Rw5G048210

Disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
83717675 .. 83722632
4958 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G048210.1

Sequence Viewer

Length: 3855 bp
ATGTCGGACTATCTTCACTCTCCGGCTGTAGAGCCGTTTAGTCAACAGTCGCTGCTGCCGCGGCTCCAGGCGCTGATCGAGGGCGCCGGGGAGAGCTGGACCTATGCCATCTTCTGGCAGTCGTCGTACGACATGTCGGGAGATTCCGTTCTCGGGTGGGGCGACGGGTTCTACAAGGACGAGAGTGATAAATGGAAAGCGAGGCCCAAAAAGATGACGTCATTAGTCGAGCAGGAGTACCGGAAGAAAGTGTTCAGGGACCTCAACTCTTTGATTTCCGGGACCGACACCACCGCCGACGACGAGGTCGTAGATCAAGTCACTGGTACAGAATGGTTCTTCCTTGTTTCCACGACCCATAGTTTCCTCAACGGCGGCGGGTTGCCGGGTCAGGCCTTTTTCTATTCCAACCCGGTCTGGGTCACCGGGCCGGACCGCCTAGCGGCGTCCTCCTGCGAGCGGGCCCGCCAAGCTCAGGTCTCCGGCCTACAGACTATGGTCTGCGTCCCGACGGCGAATGGGGTGGTCGAATTGGGCTCGACGGAGCTGATATTCCAGAGCTCGGATGTGATGAACGAGGCCCGAGTATTGTTTGATTTCAATAATCTTGAAGTCGGTTCTTGGCCTGTAGCTCCGGCCACTTCAGGACCGAGTAGCAGTAACCATCACATCTCTAAGCCGATTCAGTTTGACAACCACCCTAGTTCCAGTAGCTCTTCTGCTACTCAGTGGAAGTATGATGTGTTTTTGAGTTTCAGGGGTCCTGACACTCGAAGGAGTATTGTATCTGATTTATACGATCGGCTGCAAAACAAGAGAGGAATTAGAACATTTATGGATGATCCAGATCTTCGAGTAGGGGATGCTATTTCTCCCGCTCTCTTAAAGGCGATTGAAGAATCAAGAATTCTTCCACTTTTCTATAATGTGGAACCCTCTGATGTAAGGTACCGGAAAAGGAGTTTCCGAAGAGCTTTCAATAAGCATGAACGCTCTGGGCGACACACATCAGAGAAGGTGCAGCGGTGGAATGATGCGTTAAACAAAGTGGCCAGTTTTTCTGGGTGGCATACAAAGAATTTTAAGAGTGATAGAGATCTTGTTGACTCCATTGTGGAATTTGTGTGCAGTAAAGTACAACCTATTGAAATCGGGTTTACAATGTTCGCCGGAGATTTTCAAGCATTTGAAGCAACAAGAAAAAGCATGAATGAGGTTATGAAGGCGCTTCAAGATGACGAGGTCACTGCCCTTGGGGTCTATGGAATGGGAGGGGTCGGCAAGACAACCATGGTTAAACGTGTCGGTGCGCTAGCCCGCAAGAATGGAATTTTTAACCATGTACTTCTGGCTGTCATATCCCAAAGCCCTGACTCGAGAAATATTCAAGCCACATTGGCAGAGCTGCTGGGCTTCAAATTCAAGTGGGAGACAGAAATTGGAAGAGCCGCTGAGTTGCATGAGAAGATAATGAGTAAAAATAAGATCCTTATAATCCTGGACGACATGTGGGAGAGAATGGATTTGTCAAGAATAGGAATTCCCAGCTATGACGAGCTCAAAAAATACAATTCTAAAGTCCTACTCACCACGAGGAGATTGCATGTTTGTAATTCCATGGACAGCCAAGCAAGCATTCCTCTCGATATCTTATCAGAAGAAGATTCTTGGAAATTGTTTATGAGAAATGCAGGAAGGTCTTTTGAATCCTCCAATTTTAATAACGTAGCAAGAAAGGTAGCTGCAGAATGTAGGGGTCTACCAATTGCATTGATAGCAGTTGCAAGGGCACTCAGAGATAAAGATCTGGCGGAATGGCAAAAAGCAGCTCAACGACTGGAGAAGTCGCAAATTGCCAACCCTGATGATAAGGGAGATGCATTCGAATGTATAAAATTAAGCTTTGATTACTTGAAAGATGAGGACCACAAGTCATGCTTCTTGCTCTGTTGCCTATTCCCAGAAGACCATGAAATCAATATAGAAGACTTGTTCAGGTATGCGATTGGAAAAGGATTGTTTCAAGATGCCGAAACAATGTACGAAGCCAGAGGAACAGCAGATTCAGTGGTCAAGTACCTGAAAGATTCTAGCTTGCTTTTGGAGAGTGAATACATTGGATGTGTAAAGATGCATGATGTCATCCGGGATACAGCCATGAATATTGCAAAATCTAAAGATGGGCATCGGTTTACGGTAAAAGTTGGCTGTGGTTTAGAGGATTGGCGGCCACGCGGATTACATGAAGGCTGCACTGCTATTTCACTAATGAGGAACAAAATTCGCAAGCTACCCGAAGAAGAGTTGGTATGTCCAAATCTCCAGCTTTTATTACTAAAACAGAATGCTGATTTAAATGAGATCCCAGAAAAGTTTATCCAAAATCTGAATAAATTAAGGCTCTTGGATCTTAGCAACACTAGTATTTCCGTATTACCCCAATCATTCAGTCTCCTTACCAACCTTCAAGCTTTGAATTTAGATTTTTGCGAGCAATTGATTGACATATCCGTAGTGGGAAAACTTAAGAAGCTTGAAATTCTTAGTATGAGACAATGTCCTCTCAAGAAACTGTCGAGAGAAATAGGACATTTGACCAATCTAAGAATTTTGGATGTCAGTTCCGCTGAATTTCTCATAATTCCACCTAAAGTGATACCGAAGTTGCATAAATTAGAAGAACTGTATATACTAAACTGTGGATTTGAGGATTGGGGGAGTGAAGTTGAGAGAGAAGGAGAAGAAACTGAATTGGTTTTCCCTGTTTTGTCAAATTTGAAAAATTGGCAGGTTTGCATATCTGATGCTAAATGCACACCTAAATGTCTTGAGGTCAATGGAGAATATCATAATTCAAGATCCTTGTTTCTTAATGGAGCAACCATAAGTACCTTACCTGACTGGTTTATCAACACAGTGACAAAGAAAACAGAGAAGCTAGAGTACAGTCGCTGCAAAGGGATGAGTGACATTCTTATGGAATATGACCATGGGAGGTTACATAAGCTCAAGCATCTTAGAGTATGTGGTTATTTTTGTGATTCCTATGTGTACTTGAAGGAGTTGATGAACACAACAAGACGAGTTCAAAAAGGACCAGTGTTTGTGAATTTGGAAGAGTTGCATCTGATAGATCTGATCCACCTTAATGAGTTGTGTGTTGGAGAGTTACCACATGGGTCTCTCTTCAATCTGAAGGTATTGCATATATCTTTTTGTAATATTTTGAAGAATGTATCAAAACTGGTACAGAGACTACCAAATCTGGAGAGACTATATTTAAATTGCATGGATGACCTGGAATATGTGTTTGGATGTGAAGGGTTTGAGCCGAAAGAATCAAAACTGAGAGAGATGCAGTTGTTGGGTCCAAATTCAGTGAAGAGCATTTGTAGTGGTCCTGCCCCACGCGTAATGTTCCAGAGTCTTAAAAGTTTGACTTTTTACCGTTGCGAGTTGCTGCAAAGTCTGTTCGCATATGATGTAGCCCAGAATCTTGTTCAATTGGAAGACCTTTTAGTAGAATGGTGCCCTTTGTTGGTAAGAGTAATTGAAGCAGTGAACAACGAGAAGGCTACGGTTCTTCGAAGAATGAAGAACTTGGTTTTCATGGGACTTCCCAAGTTGTATGGTGCAAGTGCTACTGTTGACATTGAGTGTCCTTCATTAGAACACTTGATTGTGGTTGATTGTCCCCGGTTTTCATTTTCAACCTCTTCCTTAAGCAGGAACCCGTCTTCATTTTCAACCTCTGCTTCCGACTACTTTGGCAGCACCAACCTAGTCAAACTCAATGATCAACAACATCTTCAACTTCTATCATCAAGGTTGATGAACTTGTACAGGCTCAGTTAA

Protein Analysis

1284

Amino Acids

145.57

Weight (kDa)

6.33

Isoelectric Point (pI)

45.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bHLH-MYC_N PF14215 21 - 198 1.4e-50 bHLH-MYC and R2R3-MYB transcription factors N-terminal
TIR PF01582 245 - 303 5.3e-14 TIR domain
TIR PF01582 303 - 379 2.2e-10 TIR domain
NB-ARC PF00931 401 - 565 1.2e-28 NB-ARC domain
LRR_14 PF23598 772 - 973 3e-13 Leucine-rich repeat region
LRR_8 PF13855 772 - 830 2.6e-07 Leucine rich repeat
LRR_RPS2 PF23247 1038 - 1177 4.4e-16 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000379)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17740 FvH4_1g17740 FvH4_1g17740 FvH4_1g17740 FvH4_3g42940 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43871 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43940 FvH4_3g43991 FvH4_3g44561 FvH4_3g44570 FvH4_3g44610 FvH4_3g44670 FvH4_3g44670 FvH4_3g44680 FvH4_3g44680 FvH4_3g44680 FvH4_3g45170 FvH4_3g45170 FvH4_3g45170 FvH4_3g45170 FvH4_3g45630 FvH4_3g45643 FvH4_3g45680 FvH4_3g45690 FvH4_3g45700 FvH4_3g45700 FvH4_3g45700 FvH4_3g45700 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730
