Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0001232

Physical Location & Seq

Genomic Coordinates Forward (+)

85580777 .. 85584286

Gene Structure 3510 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000036839

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1803 bp

ATGGAAACAGTTGAGAACTTAAATTGCATATACAGAAACCCAAACGAACCCATTGAAGCTCGAGTCAAGGACCTCCTTTCTCGCATGACTTTGAAAGAAGAGGTGGGGCAGATGACCCAGATAGAGCGTCAGGTCGCTACACCTTCTGCCATTAAAGACTTCTCAATCGGGAGTGTAACCAGTGGTGCAGGAAGTGGGCCGTTTAGGAAGGCTTTATCGGCGGACTGGGCCGATATGGTTGACGGGTTTCAGAGGTGTGCGCTGGAAACCCGGCTCCGGATTCCATTGATATATGGGATTGATGCTGTTCATGGGAACAATAGCGTCTCCCATGCGGATTTGGCTCAAAGGATTGGTGAGGCAACTGCTTTTGAAGTCAGGGCTAGTGGGATTCACTACACTTTTGCTCCCTGTGTAGCTGTATGCAGAGATCCCAGGTGGGGACGATGCTATGAGAGTTACAGCGAAGACACTGAAATTGTTAGAAAGATGACATCCATTATCCAAGGGCATGAAAATGGTTGCCCCTTTATAATGGGAAGAAACAACACTATTGCATGTGCCAAGCATTTTGTTGGAGATGGCGGTACACATAAAGGTATAAATGAGGGAAATACCCTATCATCTTACGATGACTTAGAGAGGATTCATATGGCGCCTTATCTGGACTGCATTTCCCAAGGAGTTTCCACTATTATGGCATCTTATTCCAGCTGGAATGGAAATAGACTACATGCTGATCGTTTTCTCCTGACTGAAATCTTGAAAGAAAAGCTTGGATTTAAGGGAATTGTGATTTCTGACTGGGATGGTATTGAAACAATCAGTGAGCCTCAAGGGTCAAACTATCGTTTCTGCATTTTATCTGCTGTCAATGCTGGAATTGATATGGTAGATATTGAACTACAATTGCCATACGATTTATTTGAAAATTTTGTGGATGATTTAGTATATCTGGTGGAACATGGGGAGATACCAATGTCCAGGATAGATGATGCTGTTGAGAGAATACTGAGAGTAAAGTTTGTTGCTGGTCTTTTTGAACATCCCTTTACTGATAGATCTTTGCTGGACAAAGTTGGTTGTAAGCTGCATAGGGATCTGGCACGTGAAGCTGTTCGCAAGTCATTGGTTCTGTTGAAGAATGGAAAGGAGCCAAGAAAACCTTTACTTCCATTAGATAGAAAGGCCAAAAGAATACTGGTTACCGGAACGCATGCTGATGATCTTGGATATCAGTGTGGAGGATGGACAGTTACTAAGACTGGATTAAGTGGCAGGTTCACCGTTGGCACAACCATCTTGGAAGCTATCAAGAAGGCAGTTGGAGAGGAAACAGAAATAATTTATGAGCAACTGCCATTGACGGATACCCTAGCACGTGACGATATCTCTTTTGCAGTTGTGGCTGTTGGTGAATGTTCATATGTCGAATGCAAGGGCGACAACTTGGAGCTTGTGATTCCTTTTAATGGACCCGATGTAATAAGCTCAGTCGCTGACAGAATCCCCACATTGGTGATTCTAATATCTGGAAGACCCTTAACTATAGAGCCAAGTCTCTTGGAAAAGATGGATGCTCTTGTTGCTGCTTGGTTGCCTGGTAGTGAAGGAGAGGGAATTGCAGATGTTATCTTTGGAGATTATAACTTCGAGGGCAAGCTACCGGTGACATGGTTTAAAAGTGTTGAACAGCTCCCATTGGATGTCGGAAGCAACTCATATGACCCTTTATATCCTCTTGGGTTTGGATTGACATGCAATACGGAGAAAGTTATACACCAAACAGATTTTGATAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0000323 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005886 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0015926 GO:0016020 GO:0016052 GO:0016787 GO:0016798 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0071944 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

