Rroxscaffold_1G00001540

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000379
Physical Location & Seq
Reverse (-)
1859639 .. 1865105
5467 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00001540.1

Sequence Viewer

Length: 1986 bp
ATGGCCTCGTCTTCATCTGTTCCTTCATCATCGTCAGCTCGTCGCTGGAAGCATGATGTGTTTTTGAGTTTCAGGGGTCCTGACACTCGCAAGGGCATAACATCTCAACTATGGGATCGACTGCAGAGGAGCGGAATTAAAACATTCATGGATGATCTAGATCTTGAATTTGGGGATGCTATTTCTCCCACTATCCTAAAGGCAATTGAAGAATCAAGGTTTGCAATTGTTGTTCTCTCGCGAGACTACGCTTCTTCTGCTTGGTGTTTGGAGGAACTTGCAAAGATCTGTGAGTGCATGAAAGATCAGAACAGAATTCTTCCGCTTTTTTTTGACGTGGAGCCCTCTGATGTAAGATATCAGAAGAGAAGTTTTGATGAAGCTTTCTATAAGCATGAAACCTCCCAGCGACACCCATGGGAAAAAGTCCAGCAGTGGAGAGTTGCTTTAAACAAAGTGGCCGCTGTCCGTGGCTGGAATACGCAGGATTATAAGACTCACAAAAAACTTGTTTACGACCTTGTGGAAACTGTCCGCAGTAGAGTATCACCTGATGCAATTGAGCCCACAGGAGATTTTGAAGAATATGAAGCAACAACAGAAGCCATGGATAAGGTTAAGAAGGCGCTAATAGATGACGAGATCACTGCCATTGGTGTCTACGGCATGGGCGGCGTTGGAAAGACAACCATGGTCAAACATGTAGCTGCACAAGCCTGCAACAATGGTACTTTTAACCATTGGATTATCGCTGCCATATCCCAAAGCCCCGACTTGAGAAAAGTTCAAGGCACATTGCTAGAATTGTTGGACGTTAAAGTTGAGGAGGAGACAGAAGGTGGAAGAGCTAAGAGGTTGCATAAGGAGATCATGAAAAGAGAAAAACTCCTGATAATCTTGGACGATGTTTGGGACAGAACAGAGTTATCAAGCATAGGGATTCCCACCCACAAGCAGCTTCAAACGTGCAATTCCAAAGTCGTACTCACCACACGGAGATTGCATGTTTGTAGTTCCATGGACAGCCAAGCAAGCATTCCTCTCAATATCTTATCAGAACAAGATTCTTGGAAATTGTTTGAGAGAAGTGCAAGAAGGTCTCTTGAATCAACCACTTTTGAGGGTGTAGCGAGGAGGGTAGCTGGAGAATGCAGGGGTCTACCCATTGCATTGATAGCAGTTGCAAGGGCACTCAGAGATAAAGATGAGGCGGAATGGCAAAAAGCAGCTCGAAGACTAGAGAAGTCGCAATCTGCAACCGTTGAGGATGGGCAAGAGGCCTTCGAATGTATAAAATTGAGCTATGATTACTTGCAAGATGAGGATTCCAGGTCATGCTTCTTGCTCTGTTGCCTATATCCAGAAGACTATGACATCCCAACACGAAGGTTGTTCGATTATGGATTCGGGAAAGGATTGTTTAGAGGAGATGCCGACACAATCCAAGAAGCCAGAGGAACAGCAGATTCGGTGGTCAAGTACCTGAAAGATTCTAGCTTGCTTTTGGATGGTGAGAAAAATGGATGTGTAAAGATGCATGATGTCATACGGGATACAGCCCTGAATATTGCAAAATCTAAAGATGGGCACGGGTTTCTGGTAAGAGCTGGCTGTGGTTTAAAGCATTGGCCATGTGGATCACATCAAGACTACTCTGCAATCTCACTAATGAGGAACGAAATTAGCAAGCTGCCTGAAGAAGAGTTGGTATGTCCAAATCTCCAGCTTTTATTACTAAACCAGAATGCTGATTTAAATGAGATCCCAGAAAAGTTTATCCAAAATCTGAATAAATTAAGGCTCTTGGATCTTAGCAACACTAGTATTTCCTCTCTACCCCAATCTTTCAGTTTCCTTACCAACCTCCAAGCTTTGTATTTAGATTCGTGCGAGAAATTGATTGACATGTCTATAGTGGGAAAACTGAAGAAGCTTGAAATTCTTAGTAAGTGGCAATTTTATGGGGGGAATTGCCTAGAGAAATAG

