pycom04g21120

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
22445198 .. 22446891
1694 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g21120.3

Sequence Viewer

Length: 1569 bp
ATGAACGAATATGGTTTTTCAAAGAAATACTATTACGATTACCATTTAATCCAACGGTCAAATAATTTTGAATCTGAATCGATCCCTCTACGGTCGTGCCGAAGGAAGAATCTTCCCAACAATTTCCTAAGAATCTCGGGATATATACCAACGCGGTTTAAACGAATTAAGATCCATGTTATATTTCTTATGGGATTTAGTAGTAGTACCGCACAGTCAGTTATGTCACGTTTCTTCAATAATTTGTGGAAGAAATGTGCACCATATTCATCTGATCATAGAAGAAAACCTACAGATACAGATCGAGATGAAGCTAAATGGGCGTTTCCAGAAGAATTGTGTCGTCGGTTTTCACTCGCGGAGATCATAGCAGCAACTCAAAACTTCAATGCTAGGTTACACATTAGCGGTACCCGAAACTTGTCATTTGAAGTTAATGGCCTAACAGAAAAGTTTTTGGTGTTTGATCACCTTGAAGGTCCGAAAAGAAAAGACGGTATTAATGTTAGTGCTGCAGGTGTCTACAAAGGATACACCAACCTCAACGGCGTAACTTCTACGGTGGCAATCGAGCACATTCCCGGCACACAATCAGACATTCAGAAGGGACGCGAGTTCAAGGCGGAGGTGCAGCTACTGTGCCAGCTGCGCCACCCCAATTTAATCTCTCTGATCGGATTCTGCCAAGAAAAGGGAGAGTGCGCCATTGTTTACAACTACATGTCCAATGGTCCCCTTTCTGATTTCCTTTTCAATCCTCATAACAATAATAAAGATCCGTTGTCTTGGAGCCAAAGGCTGAATATCTGCATCGGGGTGGCGCGTGCAATACACTATCTCCACACAGGGGTTAAGCATGCTGTAATCCACCGAGACATCAAATGTGACAACATACTCTTGGACCAAAGCTTAGAGGCCAAGCTTTCTAACTTCCGGCTGTCCAAGATGGGTCCTCCTACTTTGTCAAATGCATTAATCAGATTGAACTCCGTTTCCGGGGTGGCAGGTACATGCGGGTATATTGATCCGGAGTATGATTTGTCTAGCCAGCTTACGGAAAAATCTGATGTCTTCTCGTTCGGAATGGTGTTATTCGAAGTATTGTCTGCTAAATATTCAAGAGAGATACCACAATTATGTATCGCTCACCCAGCTGATATTCTAGACTCATTTCTCATGGGAAAAGTAGCACCGGATTCATTGATAAAATTTTTGGACATCTTGCAAAGATGTGTGCGCCCTACAGGATCCCAACGGCCCACGATGGGTGAAGTGGAGGTGGAACTTGAGTGTGCGCTGGAGCTGCAGGAGAGCGCAGATGCCGAAAAGGAGTTGAGGACACCAAGCACTTCGCTTGGTTGTCCTGCCGATGACTATGCCTACCAGTATCAAGAGATATCACTTTCTGAAATTAATGATGTTTTCTGTTTTTTGTGTAATCGTCCACGGACTCCACGCCATCCAGTAGTTAGCTCAACTGGGTCTGCTGATCTTGATTCAATTAGTACTGATCTTTCAGTACTTTCCGATGATGATGGTAGCTCTGAATTCGAATATTCTGGCCGGTAA
Functional Annotation

Protein Analysis

523

Amino Acids

58.84

Weight (kDa)

6.41

Isoelectric Point (pI)