malus_domestica MD11G1020200.v1.1 MD15G1398500.v1.1
rosa_chinensis RchiOBHm_Chr1g0326201 RchiOBHm_Chr5g0064091 RchiOBHm_Chr5g0076771 RchiOBHm_Chr5g0078181 RchiOBHm_Chr5g0078321 RchiOBHm_Chr5g0079331 RchiOBHm_Chr5g0079341 RchiOBHm_Chr5g0079351 RchiOBHm_Chr5g0079361 RchiOBHm_Chr5g0079441 RchiOBHm_Chr5g0079821 RchiOBHm_Chr5g0080071 RchiOBHm_Chr7g0212731 RchiOBHm_Chr7g0224201
rosa_laevigata RLG00000002871
rosa_multiflora Rmu_co8378879.1_g000001 Rmu_co8466133.1_g000001 Rmu_sc0000595.1_g000019 Rmu_sc0000616.1_g000025 Rmu_sc0000631.1_g000033 Rmu_sc0000945.1_g000004 Rmu_sc0001148.1_g000022 Rmu_sc0001226.1_g000016 Rmu_sc0002187.1_g000037 Rmu_sc0006084.1_g000005 Rmu_sc0006084.1_g000009 Rmu_sc0006084.1_g000019 Rmu_sc0006084.1_g000021
rosa_roxburghii Rroxscaffold_1G00001540 Rroxscaffold_1G00003210 Rroxscaffold_1G00003250 Rroxscaffold_1G00003340 Rroxscaffold_1G00003580 Rroxscaffold_1G00003940 Rroxscaffold_3G00228660 Rroxscaffold_3G00247850
rosa_rugosa Rorug05G0465800 Rorug05G0466100 Rorug07G0125700 Rorug07G0136300
rosa_wichuraiana Rw0G005160 Rw0G022760 Rw5G047710 Rw5G048070 Rw5G048080 Rw5G048150 Rw5G048180 Rw5G048210 Rw5G048250 Rw5G048290 Rw7G023250 Rw7G030960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1493
AasI GACNNNNNNGTC 1 cut(s) 305
AatII GACGTC 1 cut(s) 221
Acc36I ACCTGC 1 cut(s) 2779
Acc65I GGTACC 1 cut(s) 948
AccB1I GGYRCC 3 cut(s) 83, 948, 3528
AccB7I CCANNNNNTGG 1 cut(s) 114
AccBSI CCGCTC 2 cut(s) 460, 878
AccI GTMKAC 1 cut(s) 1759
AccII CGCG 3 cut(s) 61, 2235, 3411
AclWI GGATC 6 cut(s) 836, 1480, 2356, 2415, 2853, 3133
AcoI YGGCCR 3 cut(s) 636, 1050, 2228
AcuI CTGAAG 2 cut(s) 627, 3215
AcyI GRCGYC 3 cut(s) 84, 218, 446
AfiI CCNNNNNNNGG 9 cut(s) 114, 153, 418, 442, 459, 475, 562, 3538, 3726
AflII CTTAAG 2 cut(s) 2525, 3721
AflIII ACRYGT 4 cut(s) 132, 1300, 1506, 3409
AhdI GACNNNNNGTC 1 cut(s) 1930
AhlI ACTAGT 1 cut(s) 2420
AjnI CCWGG 3 cut(s) 66, 1497, 3297
AjuI GAANNNNNNNTTGG 4 cut(s) 1620, 1652, 3294, 3326
AloI GAACNNNNNNTCC 2 cut(s) 132, 164
Alw21I GWGCWC 2 cut(s) 563, 1560
Alw26I GTCTC 7 cut(s) 484, 1424, 2456, 2545, 3186, 3247, 3265
AlwI GGATC 6 cut(s) 836, 1480, 2356, 2415, 2853, 3133
AlwNI CAGNNNCTG 3 cut(s) 52, 73, 2952
Ama87I CYCGRG 3 cut(s) 152, 582, 1375
ApaI GGGCCC 1 cut(s) 466
Asp700I GAANNNNTTC 1 cut(s) 251
Asp718I GGTACC 1 cut(s) 948
AspLEI GCGC 4 cut(s) 73, 86, 1228, 1312
AsuC2I CCSGG 7 cut(s) 88, 280, 387, 413, 427, 2147, 3697