Protein Analysis

661

Amino Acids

74.9

Weight (kDa)

6.1

Isoelectric Point (pI)

57.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 17 - 181 1.8e-45 TIR domain
TIR_2 PF13676 20 - 116 1e-16 TIR domain
NB-ARC PF00931 201 - 364 5.2e-31 NB-ARC domain
LRR_8 PF13855 572 - 630 1.2e-08 Leucine rich repeat
LRR_14 PF23598 577 - 652 1.7e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000379)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17740 FvH4_1g17740 FvH4_1g17740 FvH4_1g17740 FvH4_3g42940 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43860 FvH4_3g43871 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43880 FvH4_3g43940 FvH4_3g43991 FvH4_3g44561 FvH4_3g44570 FvH4_3g44610 FvH4_3g44670 FvH4_3g44670 FvH4_3g44680 FvH4_3g44680 FvH4_3g44680 FvH4_3g45170 FvH4_3g45170 FvH4_3g45170 FvH4_3g45170 FvH4_3g45630 FvH4_3g45643 FvH4_3g45680 FvH4_3g45690 FvH4_3g45700 FvH4_3g45700 FvH4_3g45700 FvH4_3g45700 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45711 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730 FvH4_3g45730
malus_domestica MD11G1020200.v1.1 MD15G1398500.v1.1
rosa_chinensis RchiOBHm_Chr1g0326201 RchiOBHm_Chr5g0064091 RchiOBHm_Chr5g0076771 RchiOBHm_Chr5g0078181 RchiOBHm_Chr5g0078321 RchiOBHm_Chr5g0079331 RchiOBHm_Chr5g0079341 RchiOBHm_Chr5g0079351 RchiOBHm_Chr5g0079361 RchiOBHm_Chr5g0079441 RchiOBHm_Chr5g0079821 RchiOBHm_Chr5g0080071 RchiOBHm_Chr7g0212731 RchiOBHm_Chr7g0224201
rosa_laevigata RLG00000002871
rosa_multiflora Rmu_co8378879.1_g000001 Rmu_co8466133.1_g000001 Rmu_sc0000595.1_g000019 Rmu_sc0000616.1_g000025 Rmu_sc0000631.1_g000033 Rmu_sc0000945.1_g000004 Rmu_sc0001148.1_g000022 Rmu_sc0001226.1_g000016 Rmu_sc0002187.1_g000037 Rmu_sc0006084.1_g000005 Rmu_sc0006084.1_g000009 Rmu_sc0006084.1_g000019 Rmu_sc0006084.1_g000021
rosa_roxburghii Rroxscaffold_1G00001540 Rroxscaffold_1G00003210 Rroxscaffold_1G00003250 Rroxscaffold_1G00003340 Rroxscaffold_1G00003580 Rroxscaffold_1G00003940 Rroxscaffold_3G00228660 Rroxscaffold_3G00247850
rosa_rugosa Rorug05G0465800 Rorug05G0466100 Rorug07G0125700 Rorug07G0136300
rosa_wichuraiana Rw0G005160 Rw0G022760 Rw5G047710 Rw5G048070 Rw5G048080 Rw5G048150 Rw5G048180 Rw5G048210 Rw5G048250 Rw5G048290 Rw7G023250 Rw7G030960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 492
AccBSI CCGCTC 1 cut(s) 132
AccI GTMKAC 2 cut(s) 660, 1159
AccII CGCG 1 cut(s) 241
AciI CCGC 6 cut(s) 132, 323, 462, 535, 672, 1211