601

Amino Acids

66.35

Weight (kDa)

5.05

Isoelectric Point (pI)

26.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	30 - 340	9.8e-56	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	377 - 586	4e-38	Glycosyl hydrolase family 3 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001232)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47000 AT3G47000 AT3G47000 AT3G47010 AT3G47010 AT3G47010 AT3G47040 AT3G47040 AT3G47040 AT3G47050
fragaria_vesca	FvH4_3g38160 FvH4_3g38160 FvH4_4g11940
malus_domestica	MD02G1242000.v1.1 MD02G1242100.v1.1 MD02G1242200.v1.1 MD02G1242300.v1.1 MD11G1080700.v1.1
prunus_persica	Prupe.2G092300_v2.0.a1 Prupe.2G092300_v2.0.a1 Prupe.2G092300_v2.0.a1 Prupe.2G092600_v2.0.a1 Prupe.2G092900_v2.0.a1 Prupe.2G092900_v2.0.a1 Prupe.6G061000_v2.0.a1 Prupe.6G061000_v2.0.a1 Prupe.6G061000_v2.0.a1 Prupe.6G061000_v2.0.a1 Prupe.6G061000_v2.0.a1
pyrus_communis	pycom02g20900 pycom11g06800 pycom11g06860
rosa_chinensis	RchiOBHm_Chr5g0068591 RchiOBHm_Chr6g0246121
rosa_laevigata	RLG00000035983 RLG00000036820 RLG00000036839
rosa_multiflora	Rmu_sc0004721.1_g000003
rosa_roxburghii	Rroxscaffold_1G00003560 Rroxscaffold_1G00012260 Rroxscaffold_3G00247860 Rroxscaffold_7G00214870
rosa_rugosa	Rorug05G0391700 Rorug05G0464600 Rorug05G0465200 Rorug05G0465800
rosa_samantha	Rh5AG449400 Rh5BG467600 Rh5DG481000 Rh5DG551200 Rh5DG552100 Rh7AG258000 Rh7CG274700 Rh7DG265200
rosa_wichuraiana	Rw5G041960 Rw5G048090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	533, 1647
Acc36I	ACCTGC	1 cut(s)	1269
AccB1I	GGYRCC	1 cut(s)	655
AccIII	TCCGGA	1 cut(s)	276
AciI	CCGC	3 cut(s)	221, 335, 585
AclWI	GGATC	2 cut(s)	425, 1107
AcsI	RAATTY	1 cut(s)	931
AcvI	CACGTG	2 cut(s)	1109, 1382
AcyI	GRCGYC	1 cut(s)	656
AfaI	GTAC	1 cut(s)	589
AfiI	CCNNNNNNNGG	4 cut(s)	276, 440, 1472, 1516
AgeI	ACCGGT	1 cut(s)	1666
AjnI	CCWGG	3 cut(s)	434, 983, 1600
AleI	CACNNNNGTG	1 cut(s)	1517
Alw26I	GTCTC	2 cut(s)	331, 1565
AlwI	GGATC	2 cut(s)	425, 1107
AlwNI	CAGNNNCTG	1 cut(s)	1499
Ama87I	CYCGRG	1 cut(s)	60
Aor13HI	TCCGGA	1 cut(s)	276
AoxI	GGCC	3 cut(s)	197, 228, 1188
