATGATCGAGATCTTGAAGTTGGGGATGCTATTTCTCCAACTCTCCTAAAGGCAATTGAAGAATCAAGGTTTGCAATTGTTGTTCTCTCGCGAGACTACGCTTCTTCTACTTGGTGTTTGGAGGAACTTGCAAAGATCTGTGAGTGCATGGAAGATCAGAACAGAATTCTTCCACTCTTTTATCACGTGGAGCCATCTGATGTTCGATTTCAGAAGAAAAGTTTTGAAGAAGCTTTCTCTAAACATGAAACCTCTAGGCGACACAAATCGGAGAAGATGAAGCAATGGAGAGATGCTTTAAACAAAGTGGCCTCTTTCTCTGGGTGGAATACACATGATTATAAGACTGAGAGAGGACTTGTCGAAGCCATTGTGGAACTTCTCAGCAGTAAAGTAGTACCCGATGCAATTGAGTCCACAGGAGATTTCGAAGTATTTGAAGCAACAAGACTAGCCATGGAGGAGGTTATGAAGGCCCTTAAAGATGACGAGGTCACTGCCGTCGGTGTCTACGGCATGGGAGGCGTCGGCAAAACAACCATGGTAAATCATGTCGCTGCACTATCCTGCAAAAATGGGACATTTCATCATGTGACTCTGGCTGTTGTATCCCAAAATCCTGATTTCAGAAGAGTTCAAGATGCATTGGCAGAGCTGCTGGGCTTCAAAATATATGAGAACACAGAAATTGGAAGAGCAGCTAGTTTGAGGAAGGAGATAATGAGGAGAGAAAAACTCCTTATAATCTTGGACGATGTTTGGGAGAGAATAGAGTTGTCAAAGATAGGGATTCCCAGCTACAAGGAGCTTCAAAAGTGCAGATCCAATGTCCTACTCACCACAAGGATATGGAATGTCTGTCATGCCATGGAGTGCCAAAGAAAGATCACCCTCAACGTTCTCTCAGAAGTCGATTCTTGGGCCTTGTTTGTGAGAAAAGCAAGAAGGTCTTTTGAATCGCCCACTTTCGAGGGTGTGGCAAAGAAGGTAGCTGGAGAATGTAGGGGTCTACCGATTGCATTGATAACAGTTGCAAGGGCACTTGGAGATAAAGAACCGGTGGAATGGAAAAGAGCTGCTCAACGACTAGAGAAGTCGCAGTCTGCCAACCCTGACGATAAGGGAGATGCATCCACATGTATAAAATTGAGCTATGATTACTTGAAAGATGAGGACTACAAGTCATACTTCTTGCTCTGTTGCTTTATTCCCAGAAGACTATGA

Protein Analysis

511

Amino Acids

58.41

Weight (kDa)

8.31

Isoelectric Point (pI)

43.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 71 - 237 1.1e-48 TIR domain
TIR_2 PF13676 74 - 169 1.3e-17 TIR domain
NB-ARC PF00931 257 - 418 8.4e-29 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000379)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17740 FvH4_1g17740 FvH4_1g17740 FvH4_1g17740 FvH4_3g42940 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43871 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43940 FvH4_3g43991 FvH4_3g44561 FvH4_3g44570 FvH4_3g44610 FvH4_3g44670 FvH4_3g44670 FvH4_3g44680 FvH4_3g44680 FvH4_3g44680 FvH4_3g45170 FvH4_3g45170 FvH4_3g45170 FvH4_3g45170 FvH4_3g45630 FvH4_3g45643 FvH4_3g45680 FvH4_3g45690 FvH4_3g45700 FvH4_3g45700 FvH4_3g45700 FvH4_3g45700 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730
malus_domestica MD11G1020200.v1.1 MD15G1398500.v1.1
rosa_chinensis RchiOBHm_Chr1g0326201 RchiOBHm_Chr5g0064091 RchiOBHm_Chr5g0076771 RchiOBHm_Chr5g0078181 RchiOBHm_Chr5g0078321 RchiOBHm_Chr5g0079331 RchiOBHm_Chr5g0079341 RchiOBHm_Chr5g0079351 RchiOBHm_Chr5g0079361 RchiOBHm_Chr5g0079441 RchiOBHm_Chr5g0079821 RchiOBHm_Chr5g0080071 RchiOBHm_Chr7g0212731 RchiOBHm_Chr7g0224201
rosa_laevigata RLG00000002871
rosa_multiflora Rmu_co8378879.1_g000001 Rmu_co8466133.1_g000001 Rmu_sc0000595.1_g000019 Rmu_sc0000616.1_g000025 Rmu_sc0000631.1_g000033 Rmu_sc0000945.1_g000004 Rmu_sc0001148.1_g000022 Rmu_sc0001226.1_g000016 Rmu_sc0002187.1_g000037 Rmu_sc0006084.1_g000005 Rmu_sc0006084.1_g000009 Rmu_sc0006084.1_g000019 Rmu_sc0006084.1_g000021
rosa_roxburghii Rroxscaffold_1G00001540 Rroxscaffold_1G00003210 Rroxscaffold_1G00003250 Rroxscaffold_1G00003340 Rroxscaffold_1G00003580 Rroxscaffold_1G00003940 Rroxscaffold_3G00228660 Rroxscaffold_3G00247850
rosa_rugosa Rorug05G0465800 Rorug05G0466100 Rorug07G0125700 Rorug07G0136300
rosa_wichuraiana Rw0G005160 Rw0G022760 Rw5G047710 Rw5G048070 Rw5G048080 Rw5G048150 Rw5G048180 Rw5G048210 Rw5G048250 Rw5G048290 Rw7G023250 Rw7G030960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 654, 1055
AccI GTMKAC 3 cut(s) 267, 822, 1321
AccII CGCG 1 cut(s) 403
AclI AACGTT 1 cut(s) 1209
AclWI GGATC 2 cut(s) 65, 1128
AcsI RAATTY 1 cut(s) 477
AcvI CACGTG 1 cut(s) 499
AcyI GRCGYC 1 cut(s) 837
AfaI GTAC 1 cut(s) 711
AflIII ACRYGT 1 cut(s) 1448
AgeI ACCGGT 1 cut(s) 1369
AgsI TTSAA 9 cut(s) 329, 371, 539, 752, 950, 979, 1124, 1268, 1477
AhdI GACNNNNNGTC 1 cut(s) 1492
AluBI AGCT 8 cut(s) 545, 967, 1013, 1110, 1120, 1304, 1388, 1464
AluI AGCT 8 cut(s) 545, 967, 1013, 1110, 1120, 1304, 1388, 1464
Alw26I GTCTC 1 cut(s) 399
AlwI GGATC 2 cut(s) 65, 1128
Ama87I CYCGRG 1 cut(s) 93
AoxI GGCC 4 cut(s) 69, 621, 786, 1233
ApeKI GCWGC 4 cut(s) 869, 967, 1010, 1388
ApoI RAATTY 1 cut(s) 477
AsiGI ACCGGT 1 cut(s) 1369
Asp700I GAANNNNTTC 1 cut(s) 180
AspS9I GGNCC 4 cut(s) 90, 127, 787, 1233
AsuHPI GGTGA 2 cut(s) 1141, 1192
AsuII TTCGAA 1 cut(s) 741
AvaI CYCGRG 1 cut(s) 93
AvaII GGWCC 2 cut(s) 90, 127
BaeGI GKGCMC 1 cut(s) 1354
BbrPI CACGTG 1 cut(s) 499
BbvI GCAGC 4 cut(s) 856, 954, 1022, 1375
BccI CCATC 1 cut(s) 514
BceAI ACGGC 2 cut(s) 797, 841
