receptor-like protein kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD04G1237900.v1.1 MD04G1238200.v1.1 MD04G1238300.v1.1 MD04G1238400.v1.1 MD12G1256100.v1.1 MD12G1256200.v1.1 MD12G1256400.v1.1 MD12G1256500.v1.1 |
| pyrus_communis | pycom02g03710 pycom04g21120 pycom04g21130 pycom12g23490 pycom12g23510 pycom17g22130 |
| rosa_chinensis | RchiOBHm_Chr0c37g0502971 RchiOBHm_Chr6g0265111 RchiOBHm_Chr6g0265191 |
| rosa_multiflora | Rmu_co8298979.1_g000001 Rmu_ssc0000359.1_g000070 |
| rosa_samantha | Rh6AG136900 Rh6BG133800 |
| rosa_wichuraiana | Rw6G011810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 506 |
| Acc36I | ACCTGC | 2 cut(s) | 506, 995 |
| Acc65I | GGTACC | 1 cut(s) | 410 |
| AccB1I | GGYRCC | 1 cut(s) | 410 |
| AccI | GTMKAC | 1 cut(s) | 522 |
| AccII | CGCG | 4 cut(s) | 154, 359, 612, 823 |
| AccIII | TCCGGA | 1 cut(s) | 1027 |
| AciI | CCGC | 6 cut(s) | 154, 210, 359, 408, 623, 1014 |
| AclWI | GGATC | 6 cut(s) | 76, 166, 770, 1019, 1242, 1255 |
| AcoI | YGGCCR | 1 cut(s) | 1561 |
| AcsI | RAATTY | 2 cut(s) | 1208, 1547 |
| AfaI | GTAC | 5 cut(s) | 208, 412, 1009, 1507, 1521 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 691, 847, 996, 1054, 1265 |
| AflIII | ACRYGT | 1 cut(s) | 720 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 977, 1009 |
| Alw21I | GWGCWC | 2 cut(s) | 262, 576 |
| Alw26I | GTCTC | 1 cut(s) | 867 |
| Alw44I | GTGCAC | 1 cut(s) | 258 |
| AlwI | GGATC | 6 cut(s) | 76, 166, 770, 1019, 1242, 1255 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 637 |
| Ama87I | CYCGRG | 1 cut(s) | 136 |
| Aor13HI | TCCGGA | 1 cut(s) | 1027 |
| AoxI | GGCC | 4 cut(s) | 439, 915, 1256, 1561 |
| ApaLI | GTGCAC | 1 cut(s) | 258 |
| ApeKI | GCWGC | 5 cut(s) | 371, 512, 631, 646, 1303 |
| ApoI | RAATTY | 2 cut(s) | 1208, 1547 |
| AseI | ATTAAT | 3 cut(s) | 501, 974, 1413 |
| Asp718I | GGTACC | 1 cut(s) | 410 |
| AspLEI | GCGC | 6 cut(s) | 651, 704, 823, 1239, 1297, 1316 |
| AspS9I | GGNCC | 5 cut(s) | 479, 731, 901, 950, 1257 |
| AsuC2I | CCSGG | 2 cut(s) | 582, 997 |
| AsuHPI | GGTGA | 3 cut(s) | 461, 1139, 1280 |
| AsuII | TTCGAA | 2 cut(s) | 1095, 1551 |
| AvaI | CYCGRG | 1 cut(s) | 136 |
| AvaII | GGWCC | 4 cut(s) | 479, 731, 901, 950 |
| BaeGI | GKGCMC | 1 cut(s) | 262 |
| BamHI | GGATCC | 1 cut(s) | 1247 |
| BanI | GGYRCC | 1 cut(s) | 410 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 274, 306 |
| BbsI | GAAGAC | 1 cut(s) | 1063 |
| Bbv12I | GWGCWC | 2 cut(s) | 262, 576 |
