Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0005587

Physical Location & Seq

Genomic Coordinates Forward (+)

1649182 .. 1651032

Gene Structure 1851 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g01780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1569 bp

ATGGAGAGTGTTGTGCCCCTGCATCGTATCCATTGCCTAATCCCACCGACACGGAAGCTCAATCACAGTACCAACAGCTTCCTCTTCCCCAGAACCCTAACCACAAAACCCTCCCCCAAACCCAGAACACCATTCCCTTCTTCTCTCTGCTATTCCCACCCATTTCCTCAACCAAATGTAGCCGCCCCACGCGGTGGTTCTACAAAGCACACCACCCTCCTTGTGGAGACTTTCCATGAACACCAGAGGCTAAAAGACTTACTTGTGAAGGTCACCACCGAGGACTGTTGCCCTTTACAATTGCTTGCAGATGATGGTGATTGGACCAAAGACCAATTTTGGGCTGTCATCACATTCCTCAACAATGTTTCCAGGTCCAAGGAAATTCTTCAGTTGTTTGAGATGTGGAAGAAGATCGAGAAATCGCGGATTAATGAATTCAACTACAGCAAGATAATAGGATTGTTAAGTGAAGAGGGCCTCATGGAAGAGGCTGCGCCATGCTTTCAAGAGATGAAGAGTCATGATCTTAGGCCATCTTTGGAGGTTTACAATTCAATGATTCATGGTTTTGCCAGACAAGGAAACTTTGATGATGCTTTGTTTTACCTTAACGAGATGAGAGAAATGAATGTGGCGCCAGAAACTGATACTTATGATGGGCTTATTGAAGCGTATGGGAAGTATAAAATGTATGATGAGATGGGTATGTGCGTGAAGAAAATGAAACTAAATGGCTGCCCACCTGACCACCTTACATATAATTTGCTTATTCGAGAGTTTTCAAGGGGCGGGTTACTCAAAAGAATGGAAAGTGTGTATCAATCCATGCTTTCTAAGAGAATGTTTTTGCAGTCTTCTACCTTGATTGCAATGCTTGAGGTTTATGCGAAATTTGGGATCTTGGATAAGATGGAAAAGGTTTATATGAGACTGTTGAACTCCAGAACACTGGTGAAGGATGACTTAATTAGGAAACTAGCTGAAGTTTATATCGAGAACTATATGTTTTCGAGATTAGAGAATTTGGGAGTTGATATTTCTTCAAGATTTGGTCAGACTGATCTAGTTTGGTGTCTGCGTCTGCTGTCTCATGCTGGACTTCTTAGTCGAAGAGGAATGGATTCCATTGTCCAAGAGATGAAAGAAGAAAATGCCCCGTGGAATGCAACAGTTGCAAACACAATCATGTTAGCTTATTTGAAGATGAAAGATTTCACACACTTGAGGATCTTGCTCTCTCAATTACTAACCCAGGGTGTGGAGCCAGATATTATCACAGTTGGAATTCTATTTGATGCAAATATGATTGGCTATGACGGGTCTGGGACTTTAGATGCATGGAAAAAGAAGGGCTTGCTCCAAAGATCTGTGGAAATGAATACCGATCCCCTGGTTCTCACCACCTTTGGGAAGGGACATTTCCTTAGAAACTGTGAAGCAGCATTCTCCTCACTTGAACCTGAGGTCAGAGAAAACAAAACCTGGACTTACCATCATCTCATTGATTTAGTCTTAAAACACACCGAATCTAGCCTCATTATGAAGGATGCTATGAAGTCAATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

523

Amino Acids

60.04

Weight (kDa)

7.25

Isoelectric Point (pI)