AsuHPI GGTGA 2 cut(s) 415, 1579
AsuII TTCGAA 2 cut(s) 1884, 3586
AsuNHI GCTAGC 1 cut(s) 1312
AvaI CYCGRG 3 cut(s) 152, 582, 1375
BaeGI GKGCMC 3 cut(s) 466, 1792, 3533
BaeI ACNNNNGTAYC 2 cut(s) 2648, 2681
BalI TGGCCA 1 cut(s) 1052
BanI GGYRCC 3 cut(s) 83, 948, 3528
BanII GRGCYC 4 cut(s) 466, 539, 563, 1560
BarI GAAGNNNNNNTAC 2 cut(s) 2927, 2959
BauI CACGAG 1 cut(s) 1591
BbsI GAAGAC 4 cut(s) 1971, 1992, 3516, 3729
Bbv12I GWGCWC 2 cut(s) 563, 1560
BccI CCATC 3 cut(s) 116, 672, 2174
BceAI ACGGC 3 cut(s) 19, 388, 528
BcgI CGANNNNNNTGC 6 cut(s) 1229, 1263, 1582, 1616, 1624, 1658
BciT130I CCWGG 3 cut(s) 68, 1499, 3299
BciVI GTATCC 1 cut(s) 2143
BclI TGATCA 1 cut(s) 3796
BcnI CCSGG 7 cut(s) 88, 280, 387, 413, 427, 2147, 3697
BcoDI GTCTC 7 cut(s) 484, 1424, 2456, 2545, 3186, 3247, 3265
BcuI ACTAGT 1 cut(s) 2420
BfaI CTAG 7 cut(s) 440, 702, 1313, 2091, 2421, 2939, 3782
BfmI CTRYAG 4 cut(s) 27, 488, 627, 1743
BfoI RGCGCY 3 cut(s) 74, 87, 1229
BfrI CTTAAG 2 cut(s) 2525, 3721
BfuAI ACCTGC 1 cut(s) 2779
BfuI GTATCC 1 cut(s) 2143
BglI GCCNNNNNGGC 1 cut(s) 1397
BglII AGATCT 4 cut(s) 847, 1096, 1804, 3133
BmeRI GACNNNNNGTC 1 cut(s) 1930
BmeT110I CYCGRG 3 cut(s) 152, 582, 1375
BmtI GCTAGC 1 cut(s) 1316
BoxI GACNNNNGTC 1 cut(s) 497
BpiI GAAGAC 4 cut(s) 1971, 1992, 3516, 3729
BpmI CTGGAG 4 cut(s) 50, 1859, 2306, 3287
Bpu10I CCTNAGC 1 cut(s) 474
Bpu14I TTCGAA 2 cut(s) 1884, 3586
BpuEI CTTGAG 3 cut(s) 2549, 2849, 2993
BpuMI CCSGG 7 cut(s) 88, 280, 387, 413, 427, 2147, 3697
BsaBI GATNNNNATC 4 cut(s) 846, 1095, 1803, 2184
BsaHI GRCGYC 3 cut(s) 84, 218, 446
BsaI GGTCTC 2 cut(s) 484, 3186
BsaJI CCNNGG 7 cut(s) 59, 87, 1252, 1290, 1617, 2989, 3695
BsaWI WCCGGW 2 cut(s) 240, 951
BsaXI ACNNNNNCTCC 2 cut(s) 132, 162
Bsc4I CCNNNNNNNGG 9 cut(s) 114, 153, 418, 442, 459, 475, 562, 3538, 3726
Bse1I ACTGG 7 cut(s) 328, 708, 1053, 1842, 2906, 3098, 3249
Bse8I GATNNNNATC 4 cut(s) 846, 1095, 1803, 2184
BseBI CCWGG 3 cut(s) 68, 1499, 3299
BseDI CCNNGG 7 cut(s) 59, 87, 1252, 1290, 1617, 2989, 3695
BseGI GGATG 9 cut(s) 571, 844, 868, 2126, 2142, 2620, 2967, 3298, 3320
BseJI GATNNNNATC 4 cut(s) 846, 1095, 1803, 2184
BseLI CCNNNNNNNGG 9 cut(s) 114, 153, 418, 442, 459, 475, 562, 3538, 3726
BseMII CTCAG 5 cut(s) 488, 740, 1443, 1807, 3338
BseNI ACTGG 7 cut(s) 328, 708, 1053, 1842, 2906, 3098, 3249
BseRI GAGGAG 1 cut(s) 1609
BseSI GKGCMC 3 cut(s) 466, 1792, 3533
BseYI CCCAGC 2 cut(s) 1408, 1544
BsgI GTGCAG 3 cut(s) 1040, 1147, 2236
Bsh1236I CGCG 3 cut(s) 61, 2235, 3411
Bsh1285I CGRYCG 1 cut(s) 802
BshNI GGYRCC 3 cut(s) 83, 948, 3528