| BbvI | GCAGC | 5 cut(s) | 383, 499, 633, 643, 1290 |
| BccI | CCATC | 4 cut(s) | 940, 1258, 1467, 1529 |
| BceAI | ACGGC | 2 cut(s) | 562, 1271 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1358, 1392 |
| BciVI | GTATCC | 1 cut(s) | 524 |
| BclI | TGATCA | 2 cut(s) | 274, 466 |
| BcnI | CCSGG | 2 cut(s) | 582, 997 |
| BcoDI | GTCTC | 1 cut(s) | 867 |
| BfaI | CTAG | 3 cut(s) | 393, 1044, 1163 |
| BfmI | CTRYAG | 4 cut(s) | 291, 513, 1242, 1304 |
| BfuAI | ACCTGC | 2 cut(s) | 506, 995 |
| BfuI | GTATCC | 1 cut(s) | 524 |
| BisI | GCNGC | 5 cut(s) | 372, 513, 632, 647, 1304 |
| BlsI | GCNGC | 5 cut(s) | 373, 514, 633, 648, 1305 |
| BmcAI | AGTACT | 2 cut(s) | 1507, 1521 |
| Bme1390I | CCNGG | 2 cut(s) | 582, 997 |
| Bme18I | GGWCC | 4 cut(s) | 479, 731, 901, 950 |
| BmeT110I | CYCGRG | 1 cut(s) | 136 |
| BmgT120I | GGNCC | 5 cut(s) | 479, 731, 901, 950, 1257 |
| BmiI | GGNNCC | 5 cut(s) | 412, 733, 791, 951, 1249 |
| BmrFI | CCNGG | 2 cut(s) | 582, 997 |
| BmrI | ACTGGG | 1 cut(s) | 1488 |
| BmsI | GCATC | 2 cut(s) | 819, 1309 |
| BmuI | ACTGGG | 1 cut(s) | 1488 |
| BpiI | GAAGAC | 1 cut(s) | 1063 |
| BpmI | CTGGAG | 1 cut(s) | 1319 |
| Bpu14I | TTCGAA | 2 cut(s) | 1095, 1551 |
| BpuEI | CTTGAG | 1 cut(s) | 1307 |
| BpuMI | CCSGG | 2 cut(s) | 582, 997 |
| Bsa29I | ATCGAT | 1 cut(s) | 80 |
| BsaBI | GATNNNNATC | 1 cut(s) | 300 |
| BsaJI | CCNNGG | 2 cut(s) | 996, 1445 |
| BsaWI | WCCGGW | 2 cut(s) | 1027, 1192 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 822, 852 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 691, 847, 996, 1054, 1265 |
| Bse118I | RCCGGY | 1 cut(s) | 1563 |
| Bse1I | ACTGG | 3 cut(s) | 1384, 1463, 1483 |
| Bse8I | GATNNNNATC | 1 cut(s) | 300 |
| BseAI | TCCGGA | 1 cut(s) | 1027 |
| BseCI | ATCGAT | 1 cut(s) | 80 |
| BseDI | CCNNGG | 2 cut(s) | 996, 1445 |
| BseGI | GGATG | 1 cut(s) | 1459 |
| BseJI | GATNNNNATC | 1 cut(s) | 300 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 691, 847, 996, 1054, 1265 |
| BseNI | ACTGG | 3 cut(s) | 1384, 1463, 1483 |
| BseSI | GKGCMC | 1 cut(s) | 262 |
| BseXI | GCAGC | 5 cut(s) | 383, 499, 633, 643, 1290 |
| BseYI | CCCAGC | 1 cut(s) | 1150 |
| BsgI | GTGCAG | 1 cut(s) | 650 |
| Bsh1236I | CGCG | 4 cut(s) | 154, 359, 612, 823 |
| Bsh1285I | CGRYCG | 1 cut(s) | 95 |
| BshFI | GGCC | 4 cut(s) | 441, 917, 1258, 1563 |
| BshNI | GGYRCC | 1 cut(s) | 410 |
| BshVI | ATCGAT | 1 cut(s) | 80 |
| BsiEI | CGRYCG | 1 cut(s) | 95 |