ApeKI	GCWGC	2 cut(s)	1090, 1589
ApoI	RAATTY	1 cut(s)	931
AsiGI	ACCGGT	1 cut(s)	1666
Asp700I	GAANNNNTTC	1 cut(s)	1116
AspLEI	GCGC	2 cut(s)	262, 658
AspS9I	GGNCC	4 cut(s)	70, 197, 228, 1475
AsuC2I	CCSGG	1 cut(s)	271
AsuHPI	GGTGA	5 cut(s)	368, 1276, 1427, 1531, 1681
AvaI	CYCGRG	1 cut(s)	60
AvaII	GGWCC	2 cut(s)	70, 1475
BaeI	ACNNNNGTAYC	2 cut(s)	965, 998
BanI	GGYRCC	1 cut(s)	655
BbrPI	CACGTG	2 cut(s)	1109, 1382
BbsI	GAAGAC	2 cut(s)	474, 1543
BbvI	GCAGC	2 cut(s)	1077, 1576
BccI	CCATC	5 cut(s)	575, 803, 1242, 1307, 1567
BceAI	ACGGC	1 cut(s)	184
BciT130I	CCWGG	3 cut(s)	436, 985, 1602
BciVI	GTATCC	1 cut(s)	1363
BcnI	CCSGG	1 cut(s)	271
BcoDI	GTCTC	2 cut(s)	331, 1565
BfaI	CTAG	2 cut(s)	384, 1376
BfmI	CTRYAG	1 cut(s)	1548
BfoI	RGCGCY	1 cut(s)	659
BfuAI	ACCTGC	1 cut(s)	1269
BfuI	GTATCC	1 cut(s)	1363
BglII	AGATCT	1 cut(s)	1061
BisI	GCNGC	2 cut(s)	1091, 1590
BlsI	GCNGC	2 cut(s)	1092, 1591
Bme1390I	CCNGG	4 cut(s)	271, 436, 985, 1602
Bme18I	GGWCC	2 cut(s)	70, 1475
BmeT110I	CYCGRG	1 cut(s)	60
BmgT120I	GGNCC	4 cut(s)	70, 197, 228, 1475
BmiI	GGNNCC	4 cut(s)	275, 657, 1155, 1477
BmrFI	CCNGG	4 cut(s)	271, 436, 985, 1602
BmrI	ACTGGG	2 cut(s)	235, 814
BmsI	GCATC	5 cut(s)	292, 437, 710, 985, 1567
BmuI	ACTGGG	2 cut(s)	235, 814
BpiI	GAAGAC	2 cut(s)	474, 1543
BpuEI	CTTGAG	1 cut(s)	819
BpuMI	CCSGG	1 cut(s)	271
BsaAI	YACGTR	2 cut(s)	1109, 1382
BsaHI	GRCGYC	1 cut(s)	656
BsaJI	CCNNGG	3 cut(s)	434, 505, 679
BsaWI	WCCGGW	3 cut(s)	276, 1208, 1666
BsaXI	ACNNNNNCTCC	2 cut(s)	391, 421
Bsc4I	CCNNNNNNNGG	4 cut(s)	276, 440, 1472, 1516
Bse118I	RCCGGY	1 cut(s)	1666
Bse1I	ACTGG	5 cut(s)	180, 230, 809, 1206, 1270
BseAI	TCCGGA	1 cut(s)	276
BseBI	CCWGG	3 cut(s)	436, 985, 1602
BseDI	CCNNGG	3 cut(s)	434, 505, 679
BseGI	GGATG	7 cut(s)	494, 814, 946, 1045, 1253, 1582, 1711
BseLI	CCNNNNNNNGG	4 cut(s)	276, 440, 1472, 1516
BseMII	CTCAG	2 cut(s)	1004, 1506
BseNI	ACTGG	5 cut(s)	180, 230, 809, 1206, 1270
BseXI	GCAGC	2 cut(s)	1077, 1576
BsgI	GTGCAG	1 cut(s)	207
BshFI	GGCC	3 cut(s)	199, 230, 1190
BshNI	GGYRCC	1 cut(s)	655
BshTI	ACCGGT	1 cut(s)	1666
BsiHKCI	CYCGRG	1 cut(s)	60