BcgI CGANNNNNNTGC 2 cut(s) 791, 825
BciVI GTATCC 2 cut(s) 160, 931
BcoDI GTCTC 1 cut(s) 399
BfaI CTAG 4 cut(s) 567, 764, 1014, 1400
BfuI GTATCC 2 cut(s) 160, 931
BglII AGATCT 2 cut(s) 322, 447
BisI GCNGC 4 cut(s) 870, 968, 1011, 1389
BlsI GCNGC 4 cut(s) 871, 969, 1012, 1390
Bme18I GGWCC 2 cut(s) 90, 127
BmeRI GACNNNNNGTC 1 cut(s) 1492
BmeT110I CYCGRG 1 cut(s) 93
BmgT120I GGNCC 4 cut(s) 90, 127, 787, 1233
BmiI GGNNCC 3 cut(s) 91, 92, 504
BmsI GCATC 6 cut(s) 328, 595, 706, 943, 1429, 1451
BplI GAGNNNNNCTC 2 cut(s) 1032, 1064
BpmI CTGGAG 1 cut(s) 1326
Bpu14I TTCGAA 1 cut(s) 741
BsaAI YACGTR 1 cut(s) 499
BsaBI GATNNNNATC 1 cut(s) 321
BsaHI GRCGYC 1 cut(s) 837
BsaJI CCNNGG 3 cut(s) 768, 852, 1179
BsaWI WCCGGW 1 cut(s) 1369
BsaXI ACNNNNNCTCC 2 cut(s) 92, 122
Bse118I RCCGGY 1 cut(s) 1369
Bse3DI GCAATG 1 cut(s) 602
Bse8I GATNNNNATC 1 cut(s) 321
BseDI CCNNGG 3 cut(s) 768, 852, 1179
BseGI GGATG 4 cut(s) 270, 319, 343, 1442
BseJI GATNNNNATC 1 cut(s) 321
BseMI GCAATG 1 cut(s) 602
BseMII CTCAG 3 cut(s) 651, 709, 1230
BseRI GAGGAG 2 cut(s) 788, 1051
BseSI GKGCMC 1 cut(s) 1354
BseXI GCAGC 4 cut(s) 856, 954, 1022, 1375
BseYI CCCAGC 2 cut(s) 970, 1106
BsgI GTGCAG 2 cut(s) 855, 1150
Bsh1236I CGCG 1 cut(s) 403
Bsh1285I CGRYCG 1 cut(s) 280
BshFI GGCC 4 cut(s) 71, 623, 788, 1235
BshTI ACCGGT 1 cut(s) 1369
BsiEI CGRYCG 1 cut(s) 280
BsiHKCI CYCGRG 1 cut(s) 93
BsiSI CCGG 1 cut(s) 1370
BslFI GGGAC 3 cut(s) 103, 189, 904
BsmAI GTCTC 1 cut(s) 399
BsmFI GGGAC 3 cut(s) 103, 189, 904
BsnI GGCC 4 cut(s) 71, 623, 788, 1235
BsoBI CYCGRG 1 cut(s) 93
Bsp119I TTCGAA 1 cut(s) 741
Bsp1286I GDGCHC 1 cut(s) 1354
Bsp143I GATC 9 cut(s) 33, 57, 277, 316, 322, 447, 466, 1133, 1197
Bsp19I CCATGG 3 cut(s) 768, 852, 1179
Bsp68I TCGCGA 1 cut(s) 403
BspANI GGCC 4 cut(s) 71, 623, 788, 1235
BspCNI CTCAG 3 cut(s) 652, 708, 1229
BspFNI CGCG 1 cut(s) 403
BspLI GGNNCC 3 cut(s) 91, 92, 504
BspPI GGATC 2 cut(s) 65, 1128
BspQI GCTCTTC 1 cut(s) 1000
BspT104I TTCGAA 1 cut(s) 741
BsrDI GCAATG 1 cut(s) 602
BsrFI RCCGGY 1 cut(s) 1369
BssAI RCCGGY 1 cut(s) 1369
BssECI CCNNGG 3 cut(s) 768, 852, 1179
BssMI GATC 9 cut(s) 33, 57, 277, 316, 322, 447, 466, 1133, 1197
BssNI GRCGYC 1 cut(s) 837
