Rh4CG184700

endonuclease activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0005587
Physical Location & Seq
Reverse (-)
39788877 .. 39800002
11126 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG184700.1

Sequence Viewer

Length: 2595 bp
ATGGAAGGATCAGTTGAAGAAAATATTCTGGTGAAGTCAGAATTGACCCCCGAGTCTTCTGCCAATCTAACTGGTTCAAAAGCTATTGTTGAAGATGCAGCCAATGGTTCTAGGATGGAGCTGGTTGAAACCAGTGGCAGAGAGTTAGATGGCGGTTCGAATTCTAGCAAAGTTGCAGGAAAAATTCTATCAGATGCTCAGCAAGATGTGTTAGAAAATGAGATTGCTTGCAATGACAAAATCCTGAAAGAAGTTGATGCCGGTGTTGCTGCTGGGTCAGATCATGGTCAGAATGTTGAATCGTTCCAGAAGAGTTCGGAGGACCATGGGAAGAAAGAACCAGGGTTTTCTGCTTTAGATACCGAATCTTCTGTTCAAAGTTTCATTGGCTCTGAAGATAGTGGCTCCCAAGAGGTCCATGCGGTTGCTTCTGGGATTGCTTCTCAATCTTTGTTAGAGGAAGGCGATAATAACCTTGTCAGACAACAGCCAAGCTCAATTGCAATTGATGTGGACTCAAATAGCCAAACTGACAGTCTGGAAGCCAACTGGGGATCTTTCTCAGTTCTTTCCATGCAATCTGATGCTGAAACTGTGCCACATACGCATTCCCAATCTTCATTAGGTGAAAACTCGGGCAAATCTGATATGTTTGAGGCACCATCTTTCATGACATTGGTTGAACCCCGAGGTGGGGATGATCAAAAAGCTACTGGTTCTGAAATCCTGACTGCAGTACAGAACCCAGAACAGCCAAAACCTGCATCTTTGCAAACTGGGTGGTTTCCTTCTATGACTCATGTTGTGAATGAGTCACCGGGGAGAAAGAAGAACGAAGAGATCATTGCCAAGGTGACAAACAGGAGCACTGGGAAGCAACACACTCCTTTGAAAAACCTTTTGGGGGAGGCCTCAAGTGAAAGCAACGGAAAGCCACTGAACCAAAAAGAAAGTCTTGCTCTTGCTCCTCAGAAAGATGATAAAGCTGCAATGGTCAGTGGTCCTGTAACAACAACAGTGAGCTCGATTCTGAATCCTGAATCGCCGACTGGTCAGGCTGCTAAGAAAGAGACTGCAAAAGAATGGAACTCGCCGGCCAGATATCCTTCAGACACTAAGAGTGAGAAGAGGAAGAGCTTTAGGGTTCTACTTAGGTTGAAGTTTGTGCTGGTGAAGTTGCTAGATATTGTCAATCCGTTCTTCTCACCACCACTACCACCGCATAACACCAGTTCCCCAAAGCACGCCACCCTCCATTCCCATGAATACCACAAGCTCAAAGCCTTACTGGAGATTCTCATGGAGAAGGAGTGTTGCCCTTTGCAAGTGCTTAGAGGTGATGGTGATTGGACCAGAGACCAATTCTGGGCTGTCATCAGATTCCTCATACATGCTTCCAGGCCCAAGGAAATCTTGCAGTTATTTGATATATGGAGGAACATTGAGAAATCGCGGATTAATGAATTCAACTACAGCAAGATAATAGGATTGTTAGTTGAGGAGGACCTGATTGAAGAGGCGGTGCTGTGCTTTCAGGATATGAAGACTCATGGTCTTAGGCTGTCTGTGGAAGTATATAATTCAATTATTCATGGTCTTTCGAGAAATGGAAACTTTGATGATGCTGAACTCTTCCTTAACGAGATGAAAGAAACGAATTTGGCCCCAGACACTGATACTTATGATGGGCTCATTGAAGCTTATGGAAAATATAGAATGTATGATGAGATGGGTATGTGTCTGAAGAAAATGAGATTAAATGGCTGTTCACCAGACCAGATTACCTATAATTTGCTTATTCGAGAGTTTGCACGTGGAGGGTTACTGAAAAGGATGGAAAGAGTATATCAATCCATGGTTTCAAAAAGAATGGATTTGCAGGCTCCTACTTTGATTGCAATGCTGGAAGTTTATGCAAAATTTGGGATCTTGGAGAAGATGGAAGTGTTTTATAGAAGAGTTTTGAACTCGAGAGCAATTTTAAAGGAGGATTTGATTAAGAAAGTTGCAGAAGTTTATATTGAGAACTATATGTTTTCCAGATTAGAGAGCTTGGGAGTTGATCTTTCTCCGAGATTTGGTCAGACTGATCTCGTTTGGTGTGTGCGTCTCCTTTCTCATGCTGGTATTTTGAGTCGAAGAGGTATGGATTCCGTCATTCTAGAGATGGAAGAAAAAGGTGTCCCATGGAATGCAACGGTGGGAAACATAATAATGCTAGCTTATTTGAAGATGAAAGATTTCACCCGCCTGAGAATCATGTTCTCCCAATCACTAACCCATGGTGTGGAGCCCGATATGATCACTGTTGGAATTCTATTTGATGCAATTAGGATTGGCTATGATGGGTCTGCGACTTTAGATGCATGGAGGAAGCAGGGTTTTCTTTACAAAGCAGTTGAAATGAACACCGATCCTCTTGTTATTACTACATTTGGGAAAGGGCATTTCCTCAGGAACTGTGAAGCAGCATACTCCTCTCTTGAACCTGAAGTTAGAGAAAAGAAAACATGGACTTACCAAGATCTCATTGATTCAGTGTTCAAAGACAATCAGTGTAACCTCAGTAAGAGGGACTTAATGAAGTCAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

864

Amino Acids

96.37

Weight (kDa)

5.46

Isoelectric Point (pI)

47.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 472 - 625 1e-07 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 511 - 570 6.1e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 518 - 550 5.7e-07 PPR repeat
PPR_2 PF13041 523 - 569 2.6e-11 PPR repeat family
PPR PF01535 525 - 551 2.7e-06 PPR repeat
PPR_2 PF13041 560 - 605 1.3e-07 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 52
Acc36I ACCTGC 1 cut(s) 769
AccB1I GGYRCC 1 cut(s) 658
AccB7I CCANNNNNTGG 1 cut(s) 2287
AccII CGCG 1 cut(s) 1453
AciI CCGC 6 cut(s) 153, 422, 1220, 1453, 1520, 2248
AclWI GGATC 4 cut(s) 16, 562, 1934, 2408
AcoI YGGCCR 1 cut(s) 1095
AcsI RAATTY 6 cut(s) 160, 183, 1463, 1657, 1919, 2313
AcuI CTGAAG 4 cut(s) 414, 1092, 1763, 2511
AcvI CACGTG 1 cut(s) 1814
AfaI GTAC 1 cut(s) 738
AfiI CCNNNNNNNGG 7 cut(s) 692, 693, 694, 904, 1366, 2078, 2287
AhdI GACNNNNNGTC 1 cut(s) 1551
AjnI CCWGG 2 cut(s) 340, 1397
AjuI GAANNNNNNNTTGG 2 cut(s) 884, 916
Alw21I GWGCWC 2 cut(s) 869, 1025
Alw26I GTCTC 3 cut(s) 1064, 1350, 2114
AlwI GGATC 4 cut(s) 16, 562, 1934, 2408
AlwNI CAGNNNCTG 2 cut(s) 1673, 2460
Ama87I CYCGRG 4 cut(s) 50, 634, 687, 1969
AoxI GGCC 4 cut(s) 909, 1095, 1400, 1662
ApeKI GCWGC 5 cut(s) 98, 269, 986, 1058, 2468
ApoI RAATTY 6 cut(s) 160, 183, 1463, 1657, 1919, 2313
ArsI GACNNNNNNTTYG 4 cut(s) 520, 552, 937, 969
AseI ATTAAT 1 cut(s) 1458
Asp700I GAANNNNTTC 2 cut(s) 24, 2240
AspS9I GGNCC 7 cut(s) 322, 415, 1001, 1350, 1401, 1504, 1663
AsuC2I CCSGG 1 cut(s) 819
AsuII TTCGAA 1 cut(s) 158
AsuNHI GCTAGC 1 cut(s) 2218