43.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	129 - 229	4.6e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	169 - 228	1.5e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	180 - 227	2.4e-09	PPR repeat family
PPR	PF01535	183 - 212	1.8e-07	PPR repeat
PPR_2	PF13041	215 - 262	3.6e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005587)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14190
fragaria_vesca	FvH4_4g12861 FvH4_4g12861
malus_domestica	MD04G1021700.v1.1
prunus_persica	Prupe.1G171300_v2.0.a1 Prupe.1G171300_v2.0.a1
pyrus_communis	pycom04g01780 pycom07g00080
rosa_chinensis	RchiOBHm_Chr4g0412521
rosa_laevigata	RLG00000008282 RLG00000008292
rosa_multiflora	Rmu_sc0000950.1_g000014 Rmu_sc0000987.1_g000016 Rmu_sc0005941.1_g000004
rosa_roxburghii	Rroxscaffold_1G00043460 Rroxscaffold_2G00094110 Rroxscaffold_4G00290720 Rroxscaffold_5G00347880 Rroxscaffold_5G00356740
rosa_rugosa	Rorug04G0103000 Rorug04G0103000 Rorug04G0103100 Rorug04G0103200
rosa_samantha	Rh4AG173700 Rh4BG173200 Rh4CG184700 Rh4DG169200
rosa_wichuraiana	Rw4G014570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1107
AccB1I	GGYRCC	1 cut(s)	637
AccB7I	CCANNNNNTGG	2 cut(s)	194, 1261
AccII	CGCG	2 cut(s)	192, 427
AciI	CCGC	4 cut(s)	183, 192, 427, 792
AclWI	GGATC	3 cut(s)	908, 1238, 1382
AcsI	RAATTY	5 cut(s)	384, 437, 893, 1024, 1287
AcuI	CTGAAG	2 cut(s)	374, 1005
AcyI	GRCGYC	1 cut(s)	638
AdeI	CACNNNGTG	1 cut(s)	194
AfaI	GTAC	1 cut(s)	70
AfiI	CCNNNNNNNGG	5 cut(s)	194, 223, 340, 1261, 1410
AgsI	TTSAA	9 cut(s)	442, 509, 558, 671, 786, 940, 1047, 1204, 1460
AjnI	CCWGG	4 cut(s)	371, 1254, 1392, 1484
AluBI	AGCT	4 cut(s)	58, 78, 983, 1196
AluI	AGCT	4 cut(s)	58, 78, 983, 1196
Alw26I	GTCTC	3 cut(s)	221, 925, 1095
AlwI	GGATC	3 cut(s)	908, 1238, 1382
AlwNI	CAGNNNCTG	1 cut(s)	647
AoxI	GGCC	2 cut(s)	478, 533
ApeKI	GCWGC	3 cut(s)	494, 738, 1442
ApoI	RAATTY	5 cut(s)	384, 437, 893, 1024, 1287
AseI	ATTAAT	1 cut(s)	432
Asp700I	GAANNNNTTC	3 cut(s)	387, 1123, 1214
AspLEI	GCGC	2 cut(s)	499, 640
AspS9I	GGNCC	3 cut(s)	324, 375, 478
AsuHPI	GGTGA	4 cut(s)	265, 329, 967, 1393
AvaII	GGWCC	2 cut(s)	324, 375
AxyI	CCTNAGG	1 cut(s)	1464
BaeGI	GKGCMC	1 cut(s)	18
BanI	GGYRCC	1 cut(s)	637
BbsI	GAAGAC	1 cut(s)	849
BbvI	GCAGC	3 cut(s)	481, 725, 1454