| BsiHKAI | GWGCWC | 2 cut(s) | 262, 576 |
| BsiHKCI | CYCGRG | 1 cut(s) | 136 |
| BsiSI | CCGG | 6 cut(s) | 582, 934, 996, 1028, 1193, 1564 |
| BslFI | GGGAC | 2 cut(s) | 621, 717 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 691, 847, 996, 1054, 1265 |
| BsmAI | GTCTC | 1 cut(s) | 867 |
| BsmFI | GGGAC | 2 cut(s) | 621, 717 |
| BsnI | GGCC | 4 cut(s) | 441, 917, 1258, 1563 |
| BsoBI | CYCGRG | 1 cut(s) | 136 |
| Bsp119I | TTCGAA | 2 cut(s) | 1095, 1551 |
| Bsp1286I | GDGCHC | 2 cut(s) | 262, 576 |
| Bsp13I | TCCGGA | 1 cut(s) | 1027 |
| BspACI | CCGC | 6 cut(s) | 154, 210, 359, 408, 623, 1014 |
| BspANI | GGCC | 4 cut(s) | 441, 917, 1258, 1563 |
| BspDI | ATCGAT | 1 cut(s) | 80 |
| BspEI | TCCGGA | 1 cut(s) | 1027 |
| BspFNI | CGCG | 4 cut(s) | 154, 359, 612, 823 |
| BspLI | GGNNCC | 5 cut(s) | 412, 733, 791, 951, 1249 |
| BspMAI | CTGCAG | 2 cut(s) | 517, 1308 |
| BspMI | ACCTGC | 2 cut(s) | 506, 995 |
| BspPI | GGATC | 6 cut(s) | 76, 166, 770, 1019, 1242, 1255 |
| BspT104I | TTCGAA | 2 cut(s) | 1095, 1551 |
| BspT107I | GGYRCC | 1 cut(s) | 410 |
| BsrFI | RCCGGY | 1 cut(s) | 1563 |
| BsrI | ACTGG | 3 cut(s) | 1384, 1463, 1483 |
| BssAI | RCCGGY | 1 cut(s) | 1563 |
| BssECI | CCNNGG | 2 cut(s) | 996, 1445 |
| Bst4CI | ACNGT | 6 cut(s) | 57, 93, 216, 497, 562, 639 |
| BstBI | TTCGAA | 2 cut(s) | 1095, 1551 |
| BstC8I | GCNNGC | 4 cut(s) | 644, 825, 858, 1049 |
| BstDEI | CTNAG | 2 cut(s) | 128, 910 |
| BstDSI | CCRYGG | 1 cut(s) | 1445 |
| BstF5I | GGATG | 1 cut(s) | 1459 |
| BstFNI | CGCG | 4 cut(s) | 154, 359, 612, 823 |
| BstHHI | GCGC | 6 cut(s) | 651, 704, 823, 1239, 1297, 1316 |
| BstMAI | GTCTC | 1 cut(s) | 867 |
| BstMCI | CGRYCG | 1 cut(s) | 95 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 320, 648, 1151, 1303 |
| BstNSI | RCATGY | 3 cut(s) | 724, 860, 1014 |
| BstSCI | CCNGG | 2 cut(s) | 580, 995 |
| BstSFI | CTRYAG | 4 cut(s) | 291, 513, 1242, 1304 |
| BstSLI | GKGCMC | 1 cut(s) | 262 |
| BstUI | CGCG | 4 cut(s) | 154, 359, 612, 823 |
| BstV1I | GCAGC | 5 cut(s) | 383, 499, 633, 643, 1290 |
| BstV2I | GAAGAC | 1 cut(s) | 1063 |
| BstX2I | RGATCY | 3 cut(s) | 171, 775, 1247 |
| BstYI | RGATCY | 3 cut(s) | 171, 775, 1247 |
| Bsu15I | ATCGAT | 1 cut(s) | 80 |
| BsuI | GTATCC | 1 cut(s) | 524 |
| BsuRI | GGCC | 4 cut(s) | 441, 917, 1258, 1563 |
| BsuTUI | ATCGAT | 1 cut(s) | 80 |
| BtgI | CCRYGG | 1 cut(s) | 1445 |
| BtsCI | GGATG | 1 cut(s) | 1459 |
| BveI | ACCTGC | 2 cut(s) | 506, 995 |