BsiSI	CCGG	4 cut(s)	271, 277, 1209, 1667
BslFI	GGGAC	1 cut(s)	456
BslI	CCNNNNNNNGG	4 cut(s)	276, 440, 1472, 1516
BsmAI	GTCTC	2 cut(s)	331, 1565
BsmBI	CGTCTC	1 cut(s)	331
BsmFI	GGGAC	1 cut(s)	456
BsmI	GAATGC	1 cut(s)	1439
BsnI	GGCC	3 cut(s)	199, 230, 1190
BsoBI	CYCGRG	1 cut(s)	60
Bsp13I	TCCGGA	1 cut(s)	276
Bsp143I	GATC	5 cut(s)	430, 739, 1061, 1099, 1225
BspACI	CCGC	3 cut(s)	221, 335, 585
BspANI	GGCC	3 cut(s)	199, 230, 1190
BspCNI	CTCAG	2 cut(s)	1005, 1505
BspEI	TCCGGA	1 cut(s)	276
BspLI	GGNNCC	4 cut(s)	275, 657, 1155, 1477
BspMI	ACCTGC	1 cut(s)	1269
BspPI	GGATC	2 cut(s)	425, 1107
BspT107I	GGYRCC	1 cut(s)	655
BsrFI	RCCGGY	1 cut(s)	1666
BsrI	ACTGG	5 cut(s)	180, 230, 809, 1206, 1270
BssAI	RCCGGY	1 cut(s)	1666
BssECI	CCNNGG	3 cut(s)	434, 505, 679
BssMI	GATC	5 cut(s)	430, 739, 1061, 1099, 1225
BssNI	GRCGYC	1 cut(s)	656
BssT1I	CCWWGG	2 cut(s)	505, 679
Bst2UI	CCWGG	3 cut(s)	436, 985, 1602
Bst4CI	ACNGT	3 cut(s)	10, 1255, 1288
Bst6I	CTCTTC	1 cut(s)	93
BstACI	GRCGYC	1 cut(s)	656
BstBAI	YACGTR	2 cut(s)	1109, 1382
BstC8I	GCNNGC	2 cut(s)	1218, 1661
BstDEI	CTNAG	4 cut(s)	637, 1013, 1260, 1492
BstEII	GGTNACC	1 cut(s)	1204
BstF5I	GGATG	7 cut(s)	494, 814, 946, 1045, 1253, 1582, 1711
BstH2I	RGCGCY	1 cut(s)	659
BstHHI	GCGC	2 cut(s)	262, 658
BstKTI	GATC	5 cut(s)	433, 742, 1064, 1102, 1228
BstMAI	GTCTC	2 cut(s)	331, 1565
BstMBI	GATC	5 cut(s)	430, 739, 1061, 1099, 1225
BstMWI	GCNNNNNNNGC	7 cut(s)	218, 227, 341, 875, 1112, 1406, 1586
BstNI	CCWGG	3 cut(s)	436, 985, 1602
BstNSI	RCATGY	4 cut(s)	561, 737, 1220, 1761
BstPI	GGTNACC	1 cut(s)	1204
BstSCI	CCNGG	4 cut(s)	269, 434, 983, 1600
BstSFI	CTRYAG	1 cut(s)	1548
BstV1I	GCAGC	2 cut(s)	1077, 1576
BstV2I	GAAGAC	2 cut(s)	474, 1543
BstX2I	RGATCY	3 cut(s)	430, 1061, 1099
BstXI	CCANNNNNNTGG	1 cut(s)	697
BstYI	RGATCY	3 cut(s)	430, 1061, 1099
BsuI	GTATCC	1 cut(s)	1363
BsuRI	GGCC	3 cut(s)	199, 230, 1190
BtsCI	GGATG	7 cut(s)	494, 814, 946, 1045, 1253, 1582, 1711
BtsIMutI	CAGTG	4 cut(s)	187, 471, 832, 1244
BveI	ACCTGC	1 cut(s)	1269
Cac8I	GCNNGC	2 cut(s)	1218, 1661
CaiI	CAGNNNCTG	1 cut(s)	1499
CfoI	GCGC	2 cut(s)	262, 658