AclWI GGATC 4 cut(s) 123, 1645, 1756, 1815
AcoI YGGCCR 2 cut(s) 459, 1628
AcsI RAATTY 3 cut(s) 167, 315, 1938
AcuI CTGAAG 2 cut(s) 1716, 1946
AfaI GTAC 3 cut(s) 730, 984, 1481
AflIII ACRYGT 2 cut(s) 700, 1905
AgsI TTSAA 7 cut(s) 167, 209, 581, 788, 962, 1106, 1937
AhlI ACTAGT 1 cut(s) 1820
AjiI CACGTC 1 cut(s) 337
AjnI CCWGG 1 cut(s) 1328
AjuI GAANNNNNNNTTGG 2 cut(s) 1020, 1052
Alw26I GTCTC 3 cut(s) 237, 824, 1104
AlwI GGATC 4 cut(s) 123, 1645, 1756, 1815
AoxI GGCC 4 cut(s) 3, 459, 1278, 1628
ApeKI GCWGC 5 cut(s) 707, 752, 955, 1226, 1690
ApoI RAATTY 3 cut(s) 167, 315, 1938
AspLEI GCGC 1 cut(s) 628
AspS9I GGNCC 1 cut(s) 77
AsuHPI GGTGA 3 cut(s) 540, 979, 1523
AsuII TTCGAA 1 cut(s) 1284
AvaII GGWCC 1 cut(s) 77
BaeGI GKGCMC 2 cut(s) 1192, 1590
BalI TGGCCA 1 cut(s) 1630
BanII GRGCYC 2 cut(s) 345, 567
BbsI GAAGAC 3 cut(s) 3, 1240, 1371
BbvI GCAGC 5 cut(s) 694, 739, 967, 1238, 1677
BccI CCATC 3 cut(s) 1262, 1502, 1577
BceAI ACGGC 1 cut(s) 679
BcgI CGANNNNNNTGC 2 cut(s) 629, 663
BciT130I CCWGG 1 cut(s) 1330
BciVI GTATCC 1 cut(s) 1546
BcoDI GTCTC 3 cut(s) 237, 824, 1104
BcuI ACTAGT 1 cut(s) 1820
BfaI CTAG 6 cut(s) 158, 800, 1238, 1494, 1821, 1976
BfmI CTRYAG 2 cut(s) 122, 1911
BfoI RGCGCY 1 cut(s) 629
BfuI GTATCC 1 cut(s) 1546
BglII AGATCT 2 cut(s) 160, 285
BisI GCNGC 7 cut(s) 462, 673, 708, 753, 956, 1227, 1691
BlsI GCNGC 7 cut(s) 463, 674, 709, 754, 957, 1228, 1692
Bme1390I CCNGG 1 cut(s) 1330
Bme18I GGWCC 1 cut(s) 77
BmgBI CACGTC 1 cut(s) 337
BmgT120I GGNCC 1 cut(s) 77
BmiI GGNNCC 2 cut(s) 78, 342
BmrFI CCNGG 1 cut(s) 1330
BmsI GCATC 4 cut(s) 166, 544, 1420, 1524
BpiI GAAGAC 3 cut(s) 3, 1240, 1371
BplI GAGNNNNNCTC 2 cut(s) 870, 902
BpmI CTGGAG 2 cut(s) 1164, 1706
Bpu14I TTCGAA 1 cut(s) 1284
BpuEI CTTGAG 1 cut(s) 796
BsaBI GATNNNNATC 1 cut(s) 159
BsaI GGTCTC 1 cut(s) 1104
BsaJI CCNNGG 5 cut(s) 416, 469, 606, 690, 1017
Bse3DI GCAATG 2 cut(s) 794, 1164
Bse8I GATNNNNATC 1 cut(s) 159
BseBI CCWGG 1 cut(s) 1330
BseDI CCNNGG 5 cut(s) 416, 469, 606, 690, 1017
BseGI GGATG 6 cut(s) 157, 181, 1273, 1374, 1513, 1529
BseJI GATNNNNATC 1 cut(s) 159
BseMI GCAATG 2 cut(s) 794, 1164
BseMII CTCAG 1 cut(s) 1207
BseRI GAGGAG 5 cut(s) 142, 839, 842, 1147, 1440
BseSI GKGCMC 2 cut(s) 1192, 1590
BseXI GCAGC 5 cut(s) 694, 739, 967, 1238, 1677
BseYI CCCAGC 1 cut(s) 405
BsgI GTGCAG 1 cut(s) 693
Bsh1236I CGCG 1 cut(s) 241
BshFI GGCC 4 cut(s) 5, 461, 1280, 1630
BslFI GGGAC 1 cut(s) 926
BsmAI GTCTC 3 cut(s) 237, 824, 1104
