Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0001232

Physical Location & Seq

Genomic Coordinates Forward (+)

15107377 .. 15119478

Gene Structure 12102 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00012260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1839 bp

ATGGAAAAGGCTGAGGACTTGAATTGCATATACAGAAACCCAAATGAGCCCATTGAAGCTCGAGTGAAGGACCTCCTTTCTCGCATGACTTTGAGAGAAAAAGTGGGCCAGATGACCCAAATAGAGCGTCGGGTTGCCACCCCTTCTGCCATTAAAGACTTCTACATAGGCAGTATACTGAGTGCTGGAGGCAGTGGGCCGTTTGAGAATGCTGAGTCGGCGGACTGGGCCGATATGGTGGACGGGTTTCAGAGGTCCGCTCTCGAAACCCGGCTCCAGATTCCGATGGTGTATGGGATTGATGCGGTTCATGGGAACAATAATGTGTATGGTGCCACCATTTTCCCTCACAATGTTGGTCTTGGGGCTACCAGAGACGCAGATTTGGCTGAGAGGATTGGTGTGGCAACTGCTATTGAAGTCAGGGCGAGCGGCATGCAGTACACTTTTGCTCCCTGTGTGGCTGTATGTAGAGATCCCAGATGGGGAAGATGCTATGAGAGTTACAGTGAAGACACTGAAATTGTTCGAAAGATGACATCTATTATTTCAGGCTTGCAGGGGAAGCCACCCCAAGGACATGAAGAGGGCTACCCTTTTGTAATGGGAAGAAACAACACTATTGCATGTGCCAAGCATTTTGTTGGAGATGGGGGTACACATGAAGGTCTAAATGAGGGGAATACCATATCATCTTATGATGACTTAGAGAGGATTCATATGGCCCCATATCTGGACTGTATTTCTCAAGGAGTTTCCACTGTCATGGCATCCTTTTCCAGCTGGAATGGAAGTAAACTACATGCCGATCGCTTTCTGCTGACAGAAGTTCTGAAAGATAAGCTAGGTTTTAAGGGTTTTGTGATCTCTGACTGGGCAGCTCTTGACAAAATTTGCGAACCTCCAGGGTCAAACAATAGATTCTGCATTTTATCTGGCATTAATGCTGGAATTGACATGGTTATGGTGCCTTTCAAATTTGAACAGTTTGTGGAGGATTTAGTATATCTAGTGGAACATGGGGAGATACCAATGTCCAGAATAGATGATGCTGTTGAAAGAATACTGAGAGTCAAGTTTGTTGCTGGTATTTTCGAGCATCCCTTTGCCGATAGATCTTTGCTTGACATAGTTGGTTGCAAGCCGCATAGAGATTTAGCACGCGAAGCTGTCCGCAAGTCCTTGGTACTGTTGAAGAATGGAAAGGACCCAAAAAAGCCTTTTCTTCCATTAGATAGAAAAGCTAAAAGAATTCTTGTTACTGGAACTCATGCTGATGATCTTGGATATCAGTGTGGAGGATGGACAGCCACTTGGGATGGAAAAAGTGGCAGGATAACAATTGGCACAACCATCTTGGAAGCTATCCAGAAGGCAGTTGGAGAAGAAACAGAAATAATTTATGAGCCATATCCATCAACAGACACCTTAGCACGTCAAGATATCTCTTTTGCAATTGTAGCTGTTGGTGAAGATCCATATGCAGAATTCACTGGTGACAGATCGGAGCTTGTGATCCCTTTTAGTGGACCTGATATCATAAGCTCAGTTGCGGACCGAATCCCCACATTGGTGATTCTGATATCGGGAAGACCCTTAACTTTAGAGCCAAGTCTCCTGGAAAAGATGGATGCTTTCATTGCTGCTTGGTTGCCTGGTAGTGAAGGAGAGGGGATTACAGATGTTATCTTTGGAGATTATGACTTCGAGGGCAAGCTACCGGTGACATGGTTTAGAAGTATTAAACAGCTGCCATTAAATGTTGGAAGCAATTCATATGACCCTTTGTTTCCTTTCGGCTTCGGTTTGAAATACAATAAGGACAATGCTACACACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0000323 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005886 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0015926 GO:0016020 GO:0016052 GO:0016787 GO:0016798 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0071944 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