Cfr10I	RCCGGY	1 cut(s)	1666
Cfr13I	GGNCC	4 cut(s)	70, 197, 228, 1475
CseI	GACGC	2 cut(s)	116, 313
Csp6I	GTAC	1 cut(s)	588
CspAI	ACCGGT	1 cut(s)	1666
CviQI	GTAC	1 cut(s)	588
DdeI	CTNAG	4 cut(s)	637, 1013, 1260, 1492
DinI	GGCGCC	1 cut(s)	657
DpnI	GATC	5 cut(s)	432, 741, 1063, 1101, 1227
DpnII	GATC	5 cut(s)	430, 739, 1061, 1099, 1225
DraI	TTTAAA	1 cut(s)	1681
Eam1104I	CTCTTC	1 cut(s)	93
EarI	CTCTTC	1 cut(s)	93
EciI	GGCGGA	1 cut(s)	236
Eco130I	CCWWGG	2 cut(s)	505, 679
Eco32I	GATATC	2 cut(s)	1235, 1390
Eco47I	GGWCC	2 cut(s)	70, 1475
Eco72I	CACGTG	2 cut(s)	1109, 1382
Eco88I	CYCGRG	1 cut(s)	60
Eco91I	GGTNACC	1 cut(s)	1204
EcoO109I	RGGNCCY	1 cut(s)	70
EcoO65I	GGTNACC	1 cut(s)	1204
EcoRII	CCWGG	3 cut(s)	434, 983, 1600
EcoRV	GATATC	2 cut(s)	1235, 1390
EcoT14I	CCWWGG	2 cut(s)	505, 679
EgeI	GGCGCC	1 cut(s)	657
EheI	GGCGCC	1 cut(s)	657
ErhI	CCWWGG	2 cut(s)	505, 679
Esp3I	CGTCTC	1 cut(s)	331
FalI	AAGNNNNNCTT	4 cut(s)	759, 791, 1150, 1182
FaqI	GGGAC	1 cut(s)	456
FauNDI	CATATG	3 cut(s)	651, 1426, 1723
Fnu4HI	GCNGC	2 cut(s)	1091, 1590
FokI	GGATG	7 cut(s)	481, 821, 953, 1032, 1260, 1589, 1718
Fsp4HI	GCNGC	2 cut(s)	1091, 1590
FspBI	CTAG	2 cut(s)	384, 1376
GlaI	GCGC	2 cut(s)	261, 657
GluI	GCNGC	2 cut(s)	1091, 1590
HaeII	RGCGCY	1 cut(s)	659
HaeIII	GGCC	3 cut(s)	199, 230, 1190
HapII	CCGG	4 cut(s)	271, 277, 1209, 1667
HgaI	GACGC	2 cut(s)	116, 313
HhaI	GCGC	2 cut(s)	262, 658
Hin1I	GRCGYC	1 cut(s)	656
Hin6I	GCGC	2 cut(s)	260, 656
HinP1I	GCGC	2 cut(s)	260, 656
HincII	GTYRAC	1 cut(s)	241
HindII	GTYRAC	1 cut(s)	241
HindIII	AAGCTT	1 cut(s)	773
HinfI	GANTC	7 cut(s)	63, 280, 391, 646, 1462, 1506, 1522
HpaII	CCGG	4 cut(s)	271, 277, 1209, 1667
HphI	GGTGA	5 cut(s)	368, 1276, 1427, 1531, 1681
Hpy166II	GTNNAC	3 cut(s)	241, 590, 1284
Hpy188I	TCNGA	3 cut(s)	252, 802, 1712
Hpy188III	TCNNGA	7 cut(s)	169, 277, 665, 751, 763, 1315, 1533
Hpy8I	GTNNAC	3 cut(s)	241, 590, 1284
HpyAV	CCTTC	4 cut(s)	153, 202, 1312, 1604
HpyCH4III	ACNGT	3 cut(s)	10, 1255, 1288
HpyCH4IV	ACGT	2 cut(s)	1108, 1381
HpyF10VI	GCNNNNNNNGC	7 cut(s)	218, 227, 341, 875, 1112, 1406, 1586