44.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 506
Acc36I ACCTGC 2 cut(s) 506, 995
Acc65I GGTACC 1 cut(s) 410
AccB1I GGYRCC 1 cut(s) 410
AccI GTMKAC 1 cut(s) 522
AccII CGCG 4 cut(s) 154, 359, 612, 823
AccIII TCCGGA 1 cut(s) 1027
AciI CCGC 6 cut(s) 154, 210, 359, 408, 623, 1014
AclWI GGATC 6 cut(s) 76, 166, 770, 1019, 1242, 1255
AcoI YGGCCR 1 cut(s) 1561
AcsI RAATTY 2 cut(s) 1208, 1547
AfaI GTAC 5 cut(s) 208, 412, 1009, 1507, 1521
AfiI CCNNNNNNNGG 5 cut(s) 691, 847, 996, 1054, 1265
AflIII ACRYGT 1 cut(s) 720
AloI GAACNNNNNNTCC 2 cut(s) 977, 1009
Alw21I GWGCWC 2 cut(s) 262, 576
Alw26I GTCTC 1 cut(s) 867
Alw44I GTGCAC 1 cut(s) 258
AlwI GGATC 6 cut(s) 76, 166, 770, 1019, 1242, 1255
AlwNI CAGNNNCTG 1 cut(s) 637
Ama87I CYCGRG 1 cut(s) 136
Aor13HI TCCGGA 1 cut(s) 1027
AoxI GGCC 4 cut(s) 439, 915, 1256, 1561
ApaLI GTGCAC 1 cut(s) 258
ApeKI GCWGC 5 cut(s) 371, 512, 631, 646, 1303
ApoI RAATTY 2 cut(s) 1208, 1547
AseI ATTAAT 3 cut(s) 501, 974, 1413
Asp718I GGTACC 1 cut(s) 410
AspLEI GCGC 6 cut(s) 651, 704, 823, 1239, 1297, 1316
AspS9I GGNCC 5 cut(s) 479, 731, 901, 950, 1257
AsuC2I CCSGG 2 cut(s) 582, 997
AsuHPI GGTGA 3 cut(s) 461, 1139, 1280
AsuII TTCGAA 2 cut(s) 1095, 1551
AvaI CYCGRG 1 cut(s) 136
AvaII GGWCC 4 cut(s) 479, 731, 901, 950
BaeGI GKGCMC 1 cut(s) 262
BamHI GGATCC 1 cut(s) 1247
BanI GGYRCC 1 cut(s) 410
BarI GAAGNNNNNNTAC 2 cut(s) 274, 306
BbsI GAAGAC 1 cut(s) 1063
Bbv12I GWGCWC 2 cut(s) 262, 576
BbvI GCAGC 5 cut(s) 383, 499, 633, 643, 1290
BccI CCATC 4 cut(s) 940, 1258, 1467, 1529
BceAI ACGGC 2 cut(s) 562, 1271
BcgI CGANNNNNNTGC 2 cut(s) 1358, 1392
BciVI GTATCC 1 cut(s) 524
BclI TGATCA 2 cut(s) 274, 466
BcnI CCSGG 2 cut(s) 582, 997
BcoDI GTCTC 1 cut(s) 867
BfaI CTAG 3 cut(s) 393, 1044, 1163
BfmI CTRYAG 4 cut(s) 291, 513, 1242, 1304
BfuAI ACCTGC 2 cut(s) 506, 995
BfuI GTATCC 1 cut(s) 524
BisI GCNGC 5 cut(s) 372, 513, 632, 647, 1304
BlsI GCNGC 5 cut(s) 373, 514, 633, 648, 1305
BmcAI AGTACT 2 cut(s) 1507, 1521
Bme1390I CCNGG 2 cut(s) 582, 997
Bme18I GGWCC 4 cut(s) 479, 731, 901, 950