612

Amino Acids

67.51

Weight (kDa)

5.13

Isoelectric Point (pI)

30.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	30 - 358	1.5e-72	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	395 - 605	2.9e-39	Glycosyl hydrolase family 3 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001232)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47000 AT3G47000 AT3G47000 AT3G47010 AT3G47010 AT3G47010 AT3G47040 AT3G47040 AT3G47040 AT3G47050
fragaria_vesca	FvH4_3g38160 FvH4_3g38160 FvH4_4g11940
malus_domestica	MD02G1242000.v1.1 MD02G1242100.v1.1 MD02G1242200.v1.1 MD02G1242300.v1.1 MD11G1080700.v1.1
prunus_persica	Prupe.2G092300_v2.0.a1 Prupe.2G092300_v2.0.a1 Prupe.2G092300_v2.0.a1 Prupe.2G092600_v2.0.a1 Prupe.2G092900_v2.0.a1 Prupe.2G092900_v2.0.a1 Prupe.6G061000_v2.0.a1 Prupe.6G061000_v2.0.a1 Prupe.6G061000_v2.0.a1 Prupe.6G061000_v2.0.a1 Prupe.6G061000_v2.0.a1
pyrus_communis	pycom02g20900 pycom11g06800 pycom11g06860
rosa_chinensis	RchiOBHm_Chr5g0068591 RchiOBHm_Chr6g0246121
rosa_laevigata	RLG00000035983 RLG00000036820 RLG00000036839
rosa_multiflora	Rmu_sc0004721.1_g000003
rosa_roxburghii	Rroxscaffold_1G00003560 Rroxscaffold_1G00012260 Rroxscaffold_3G00247860 Rroxscaffold_7G00214870
rosa_rugosa	Rorug05G0391700 Rorug05G0464600 Rorug05G0465200 Rorug05G0465800
rosa_samantha	Rh5AG449400 Rh5BG467600 Rh5DG481000 Rh5DG551200 Rh5DG552100 Rh7AG258000 Rh7CG274700 Rh7DG265200
rosa_wichuraiana	Rw5G041960 Rw5G048090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	332, 967
AccBSI	CCGCTC	2 cut(s)	260, 432
AccI	GTMKAC	1 cut(s)	175
AccII	CGCG	1 cut(s)	1164
AciI	CCGC	7 cut(s)	221, 258, 305, 432, 1145, 1174, 1553
AclWI	GGATC	3 cut(s)	470, 1469, 1510
AcsI	RAATTY	4 cut(s)	891, 977, 1251, 1487
AfaI	GTAC	3 cut(s)	443, 658, 1188
AfiI	CCNNNNNNNGG	5 cut(s)	485, 575, 733, 1526, 1570
AgeI	ACCGGT	1 cut(s)	1720
AgsI	TTSAA	8 cut(s)	22, 56, 419, 976, 983, 1058, 1195, 1810
AjiI	CACGTC	1 cut(s)	1436
AjnI	CCWGG	3 cut(s)	904, 1617, 1654
AleI	CACNNNNGTG	1 cut(s)	1571
Alw26I	GTCTC	2 cut(s)	369, 1619
AlwI	GGATC	3 cut(s)	470, 1469, 1510
Ama87I	CYCGRG	1 cut(s)	60
AoxI	GGCC	4 cut(s)	106, 197, 228, 723
ApeKI	GCWGC	3 cut(s)	878, 1643, 1750
ApoI	RAATTY	4 cut(s)	891, 977, 1251, 1487