AvaI CYCGRG 4 cut(s) 50, 634, 687, 1969
AvaII GGWCC 5 cut(s) 322, 415, 1001, 1350, 1504
AxyI CCTNAGG 1 cut(s) 2453
BanI GGYRCC 1 cut(s) 658
BanII GRGCYC 3 cut(s) 1025, 1692, 2295
BbrPI CACGTG 1 cut(s) 1814
BbsI GAAGAC 2 cut(s) 48, 1550
Bbv12I GWGCWC 2 cut(s) 869, 1025
BbvI GCAGC 5 cut(s) 110, 256, 973, 1045, 2480
BcgI CGANNNNNNTGC 2 cut(s) 41, 75
BciT130I CCWGG 2 cut(s) 342, 1399
BclI TGATCA 2 cut(s) 700, 2301
BcnI CCSGG 1 cut(s) 819
BcoDI GTCTC 3 cut(s) 1064, 1350, 2114
BfaI CTAG 5 cut(s) 111, 165, 1181, 2162, 2219
BfmI CTRYAG 2 cut(s) 732, 1471
BfuAI ACCTGC 1 cut(s) 769
BglII AGATCT 1 cut(s) 2524
BisI GCNGC 5 cut(s) 99, 270, 987, 1059, 2469
BlpI GCTNAGC 1 cut(s) 198
BlsI GCNGC 5 cut(s) 100, 271, 988, 1060, 2470
Bme1390I CCNGG 3 cut(s) 342, 819, 1399
Bme18I GGWCC 5 cut(s) 322, 415, 1001, 1350, 1504
BmeRI GACNNNNNGTC 1 cut(s) 1551
BmeT110I CYCGRG 4 cut(s) 50, 634, 687, 1969
BmgT120I GGNCC 7 cut(s) 322, 415, 1001, 1350, 1401, 1504, 1663
BmiI GGNNCC 5 cut(s) 406, 660, 1665, 1884, 2292
BmrFI CCNGG 3 cut(s) 342, 819, 1399
BmrI ACTGGG 3 cut(s) 559, 786, 879
BmsI GCATC 8 cut(s) 85, 184, 247, 574, 773, 1612, 2314, 2353
BmtI GCTAGC 1 cut(s) 2222
BmuI ACTGGG 3 cut(s) 559, 786, 879
BpiI GAAGAC 2 cut(s) 48, 1550
BpmI CTGGAG 1 cut(s) 1310
Bpu1102I GCTNAGC 1 cut(s) 198
Bpu14I TTCGAA 1 cut(s) 158
BpuEI CTTGAG 1 cut(s) 898
BpuMI CCSGG 1 cut(s) 819
BsaAI YACGTR 1 cut(s) 1814
BsaI GGTCTC 1 cut(s) 1350
BsaJI CCNNGG 9 cut(s) 325, 341, 688, 818, 849, 1404, 1854, 2186, 2281
BsaXI ACNNNNNCTCC 2 cut(s) 1295, 1325
Bsc4I CCNNNNNNNGG 7 cut(s) 692, 693, 694, 904, 1366, 2078, 2287
Bse118I RCCGGY 2 cut(s) 260, 1093
Bse1I ACTGG 9 cut(s) 76, 132, 554, 718, 781, 874, 1054, 1230, 1293
Bse21I CCTNAGG 1 cut(s) 2453
Bse3DI GCAATG 4 cut(s) 238, 843, 996, 1905
BseBI CCWGG 2 cut(s) 342, 1399
BseDI CCNNGG 9 cut(s) 325, 341, 688, 818, 849, 1404, 1854, 2186, 2281
BseGI GGATG 3 cut(s) 120, 703, 1839
BseLI CCNNNNNNNGG 7 cut(s) 692, 693, 694, 904, 1366, 2078, 2287
BseMI GCAATG 4 cut(s) 238, 843, 996, 1905
BseMII CTCAG 6 cut(s) 212, 576, 983, 2243, 2467, 2578
BseNI ACTGG 9 cut(s) 76, 132, 554, 718, 781, 874, 1054, 1230, 1293
BseRI GAGGAG 3 cut(s) 957, 1514, 2467
BseXI GCAGC 5 cut(s) 110, 256, 973, 1045, 2480
BseYI CCCAGC 1 cut(s) 272
Bsh1236I CGCG 1 cut(s) 1453