BmeT110I CYCGRG 1 cut(s) 136
BmgT120I GGNCC 5 cut(s) 479, 731, 901, 950, 1257
BmiI GGNNCC 5 cut(s) 412, 733, 791, 951, 1249
BmrFI CCNGG 2 cut(s) 582, 997
BmrI ACTGGG 1 cut(s) 1488
BmsI GCATC 2 cut(s) 819, 1309
BmuI ACTGGG 1 cut(s) 1488
BpiI GAAGAC 1 cut(s) 1063
BpmI CTGGAG 1 cut(s) 1319
Bpu14I TTCGAA 2 cut(s) 1095, 1551
BpuEI CTTGAG 1 cut(s) 1307
BpuMI CCSGG 2 cut(s) 582, 997
Bsa29I ATCGAT 1 cut(s) 80
BsaBI GATNNNNATC 1 cut(s) 300
BsaJI CCNNGG 2 cut(s) 996, 1445
BsaWI WCCGGW 2 cut(s) 1027, 1192
BsaXI ACNNNNNCTCC 2 cut(s) 822, 852
Bsc4I CCNNNNNNNGG 5 cut(s) 691, 847, 996, 1054, 1265
Bse118I RCCGGY 1 cut(s) 1563
Bse1I ACTGG 3 cut(s) 1384, 1463, 1483
Bse8I GATNNNNATC 1 cut(s) 300
BseAI TCCGGA 1 cut(s) 1027
BseCI ATCGAT 1 cut(s) 80
BseDI CCNNGG 2 cut(s) 996, 1445
BseGI GGATG 1 cut(s) 1459
BseJI GATNNNNATC 1 cut(s) 300
BseLI CCNNNNNNNGG 5 cut(s) 691, 847, 996, 1054, 1265
BseNI ACTGG 3 cut(s) 1384, 1463, 1483
BseSI GKGCMC 1 cut(s) 262
BseXI GCAGC 5 cut(s) 383, 499, 633, 643, 1290
BseYI CCCAGC 1 cut(s) 1150
BsgI GTGCAG 1 cut(s) 650
Bsh1236I CGCG 4 cut(s) 154, 359, 612, 823
Bsh1285I CGRYCG 1 cut(s) 95
BshFI GGCC 4 cut(s) 441, 917, 1258, 1563
BshNI GGYRCC 1 cut(s) 410
BshVI ATCGAT 1 cut(s) 80
BsiEI CGRYCG 1 cut(s) 95
BsiHKAI GWGCWC 2 cut(s) 262, 576
BsiHKCI CYCGRG 1 cut(s) 136
BsiSI CCGG 6 cut(s) 582, 934, 996, 1028, 1193, 1564
BslFI GGGAC 2 cut(s) 621, 717
BslI CCNNNNNNNGG 5 cut(s) 691, 847, 996, 1054, 1265
BsmAI GTCTC 1 cut(s) 867
BsmFI GGGAC 2 cut(s) 621, 717
BsnI GGCC 4 cut(s) 441, 917, 1258, 1563
BsoBI CYCGRG 1 cut(s) 136
Bsp119I TTCGAA 2 cut(s) 1095, 1551
Bsp1286I GDGCHC 2 cut(s) 262, 576
Bsp13I TCCGGA 1 cut(s) 1027
BspACI CCGC 6 cut(s) 154, 210, 359, 408, 623, 1014
BspANI GGCC 4 cut(s) 441, 917, 1258, 1563
BspDI ATCGAT 1 cut(s) 80
BspEI TCCGGA 1 cut(s) 1027
BspFNI CGCG 4 cut(s) 154, 359, 612, 823
BspLI GGNNCC 5 cut(s) 412, 733, 791, 951, 1249
BspMAI CTGCAG 2 cut(s) 517, 1308
BspMI ACCTGC 2 cut(s) 506, 995
BspPI GGATC 6 cut(s) 76, 166, 770, 1019, 1242, 1255
BspT104I TTCGAA 2 cut(s) 1095, 1551