HpyF3I	CTNAG	4 cut(s)	637, 1013, 1260, 1492
HpySE526I	ACGT	2 cut(s)	1108, 1381
Hsp92I	GRCGYC	1 cut(s)	656
HspAI	GCGC	2 cut(s)	260, 656
KasI	GGCGCC	1 cut(s)	655
Kpn2I	TCCGGA	1 cut(s)	276
Kzo9I	GATC	5 cut(s)	430, 739, 1061, 1099, 1225
LmnI	GCTCC	5 cut(s)	279, 412, 1153, 1453, 1701
Lsp1109I	GCAGC	2 cut(s)	1077, 1576
LweI	GCATC	5 cut(s)	292, 437, 710, 985, 1567
MaeI	CTAG	2 cut(s)	384, 1376
MaeII	ACGT	2 cut(s)	1108, 1381
MaeIII	GTNAC	6 cut(s)	175, 458, 1204, 1255, 1382, 1669
MalI	GATC	5 cut(s)	432, 741, 1063, 1101, 1227
MboI	GATC	5 cut(s)	430, 739, 1061, 1099, 1225
MboII	GAAGA	5 cut(s)	110, 479, 552, 1153, 1548
MfeI	CAATTG	1 cut(s)	908
MflI	RGATCY	3 cut(s)	430, 1061, 1099
MluCI	AATT	8 cut(s)	22, 477, 789, 882, 908, 931, 1344, 1620
Mly113I	GGCGCC	1 cut(s)	656
MlyI	GAGTC	1 cut(s)	72
MmeI	TCCRAC	3 cut(s)	556, 1306, 1690
MroI	TCCGGA	1 cut(s)	276
MroXI	GAANNNNTTC	1 cut(s)	1116
MseI	TTAA	7 cut(s)	20, 153, 783, 1271, 1470, 1544, 1680
MslI	CAYNNNNRTG	4 cut(s)	516, 695, 1221, 1517
MspA1I	CMGCKG	1 cut(s)	714
MspI	CCGG	4 cut(s)	271, 277, 1209, 1667
MspR9I	CCNGG	4 cut(s)	271, 436, 985, 1602
MunI	CAATTG	1 cut(s)	908
Mva1269I	GAATGC	1 cut(s)	1439
MvaI	CCWGG	3 cut(s)	436, 985, 1602
MwoI	GCNNNNNNNGC	7 cut(s)	218, 227, 341, 875, 1112, 1406, 1586
NarI	GGCGCC	1 cut(s)	656
NciI	CCSGG	1 cut(s)	271
NdeI	CATATG	3 cut(s)	651, 1426, 1723
NdeII	GATC	5 cut(s)	430, 739, 1061, 1099, 1225
NlaIV	GGNNCC	4 cut(s)	275, 657, 1155, 1477
NmuCI	GTSAC	2 cut(s)	1382, 1669
NspI	RCATGY	4 cut(s)	561, 737, 1220, 1761
OliI	CACNNNNGTG	1 cut(s)	1517
PaeI	GCATGC	1 cut(s)	1220
PaeR7I	CTCGAG	1 cut(s)	60
PctI	GAATGC	1 cut(s)	1439
PdmI	GAANNNNTTC	1 cut(s)	1116
PfeI	GAWTC	6 cut(s)	280, 391, 646, 1462, 1506, 1522
PfoI	TCCNGGA	1 cut(s)	983
PinAI	ACCGGT	1 cut(s)	1666
PkrI	GCNGC	2 cut(s)	1092, 1591
PleI	GAGTC	1 cut(s)	71
PluTI	GGCGCC	1 cut(s)	659
PmaCI	CACGTG	2 cut(s)	1109, 1382
PmlI	CACGTG	2 cut(s)	1109, 1382
PpsI	GAGTC	1 cut(s)	71
Ppu21I	YACGTR	2 cut(s)	1109, 1382
PpuMI	RGGWCCY	1 cut(s)	70
PsiI	TTATAA	2 cut(s)	533, 1647
Psp5II	RGGWCCY	1 cut(s)	70
Psp6I	CCWGG	3 cut(s)	434, 983, 1600