BsiEI CGRYCG 1 cut(s) 802
BsiHKAI GWGCWC 2 cut(s) 563, 1560
BsiHKCI CYCGRG 3 cut(s) 152, 582, 1375
BsiWI CGTACG 1 cut(s) 126
BslFI GGGAC 5 cut(s) 272, 295, 491, 3627, 3678
BslI CCNNNNNNNGG 9 cut(s) 114, 153, 418, 442, 459, 475, 562, 3538, 3726
BsmAI GTCTC 7 cut(s) 484, 1424, 2456, 2545, 3186, 3247, 3265
BsmFI GGGAC 5 cut(s) 272, 295, 491, 3627, 3678
BsmI GAATGC 3 cut(s) 1635, 1880, 2350
Bso31I GGTCTC 2 cut(s) 484, 3186
BsoBI CYCGRG 3 cut(s) 152, 582, 1375
Bsp119I TTCGAA 2 cut(s) 1884, 3586
Bsp120I GGGCCC 1 cut(s) 462
Bsp1286I GDGCHC 6 cut(s) 466, 539, 563, 1560, 1792, 3533
Bsp1407I TGTACA 1 cut(s) 3840
Bsp19I CCATGG 3 cut(s) 1290, 1617, 2989
BspCNI CTCAG 5 cut(s) 487, 739, 1444, 1806, 3339
BspFNI CGCG 3 cut(s) 61, 2235, 3411
BspMAI CTGCAG 1 cut(s) 1747
BspMI ACCTGC 1 cut(s) 2779
BspOI GCTAGC 1 cut(s) 1316
BspPI GGATC 6 cut(s) 836, 1480, 2356, 2415, 2853, 3133
BspQI GCTCTTC 4 cut(s) 721, 964, 1438, 3377
BspT104I TTCGAA 2 cut(s) 1884, 3586
BspT107I GGYRCC 3 cut(s) 83, 948, 3528
BspTI CTTAAG 2 cut(s) 2525, 3721
BspTNI GGTCTC 2 cut(s) 484, 3186
BsrBI CCGCTC 2 cut(s) 460, 878
BsrGI TGTACA 1 cut(s) 3840
BsrI ACTGG 7 cut(s) 328, 708, 1053, 1842, 2906, 3098, 3249
BssECI CCNNGG 7 cut(s) 59, 87, 1252, 1290, 1617, 2989, 3695
BssNI GRCGYC 3 cut(s) 84, 218, 446
BssSI CACGAG 1 cut(s) 1591
BssT1I CCWWGG 4 cut(s) 1252, 1290, 1617, 2989
Bst2BI CACGAG 1 cut(s) 1591
Bst2UI CCWGG 3 cut(s) 68, 1499, 3299
Bst6I CTCTTC 8 cut(s) 721, 964, 1438, 2295, 3111, 3191, 3377, 3721
BstACI GRCGYC 3 cut(s) 84, 218, 446
BstAFI CTTAAG 2 cut(s) 2525, 3721
BstAUI TGTACA 1 cut(s) 3840
BstBI TTCGAA 2 cut(s) 1884, 3586
BstC8I GCNNGC 9 cut(s) 458, 462, 466, 1314, 1318, 1633, 2096, 2288, 2492
BstDSI CCRYGG 4 cut(s) 59, 1290, 1617, 2989
BstEII GGTNACC 1 cut(s) 421
BstENI CCTNNNNNAGG 1 cut(s) 3724
BstF5I GGATG 9 cut(s) 571, 844, 868, 2126, 2142, 2620, 2967, 3298, 3320
BstFNI CGCG 3 cut(s) 61, 2235, 3411
BstH2I RGCGCY 3 cut(s) 74, 87, 1229
BstHHI GCGC 4 cut(s) 73, 86, 1228, 1312
BstMAI GTCTC 7 cut(s) 484, 1424, 2456, 2545, 3186, 3247, 3265
BstMCI CGRYCG 1 cut(s) 802
BstMWI GCNNNNNNNGC 8 cut(s) 58, 61, 70, 470, 1190, 1397, 1632, 1775
BstNI CCWGG 3 cut(s) 68, 1499, 3299
BstNSI RCATGY 3 cut(s) 136, 1510, 1607
BstPAI GACNNNNGTC 1 cut(s) 497
BstPI GGTNACC 1 cut(s) 421
BstSFI CTRYAG 4 cut(s) 27, 488, 627, 1743
BstSLI GKGCMC 3 cut(s) 466, 1792, 3533
BstUI CGCG 3 cut(s) 61, 2235, 3411
BstV2I GAAGAC 4 cut(s) 1971, 1992, 3516, 3729
BstX2I RGATCY 8 cut(s) 847, 1096, 1485, 1804, 2361, 2407, 2858, 3133