| Cac8I | GCNNGC | 4 cut(s) | 644, 825, 858, 1049 |
| CaiI | CAGNNNCTG | 1 cut(s) | 637 |
| CfoI | GCGC | 6 cut(s) | 651, 704, 823, 1239, 1297, 1316 |
| Cfr10I | RCCGGY | 1 cut(s) | 1563 |
| Cfr13I | GGNCC | 5 cut(s) | 479, 731, 901, 950, 1257 |
| ClaI | ATCGAT | 1 cut(s) | 80 |
| CseI | GACGC | 1 cut(s) | 618 |
| Csp6I | GTAC | 5 cut(s) | 207, 411, 1008, 1506, 1520 |
| CviAII | CATG | 5 cut(s) | 176, 721, 857, 1011, 1177 |
| CviQI | GTAC | 5 cut(s) | 207, 411, 1008, 1506, 1520 |
| DdeI | CTNAG | 2 cut(s) | 128, 910 |
| DraI | TTTAAA | 1 cut(s) | 160 |
| EaeI | YGGCCR | 1 cut(s) | 1561 |
| EciI | GGCGGA | 1 cut(s) | 638 |
| Eco32I | GATATC | 1 cut(s) | 1398 |
| Eco47I | GGWCC | 4 cut(s) | 479, 731, 901, 950 |
| Eco88I | CYCGRG | 1 cut(s) | 136 |
| EcoO109I | RGGNCCY | 1 cut(s) | 950 |
| EcoRI | GAATTC | 1 cut(s) | 1547 |
| EcoRV | GATATC | 1 cut(s) | 1398 |
| EcoT22I | ATGCAT | 1 cut(s) | 973 |
| FaeI | CATG | 5 cut(s) | 179, 724, 860, 1014, 1180 |
| FaqI | GGGAC | 2 cut(s) | 621, 717 |
| FatI | CATG | 5 cut(s) | 175, 720, 856, 1010, 1176 |
| FauI | CCCGC | 1 cut(s) | 1007 |
| FbaI | TGATCA | 2 cut(s) | 274, 466 |
| FblI | GTMKAC | 1 cut(s) | 522 |
| Fnu4HI | GCNGC | 5 cut(s) | 372, 513, 632, 647, 1304 |
| FokI | GGATG | 1 cut(s) | 1446 |
| Fsp4HI | GCNGC | 5 cut(s) | 372, 513, 632, 647, 1304 |
| FspBI | CTAG | 3 cut(s) | 393, 1044, 1163 |
| GlaI | GCGC | 6 cut(s) | 650, 703, 822, 1238, 1296, 1315 |
| GluI | GCNGC | 5 cut(s) | 372, 513, 632, 647, 1304 |
| GsaI | CCCAGC | 1 cut(s) | 1154 |
| GsuI | CTGGAG | 1 cut(s) | 1319 |
| HaeIII | GGCC | 4 cut(s) | 441, 917, 1258, 1563 |
| HapII | CCGG | 6 cut(s) | 582, 934, 996, 1028, 1193, 1564 |
| HgaI | GACGC | 1 cut(s) | 618 |
| HhaI | GCGC | 6 cut(s) | 651, 704, 823, 1239, 1297, 1316 |
| Hin1II | CATG | 5 cut(s) | 179, 724, 860, 1014, 1180 |
| Hin6I | GCGC | 6 cut(s) | 649, 702, 821, 1237, 1295, 1314 |
| HinP1I | GCGC | 6 cut(s) | 649, 702, 821, 1237, 1295, 1314 |
| HindIII | AAGCTT | 2 cut(s) | 907, 920 |
| HinfI | GANTC | 9 cut(s) | 71, 77, 109, 132, 678, 1166, 1196, 1450, 1496 |
| HpaII | CCGG | 6 cut(s) | 582, 934, 996, 1028, 1193, 1564 |
| HphI | GGTGA | 3 cut(s) | 461, 1139, 1280 |
| Hpy166II | GTNNAC | 4 cut(s) | 260, 523, 712, 1445 |
| Hpy188III | TCNNGA | 8 cut(s) | 138, 305, 329, 1028, 1119, 1163, 1391, 1493 |
| Hpy8I | GTNNAC | 4 cut(s) | 260, 523, 712, 1445 |
| Hpy99I | CGWCG | 1 cut(s) | 348 |
| HpyAV | CCTTC | 3 cut(s) | 96, 470, 598 |
| HpyCH4III | ACNGT | 6 cut(s) | 57, 93, 216, 497, 562, 639 |