BssT1I CCWWGG 3 cut(s) 768, 852, 1179
Bst4CI ACNGT 2 cut(s) 265, 1342
Bst6I CTCTTC 3 cut(s) 186, 937, 1000
BstACI GRCGYC 1 cut(s) 837
BstBAI YACGTR 1 cut(s) 499
BstBI TTCGAA 1 cut(s) 741
BstDEI CTNAG 3 cut(s) 660, 695, 1216
BstDSI CCRYGG 3 cut(s) 768, 852, 1179
BstF5I GGATG 4 cut(s) 270, 319, 343, 1442
BstFNI CGCG 1 cut(s) 403
BstKTI GATC 9 cut(s) 36, 60, 280, 319, 325, 450, 469, 1136, 1200
BstMAI GTCTC 1 cut(s) 399
BstMBI GATC 9 cut(s) 33, 57, 277, 316, 322, 447, 466, 1133, 1197
BstMCI CGRYCG 1 cut(s) 280
BstMWI GCNNNNNNNGC 1 cut(s) 834
BstNSI RCATGY 1 cut(s) 1452
BstSLI GKGCMC 1 cut(s) 1354
BstUI CGCG 1 cut(s) 403
BstV1I GCAGC 4 cut(s) 856, 954, 1022, 1375
BstX2I RGATCY 3 cut(s) 322, 447, 1133
BstYI RGATCY 3 cut(s) 322, 447, 1133
BsuI GTATCC 2 cut(s) 160, 931
BsuRI GGCC 4 cut(s) 71, 623, 788, 1235
BtgI CCRYGG 3 cut(s) 768, 852, 1179
BtsCI GGATG 4 cut(s) 270, 319, 343, 1442
BtsI GCAGTG 1 cut(s) 807
BtsIMutI CAGTG 1 cut(s) 807
BtuMI TCGCGA 1 cut(s) 403
Cfr10I RCCGGY 1 cut(s) 1369
Cfr13I GGNCC 4 cut(s) 90, 127, 787, 1233
CseI GACGC 1 cut(s) 826
Csp6I GTAC 1 cut(s) 710
CspAI ACCGGT 1 cut(s) 1369
CviQI GTAC 1 cut(s) 710
DdeI CTNAG 3 cut(s) 660, 695, 1216
DpnI GATC 9 cut(s) 35, 59, 279, 318, 324, 449, 468, 1135, 1199
DpnII GATC 9 cut(s) 33, 57, 277, 316, 322, 447, 466, 1133, 1197
DraI TTTAAA 1 cut(s) 612
DriI GACNNNNNGTC 1 cut(s) 1492
Eam1104I CTCTTC 3 cut(s) 186, 937, 1000
Eam1105I GACNNNNNGTC 1 cut(s) 1492
EarI CTCTTC 3 cut(s) 186, 937, 1000
Eco130I CCWWGG 3 cut(s) 768, 852, 1179
Eco47I GGWCC 2 cut(s) 90, 127
Eco72I CACGTG 1 cut(s) 499
Eco88I CYCGRG 1 cut(s) 93
EcoO109I RGGNCCY 2 cut(s) 90, 787
EcoRI GAATTC 1 cut(s) 477
EcoT14I CCWWGG 3 cut(s) 768, 852, 1179
EcoT22I ATGCAT 2 cut(s) 958, 1444
ErhI CCWWGG 3 cut(s) 768, 852, 1179
FalI AAGNNNNNCTT 4 cut(s) 1246, 1278, 1484, 1516
FaqI GGGAC 3 cut(s) 103, 189, 904
FblI GTMKAC 3 cut(s) 267, 822, 1321
Fnu4HI GCNGC 4 cut(s) 870, 968, 1011, 1389
FokI GGATG 4 cut(s) 257, 326, 350, 1429
Fsp4HI GCNGC 4 cut(s) 870, 968, 1011, 1389
FspBI CTAG 4 cut(s) 567, 764, 1014, 1400
GluI GCNGC 4 cut(s) 870, 968, 1011, 1389
GsaI CCCAGC 2 cut(s) 974, 1110
GsuI CTGGAG 1 cut(s) 1326
HaeIII GGCC 4 cut(s) 71, 623, 788, 1235