BstYI RGATCY 8 cut(s) 847, 1096, 1485, 1804, 2361, 2407, 2858, 3133
BsuI GTATCC 1 cut(s) 2143
BtgI CCRYGG 4 cut(s) 59, 1290, 1617, 2989
BtsCI GGATG 9 cut(s) 571, 844, 868, 2126, 2142, 2620, 2967, 3298, 3320
BtsI GCAGTG 3 cut(s) 1245, 2253, 3564
BtsIMutI CAGTG 9 cut(s) 321, 734, 1245, 2073, 2253, 2922, 3105, 3384, 3564
BveI ACCTGC 1 cut(s) 2779
Cac8I GCNNGC 9 cut(s) 458, 462, 466, 1314, 1318, 1633, 2096, 2288, 2492
CaiI CAGNNNCTG 3 cut(s) 52, 73, 2952
CfoI GCGC 4 cut(s) 73, 86, 1228, 1312
Cfr42I CCGCGG 1 cut(s) 62
CpoI CGGWCCG 1 cut(s) 433
CseI GACGC 2 cut(s) 435, 493
CspI CGGWCCG 1 cut(s) 433
DinI GGCGCC 1 cut(s) 85
DraI TTTAAA 2 cut(s) 2355, 3282
DrdI GACNNNNNNGTC 1 cut(s) 305
DriI GACNNNNNGTC 1 cut(s) 1930
DseDI GACNNNNNNGTC 1 cut(s) 305
EaeI YGGCCR 3 cut(s) 636, 1050, 2228
Eam1104I CTCTTC 8 cut(s) 721, 964, 1438, 2295, 3111, 3191, 3377, 3721
Eam1105I GACNNNNNGTC 1 cut(s) 1930
EarI CTCTTC 8 cut(s) 721, 964, 1438, 2295, 3111, 3191, 3377, 3721
EciI GGCGGA 1 cut(s) 1826
Ecl136II GAGCTC 2 cut(s) 561, 1558
Eco130I CCWWGG 4 cut(s) 1252, 1290, 1617, 2989
Eco147I AGGCCT 1 cut(s) 395
Eco24I GRGCYC 4 cut(s) 466, 539, 563, 1560
Eco31I GGTCTC 2 cut(s) 484, 3186
Eco32I GATATC 1 cut(s) 1648
Eco53kI GAGCTC 2 cut(s) 561, 1558
Eco57I CTGAAG 2 cut(s) 627, 3215
Eco88I CYCGRG 3 cut(s) 152, 582, 1375
Eco91I GGTNACC 1 cut(s) 421
EcoICRI GAGCTC 2 cut(s) 561, 1558
EcoNI CCTNNNNNAGG 1 cut(s) 3724
EcoO109I RGGNCCY 2 cut(s) 259, 761
EcoO65I GGTNACC 1 cut(s) 421
EcoRI GAATTC 2 cut(s) 906, 1539
EcoRII CCWGG 3 cut(s) 66, 1497, 3297
EcoRV GATATC 1 cut(s) 1648
EcoT14I CCWWGG 4 cut(s) 1252, 1290, 1617, 2989
EcoT22I ATGCAT 2 cut(s) 1882, 2136
EcoT38I GRGCYC 4 cut(s) 466, 539, 563, 1560
EgeI GGCGCC 1 cut(s) 85
EheI GGCGCC 1 cut(s) 85
ErhI CCWWGG 4 cut(s) 1252, 1290, 1617, 2989
FalI AAGNNNNNCTT 4 cut(s) 1922, 1954, 3424, 3456
FaqI GGGAC 5 cut(s) 272, 295, 491, 3627, 3678
FauI CCCGC 5 cut(s) 371, 453, 473, 883, 1325
FauNDI CATATG 1 cut(s) 3478
FbaI TGATCA 1 cut(s) 3796
FblI GTMKAC 1 cut(s) 1759
FokI GGATG 9 cut(s) 578, 851, 875, 2129, 2133, 2627, 2974, 3305, 3327
FriOI GRGCYC 4 cut(s) 466, 539, 563, 1560
FspBI CTAG 7 cut(s) 440, 702, 1313, 2091, 2421, 2939, 3782
GlaI GCGC 4 cut(s) 72, 85, 1227, 1311
GsaI CCCAGC 2 cut(s) 1412, 1548
GsuI CTGGAG 4 cut(s) 50, 1859, 2306, 3287
HaeII RGCGCY 3 cut(s) 74, 87, 1229
HgaI GACGC 2 cut(s) 435, 493
HhaI GCGC 4 cut(s) 73, 86, 1228, 1312
Hin1I GRCGYC 3 cut(s) 84, 218, 446
Hin6I GCGC 4 cut(s) 71, 84, 1226, 1310
HinP1I GCGC 4 cut(s) 71, 84, 1226, 1310
HincII GTYRAC 3 cut(s) 44, 1105, 3649