| HpyCH4IV | ACGT | 1 cut(s) | 229 |
| HpyCH4V | TGCA | 8 cut(s) | 260, 515, 631, 810, 827, 971, 1225, 1306 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 320, 648, 1151, 1303 |
| HpyF3I | CTNAG | 2 cut(s) | 128, 910 |
| HpySE526I | ACGT | 1 cut(s) | 229 |
| Hsp92II | CATG | 5 cut(s) | 179, 724, 860, 1014, 1180 |
| HspAI | GCGC | 6 cut(s) | 649, 702, 821, 1237, 1295, 1314 |
| Kpn2I | TCCGGA | 1 cut(s) | 1027 |
| KpnI | GGTACC | 1 cut(s) | 414 |
| Ksp22I | TGATCA | 2 cut(s) | 274, 466 |
| LmnI | GCTCC | 2 cut(s) | 789, 1300 |
| Lsp1109I | GCAGC | 5 cut(s) | 383, 499, 633, 643, 1290 |
| LweI | GCATC | 2 cut(s) | 819, 1309 |
| MaeI | CTAG | 3 cut(s) | 393, 1044, 1163 |
| MaeII | ACGT | 1 cut(s) | 229 |
| MaeIII | GTNAC | 4 cut(s) | 225, 396, 550, 884 |
| MboII | GAAGA | 7 cut(s) | 104, 118, 226, 262, 294, 344, 1063 |
| MflI | RGATCY | 3 cut(s) | 171, 775, 1247 |
| MhlI | GDGCHC | 2 cut(s) | 262, 576 |
| MlyI | GAGTC | 2 cut(s) | 1160, 1444 |
| MmeI | TCCRAC | 1 cut(s) | 76 |
| MnlI | CCTC | 8 cut(s) | 96, 551, 619, 768, 907, 963, 1270, 1329 |
| Mph1103I | ATGCAT | 1 cut(s) | 973 |
| MroI | TCCGGA | 1 cut(s) | 1027 |
| MseI | TTAA | 9 cut(s) | 47, 159, 168, 435, 501, 662, 852, 974, 1413 |
| MslI | CAYNNNNRTG | 2 cut(s) | 815, 1135 |
| MspA1I | CMGCKG | 2 cut(s) | 646, 1154 |
| MspI | CCGG | 6 cut(s) | 582, 934, 996, 1028, 1193, 1564 |
| MspR9I | CCNGG | 2 cut(s) | 582, 997 |
| MssI | GTTTAAAC | 1 cut(s) | 160 |
| MvnI | CGCG | 4 cut(s) | 154, 359, 612, 823 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 320, 648, 1151, 1303 |
| NciI | CCSGG | 2 cut(s) | 582, 997 |
| NlaIII | CATG | 5 cut(s) | 179, 724, 860, 1014, 1180 |
| NlaIV | GGNNCC | 5 cut(s) | 412, 733, 791, 951, 1249 |
| NmuCI | GTSAC | 2 cut(s) | 225, 884 |
| NsiI | ATGCAT | 1 cut(s) | 973 |
| NspI | RCATGY | 3 cut(s) | 724, 860, 1014 |
| NspV | TTCGAA | 2 cut(s) | 1095, 1551 |
| PaeI | GCATGC | 1 cut(s) | 860 |
| PaqCI | CACCTGC | 1 cut(s) | 506 |
| PciI | ACATGT | 1 cut(s) | 720 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 97 |
| PfeI | GAWTC | 7 cut(s) | 71, 77, 109, 132, 678, 1196, 1496 |
| PkrI | GCNGC | 5 cut(s) | 373, 514, 633, 648, 1305 |
| PleI | GAGTC | 2 cut(s) | 1160, 1444 |
| PmeI | GTTTAAAC | 1 cut(s) | 160 |
| PpsI | GAGTC | 2 cut(s) | 1160, 1444 |
| PpuMI | RGGWCCY | 1 cut(s) | 950 |
| PscI | ACATGT | 1 cut(s) | 720 |
| PshBI | ATTAAT | 3 cut(s) | 501, 974, 1413 |
| Psp5II | RGGWCCY | 1 cut(s) | 950 |