BspT107I GGYRCC 1 cut(s) 410
BsrFI RCCGGY 1 cut(s) 1563
BsrI ACTGG 3 cut(s) 1384, 1463, 1483
BssAI RCCGGY 1 cut(s) 1563
BssECI CCNNGG 2 cut(s) 996, 1445
Bst4CI ACNGT 6 cut(s) 57, 93, 216, 497, 562, 639
BstBI TTCGAA 2 cut(s) 1095, 1551
BstC8I GCNNGC 4 cut(s) 644, 825, 858, 1049
BstDEI CTNAG 2 cut(s) 128, 910
BstDSI CCRYGG 1 cut(s) 1445
BstF5I GGATG 1 cut(s) 1459
BstFNI CGCG 4 cut(s) 154, 359, 612, 823
BstHHI GCGC 6 cut(s) 651, 704, 823, 1239, 1297, 1316
BstMAI GTCTC 1 cut(s) 867
BstMCI CGRYCG 1 cut(s) 95
BstMWI GCNNNNNNNGC 4 cut(s) 320, 648, 1151, 1303
BstNSI RCATGY 3 cut(s) 724, 860, 1014
BstSCI CCNGG 2 cut(s) 580, 995
BstSFI CTRYAG 4 cut(s) 291, 513, 1242, 1304
BstSLI GKGCMC 1 cut(s) 262
BstUI CGCG 4 cut(s) 154, 359, 612, 823
BstV1I GCAGC 5 cut(s) 383, 499, 633, 643, 1290
BstV2I GAAGAC 1 cut(s) 1063
BstX2I RGATCY 3 cut(s) 171, 775, 1247
BstYI RGATCY 3 cut(s) 171, 775, 1247
Bsu15I ATCGAT 1 cut(s) 80
BsuI GTATCC 1 cut(s) 524
BsuRI GGCC 4 cut(s) 441, 917, 1258, 1563
BsuTUI ATCGAT 1 cut(s) 80
BtgI CCRYGG 1 cut(s) 1445
BtsCI GGATG 1 cut(s) 1459
BveI ACCTGC 2 cut(s) 506, 995
Cac8I GCNNGC 4 cut(s) 644, 825, 858, 1049
CaiI CAGNNNCTG 1 cut(s) 637
CfoI GCGC 6 cut(s) 651, 704, 823, 1239, 1297, 1316
Cfr10I RCCGGY 1 cut(s) 1563
Cfr13I GGNCC 5 cut(s) 479, 731, 901, 950, 1257
ClaI ATCGAT 1 cut(s) 80
CseI GACGC 1 cut(s) 618
Csp6I GTAC 5 cut(s) 207, 411, 1008, 1506, 1520
CviAII CATG 5 cut(s) 176, 721, 857, 1011, 1177
CviQI GTAC 5 cut(s) 207, 411, 1008, 1506, 1520
DdeI CTNAG 2 cut(s) 128, 910
DraI TTTAAA 1 cut(s) 160
EaeI YGGCCR 1 cut(s) 1561
EciI GGCGGA 1 cut(s) 638
Eco32I GATATC 1 cut(s) 1398
Eco47I GGWCC 4 cut(s) 479, 731, 901, 950
Eco88I CYCGRG 1 cut(s) 136
EcoO109I RGGNCCY 1 cut(s) 950
EcoRI GAATTC 1 cut(s) 1547
EcoRV GATATC 1 cut(s) 1398
EcoT22I ATGCAT 1 cut(s) 973
FaeI CATG 5 cut(s) 179, 724, 860, 1014, 1180
FaqI GGGAC 2 cut(s) 621, 717
FatI CATG 5 cut(s) 175, 720, 856, 1010, 1176
FauI CCCGC 1 cut(s) 1007
FbaI TGATCA 2 cut(s) 274, 466
FblI GTMKAC 1 cut(s) 522
Fnu4HI GCNGC 5 cut(s) 372, 513, 632, 647, 1304