BshFI GGCC 4 cut(s) 911, 1097, 1402, 1664
BshNI GGYRCC 1 cut(s) 658
BsiHKAI GWGCWC 2 cut(s) 869, 1025
BsiHKCI CYCGRG 4 cut(s) 50, 634, 687, 1969
BsiSI CCGG 3 cut(s) 261, 818, 1094
BslFI GGGAC 2 cut(s) 2168, 2588
BslI CCNNNNNNNGG 7 cut(s) 692, 693, 694, 904, 1366, 2078, 2287
BsmAI GTCTC 3 cut(s) 1064, 1350, 2114
BsmBI CGTCTC 1 cut(s) 2114
BsmFI GGGAC 2 cut(s) 2168, 2588
BsmI GAATGC 2 cut(s) 607, 2197
BsnI GGCC 4 cut(s) 911, 1097, 1402, 1664
Bso31I GGTCTC 1 cut(s) 1350
BsoBI CYCGRG 4 cut(s) 50, 634, 687, 1969
Bsp119I TTCGAA 1 cut(s) 158
Bsp1286I GDGCHC 4 cut(s) 869, 1025, 1692, 2295
Bsp1720I GCTNAGC 1 cut(s) 198
Bsp19I CCATGG 4 cut(s) 325, 1854, 2186, 2281
BspACI CCGC 6 cut(s) 153, 422, 1220, 1453, 1520, 2248
BspANI GGCC 4 cut(s) 911, 1097, 1402, 1664
BspCNI CTCAG 6 cut(s) 211, 575, 982, 2244, 2466, 2577
BspFNI CGCG 1 cut(s) 1453
BspHI TCATGA 1 cut(s) 669
BspLI GGNNCC 5 cut(s) 406, 660, 1665, 1884, 2292
BspMAI CTGCAG 1 cut(s) 736
BspMI ACCTGC 1 cut(s) 769
BspOI GCTAGC 1 cut(s) 2222
BspPI GGATC 4 cut(s) 16, 562, 1934, 2408
BspQI GCTCTTC 1 cut(s) 1127
BspT104I TTCGAA 1 cut(s) 158
BspT107I GGYRCC 1 cut(s) 658
BspTNI GGTCTC 1 cut(s) 1350
BsrDI GCAATG 4 cut(s) 238, 843, 996, 1905
BsrFI RCCGGY 2 cut(s) 260, 1093
BsrI ACTGG 9 cut(s) 76, 132, 554, 718, 781, 874, 1054, 1230, 1293
BssAI RCCGGY 2 cut(s) 260, 1093
BssECI CCNNGG 9 cut(s) 325, 341, 688, 818, 849, 1404, 1854, 2186, 2281
BssT1I CCWWGG 6 cut(s) 325, 849, 1404, 1854, 2186, 2281
Bst2UI CCWGG 2 cut(s) 342, 1399
Bst4CI ACNGT 6 cut(s) 536, 595, 1018, 2200, 2308, 2462
Bst6I CTCTTC 8 cut(s) 305, 831, 1121, 1127, 1509, 1637, 1951, 2134
BstBAI YACGTR 1 cut(s) 1814
BstBI TTCGAA 1 cut(s) 158
BstC8I GCNNGC 5 cut(s) 229, 1095, 1245, 1881, 2220
BstDSI CCRYGG 4 cut(s) 325, 1854, 2186, 2281
BstF5I GGATG 3 cut(s) 120, 703, 1839
BstFNI CGCG 1 cut(s) 1453
BstMAI GTCTC 3 cut(s) 1064, 1350, 2114
BstMWI GCNNNNNNNGC 2 cut(s) 266, 604
BstNI CCWGG 2 cut(s) 342, 1399
BstNSI RCATGY 1 cut(s) 1394
BstSCI CCNGG 3 cut(s) 340, 817, 1397
BstSFI CTRYAG 2 cut(s) 732, 1471
BstUI CGCG 1 cut(s) 1453
BstV1I GCAGC 5 cut(s) 110, 256, 973, 1045, 2480
BstV2I GAAGAC 2 cut(s) 48, 1550
BstX2I RGATCY 3 cut(s) 554, 1926, 2524
BstYI RGATCY 3 cut(s) 554, 1926, 2524
Bsu36I CCTNAGG 1 cut(s) 2453