HapII CCGG 1 cut(s) 1370
HgaI GACGC 1 cut(s) 826
Hin1I GRCGYC 1 cut(s) 837
HincII GTYRAC 2 cut(s) 160, 268
HindII GTYRAC 2 cut(s) 160, 268
HindIII AAGCTT 1 cut(s) 543
HinfI GANTC 7 cut(s) 176, 374, 725, 907, 1102, 1226, 1268
HpaI GTTAAC 1 cut(s) 160
HpaII CCGG 1 cut(s) 1370
HphI GGTGA 2 cut(s) 1141, 1192
Hpy166II GTNNAC 5 cut(s) 160, 268, 729, 823, 1322
Hpy188I TCNGA 8 cut(s) 131, 175, 471, 511, 525, 583, 941, 1219
Hpy188III TCNNGA 6 cut(s) 19, 320, 326, 402, 932, 950
Hpy8I GTNNAC 5 cut(s) 160, 268, 729, 823, 1322
Hpy99I CGWCG 2 cut(s) 818, 842
HpyAV CCTTC 5 cut(s) 195, 778, 1018, 1251, 1291
HpyCH4III ACNGT 2 cut(s) 265, 1342
HpyCH4IV ACGT 2 cut(s) 498, 1209
HpyF10VI GCNNNNNNNGC 1 cut(s) 834
HpyF3I CTNAG 3 cut(s) 660, 695, 1216
HpySE526I ACGT 2 cut(s) 498, 1209
Hsp92I GRCGYC 1 cut(s) 837
KflI GGGWCCC 1 cut(s) 90
KspAI GTTAAC 1 cut(s) 160
Kzo9I GATC 9 cut(s) 33, 57, 277, 316, 322, 447, 466, 1133, 1197
LguI GCTCTTC 1 cut(s) 1000
LmnI GCTCC 3 cut(s) 100, 502, 1117
Lsp1109I GCAGC 4 cut(s) 856, 954, 1022, 1375
LweI GCATC 6 cut(s) 328, 595, 706, 943, 1429, 1451
MaeI CTAG 4 cut(s) 567, 764, 1014, 1400
MaeII ACGT 2 cut(s) 498, 1209
MaeIII GTNAC 3 cut(s) 49, 805, 904
MalI GATC 9 cut(s) 35, 59, 279, 318, 324, 449, 468, 1135, 1199
MboI GATC 9 cut(s) 33, 57, 277, 316, 322, 447, 466, 1133, 1197
MfeI CAATTG 3 cut(s) 366, 387, 720
MflI RGATCY 3 cut(s) 322, 447, 1133
MhlI GDGCHC 1 cut(s) 1354
MluCI AATT 8 cut(s) 45, 297, 366, 387, 477, 720, 999, 1457
MlyI GAGTC 2 cut(s) 734, 901
MmeI TCCRAC 1 cut(s) 374
Mph1103I ATGCAT 2 cut(s) 958, 1444
MroXI GAANNNNTTC 1 cut(s) 180
MseI TTAA 5 cut(s) 78, 159, 300, 611, 792
MslI CAYNNNNRTG 1 cut(s) 1447
MspI CCGG 1 cut(s) 1370
MunI CAATTG 3 cut(s) 366, 387, 720
MvnI CGCG 1 cut(s) 403
MwoI GCNNNNNNNGC 1 cut(s) 834
NcoI CCATGG 3 cut(s) 768, 852, 1179
NdeII GATC 9 cut(s) 33, 57, 277, 316, 322, 447, 466, 1133, 1197
NlaIV GGNNCC 3 cut(s) 91, 92, 504
NmuCI GTSAC 3 cut(s) 49, 805, 904
NruI TCGCGA 1 cut(s) 403
NsiI ATGCAT 2 cut(s) 958, 1444
NspI RCATGY 1 cut(s) 1452
NspV TTCGAA 1 cut(s) 741
PciI ACATGT 1 cut(s) 1448
PciSI GCTCTTC 1 cut(s) 1000
PcsI WCGNNNNNNNCGW 1 cut(s) 273
PdmI GAANNNNTTC 1 cut(s) 180