FokI GGATG 1 cut(s) 1446
Fsp4HI GCNGC 5 cut(s) 372, 513, 632, 647, 1304
FspBI CTAG 3 cut(s) 393, 1044, 1163
GlaI GCGC 6 cut(s) 650, 703, 822, 1238, 1296, 1315
GluI GCNGC 5 cut(s) 372, 513, 632, 647, 1304
GsaI CCCAGC 1 cut(s) 1154
GsuI CTGGAG 1 cut(s) 1319
HaeIII GGCC 4 cut(s) 441, 917, 1258, 1563
HapII CCGG 6 cut(s) 582, 934, 996, 1028, 1193, 1564
HgaI GACGC 1 cut(s) 618
HhaI GCGC 6 cut(s) 651, 704, 823, 1239, 1297, 1316
Hin1II CATG 5 cut(s) 179, 724, 860, 1014, 1180
Hin6I GCGC 6 cut(s) 649, 702, 821, 1237, 1295, 1314
HinP1I GCGC 6 cut(s) 649, 702, 821, 1237, 1295, 1314
HindIII AAGCTT 2 cut(s) 907, 920
HinfI GANTC 9 cut(s) 71, 77, 109, 132, 678, 1166, 1196, 1450, 1496
HpaII CCGG 6 cut(s) 582, 934, 996, 1028, 1193, 1564
HphI GGTGA 3 cut(s) 461, 1139, 1280
Hpy166II GTNNAC 4 cut(s) 260, 523, 712, 1445
Hpy188III TCNNGA 8 cut(s) 138, 305, 329, 1028, 1119, 1163, 1391, 1493
Hpy8I GTNNAC 4 cut(s) 260, 523, 712, 1445
Hpy99I CGWCG 1 cut(s) 348
HpyAV CCTTC 3 cut(s) 96, 470, 598
HpyCH4III ACNGT 6 cut(s) 57, 93, 216, 497, 562, 639
HpyCH4IV ACGT 1 cut(s) 229
HpyCH4V TGCA 8 cut(s) 260, 515, 631, 810, 827, 971, 1225, 1306
HpyF10VI GCNNNNNNNGC 4 cut(s) 320, 648, 1151, 1303
HpyF3I CTNAG 2 cut(s) 128, 910
HpySE526I ACGT 1 cut(s) 229
Hsp92II CATG 5 cut(s) 179, 724, 860, 1014, 1180
HspAI GCGC 6 cut(s) 649, 702, 821, 1237, 1295, 1314
Kpn2I TCCGGA 1 cut(s) 1027
KpnI GGTACC 1 cut(s) 414
Ksp22I TGATCA 2 cut(s) 274, 466
LmnI GCTCC 2 cut(s) 789, 1300
Lsp1109I GCAGC 5 cut(s) 383, 499, 633, 643, 1290
LweI GCATC 2 cut(s) 819, 1309
MaeI CTAG 3 cut(s) 393, 1044, 1163
MaeII ACGT 1 cut(s) 229
MaeIII GTNAC 4 cut(s) 225, 396, 550, 884
MboII GAAGA 7 cut(s) 104, 118, 226, 262, 294, 344, 1063
MflI RGATCY 3 cut(s) 171, 775, 1247
MhlI GDGCHC 2 cut(s) 262, 576
MlyI GAGTC 2 cut(s) 1160, 1444
MmeI TCCRAC 1 cut(s) 76
MnlI CCTC 8 cut(s) 96, 551, 619, 768, 907, 963, 1270, 1329
Mph1103I ATGCAT 1 cut(s) 973
MroI TCCGGA 1 cut(s) 1027
MseI TTAA 9 cut(s) 47, 159, 168, 435, 501, 662, 852, 974, 1413
MslI CAYNNNNRTG 2 cut(s) 815, 1135
MspA1I CMGCKG 2 cut(s) 646, 1154