BsmFI GGGAC 1 cut(s) 926
BsmI GAATGC 3 cut(s) 1035, 1154, 1750
BsnI GGCC 4 cut(s) 5, 461, 1280, 1630
Bso31I GGTCTC 1 cut(s) 1104
Bsp119I TTCGAA 1 cut(s) 1284
Bsp1286I GDGCHC 4 cut(s) 345, 567, 1192, 1590
Bsp19I CCATGG 4 cut(s) 416, 606, 690, 1017
Bsp68I TCGCGA 1 cut(s) 241
BspACI CCGC 6 cut(s) 132, 323, 462, 535, 672, 1211
BspANI GGCC 4 cut(s) 5, 461, 1280, 1630
BspCNI CTCAG 1 cut(s) 1206
BspFNI CGCG 1 cut(s) 241
BspHI TCATGA 1 cut(s) 870
BspLI GGNNCC 2 cut(s) 78, 342
BspMAI CTGCAG 1 cut(s) 126
BspPI GGATC 4 cut(s) 123, 1645, 1756, 1815
BspQI GCTCTTC 1 cut(s) 838
BspT104I TTCGAA 1 cut(s) 1284
BspTNI GGTCTC 1 cut(s) 1104
BsrBI CCGCTC 1 cut(s) 132
BsrDI GCAATG 2 cut(s) 794, 1164
BssECI CCNNGG 5 cut(s) 416, 469, 606, 690, 1017
BssT1I CCWWGG 4 cut(s) 416, 606, 690, 1017
Bst2UI CCWGG 1 cut(s) 1330
Bst4CI ACNGT 2 cut(s) 532, 1261
Bst6I CTCTTC 3 cut(s) 359, 838, 1695
BstBI TTCGAA 1 cut(s) 1284
BstC8I GCNNGC 5 cut(s) 718, 1033, 1499, 1609, 1688
BstDEI CTNAG 4 cut(s) 849, 1193, 1811, 1943
BstDSI CCRYGG 5 cut(s) 416, 469, 606, 690, 1017
BstF5I GGATG 6 cut(s) 157, 181, 1273, 1374, 1513, 1529
BstFNI CGCG 1 cut(s) 241
BstH2I RGCGCY 1 cut(s) 629
BstHHI GCGC 1 cut(s) 628
BstMAI GTCTC 3 cut(s) 237, 824, 1104
BstMWI GCNNNNNNNGC 5 cut(s) 257, 672, 713, 1032, 1175
BstNI CCWGG 1 cut(s) 1330
BstNSI RCATGY 3 cut(s) 704, 1007, 1909
BstSCI CCNGG 1 cut(s) 1328
BstSFI CTRYAG 2 cut(s) 122, 1911
BstSLI GKGCMC 2 cut(s) 1192, 1590
BstUI CGCG 1 cut(s) 241
BstV1I GCAGC 5 cut(s) 694, 739, 967, 1238, 1677
BstV2I GAAGAC 3 cut(s) 3, 1240, 1371
BstX2I RGATCY 4 cut(s) 160, 285, 1761, 1807
BstYI RGATCY 4 cut(s) 160, 285, 1761, 1807
BsuI GTATCC 1 cut(s) 1546
BsuRI GGCC 4 cut(s) 5, 461, 1280, 1630
BtgI CCRYGG 5 cut(s) 416, 469, 606, 690, 1017
BtrI CACGTC 1 cut(s) 337
BtsCI GGATG 6 cut(s) 157, 181, 1273, 1374, 1513, 1529
BtsI GCAGTG 2 cut(s) 440, 645
BtsIMutI CAGTG 2 cut(s) 440, 645
BtuMI TCGCGA 1 cut(s) 241
Cac8I GCNNGC 5 cut(s) 718, 1033, 1499, 1609, 1688
CciI TCATGA 1 cut(s) 870
CfoI GCGC 1 cut(s) 628
Cfr13I GGNCC 1 cut(s) 77
Csp6I GTAC 3 cut(s) 729, 983, 1480
CviQI GTAC 3 cut(s) 729, 983, 1480
DdeI CTNAG 4 cut(s) 849, 1193, 1811, 1943
DraI TTTAAA 3 cut(s) 450, 1620, 1755
EaeI YGGCCR 2 cut(s) 459, 1628
Eam1104I CTCTTC 3 cut(s) 359, 838, 1695
EarI CTCTTC 3 cut(s) 359, 838, 1695
EciI GGCGGA 1 cut(s) 1226
Eco130I CCWWGG 4 cut(s) 416, 606, 690, 1017
Eco147I AGGCCT 1 cut(s) 1280
Eco24I GRGCYC 2 cut(s) 345, 567
Eco31I GGTCTC 1 cut(s) 1104