PfeI GAWTC 5 cut(s) 176, 374, 1102, 1226, 1268
PflFI GACNNNGTC 1 cut(s) 803
PinAI ACCGGT 1 cut(s) 1369
PkrI GCNGC 4 cut(s) 871, 969, 1012, 1390
Ple19I CGATCG 1 cut(s) 280
PleI GAGTC 2 cut(s) 733, 901
PmaCI CACGTG 1 cut(s) 499
PmlI CACGTG 1 cut(s) 499
PpsI GAGTC 2 cut(s) 733, 901
Ppu21I YACGTR 1 cut(s) 499
PpuMI RGGWCCY 1 cut(s) 90
PscI ACATGT 1 cut(s) 1448
PsiI TTATAA 2 cut(s) 654, 1055
Psp1406I AACGTT 1 cut(s) 1209
Psp5II RGGWCCY 1 cut(s) 90
PspCI CACGTG 1 cut(s) 499
PspFI CCCAGC 2 cut(s) 970, 1106
PspN4I GGNNCC 3 cut(s) 91, 92, 504
PspPI GGNCC 4 cut(s) 90, 127, 787, 1233
PspPPI RGGWCCY 1 cut(s) 90
PsuI RGATCY 3 cut(s) 322, 447, 1133
PsyI GACNNNGTC 1 cut(s) 803
PvuI CGATCG 1 cut(s) 280
RruI TCGCGA 1 cut(s) 403
RsaI GTAC 1 cut(s) 711
RsaNI GTAC 1 cut(s) 710
RseI CAYNNNNRTG 1 cut(s) 1447
SalI GTCGAC 1 cut(s) 266
SapI GCTCTTC 1 cut(s) 1000
SaqAI TTAA 5 cut(s) 78, 159, 300, 611, 792
SatI GCNGC 4 cut(s) 870, 968, 1011, 1389
Sau3AI GATC 9 cut(s) 33, 57, 277, 316, 322, 447, 466, 1133, 1197
Sau96I GGNCC 4 cut(s) 90, 127, 787, 1233
SchI GAGTC 2 cut(s) 734, 901
SduI GDGCHC 1 cut(s) 1354
SfaNI GCATC 6 cut(s) 328, 595, 706, 943, 1429, 1451
SfuI TTCGAA 1 cut(s) 741
SinI GGWCC 2 cut(s) 90, 127
SmiMI CAYNNNNRTG 1 cut(s) 1447
Sse9I AATT 8 cut(s) 45, 297, 366, 387, 477, 720, 999, 1457
SspMI CTAG 4 cut(s) 567, 764, 1014, 1400
StyI CCWWGG 3 cut(s) 768, 852, 1179
TaaI ACNGT 2 cut(s) 265, 1342
TaiI ACGT 2 cut(s) 501, 1212
TaqI TCGA 9 cut(s) 209, 267, 280, 319, 517, 675, 741, 1224, 1281
TasI AATT 8 cut(s) 45, 297, 366, 387, 477, 720, 999, 1457
TfiI GAWTC 5 cut(s) 176, 374, 1102, 1226, 1268
Tru1I TTAA 5 cut(s) 78, 159, 300, 611, 792
Tru9I TTAA 5 cut(s) 78, 159, 300, 611, 792
TscAI CASTG 1 cut(s) 814
TseFI GTSAC 3 cut(s) 49, 805, 904
TseI GCWGC 4 cut(s) 869, 967, 1010, 1388
Tsp45I GTSAC 3 cut(s) 49, 805, 904
TspDTI ATGAA 6 cut(s) 177, 298, 573, 605, 797, 887
TspRI CASTG 1 cut(s) 814
Tth111I GACNNNGTC 1 cut(s) 803
VpaK11BI GGWCC 2 cut(s) 90, 127
XapI RAATTY 1 cut(s) 477
XceI RCATGY 1 cut(s) 1452
XmiI GTMKAC 3 cut(s) 267, 822, 1321
XmnI GAANNNNTTC 1 cut(s) 180
XspI CTAG 4 cut(s) 567, 764, 1014, 1400
Zsp2I ATGCAT 2 cut(s) 958, 1444
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.