ArsI	GACNNNNNNTTYG	2 cut(s)	112, 144
AseI	ATTAAT	1 cut(s)	942
AsiGI	ACCGGT	1 cut(s)	1720
Asp700I	GAANNNNTTC	2 cut(s)	525, 1771
AspS9I	GGNCC	9 cut(s)	70, 106, 197, 228, 255, 724, 1207, 1529, 1555
AsuC2I	CCSGG	1 cut(s)	271
AsuHPI	GGTGA	4 cut(s)	1481, 1508, 1585, 1735
AsuII	TTCGAA	1 cut(s)	529
AvaI	CYCGRG	1 cut(s)	60
AvaII	GGWCC	5 cut(s)	70, 255, 1207, 1529, 1555
BaeI	ACNNNNGTAYC	2 cut(s)	1019, 1052
BanI	GGYRCC	2 cut(s)	332, 967
BanII	GRGCYC	1 cut(s)	51
BbsI	GAAGAC	2 cut(s)	519, 1597
BbvCI	CCTCAGC	1 cut(s)	12
BbvI	GCAGC	3 cut(s)	890, 1630, 1737
BccI	CCATC	8 cut(s)	280, 477, 644, 1296, 1313, 1361, 1423, 1621
BceAI	ACGGC	1 cut(s)	184
BcgI	CGANNNNNNTGC	2 cut(s)	418, 452
BciT130I	CCWGG	3 cut(s)	906, 1619, 1656
BcnI	CCSGG	1 cut(s)	271
BcoDI	GTCTC	2 cut(s)	369, 1619
BfaI	CTAG	3 cut(s)	845, 1010, 1837
BglII	AGATCT	1 cut(s)	1115
BisI	GCNGC	5 cut(s)	433, 879, 1145, 1644, 1751
BlsI	GCNGC	5 cut(s)	434, 880, 1146, 1645, 1752
Bme1390I	CCNGG	4 cut(s)	271, 906, 1619, 1656
Bme18I	GGWCC	5 cut(s)	70, 255, 1207, 1529, 1555
BmeT110I	CYCGRG	1 cut(s)	60
BmgBI	CACGTC	1 cut(s)	1436
BmgT120I	GGNCC	9 cut(s)	70, 106, 197, 228, 255, 724, 1207, 1529, 1555
BmiI	GGNNCC	5 cut(s)	275, 334, 726, 969, 1209
BmrFI	CCNGG	4 cut(s)	271, 906, 1619, 1656
BmrI	ACTGGG	2 cut(s)	235, 883
BmsI	GCATC	6 cut(s)	292, 482, 779, 1039, 1108, 1621
BmuI	ACTGGG	2 cut(s)	235, 883
BpiI	GAAGAC	2 cut(s)	519, 1597
BplI	GAGNNNNNCTC	2 cut(s)	244, 276
BpmI	CTGGAG	3 cut(s)	207, 260, 888
Bpu10I	CCTNAGC	2 cut(s)	12, 1429
Bpu14I	TTCGAA	1 cut(s)	529
BpuEI	CTTGAG	1 cut(s)	732
BpuMI	CCSGG	1 cut(s)	271
BsaJI	CCNNGG	3 cut(s)	574, 905, 1182
BsaWI	WCCGGW	1 cut(s)	1720
BsaXI	ACNNNNNCTCC	2 cut(s)	436, 466
Bsc4I	CCNNNNNNNGG	5 cut(s)	485, 575, 733, 1526, 1570
Bse118I	RCCGGY	1 cut(s)	1720
Bse1I	ACTGG	4 cut(s)	230, 878, 1267, 1498
Bse3DI	GCAATG	1 cut(s)	1638
BseBI	CCWGG	3 cut(s)	906, 1619, 1656
BseDI	CCNNGG	3 cut(s)	574, 905, 1182
BseGI	GGATG	5 cut(s)	770, 1099, 1307, 1324, 1636
BseLI	CCNNNNNNNGG	5 cut(s)	485, 575, 733, 1526, 1570
BseMI	GCAATG	1 cut(s)	1638
BseMII	CTCAG	5 cut(s)	170, 204, 381, 1058, 1560
BseNI	ACTGG	4 cut(s)	230, 878, 1267, 1498
BseXI	GCAGC	3 cut(s)	890, 1630, 1737
Bsh1236I	CGCG	1 cut(s)	1164