Eco32I GATATC 1 cut(s) 359
Eco47I GGWCC 1 cut(s) 77
Eco57I CTGAAG 2 cut(s) 1716, 1946
EcoO109I RGGNCCY 1 cut(s) 77
EcoRI GAATTC 1 cut(s) 315
EcoRII CCWGG 1 cut(s) 1328
EcoRV GATATC 1 cut(s) 359
EcoT14I CCWWGG 4 cut(s) 416, 606, 690, 1017
EcoT22I ATGCAT 1 cut(s) 1539
EcoT38I GRGCYC 2 cut(s) 345, 567
ErhI CCWWGG 4 cut(s) 416, 606, 690, 1017
FaqI GGGAC 1 cut(s) 926
FblI GTMKAC 2 cut(s) 660, 1159
Fnu4HI GCNGC 7 cut(s) 462, 673, 708, 753, 956, 1227, 1691
FokI GGATG 6 cut(s) 164, 188, 1280, 1361, 1520, 1536
FriOI GRGCYC 2 cut(s) 345, 567
Fsp4HI GCNGC 7 cut(s) 462, 673, 708, 753, 956, 1227, 1691
FspBI CTAG 6 cut(s) 158, 800, 1238, 1494, 1821, 1976
GlaI GCGC 1 cut(s) 627
GluI GCNGC 7 cut(s) 462, 673, 708, 753, 956, 1227, 1691
GsaI CCCAGC 1 cut(s) 409
GsuI CTGGAG 2 cut(s) 1164, 1706
HaeII RGCGCY 1 cut(s) 629
HaeIII GGCC 4 cut(s) 5, 461, 1280, 1630
HhaI GCGC 1 cut(s) 628
Hin6I GCGC 1 cut(s) 626
HinP1I GCGC 1 cut(s) 626
HindIII AAGCTT 3 cut(s) 381, 1869, 1931
HphI GGTGA 3 cut(s) 540, 979, 1523
Hpy166II GTNNAC 3 cut(s) 514, 661, 1160
Hpy188I TCNGA 6 cut(s) 309, 349, 363, 1057, 1196, 1788
Hpy8I GTNNAC 3 cut(s) 514, 661, 1160
Hpy99I CGWCG 1 cut(s) 45
HpyAV CCTTC 6 cut(s) 33, 616, 830, 1089, 1291, 1380
HpyCH4III ACNGT 2 cut(s) 532, 1261
HpyCH4IV ACGT 3 cut(s) 336, 813, 965
HpyF10VI GCNNNNNNNGC 5 cut(s) 257, 672, 713, 1032, 1175
HpyF3I CTNAG 4 cut(s) 849, 1193, 1811, 1943
HpySE526I ACGT 3 cut(s) 336, 813, 965
HspAI GCGC 1 cut(s) 626
LguI GCTCTTC 1 cut(s) 838
LmnI GCTCC 2 cut(s) 129, 340
Lsp1109I GCAGC 5 cut(s) 694, 739, 967, 1238, 1677
LweI GCATC 4 cut(s) 166, 544, 1420, 1524
MaeI CTAG 6 cut(s) 158, 800, 1238, 1494, 1821, 1976
MaeII ACGT 3 cut(s) 336, 813, 965
MbiI CCGCTC 1 cut(s) 132
MfeI CAATTG 3 cut(s) 204, 225, 558
MflI RGATCY 4 cut(s) 160, 285, 1761, 1807
MhlI GDGCHC 4 cut(s) 345, 567, 1192, 1590
MlsI TGGCCA 1 cut(s) 1630
MluNI TGGCCA 1 cut(s) 1630
MlyI GAGTC 1 cut(s) 490
MmeI TCCRAC 2 cut(s) 658, 789
Mox20I TGGCCA 1 cut(s) 1630
Mph1103I ATGCAT 1 cut(s) 1539
MscI TGGCCA 1 cut(s) 1630
MseI TTAA 8 cut(s) 138, 449, 618, 735, 816, 1619, 1754, 1796
Msp20I TGGCCA 1 cut(s) 1630
MspA1I CMGCKG 1 cut(s) 464
MspR9I CCNGG 1 cut(s) 1330
MunI CAATTG 3 cut(s) 204, 225, 558
Mva1269I GAATGC 3 cut(s) 1035, 1154, 1750
MvaI CCWGG 1 cut(s) 1330
MvnI CGCG 1 cut(s) 241
MwoI GCNNNNNNNGC 5 cut(s) 257, 672, 713, 1032, 1175
NcoI CCATGG 4 cut(s) 416, 606, 690, 1017
NlaIV GGNNCC 2 cut(s) 78, 342
NruI TCGCGA 1 cut(s) 241