BsuRI GGCC 4 cut(s) 911, 1097, 1402, 1664
BtgI CCRYGG 4 cut(s) 325, 1854, 2186, 2281
BtsCI GGATG 3 cut(s) 120, 703, 1839
BtsIMutI CAGTG 9 cut(s) 139, 867, 935, 1003, 1023, 1671, 2304, 2544, 2561
BveI ACCTGC 1 cut(s) 769
Cac8I GCNNGC 5 cut(s) 229, 1095, 1245, 1881, 2220
CaiI CAGNNNCTG 2 cut(s) 1673, 2460
CciI TCATGA 1 cut(s) 669
Cfr10I RCCGGY 2 cut(s) 260, 1093
Cfr13I GGNCC 7 cut(s) 322, 415, 1001, 1350, 1401, 1504, 1663
CseI GACGC 1 cut(s) 2096
Csp6I GTAC 1 cut(s) 737
CspCI CAANNNNNGTGG 4 cut(s) 492, 527, 761, 796
CviQI GTAC 1 cut(s) 737
DraI TTTAAA 1 cut(s) 1983
DrdI GACNNNNNNGTC 1 cut(s) 52
DriI GACNNNNNGTC 1 cut(s) 1551
DseDI GACNNNNNNGTC 1 cut(s) 52
EaeI YGGCCR 1 cut(s) 1095
Eam1104I CTCTTC 8 cut(s) 305, 831, 1121, 1127, 1509, 1637, 1951, 2134
Eam1105I GACNNNNNGTC 1 cut(s) 1551
EarI CTCTTC 8 cut(s) 305, 831, 1121, 1127, 1509, 1637, 1951, 2134
Ecl136II GAGCTC 1 cut(s) 1023
Eco130I CCWWGG 6 cut(s) 325, 849, 1404, 1854, 2186, 2281
Eco147I AGGCCT 1 cut(s) 911
Eco24I GRGCYC 3 cut(s) 1025, 1692, 2295
Eco31I GGTCTC 1 cut(s) 1350
Eco32I GATATC 1 cut(s) 1103
Eco47I GGWCC 5 cut(s) 322, 415, 1001, 1350, 1504
Eco53kI GAGCTC 1 cut(s) 1023
Eco57I CTGAAG 4 cut(s) 414, 1092, 1763, 2511
Eco72I CACGTG 1 cut(s) 1814
Eco81I CCTNAGG 1 cut(s) 2453
Eco88I CYCGRG 4 cut(s) 50, 634, 687, 1969
EcoICRI GAGCTC 1 cut(s) 1023
EcoO109I RGGNCCY 1 cut(s) 1504
EcoRI GAATTC 3 cut(s) 160, 1463, 2313
EcoRII CCWGG 2 cut(s) 340, 1397
EcoRV GATATC 1 cut(s) 1103
EcoT14I CCWWGG 6 cut(s) 325, 849, 1404, 1854, 2186, 2281
EcoT22I ATGCAT 1 cut(s) 2368
EcoT38I GRGCYC 3 cut(s) 1025, 1692, 2295
ErhI CCWWGG 6 cut(s) 325, 849, 1404, 1854, 2186, 2281
Esp3I CGTCTC 1 cut(s) 2114
FalI AAGNNNNNCTT 6 cut(s) 939, 971, 1397, 1429, 2561, 2593
FaqI GGGAC 2 cut(s) 2168, 2588
FauI CCCGC 1 cut(s) 2255
FbaI TGATCA 2 cut(s) 700, 2301
Fnu4HI GCNGC 5 cut(s) 99, 270, 987, 1059, 2469
FokI GGATG 3 cut(s) 127, 710, 1846
FriOI GRGCYC 3 cut(s) 1025, 1692, 2295
Fsp4HI GCNGC 5 cut(s) 99, 270, 987, 1059, 2469
FspBI CTAG 5 cut(s) 111, 165, 1181, 2162, 2219
GluI GCNGC 5 cut(s) 99, 270, 987, 1059, 2469
GsaI CCCAGC 1 cut(s) 276
GsuI CTGGAG 1 cut(s) 1310
HaeIII GGCC 4 cut(s) 911, 1097, 1402, 1664
HapII CCGG 3 cut(s) 261, 818, 1094
HgaI GACGC 1 cut(s) 2096
HindIII AAGCTT 1 cut(s) 1698