BccI	CCATC	6 cut(s)	308, 544, 653, 697, 907, 1503
BciT130I	CCWGG	4 cut(s)	373, 1256, 1394, 1486
BciVI	GTATCC	1 cut(s)	38
BcoDI	GTCTC	3 cut(s)	221, 925, 1095
BfaI	CTAG	3 cut(s)	980, 1067, 1533
BfmI	CTRYAG	1 cut(s)	445
BfoI	RGCGCY	1 cut(s)	641
BfuI	GTATCC	1 cut(s)	38
BglII	AGATCT	1 cut(s)	1367
BisI	GCNGC	4 cut(s)	183, 495, 739, 1443
BlsI	GCNGC	4 cut(s)	184, 496, 740, 1444
Bme1390I	CCNGG	4 cut(s)	373, 1256, 1394, 1486
Bme18I	GGWCC	2 cut(s)	324, 375
BmgT120I	GGNCC	3 cut(s)	324, 375, 478
BmiI	GGNNCC	2 cut(s)	639, 1266
BmrFI	CCNGG	4 cut(s)	373, 1256, 1394, 1486
BmsI	GCATC	5 cut(s)	31, 586, 1288, 1327, 1540
BpiI	GAAGAC	1 cut(s)	849
BpmI	CTGGAG	1 cut(s)	928
BpuEI	CTTGAG	2 cut(s)	899, 1246
BsaHI	GRCGYC	1 cut(s)	638
BsaJI	CCNNGG	6 cut(s)	279, 378, 1160, 1254, 1255, 1392
Bsc4I	CCNNNNNNNGG	5 cut(s)	194, 223, 340, 1261, 1410
Bse1I	ACTGG	1 cut(s)	957
Bse21I	CCTNAGG	1 cut(s)	1464
Bse3DI	GCAATG	2 cut(s)	31, 879
BseBI	CCWGG	4 cut(s)	373, 1256, 1394, 1486
BseDI	CCNNGG	6 cut(s)	279, 378, 1160, 1254, 1255, 1392
BseGI	GGATG	2 cut(s)	967, 1555
BseLI	CCNNNNNNNGG	5 cut(s)	194, 223, 340, 1261, 1410
BseMI	GCAATG	2 cut(s)	31, 879
BseMII	CTCAG	1 cut(s)	1455
BseNI	ACTGG	1 cut(s)	957
BseRI	GAGGAG	1 cut(s)	1441
BseSI	GKGCMC	1 cut(s)	18
BseXI	GCAGC	3 cut(s)	481, 725, 1454
Bsh1236I	CGCG	2 cut(s)	192, 427
BshFI	GGCC	2 cut(s)	480, 535
BshNI	GGYRCC	1 cut(s)	637
BslFI	GGGAC	2 cut(s)	1342, 1431
BslI	CCNNNNNNNGG	5 cut(s)	194, 223, 340, 1261, 1410
BsmAI	GTCTC	3 cut(s)	221, 925, 1095
BsmFI	GGGAC	2 cut(s)	1342, 1431
BsmI	GAATGC	2 cut(s)	1171, 1445
BsnI	GGCC	2 cut(s)	480, 535
Bsp1286I	GDGCHC	1 cut(s)	18
Bsp143I	GATC	7 cut(s)	414, 526, 900, 1063, 1230, 1367, 1387
BspACI	CCGC	4 cut(s)	183, 192, 427, 792
BspANI	GGCC	2 cut(s)	480, 535
BspCNI	CTCAG	1 cut(s)	1456
BspFNI	CGCG	2 cut(s)	192, 427
BspHI	TCATGA	1 cut(s)	523
BspLI	GGNNCC	2 cut(s)	639, 1266
BspPI	GGATC	3 cut(s)	908, 1238, 1382
BspT107I	GGYRCC	1 cut(s)	637
BsrDI	GCAATG	2 cut(s)	31, 879
BsrI	ACTGG	1 cut(s)	957
BssECI	CCNNGG	6 cut(s)	279, 378, 1160, 1254, 1255, 1392
BssMI	GATC	7 cut(s)	414, 526, 900, 1063, 1230, 1367, 1387
BssNI	GRCGYC	1 cut(s)	638
BssT1I	CCWWGG	1 cut(s)	378
Bst2UI	CCWGG	4 cut(s)	373, 1256, 1394, 1486
Bst4CI	ACNGT	6 cut(s)	68, 287, 936, 1174, 1282, 1436
Bst6I	CTCTTC	5 cut(s)	89, 468, 483, 512, 1108