Bsh1285I	CGRYCG	1 cut(s)	811
BshFI	GGCC	4 cut(s)	108, 199, 230, 725
BshNI	GGYRCC	2 cut(s)	332, 967
BshTI	ACCGGT	1 cut(s)	1720
BsiEI	CGRYCG	1 cut(s)	811
BsiHKCI	CYCGRG	1 cut(s)	60
BsiSI	CCGG	2 cut(s)	271, 1721
BslI	CCNNNNNNNGG	5 cut(s)	485, 575, 733, 1526, 1570
BsmAI	GTCTC	2 cut(s)	369, 1619
BsmBI	CGTCTC	1 cut(s)	369
BsmI	GAATGC	1 cut(s)	214
BsnI	GGCC	4 cut(s)	108, 199, 230, 725
BsoBI	CYCGRG	1 cut(s)	60
Bsp119I	TTCGAA	1 cut(s)	529
Bsp1286I	GDGCHC	1 cut(s)	51
Bsp143I	GATC	8 cut(s)	475, 808, 864, 1115, 1279, 1474, 1502, 1515
BspACI	CCGC	7 cut(s)	221, 258, 305, 432, 1145, 1174, 1553
BspANI	GGCC	4 cut(s)	108, 199, 230, 725
BspCNI	CTCAG	6 cut(s)	4, 171, 205, 382, 1059, 1559
BspFNI	CGCG	1 cut(s)	1164
BspLI	GGNNCC	5 cut(s)	275, 334, 726, 969, 1209
BspPI	GGATC	3 cut(s)	470, 1469, 1510
BspT104I	TTCGAA	1 cut(s)	529
BspT107I	GGYRCC	2 cut(s)	332, 967
BsrBI	CCGCTC	2 cut(s)	260, 432
BsrDI	GCAATG	1 cut(s)	1638
BsrFI	RCCGGY	1 cut(s)	1720
BsrI	ACTGG	4 cut(s)	230, 878, 1267, 1498
BssAI	RCCGGY	1 cut(s)	1720
BssECI	CCNNGG	3 cut(s)	574, 905, 1182
BssMI	GATC	8 cut(s)	475, 808, 864, 1115, 1279, 1474, 1502, 1515
BssNAI	GTATAC	1 cut(s)	176
BssT1I	CCWWGG	2 cut(s)	574, 1182
Bst1107I	GTATAC	1 cut(s)	176
Bst2UI	CCWGG	3 cut(s)	906, 1619, 1656
Bst4CI	ACNGT	5 cut(s)	509, 740, 763, 987, 1191
Bst6I	CTCTTC	1 cut(s)	579
BstBI	TTCGAA	1 cut(s)	529
BstC8I	GCNNGC	6 cut(s)	430, 437, 557, 1142, 1162, 1715
BstDEI	CTNAG	8 cut(s)	12, 179, 213, 390, 706, 1067, 1429, 1546
BstF5I	GGATG	5 cut(s)	770, 1099, 1307, 1324, 1636
BstFNI	CGCG	1 cut(s)	1164
BstKTI	GATC	8 cut(s)	478, 811, 867, 1118, 1282, 1477, 1505, 1518
BstMAI	GTCTC	2 cut(s)	369, 1619
BstMBI	GATC	8 cut(s)	475, 808, 864, 1115, 1279, 1474, 1502, 1515
BstMCI	CGRYCG	1 cut(s)	811
BstMWI	GCNNNNNNNGC	7 cut(s)	218, 227, 386, 565, 1166, 1460, 1640
BstNI	CCWGG	3 cut(s)	906, 1619, 1656
BstNSI	RCATGY	3 cut(s)	439, 630, 806
BstSCI	CCNGG	4 cut(s)	269, 904, 1617, 1654
BstUI	CGCG	1 cut(s)	1164
BstV1I	GCAGC	3 cut(s)	890, 1630, 1737
BstV2I	GAAGAC	2 cut(s)	519, 1597
BstX2I	RGATCY	3 cut(s)	475, 1115, 1474
BstXI	CCANNNNNNTGG	1 cut(s)	766
BstYI	RGATCY	3 cut(s)	475, 1115, 1474
BstZ17I	GTATAC	1 cut(s)	176
BsuRI	GGCC	4 cut(s)	108, 199, 230, 725