HpaII CCGG 3 cut(s) 261, 818, 1094
Hpy166II GTNNAC 2 cut(s) 514, 1769
Hpy8I GTNNAC 2 cut(s) 514, 1769
HpyAV CCTTC 4 cut(s) 455, 798, 1116, 1300
HpyCH4III ACNGT 6 cut(s) 536, 595, 1018, 2200, 2308, 2462
HpyCH4IV ACGT 1 cut(s) 1813
HpyF10VI GCNNNNNNNGC 2 cut(s) 266, 604
HpySE526I ACGT 1 cut(s) 1813
KroI GCCGGC 1 cut(s) 1093
KroNI GCCGGC 1 cut(s) 1095
Ksp22I TGATCA 2 cut(s) 700, 2301
LguI GCTCTTC 1 cut(s) 1127
LmnI GCTCC 6 cut(s) 118, 410, 864, 970, 1888, 2290
Lsp1109I GCAGC 5 cut(s) 110, 256, 973, 1045, 2480
LweI GCATC 8 cut(s) 85, 184, 247, 574, 773, 1612, 2314, 2353
MaeI CTAG 5 cut(s) 111, 165, 1181, 2162, 2219
MaeII ACGT 1 cut(s) 1813
MaeIII GTNAC 5 cut(s) 813, 853, 1006, 1821, 2558
MfeI CAATTG 2 cut(s) 498, 504
MflI RGATCY 3 cut(s) 554, 1926, 2524
MhlI GDGCHC 4 cut(s) 869, 1025, 1692, 2295
MlyI GAGTC 6 cut(s) 62, 509, 790, 821, 1540, 2143
MmeI TCCRAC 1 cut(s) 2290
Mph1103I ATGCAT 1 cut(s) 2368
MroNI GCCGGC 1 cut(s) 1093
MroXI GAANNNNTTC 2 cut(s) 24, 2240
MseI TTAA 6 cut(s) 1458, 1638, 1757, 1982, 1998, 2579
MslI CAYNNNNRTG 2 cut(s) 1260, 2213
MspI CCGG 3 cut(s) 261, 818, 1094
MspR9I CCNGG 3 cut(s) 342, 819, 1399
MunI CAATTG 2 cut(s) 498, 504
Mva1269I GAATGC 2 cut(s) 607, 2197
MvaI CCWGG 2 cut(s) 342, 1399
MvnI CGCG 1 cut(s) 1453
MwoI GCNNNNNNNGC 2 cut(s) 266, 604
NaeI GCCGGC 1 cut(s) 1095
NciI CCSGG 1 cut(s) 819
NcoI CCATGG 4 cut(s) 325, 1854, 2186, 2281
NgoMIV GCCGGC 1 cut(s) 1093
NheI GCTAGC 1 cut(s) 2218
NlaIV GGNNCC 5 cut(s) 406, 660, 1665, 1884, 2292
NmuCI GTSAC 2 cut(s) 813, 853
NsiI ATGCAT 1 cut(s) 2368
NspI RCATGY 1 cut(s) 1394
NspV TTCGAA 1 cut(s) 158
PaeR7I CTCGAG 1 cut(s) 1969
PagI TCATGA 1 cut(s) 669
PceI AGGCCT 1 cut(s) 911
PciSI GCTCTTC 1 cut(s) 1127
PctI GAATGC 2 cut(s) 607, 2197
PdiI GCCGGC 1 cut(s) 1095
PdmI GAANNNNTTC 2 cut(s) 24, 2240
PflMI CCANNNNNTGG 1 cut(s) 2287
PkrI GCNGC 5 cut(s) 100, 271, 988, 1060, 2470
PleI GAGTC 6 cut(s) 61, 509, 790, 820, 1540, 2142
PmaCI CACGTG 1 cut(s) 1814
PmlI CACGTG 1 cut(s) 1814
PpsI GAGTC 6 cut(s) 61, 509, 790, 820, 1540, 2142
Ppu21I YACGTR 1 cut(s) 1814
PpuMI RGGWCCY 1 cut(s) 1504
PshBI ATTAAT 1 cut(s) 1458
Psp124BI GAGCTC 1 cut(s) 1025
Psp5II RGGWCCY 1 cut(s) 1504
Psp6I CCWGG 2 cut(s) 340, 1397
PspCI CACGTG 1 cut(s) 1814
PspFI CCCAGC 1 cut(s) 272