BstACI	GRCGYC	1 cut(s)	638
BstAPI	GCANNNNNTGC	1 cut(s)	1175
BstC8I	GCNNGC	2 cut(s)	306, 1358
BstDEI	CTNAG	5 cut(s)	530, 837, 1106, 1427, 1464
BstDSI	CCRYGG	1 cut(s)	1160
BstEII	GGTNACC	1 cut(s)	271
BstF5I	GGATG	2 cut(s)	967, 1555
BstFNI	CGCG	2 cut(s)	192, 427
BstH2I	RGCGCY	1 cut(s)	641
BstHHI	GCGC	2 cut(s)	499, 640
BstKTI	GATC	7 cut(s)	417, 529, 903, 1066, 1233, 1370, 1390
BstMAI	GTCTC	3 cut(s)	221, 925, 1095
BstMBI	GATC	7 cut(s)	414, 526, 900, 1063, 1230, 1367, 1387
BstMWI	GCNNNNNNNGC	1 cut(s)	1175
BstNI	CCWGG	4 cut(s)	373, 1256, 1394, 1486
BstPI	GGTNACC	1 cut(s)	271
BstSCI	CCNGG	4 cut(s)	371, 1254, 1392, 1484
BstSFI	CTRYAG	1 cut(s)	445
BstSLI	GKGCMC	1 cut(s)	18
BstUI	CGCG	2 cut(s)	192, 427
BstV1I	GCAGC	3 cut(s)	481, 725, 1454
BstV2I	GAAGAC	1 cut(s)	849
BstX2I	RGATCY	3 cut(s)	900, 1230, 1367
BstXI	CCANNNNNNTGG	1 cut(s)	952
BstYI	RGATCY	3 cut(s)	900, 1230, 1367
Bsu36I	CCTNAGG	1 cut(s)	1464
BsuI	GTATCC	1 cut(s)	38
BsuRI	GGCC	2 cut(s)	480, 535
BtgI	CCRYGG	1 cut(s)	1160
BtsCI	GGATG	2 cut(s)	967, 1555
BtsIMutI	CAGTG	1 cut(s)	950
Cac8I	GCNNGC	2 cut(s)	306, 1358
CaiI	CAGNNNCTG	1 cut(s)	647
CciI	TCATGA	1 cut(s)	523
CfoI	GCGC	2 cut(s)	499, 640
Cfr13I	GGNCC	3 cut(s)	324, 375, 478
CseI	GACGC	1 cut(s)	1070
Csp6I	GTAC	1 cut(s)	69
CspCI	CAANNNNNGTGG	2 cut(s)	202, 237
CviAII	CATG	9 cut(s)	236, 484, 501, 524, 566, 829, 1094, 1189, 1341
CviQI	GTAC	1 cut(s)	69
DdeI	CTNAG	5 cut(s)	530, 837, 1106, 1427, 1464
DinI	GGCGCC	1 cut(s)	639
DpnI	GATC	7 cut(s)	416, 528, 902, 1065, 1232, 1369, 1389
DpnII	GATC	7 cut(s)	414, 526, 900, 1063, 1230, 1367, 1387
DraIII	CACNNNGTG	1 cut(s)	194
DrdI	GACNNNNNNGTC	1 cut(s)	1107
DseDI	GACNNNNNNGTC	1 cut(s)	1107
Eam1104I	CTCTTC	5 cut(s)	89, 468, 483, 512, 1108
EarI	CTCTTC	5 cut(s)	89, 468, 483, 512, 1108
Eco130I	CCWWGG	1 cut(s)	378
Eco47I	GGWCC	2 cut(s)	324, 375
Eco57I	CTGAAG	2 cut(s)	374, 1005
Eco81I	CCTNAGG	1 cut(s)	1464
Eco91I	GGTNACC	1 cut(s)	271
EcoO109I	RGGNCCY	1 cut(s)	478
EcoO65I	GGTNACC	1 cut(s)	271
EcoRI	GAATTC	2 cut(s)	437, 1287
EcoRII	CCWGG	4 cut(s)	371, 1254, 1392, 1484
EcoT14I	CCWWGG	1 cut(s)	378
EcoT22I	ATGCAT	1 cut(s)	1342
EgeI	GGCGCC	1 cut(s)	639
EheI	GGCGCC	1 cut(s)	639
ErhI	CCWWGG	1 cut(s)	378
FaeI	CATG	9 cut(s)	239, 487, 504, 527, 569, 832, 1097, 1192, 1344