BtrI	CACGTC	1 cut(s)	1436
BtsCI	GGATG	5 cut(s)	770, 1099, 1307, 1324, 1636
BtsI	GCAGTG	1 cut(s)	199
BtsIMutI	CAGTG	6 cut(s)	199, 514, 516, 759, 1298, 1491
Cac8I	GCNNGC	6 cut(s)	430, 437, 557, 1142, 1162, 1715
Cfr10I	RCCGGY	1 cut(s)	1720
Cfr13I	GGNCC	9 cut(s)	70, 106, 197, 228, 255, 724, 1207, 1529, 1555
CpoI	CGGWCCG	1 cut(s)	1555
CseI	GACGC	2 cut(s)	116, 386
Csp6I	GTAC	3 cut(s)	442, 657, 1187
CspAI	ACCGGT	1 cut(s)	1720
CspI	CGGWCCG	1 cut(s)	1555
CviQI	GTAC	3 cut(s)	442, 657, 1187
DdeI	CTNAG	8 cut(s)	12, 179, 213, 390, 706, 1067, 1429, 1546
DpnI	GATC	8 cut(s)	477, 810, 866, 1117, 1281, 1476, 1504, 1517
DpnII	GATC	8 cut(s)	475, 808, 864, 1115, 1279, 1474, 1502, 1515
Eam1104I	CTCTTC	1 cut(s)	579
EarI	CTCTTC	1 cut(s)	579
EciI	GGCGGA	1 cut(s)	236
Eco130I	CCWWGG	2 cut(s)	574, 1182
Eco24I	GRGCYC	1 cut(s)	51
Eco32I	GATATC	4 cut(s)	1289, 1444, 1537, 1584
Eco47I	GGWCC	5 cut(s)	70, 255, 1207, 1529, 1555
Eco88I	CYCGRG	1 cut(s)	60
EcoO109I	RGGNCCY	2 cut(s)	70, 1207
EcoRI	GAATTC	2 cut(s)	1251, 1487
EcoRII	CCWGG	3 cut(s)	904, 1617, 1654
EcoRV	GATATC	4 cut(s)	1289, 1444, 1537, 1584
EcoT14I	CCWWGG	2 cut(s)	574, 1182
EcoT38I	GRGCYC	1 cut(s)	51
ErhI	CCWWGG	2 cut(s)	574, 1182
Esp3I	CGTCTC	1 cut(s)	369
FauNDI	CATATG	3 cut(s)	720, 1480, 1777
FblI	GTMKAC	1 cut(s)	175
Fnu4HI	GCNGC	5 cut(s)	433, 879, 1145, 1644, 1751
FokI	GGATG	5 cut(s)	757, 1086, 1314, 1331, 1643
FriOI	GRGCYC	1 cut(s)	51
Fsp4HI	GCNGC	5 cut(s)	433, 879, 1145, 1644, 1751
FspBI	CTAG	3 cut(s)	845, 1010, 1837
GluI	GCNGC	5 cut(s)	433, 879, 1145, 1644, 1751
GsuI	CTGGAG	3 cut(s)	207, 260, 888
HaeIII	GGCC	4 cut(s)	108, 199, 230, 725
HapII	CCGG	2 cut(s)	271, 1721
HgaI	GACGC	2 cut(s)	116, 386
HinfI	GANTC	7 cut(s)	215, 280, 715, 921, 1071, 1560, 1576
HpaII	CCGG	2 cut(s)	271, 1721
HphI	GGTGA	4 cut(s)	1481, 1508, 1585, 1735
Hpy166II	GTNNAC	6 cut(s)	176, 241, 444, 659, 797, 1529
Hpy188I	TCNGA	6 cut(s)	252, 285, 834, 871, 1507, 1581
Hpy188III	TCNNGA	8 cut(s)	263, 277, 734, 884, 1038, 1369, 1439, 1587
Hpy8I	GTNNAC	6 cut(s)	176, 241, 444, 659, 797, 1529
Hpy99I	CGWCG	1 cut(s)	132
HpyAV	CCTTC	5 cut(s)	61, 153, 659, 1366, 1658
HpyCH4III	ACNGT	5 cut(s)	509, 740, 763, 987, 1191
HpyCH4IV	ACGT	1 cut(s)	1435