NsiI ATGCAT 1 cut(s) 1539
NspI RCATGY 3 cut(s) 704, 1007, 1909
NspV TTCGAA 1 cut(s) 1284
PagI TCATGA 1 cut(s) 870
PceI AGGCCT 1 cut(s) 1280
PciI ACATGT 2 cut(s) 700, 1905
PciSI GCTCTTC 1 cut(s) 838
PctI GAATGC 3 cut(s) 1035, 1154, 1750
PfeI GAWTC 9 cut(s) 212, 940, 1064, 1106, 1325, 1404, 1466, 1490, 1883
PkrI GCNGC 7 cut(s) 463, 674, 709, 754, 957, 1228, 1692
PleI GAGTC 1 cut(s) 490
PpsI GAGTC 1 cut(s) 490
PpuMI RGGWCCY 1 cut(s) 77
PscI ACATGT 2 cut(s) 700, 1905
PsiI TTATAA 1 cut(s) 492
Psp5II RGGWCCY 1 cut(s) 77
Psp6I CCWGG 1 cut(s) 1328
PspFI CCCAGC 1 cut(s) 405
PspGI CCWGG 1 cut(s) 1328
PspN4I GGNNCC 2 cut(s) 78, 342
PspPI GGNCC 1 cut(s) 77
PspPPI RGGWCCY 1 cut(s) 77
PstI CTGCAG 1 cut(s) 126
PsuI RGATCY 4 cut(s) 160, 285, 1761, 1807
RruI TCGCGA 1 cut(s) 241
RsaI GTAC 3 cut(s) 730, 984, 1481
RsaNI GTAC 3 cut(s) 729, 983, 1480
SapI GCTCTTC 1 cut(s) 838
SaqAI TTAA 8 cut(s) 138, 449, 618, 735, 816, 1619, 1754, 1796
SatI GCNGC 7 cut(s) 462, 673, 708, 753, 956, 1227, 1691
Sau96I GGNCC 1 cut(s) 77
SchI GAGTC 1 cut(s) 490
ScrFI CCNGG 1 cut(s) 1330
SduI GDGCHC 4 cut(s) 345, 567, 1192, 1590
SfaNI GCATC 4 cut(s) 166, 544, 1420, 1524
SfcI CTRYAG 2 cut(s) 122, 1911
SfuI TTCGAA 1 cut(s) 1284
SinI GGWCC 1 cut(s) 77
SmiI ATTTAAAT 1 cut(s) 1755
SmlI CTYRAG 1 cut(s) 775
SmoI CTYRAG 1 cut(s) 775
SpeI ACTAGT 1 cut(s) 1820
SseBI AGGCCT 1 cut(s) 1280
SsiI CCGC 6 cut(s) 132, 323, 462, 535, 672, 1211
SspI AATATT 1 cut(s) 1567
SspMI CTAG 6 cut(s) 158, 800, 1238, 1494, 1821, 1976
StuI AGGCCT 1 cut(s) 1280
StyD4I CCNGG 1 cut(s) 1328
StyI CCWWGG 4 cut(s) 416, 606, 690, 1017
SwaI ATTTAAAT 1 cut(s) 1755
TaaI ACNGT 2 cut(s) 532, 1261
TaiI ACGT 3 cut(s) 339, 816, 968
TaqI TCGA 4 cut(s) 118, 1231, 1284, 1395
TauI GCSGC 2 cut(s) 464, 675
TfiI GAWTC 9 cut(s) 212, 940, 1064, 1106, 1325, 1404, 1466, 1490, 1883
Tru1I TTAA 8 cut(s) 138, 449, 618, 735, 816, 1619, 1754, 1796
Tru9I TTAA 8 cut(s) 138, 449, 618, 735, 816, 1619, 1754, 1796
TscAI CASTG 2 cut(s) 440, 652
TseI GCWGC 5 cut(s) 707, 752, 955, 1226, 1690
TspDTI ATGAA 7 cut(s) 15, 136, 314, 393, 411, 603, 887
TspGWI ACGGA 2 cut(s) 458, 1009
TspRI CASTG 2 cut(s) 440, 652
VpaK11BI GGWCC 1 cut(s) 77
XapI RAATTY 3 cut(s) 167, 315, 1938
XbaI TCTAGA 1 cut(s) 157
XceI RCATGY 3 cut(s) 704, 1007, 1909
XmiI GTMKAC 2 cut(s) 660, 1159
XspI CTAG 6 cut(s) 158, 800, 1238, 1494, 1821, 1976
Zsp2I ATGCAT 1 cut(s) 1539
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.