FalI	AAGNNNNNCTT	6 cut(s)	246, 278, 950, 982, 1340, 1372
FaqI	GGGAC	2 cut(s)	1342, 1431
FatI	CATG	9 cut(s)	235, 483, 500, 523, 565, 828, 1093, 1188, 1340
FauI	CCCGC	1 cut(s)	785
Fnu4HI	GCNGC	4 cut(s)	183, 495, 739, 1443
FokI	GGATG	2 cut(s)	974, 1562
Fsp4HI	GCNGC	4 cut(s)	183, 495, 739, 1443
FspBI	CTAG	3 cut(s)	980, 1067, 1533
GlaI	GCGC	2 cut(s)	498, 639
GluI	GCNGC	4 cut(s)	183, 495, 739, 1443
GsuI	CTGGAG	1 cut(s)	928
HaeII	RGCGCY	1 cut(s)	641
HaeIII	GGCC	2 cut(s)	480, 535
HgaI	GACGC	1 cut(s)	1070
HhaI	GCGC	2 cut(s)	499, 640
Hin1I	GRCGYC	1 cut(s)	638
Hin1II	CATG	9 cut(s)	239, 487, 504, 527, 569, 832, 1097, 1192, 1344
Hin6I	GCGC	2 cut(s)	497, 638
HinP1I	GCGC	2 cut(s)	497, 638
HinfI	GANTC	4 cut(s)	520, 562, 1124, 1529
HphI	GGTGA	4 cut(s)	265, 329, 967, 1393
Hpy166II	GTNNAC	1 cut(s)	550
Hpy188I	TCNGA	2 cut(s)	1059, 1472
Hpy188III	TCNNGA	8 cut(s)	418, 509, 524, 776, 945, 997, 1014, 1047
Hpy8I	GTNNAC	1 cut(s)	550
HpyAV	CCTTC	6 cut(s)	147, 262, 952, 1345, 1408, 1540
HpyCH4III	ACNGT	6 cut(s)	68, 287, 936, 1174, 1282, 1436
HpyCH4V	TGCA	8 cut(s)	22, 308, 853, 872, 1169, 1178, 1301, 1340
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1175
HpyF3I	CTNAG	5 cut(s)	530, 837, 1106, 1427, 1464
Hsp92I	GRCGYC	1 cut(s)	638
Hsp92II	CATG	9 cut(s)	239, 487, 504, 527, 569, 832, 1097, 1192, 1344
HspAI	GCGC	2 cut(s)	497, 638
KasI	GGCGCC	1 cut(s)	637
Kzo9I	GATC	7 cut(s)	414, 526, 900, 1063, 1230, 1367, 1387
LmnI	GCTCC	2 cut(s)	1264, 1365
Lsp1109I	GCAGC	3 cut(s)	481, 725, 1454
LweI	GCATC	5 cut(s)	31, 586, 1288, 1327, 1540
MaeI	CTAG	3 cut(s)	980, 1067, 1533
MaeIII	GTNAC	2 cut(s)	271, 795
MalI	GATC	7 cut(s)	416, 528, 902, 1065, 1232, 1369, 1389
MboI	GATC	7 cut(s)	414, 526, 900, 1063, 1230, 1367, 1387
MfeI	CAATTG	1 cut(s)	299
MflI	RGATCY	3 cut(s)	900, 1230, 1367
MhlI	GDGCHC	1 cut(s)	18
Mly113I	GGCGCC	1 cut(s)	638
MlyI	GAGTC	1 cut(s)	529
MmeI	TCCRAC	1 cut(s)	1264
Mph1103I	ATGCAT	1 cut(s)	1342
MroXI	GAANNNNTTC	3 cut(s)	387, 1123, 1214
MseI	TTAA	5 cut(s)	432, 467, 612, 968, 1517
MslI	CAYNNNNRTG	1 cut(s)	1187
MspR9I	CCNGG	4 cut(s)	373, 1256, 1394, 1486
MunI	CAATTG	1 cut(s)	299
Mva1269I	GAATGC	2 cut(s)	1171, 1445
MvaI	CCWGG	4 cut(s)	373, 1256, 1394, 1486
MvnI	CGCG	2 cut(s)	192, 427
MwoI	GCNNNNNNNGC	1 cut(s)	1175
NarI	GGCGCC	1 cut(s)	638