PspCI	CACGTG	2 cut(s)	1109, 1382
PspEI	GGTNACC	1 cut(s)	1204
PspGI	CCWGG	3 cut(s)	434, 983, 1600
PspN4I	GGNNCC	4 cut(s)	275, 657, 1155, 1477
PspPI	GGNCC	4 cut(s)	70, 197, 228, 1475
PspPPI	RGGWCCY	1 cut(s)	70
PspXI	VCTCGAGB	1 cut(s)	60
PstNI	CAGNNNCTG	1 cut(s)	1499
PsuI	RGATCY	3 cut(s)	430, 1061, 1099
PvuII	CAGCTG	1 cut(s)	714
RsaI	GTAC	1 cut(s)	589
RsaNI	GTAC	1 cut(s)	588
RseI	CAYNNNNRTG	4 cut(s)	516, 695, 1221, 1517
SaqAI	TTAA	7 cut(s)	20, 153, 783, 1271, 1470, 1544, 1680
SatI	GCNGC	2 cut(s)	1091, 1590
Sau3AI	GATC	5 cut(s)	430, 739, 1061, 1099, 1225
Sau96I	GGNCC	4 cut(s)	70, 197, 228, 1475
SchI	GAGTC	1 cut(s)	72
ScrFI	CCNGG	4 cut(s)	271, 436, 985, 1602
SfaNI	GCATC	5 cut(s)	292, 437, 710, 985, 1567
SfcI	CTRYAG	1 cut(s)	1548
SfoI	GGCGCC	1 cut(s)	657
Sfr274I	CTCGAG	1 cut(s)	60
SinI	GGWCC	2 cut(s)	70, 1475
SlaI	CTCGAG	1 cut(s)	60
SmiMI	CAYNNNNRTG	4 cut(s)	516, 695, 1221, 1517
SmlI	CTYRAG	2 cut(s)	60, 834
SmoI	CTYRAG	2 cut(s)	60, 834
SphI	GCATGC	1 cut(s)	1220
Sse9I	AATT	8 cut(s)	22, 477, 789, 882, 908, 931, 1344, 1620
SsiI	CCGC	3 cut(s)	221, 335, 585
SspDI	GGCGCC	1 cut(s)	655
SspMI	CTAG	2 cut(s)	384, 1376
StyD4I	CCNGG	4 cut(s)	269, 434, 983, 1600
StyI	CCWWGG	2 cut(s)	505, 679
TaaI	ACNGT	3 cut(s)	10, 1255, 1288
TaiI	ACGT	2 cut(s)	1111, 1384
TaqI	TCGA	3 cut(s)	61, 1431, 1653
TasI	AATT	8 cut(s)	22, 477, 789, 882, 908, 931, 1344, 1620
TfiI	GAWTC	6 cut(s)	280, 391, 646, 1462, 1506, 1522
Tru1I	TTAA	7 cut(s)	20, 153, 783, 1271, 1470, 1544, 1680
Tru9I	TTAA	7 cut(s)	20, 153, 783, 1271, 1470, 1544, 1680
TscAI	CASTG	4 cut(s)	187, 478, 832, 1244
TseFI	GTSAC	2 cut(s)	1382, 1669
TseI	GCWGC	2 cut(s)	1090, 1589
Tsp45I	GTSAC	2 cut(s)	1382, 1669
TspDTI	ATGAA	4 cut(s)	299, 528, 638, 1413
TspGWI	ACGGA	2 cut(s)	1382, 1781
TspRI	CASTG	4 cut(s)	187, 478, 832, 1244
VpaK11BI	GGWCC	2 cut(s)	70, 1475
XapI	RAATTY	1 cut(s)	931
XceI	RCATGY	4 cut(s)	561, 737, 1220, 1761
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1198
XhoI	CTCGAG	1 cut(s)	60
XmnI	GAANNNNTTC	1 cut(s)	1116
XspI	CTAG	2 cut(s)	384, 1376

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.