HpyCH4V	TGCA	8 cut(s)	27, 439, 559, 626, 927, 1140, 1454, 1484
HpyF10VI	GCNNNNNNNGC	7 cut(s)	218, 227, 386, 565, 1166, 1460, 1640
HpyF3I	CTNAG	8 cut(s)	12, 179, 213, 390, 706, 1067, 1429, 1546
HpySE526I	ACGT	1 cut(s)	1435
Kzo9I	GATC	8 cut(s)	475, 808, 864, 1115, 1279, 1474, 1502, 1515
LmnI	GCTCC	3 cut(s)	279, 457, 1507
Lsp1109I	GCAGC	3 cut(s)	890, 1630, 1737
LweI	GCATC	6 cut(s)	292, 482, 779, 1039, 1108, 1621
MaeI	CTAG	3 cut(s)	845, 1010, 1837
MaeII	ACGT	1 cut(s)	1435
MaeIII	GTNAC	4 cut(s)	503, 1258, 1496, 1723
MalI	GATC	8 cut(s)	477, 810, 866, 1117, 1281, 1476, 1504, 1517
MbiI	CCGCTC	2 cut(s)	260, 432
MboI	GATC	8 cut(s)	475, 808, 864, 1115, 1279, 1474, 1502, 1515
MboII	GAAGA	9 cut(s)	501, 524, 596, 621, 1207, 1217, 1397, 1484, 1602
MfeI	CAATTG	2 cut(s)	1341, 1455
MflI	RGATCY	3 cut(s)	475, 1115, 1474
MhlI	GDGCHC	1 cut(s)	51
MlyI	GAGTC	2 cut(s)	224, 1080
MmeI	TCCRAC	3 cut(s)	625, 1360, 1744
MroXI	GAANNNNTTC	2 cut(s)	525, 1771
MseI	TTAA	6 cut(s)	153, 852, 942, 1598, 1743, 1757
MslI	CAYNNNNRTG	4 cut(s)	764, 962, 1275, 1571
MspA1I	CMGCKG	2 cut(s)	783, 1750
MspI	CCGG	2 cut(s)	271, 1721
MspR9I	CCNGG	4 cut(s)	271, 906, 1619, 1656
MunI	CAATTG	2 cut(s)	1341, 1455
Mva1269I	GAATGC	1 cut(s)	214
MvaI	CCWGG	3 cut(s)	906, 1619, 1656
MvnI	CGCG	1 cut(s)	1164
MwoI	GCNNNNNNNGC	7 cut(s)	218, 227, 386, 565, 1166, 1460, 1640
NciI	CCSGG	1 cut(s)	271
NdeI	CATATG	3 cut(s)	720, 1480, 1777
NdeII	GATC	8 cut(s)	475, 808, 864, 1115, 1279, 1474, 1502, 1515
NlaIV	GGNNCC	5 cut(s)	275, 334, 726, 969, 1209
NmuCI	GTSAC	2 cut(s)	1496, 1723
NspI	RCATGY	3 cut(s)	439, 630, 806
NspV	TTCGAA	1 cut(s)	529
OliI	CACNNNNGTG	1 cut(s)	1571
PaeI	GCATGC	1 cut(s)	439
PaeR7I	CTCGAG	1 cut(s)	60
PctI	GAATGC	1 cut(s)	214
PdmI	GAANNNNTTC	2 cut(s)	525, 1771
PfeI	GAWTC	5 cut(s)	280, 715, 921, 1560, 1576
PfoI	TCCNGGA	1 cut(s)	1617
PinAI	ACCGGT	1 cut(s)	1720
PkrI	GCNGC	5 cut(s)	434, 880, 1146, 1645, 1752
Ple19I	CGATCG	1 cut(s)	811
PleI	GAGTC	2 cut(s)	223, 1079
PpsI	GAGTC	2 cut(s)	223, 1079
PpuMI	RGGWCCY	2 cut(s)	70, 1207
PshBI	ATTAAT	1 cut(s)	942
Psp5II	RGGWCCY	2 cut(s)	70, 1207
Psp6I	CCWGG	3 cut(s)	904, 1617, 1654
PspGI	CCWGG	3 cut(s)	904, 1617, 1654
PspN4I	GGNNCC	5 cut(s)	275, 334, 726, 969, 1209