PspGI CCWGG 2 cut(s) 340, 1397
PspN4I GGNNCC 5 cut(s) 406, 660, 1665, 1884, 2292
PspPI GGNCC 7 cut(s) 322, 415, 1001, 1350, 1401, 1504, 1663
PspPPI RGGWCCY 1 cut(s) 1504
PstI CTGCAG 1 cut(s) 736
PstNI CAGNNNCTG 2 cut(s) 1673, 2460
PsuI RGATCY 3 cut(s) 554, 1926, 2524
RsaI GTAC 1 cut(s) 738
RsaNI GTAC 1 cut(s) 737
RseI CAYNNNNRTG 2 cut(s) 1260, 2213
SacI GAGCTC 1 cut(s) 1025
SapI GCTCTTC 1 cut(s) 1127
SaqAI TTAA 6 cut(s) 1458, 1638, 1757, 1982, 1998, 2579
SatI GCNGC 5 cut(s) 99, 270, 987, 1059, 2469
Sau96I GGNCC 7 cut(s) 322, 415, 1001, 1350, 1401, 1504, 1663
SchI GAGTC 6 cut(s) 62, 509, 790, 821, 1540, 2143
ScrFI CCNGG 3 cut(s) 342, 819, 1399
SduI GDGCHC 4 cut(s) 869, 1025, 1692, 2295
SfaNI GCATC 8 cut(s) 85, 184, 247, 574, 773, 1612, 2314, 2353
SfcI CTRYAG 2 cut(s) 732, 1471
Sfr274I CTCGAG 1 cut(s) 1969
SfuI TTCGAA 1 cut(s) 158
SinI GGWCC 5 cut(s) 322, 415, 1001, 1350, 1504
SlaI CTCGAG 1 cut(s) 1969
SmiMI CAYNNNNRTG 2 cut(s) 1260, 2213
SmlI CTYRAG 2 cut(s) 913, 1969
SmoI CTYRAG 2 cut(s) 913, 1969
SseBI AGGCCT 1 cut(s) 911
SsiI CCGC 6 cut(s) 153, 422, 1220, 1453, 1520, 2248
SspI AATATT 1 cut(s) 25
SspMI CTAG 5 cut(s) 111, 165, 1181, 2162, 2219
SstI GAGCTC 1 cut(s) 1025
StuI AGGCCT 1 cut(s) 911
StyD4I CCNGG 3 cut(s) 340, 817, 1397
StyI CCWWGG 6 cut(s) 325, 849, 1404, 1854, 2186, 2281
TaaI ACNGT 6 cut(s) 536, 595, 1018, 2200, 2308, 2462
TaiI ACGT 1 cut(s) 1816
TaqI TCGA 6 cut(s) 158, 1025, 1601, 1801, 1970, 2137
TatI WGTACW 1 cut(s) 736
Tru1I TTAA 6 cut(s) 1458, 1638, 1757, 1982, 1998, 2579
Tru9I TTAA 6 cut(s) 1458, 1638, 1757, 1982, 1998, 2579
TscAI CASTG 9 cut(s) 139, 874, 942, 1003, 1023, 1678, 2311, 2544, 2561
TseFI GTSAC 2 cut(s) 813, 853
TseI GCWGC 5 cut(s) 98, 269, 986, 1058, 2468
Tsp45I GTSAC 2 cut(s) 813, 853
TspGWI ACGGA 3 cut(s) 942, 1185, 2143
TspRI CASTG 9 cut(s) 139, 874, 942, 1003, 1023, 1678, 2311, 2544, 2561
Van91I CCANNNNNTGG 1 cut(s) 2287
VpaK11BI GGWCC 5 cut(s) 322, 415, 1001, 1350, 1504
VspI ATTAAT 1 cut(s) 1458
XapI RAATTY 6 cut(s) 160, 183, 1463, 1657, 1919, 2313
XbaI TCTAGA 1 cut(s) 2161
XceI RCATGY 1 cut(s) 1394
XhoI CTCGAG 1 cut(s) 1969
XmnI GAANNNNTTC 2 cut(s) 24, 2240
XspI CTAG 5 cut(s) 111, 165, 1181, 2162, 2219
Zsp2I ATGCAT 1 cut(s) 2368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.