| PspFI | CCCAGC | 1 cut(s) | 1150 |
| PspN4I | GGNNCC | 5 cut(s) | 412, 733, 791, 951, 1249 |
| PspPI | GGNCC | 5 cut(s) | 479, 731, 901, 950, 1257 |
| PspPPI | RGGWCCY | 1 cut(s) | 950 |
| PstI | CTGCAG | 2 cut(s) | 517, 1308 |
| PstNI | CAGNNNCTG | 1 cut(s) | 637 |
| PsuI | RGATCY | 3 cut(s) | 171, 775, 1247 |
| PvuII | CAGCTG | 2 cut(s) | 646, 1154 |
| RsaI | GTAC | 5 cut(s) | 208, 412, 1009, 1507, 1521 |
| RsaNI | GTAC | 5 cut(s) | 207, 411, 1008, 1506, 1520 |
| RseI | CAYNNNNRTG | 2 cut(s) | 815, 1135 |
| SaqAI | TTAA | 9 cut(s) | 47, 159, 168, 435, 501, 662, 852, 974, 1413 |
| SatI | GCNGC | 5 cut(s) | 372, 513, 632, 647, 1304 |
| Sau96I | GGNCC | 5 cut(s) | 479, 731, 901, 950, 1257 |
| ScaI | AGTACT | 2 cut(s) | 1507, 1521 |
| SchI | GAGTC | 2 cut(s) | 1160, 1444 |
| ScrFI | CCNGG | 2 cut(s) | 582, 997 |
| SduI | GDGCHC | 2 cut(s) | 262, 576 |
| SfaNI | GCATC | 2 cut(s) | 819, 1309 |
| SfcI | CTRYAG | 4 cut(s) | 291, 513, 1242, 1304 |
| SfuI | TTCGAA | 2 cut(s) | 1095, 1551 |
| SinI | GGWCC | 4 cut(s) | 479, 731, 901, 950 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 815, 1135 |
| SmlI | CTYRAG | 1 cut(s) | 1286 |
| SmoI | CTYRAG | 1 cut(s) | 1286 |
| SphI | GCATGC | 1 cut(s) | 860 |
| SsiI | CCGC | 6 cut(s) | 154, 210, 359, 408, 623, 1014 |
| SspI | AATATT | 2 cut(s) | 1115, 1556 |
| SspMI | CTAG | 3 cut(s) | 393, 1044, 1163 |
| StyD4I | CCNGG | 2 cut(s) | 580, 995 |
| TaaI | ACNGT | 6 cut(s) | 57, 93, 216, 497, 562, 639 |
| TaiI | ACGT | 1 cut(s) | 232 |
| TaqI | TCGA | 5 cut(s) | 80, 304, 570, 1095, 1551 |
| TatI | WGTACW | 2 cut(s) | 1505, 1519 |
| TfiI | GAWTC | 7 cut(s) | 71, 77, 109, 132, 678, 1196, 1496 |
| Tru1I | TTAA | 9 cut(s) | 47, 159, 168, 435, 501, 662, 852, 974, 1413 |
| Tru9I | TTAA | 9 cut(s) | 47, 159, 168, 435, 501, 662, 852, 974, 1413 |
| TseFI | GTSAC | 2 cut(s) | 225, 884 |
| TseI | GCWGC | 5 cut(s) | 371, 512, 631, 646, 1303 |
| Tsp45I | GTSAC | 2 cut(s) | 225, 884 |
| TspDTI | ATGAA | 4 cut(s) | 17, 258, 324, 1188 |
| TspGWI | ACGGA | 4 cut(s) | 768, 979, 1070, 1462 |
| VneI | GTGCAC | 1 cut(s) | 258 |
| VpaK11BI | GGWCC | 4 cut(s) | 479, 731, 901, 950 |
| VspI | ATTAAT | 3 cut(s) | 501, 974, 1413 |
| XapI | RAATTY | 2 cut(s) | 1208, 1547 |
| XbaI | TCTAGA | 1 cut(s) | 1162 |
| XceI | RCATGY | 3 cut(s) | 724, 860, 1014 |
| XmiI | GTMKAC | 1 cut(s) | 522 |
| XspI | CTAG | 3 cut(s) | 393, 1044, 1163 |
| ZrmI | AGTACT | 2 cut(s) | 1507, 1521 |
| Zsp2I | ATGCAT | 1 cut(s) | 973 |