PspPI	GGNCC	9 cut(s)	70, 106, 197, 228, 255, 724, 1207, 1529, 1555
PspPPI	RGGWCCY	2 cut(s)	70, 1207
PspXI	VCTCGAGB	1 cut(s)	60
PsuI	RGATCY	3 cut(s)	475, 1115, 1474
PvuI	CGATCG	1 cut(s)	811
PvuII	CAGCTG	2 cut(s)	783, 1750
RsaI	GTAC	3 cut(s)	443, 658, 1188
RsaNI	GTAC	3 cut(s)	442, 657, 1187
RseI	CAYNNNNRTG	4 cut(s)	764, 962, 1275, 1571
Rsr2I	CGGWCCG	1 cut(s)	1555
RsrII	CGGWCCG	1 cut(s)	1555
SaqAI	TTAA	6 cut(s)	153, 852, 942, 1598, 1743, 1757
SatI	GCNGC	5 cut(s)	433, 879, 1145, 1644, 1751
Sau3AI	GATC	8 cut(s)	475, 808, 864, 1115, 1279, 1474, 1502, 1515
Sau96I	GGNCC	9 cut(s)	70, 106, 197, 228, 255, 724, 1207, 1529, 1555
SchI	GAGTC	2 cut(s)	224, 1080
ScrFI	CCNGG	4 cut(s)	271, 906, 1619, 1656
SduI	GDGCHC	1 cut(s)	51
SfaNI	GCATC	6 cut(s)	292, 482, 779, 1039, 1108, 1621
Sfr274I	CTCGAG	1 cut(s)	60
SfuI	TTCGAA	1 cut(s)	529
SinI	GGWCC	5 cut(s)	70, 255, 1207, 1529, 1555
SlaI	CTCGAG	1 cut(s)	60
SmiMI	CAYNNNNRTG	4 cut(s)	764, 962, 1275, 1571
SmlI	CTYRAG	2 cut(s)	60, 747
SmoI	CTYRAG	2 cut(s)	60, 747
SphI	GCATGC	1 cut(s)	439
SsiI	CCGC	7 cut(s)	221, 258, 305, 432, 1145, 1174, 1553
SspMI	CTAG	3 cut(s)	845, 1010, 1837
StyD4I	CCNGG	4 cut(s)	269, 904, 1617, 1654
StyI	CCWWGG	2 cut(s)	574, 1182
TaaI	ACNGT	5 cut(s)	509, 740, 763, 987, 1191
TaiI	ACGT	1 cut(s)	1438
TaqI	TCGA	5 cut(s)	61, 264, 529, 1095, 1707
TaqII	GACCGA	1 cut(s)	1572
TatI	WGTACW	1 cut(s)	441
TauI	GCSGC	2 cut(s)	435, 1147
TfiI	GAWTC	5 cut(s)	280, 715, 921, 1560, 1576
Tru1I	TTAA	6 cut(s)	153, 852, 942, 1598, 1743, 1757
Tru9I	TTAA	6 cut(s)	153, 852, 942, 1598, 1743, 1757
TscAI	CASTG	6 cut(s)	199, 514, 523, 766, 1298, 1498
TseFI	GTSAC	2 cut(s)	1496, 1723
TseI	GCWGC	3 cut(s)	878, 1643, 1750
Tsp45I	GTSAC	2 cut(s)	1496, 1723
TspDTI	ATGAA	6 cut(s)	299, 597, 678, 707, 1627, 1764
TspRI	CASTG	6 cut(s)	199, 514, 523, 766, 1298, 1498
VpaK11BI	GGWCC	5 cut(s)	70, 255, 1207, 1529, 1555
VspI	ATTAAT	1 cut(s)	942
XapI	RAATTY	4 cut(s)	891, 977, 1251, 1487
XceI	RCATGY	3 cut(s)	439, 630, 806
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1376
XhoI	CTCGAG	1 cut(s)	60
XmiI	GTMKAC	1 cut(s)	175
XmnI	GAANNNNTTC	2 cut(s)	525, 1771
XspI	CTAG	3 cut(s)	845, 1010, 1837

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.