HindII GTYRAC 3 cut(s) 44, 1105, 3649
HindIII AAGCTT 3 cut(s) 1900, 2469, 2531
HphI GGTGA 2 cut(s) 415, 1579
Hpy166II GTNNAC 8 cut(s) 44, 1105, 1158, 1760, 2193, 3052, 3562, 3649
Hpy8I GTNNAC 8 cut(s) 44, 1105, 1158, 1760, 2193, 3052, 3562, 3649
Hpy99I CGWCG 6 cut(s) 127, 167, 302, 305, 514, 544
HpyCH4IV ACGT 3 cut(s) 218, 1300, 1725
HpyF10VI GCNNNNNNNGC 8 cut(s) 58, 61, 70, 470, 1190, 1397, 1632, 1775
HpySE526I ACGT 3 cut(s) 218, 1300, 1725
Hsp92I GRCGYC 3 cut(s) 84, 218, 446
HspAI GCGC 4 cut(s) 71, 84, 1226, 1310
KasI GGCGCC 1 cut(s) 83
KpnI GGTACC 1 cut(s) 952
Ksp22I TGATCA 1 cut(s) 3796
KspI CCGCGG 1 cut(s) 62
LguI GCTCTTC 4 cut(s) 721, 964, 1438, 3377
LmnI GCTCC 4 cut(s) 69, 544, 637, 2876
MaeI CTAG 7 cut(s) 440, 702, 1313, 2091, 2421, 2939, 3782
MaeII ACGT 3 cut(s) 218, 1300, 1725
MaeIII GTNAC 8 cut(s) 319, 421, 659, 1243, 2917, 2966, 2997, 3168
MbiI CCGCTC 2 cut(s) 460, 878
MfeI CAATTG 3 cut(s) 1764, 2495, 3503
MflI RGATCY 8 cut(s) 847, 1096, 1485, 1804, 2361, 2407, 2858, 3133
MhlI GDGCHC 6 cut(s) 466, 539, 563, 1560, 1792, 3533
MlsI TGGCCA 1 cut(s) 1052
MluI ACGCGT 1 cut(s) 3409
MluNI TGGCCA 1 cut(s) 1052
Mly113I GGCGCC 1 cut(s) 84
MlyI GAGTC 3 cut(s) 1100, 1367, 3433
MmeI TCCRAC 3 cut(s) 432, 3142, 3783
Mox20I TGGCCA 1 cut(s) 1052
Mph1103I ATGCAT 2 cut(s) 1882, 2136
MroXI GAANNNNTTC 1 cut(s) 251
MscI TGGCCA 1 cut(s) 1052
MslI CAYNNNNRTG 4 cut(s) 1885, 2821, 2975, 3147
Msp20I TGGCCA 1 cut(s) 1052
MspA1I CMGCKG 4 cut(s) 61, 1024, 1451, 2627
MspCI CTTAAG 2 cut(s) 2525, 3721
MunI CAATTG 3 cut(s) 1764, 2495, 3503
Mva1269I GAATGC 3 cut(s) 1635, 1880, 2350
MvaI CCWGG 3 cut(s) 68, 1499, 3299
MvnI CGCG 3 cut(s) 61, 2235, 3411
MwoI GCNNNNNNNGC 8 cut(s) 58, 61, 70, 470, 1190, 1397, 1632, 1775
NarI GGCGCC 1 cut(s) 84
NciI CCSGG 7 cut(s) 88, 280, 387, 413, 427, 2147, 3697
NcoI CCATGG 3 cut(s) 1290, 1617, 2989
NdeI CATATG 1 cut(s) 3478
NheI GCTAGC 1 cut(s) 1312
NmuCI GTSAC 5 cut(s) 319, 421, 1243, 2917, 2966
NsiI ATGCAT 2 cut(s) 1882, 2136
NspI RCATGY 3 cut(s) 136, 1510, 1607
NspV TTCGAA 2 cut(s) 1884, 3586
PaeR7I CTCGAG 1 cut(s) 1375
PceI AGGCCT 1 cut(s) 395
PciI ACATGT 2 cut(s) 132, 1506
PciSI GCTCTTC 4 cut(s) 721, 964, 1438, 3377
PcsI WCGNNNNNNNCGW 3 cut(s) 159, 306, 997
PctI GAATGC 3 cut(s) 1635, 1880, 2350
PdmI GAANNNNTTC 1 cut(s) 251
Pfl23II CGTACG 1 cut(s) 126
PflFI GACNNNGTC 3 cut(s) 305, 1241, 2556
PflMI CCANNNNNTGG 1 cut(s) 114
PfoI TCCNGGA 3 cut(s) 278, 1497, 2145
Ple19I CGATCG 1 cut(s) 802
PleI GAGTC 3 cut(s) 1100, 1367, 3432
PluTI GGCGCC 1 cut(s) 87
PpsI GAGTC 3 cut(s) 1100, 1367, 3432