NdeII	GATC	7 cut(s)	414, 526, 900, 1063, 1230, 1367, 1387
NlaIII	CATG	9 cut(s)	239, 487, 504, 527, 569, 832, 1097, 1192, 1344
NlaIV	GGNNCC	2 cut(s)	639, 1266
NmuCI	GTSAC	1 cut(s)	271
NsiI	ATGCAT	1 cut(s)	1342
PagI	TCATGA	1 cut(s)	523
PasI	CCCWGGG	1 cut(s)	1255
PctI	GAATGC	2 cut(s)	1171, 1445
PdmI	GAANNNNTTC	3 cut(s)	387, 1123, 1214
PfeI	GAWTC	3 cut(s)	562, 1124, 1529
PflMI	CCANNNNNTGG	2 cut(s)	194, 1261
PkrI	GCNGC	4 cut(s)	184, 496, 740, 1444
PleI	GAGTC	1 cut(s)	528
PluTI	GGCGCC	1 cut(s)	641
PpsI	GAGTC	1 cut(s)	528
PshBI	ATTAAT	1 cut(s)	432
Psp6I	CCWGG	4 cut(s)	371, 1254, 1392, 1484
PspEI	GGTNACC	1 cut(s)	271
PspGI	CCWGG	4 cut(s)	371, 1254, 1392, 1484
PspN4I	GGNNCC	2 cut(s)	639, 1266
PspPI	GGNCC	3 cut(s)	324, 375, 478
PstNI	CAGNNNCTG	1 cut(s)	647
PsuI	RGATCY	3 cut(s)	900, 1230, 1367
RsaI	GTAC	1 cut(s)	70
RsaNI	GTAC	1 cut(s)	69
RseI	CAYNNNNRTG	1 cut(s)	1187
SaqAI	TTAA	5 cut(s)	432, 467, 612, 968, 1517
SatI	GCNGC	4 cut(s)	183, 495, 739, 1443
Sau3AI	GATC	7 cut(s)	414, 526, 900, 1063, 1230, 1367, 1387
Sau96I	GGNCC	3 cut(s)	324, 375, 478
SchI	GAGTC	1 cut(s)	529
ScrFI	CCNGG	4 cut(s)	373, 1256, 1394, 1486
SduI	GDGCHC	1 cut(s)	18
SfaNI	GCATC	5 cut(s)	31, 586, 1288, 1327, 1540
SfcI	CTRYAG	1 cut(s)	445
SfoI	GGCGCC	1 cut(s)	639
SinI	GGWCC	2 cut(s)	324, 375
SmiMI	CAYNNNNRTG	1 cut(s)	1187
SmlI	CTYRAG	2 cut(s)	878, 1225
SmoI	CTYRAG	2 cut(s)	878, 1225
SsiI	CCGC	4 cut(s)	183, 192, 427, 792
SspDI	GGCGCC	1 cut(s)	637
SspMI	CTAG	3 cut(s)	980, 1067, 1533
StyD4I	CCNGG	4 cut(s)	371, 1254, 1392, 1484
StyI	CCWWGG	1 cut(s)	378
TaaI	ACNGT	6 cut(s)	68, 287, 936, 1174, 1282, 1436
TaqI	TCGA	5 cut(s)	417, 775, 996, 1013, 1111
TauI	GCSGC	1 cut(s)	185
TfiI	GAWTC	3 cut(s)	562, 1124, 1529
Tru1I	TTAA	5 cut(s)	432, 467, 612, 968, 1517
Tru9I	TTAA	5 cut(s)	432, 467, 612, 968, 1517
TscAI	CASTG	1 cut(s)	957
TseFI	GTSAC	1 cut(s)	271
TseI	GCWGC	3 cut(s)	494, 738, 1442
Tsp45I	GTSAC	1 cut(s)	271
TspGWI	ACGGA	1 cut(s)	67
TspRI	CASTG	1 cut(s)	957
Van91I	CCANNNNNTGG	2 cut(s)	194, 1261
VpaK11BI	GGWCC	2 cut(s)	324, 375
VspI	ATTAAT	1 cut(s)	432
XapI	RAATTY	5 cut(s)	384, 437, 893, 1024, 1287
XcmI	CCANNNNNNNNNTGG	1 cut(s)	220
XmnI	GAANNNNTTC	3 cut(s)	387, 1123, 1214
XspI	CTAG	3 cut(s)	980, 1067, 1533
Zsp2I	ATGCAT	1 cut(s)	1342

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.