PpuMI RGGWCCY 2 cut(s) 259, 761
PscI ACATGT 2 cut(s) 132, 1506
PshAI GACNNNNGTC 1 cut(s) 497
PsiI TTATAA 1 cut(s) 1493
Psp124BI GAGCTC 2 cut(s) 563, 1560
Psp5II RGGWCCY 2 cut(s) 259, 761
Psp6I CCWGG 3 cut(s) 66, 1497, 3297
PspEI GGTNACC 1 cut(s) 421
PspFI CCCAGC 2 cut(s) 1408, 1544
PspGI CCWGG 3 cut(s) 66, 1497, 3297
PspLI CGTACG 1 cut(s) 126
PspOMI GGGCCC 1 cut(s) 462
PspPPI RGGWCCY 2 cut(s) 259, 761
PsrI GAACNNNNNNTAC 2 cut(s) 2673, 2705
PstI CTGCAG 1 cut(s) 1747
PstNI CAGNNNCTG 3 cut(s) 52, 73, 2952
PsuI RGATCY 8 cut(s) 847, 1096, 1485, 1804, 2361, 2407, 2858, 3133
PsyI GACNNNGTC 3 cut(s) 305, 1241, 2556
PvuI CGATCG 1 cut(s) 802
RseI CAYNNNNRTG 4 cut(s) 1885, 2821, 2975, 3147
Rsr2I CGGWCCG 1 cut(s) 433
RsrII CGGWCCG 1 cut(s) 433
SacI GAGCTC 2 cut(s) 563, 1560
SacII CCGCGG 1 cut(s) 62
SapI GCTCTTC 4 cut(s) 721, 964, 1438, 3377
SchI GAGTC 3 cut(s) 1100, 1367, 3433
SduI GDGCHC 6 cut(s) 466, 539, 563, 1560, 1792, 3533
SfcI CTRYAG 4 cut(s) 27, 488, 627, 1743
SfoI GGCGCC 1 cut(s) 85
Sfr274I CTCGAG 1 cut(s) 1375
Sfr303I CCGCGG 1 cut(s) 62
SfuI TTCGAA 2 cut(s) 1884, 3586
SgrBI CCGCGG 1 cut(s) 62
SlaI CTCGAG 1 cut(s) 1375
SmiI ATTTAAAT 2 cut(s) 2355, 3282
SmiMI CAYNNNNRTG 4 cut(s) 1885, 2821, 2975, 3147
SmlI CTYRAG 6 cut(s) 1375, 2525, 2564, 2828, 3008, 3721
SmoI CTYRAG 6 cut(s) 1375, 2525, 2564, 2828, 3008, 3721
SpeI ACTAGT 1 cut(s) 2420
SseBI AGGCCT 1 cut(s) 395
SspDI GGCGCC 1 cut(s) 83
SspI AATATT 3 cut(s) 1384, 2164, 3223
SspMI CTAG 7 cut(s) 440, 702, 1313, 2091, 2421, 2939, 3782
SstI GAGCTC 2 cut(s) 563, 1560
StuI AGGCCT 1 cut(s) 395
StyI CCWWGG 4 cut(s) 1252, 1290, 1617, 2989
SwaI ATTTAAAT 2 cut(s) 2355, 3282
TaiI ACGT 3 cut(s) 221, 1303, 1728
TaqII GACCGA 2 cut(s) 299, 664
TatI WGTACW 5 cut(s) 1135, 1342, 2943, 3051, 3840
TauI GCSGC 6 cut(s) 61, 64, 378, 446, 1451, 2230
TscAI CASTG 9 cut(s) 328, 734, 1252, 2073, 2260, 2922, 3105, 3384, 3564
TseFI GTSAC 5 cut(s) 319, 421, 1243, 2917, 2966
Tsp45I GTSAC 5 cut(s) 319, 421, 1243, 2917, 2966
TspGWI ACGGA 4 cut(s) 136, 557, 2419, 2500
TspRI CASTG 9 cut(s) 328, 734, 1252, 2073, 2260, 2922, 3105, 3384, 3564
Tth111I GACNNNGTC 3 cut(s) 305, 1241, 2556
Van91I CCANNNNNTGG 1 cut(s) 114
Vha464I CTTAAG 2 cut(s) 2525, 3721
XagI CCTNNNNNAGG 1 cut(s) 3724
XceI RCATGY 3 cut(s) 136, 1510, 1607
XhoI CTCGAG 1 cut(s) 1375
XmiI GTMKAC 1 cut(s) 1759
XmnI GAANNNNTTC 1 cut(s) 251
XspI CTAG 7 cut(s) 440, 702, 1313, 2091, 2421, 2939, 3782
ZraI GACGTC 1 cut(s) 219
Zsp2I ATGCAT 2 cut(s) 1882, 2136
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.