MspI CCGG 6 cut(s) 582, 934, 996, 1028, 1193, 1564
MspR9I CCNGG 2 cut(s) 582, 997
MssI GTTTAAAC 1 cut(s) 160
MvnI CGCG 4 cut(s) 154, 359, 612, 823
MwoI GCNNNNNNNGC 4 cut(s) 320, 648, 1151, 1303
NciI CCSGG 2 cut(s) 582, 997
NlaIII CATG 5 cut(s) 179, 724, 860, 1014, 1180
NlaIV GGNNCC 5 cut(s) 412, 733, 791, 951, 1249
NmuCI GTSAC 2 cut(s) 225, 884
NsiI ATGCAT 1 cut(s) 973
NspI RCATGY 3 cut(s) 724, 860, 1014
NspV TTCGAA 2 cut(s) 1095, 1551
PaeI GCATGC 1 cut(s) 860
PaqCI CACCTGC 1 cut(s) 506
PciI ACATGT 1 cut(s) 720
PcsI WCGNNNNNNNCGW 1 cut(s) 97
PfeI GAWTC 7 cut(s) 71, 77, 109, 132, 678, 1196, 1496
PkrI GCNGC 5 cut(s) 373, 514, 633, 648, 1305
PleI GAGTC 2 cut(s) 1160, 1444
PmeI GTTTAAAC 1 cut(s) 160
PpsI GAGTC 2 cut(s) 1160, 1444
PpuMI RGGWCCY 1 cut(s) 950
PscI ACATGT 1 cut(s) 720
PshBI ATTAAT 3 cut(s) 501, 974, 1413
Psp5II RGGWCCY 1 cut(s) 950
PspFI CCCAGC 1 cut(s) 1150
PspN4I GGNNCC 5 cut(s) 412, 733, 791, 951, 1249
PspPI GGNCC 5 cut(s) 479, 731, 901, 950, 1257
PspPPI RGGWCCY 1 cut(s) 950
PstI CTGCAG 2 cut(s) 517, 1308
PstNI CAGNNNCTG 1 cut(s) 637
PsuI RGATCY 3 cut(s) 171, 775, 1247
PvuII CAGCTG 2 cut(s) 646, 1154
RsaI GTAC 5 cut(s) 208, 412, 1009, 1507, 1521
RsaNI GTAC 5 cut(s) 207, 411, 1008, 1506, 1520
RseI CAYNNNNRTG 2 cut(s) 815, 1135
SaqAI TTAA 9 cut(s) 47, 159, 168, 435, 501, 662, 852, 974, 1413
SatI GCNGC 5 cut(s) 372, 513, 632, 647, 1304
Sau96I GGNCC 5 cut(s) 479, 731, 901, 950, 1257
ScaI AGTACT 2 cut(s) 1507, 1521
SchI GAGTC 2 cut(s) 1160, 1444
ScrFI CCNGG 2 cut(s) 582, 997
SduI GDGCHC 2 cut(s) 262, 576
SfaNI GCATC 2 cut(s) 819, 1309
SfcI CTRYAG 4 cut(s) 291, 513, 1242, 1304
SfuI TTCGAA 2 cut(s) 1095, 1551
SinI GGWCC 4 cut(s) 479, 731, 901, 950
SmiMI CAYNNNNRTG 2 cut(s) 815, 1135
SmlI CTYRAG 1 cut(s) 1286
SmoI CTYRAG 1 cut(s) 1286
SphI GCATGC 1 cut(s) 860
SsiI CCGC 6 cut(s) 154, 210, 359, 408, 623, 1014
SspI AATATT 2 cut(s) 1115, 1556
SspMI CTAG 3 cut(s) 393, 1044, 1163
StyD4I CCNGG 2 cut(s) 580, 995
TaaI ACNGT 6 cut(s) 57, 93, 216, 497, 562, 639
TaiI ACGT 1 cut(s) 232
TaqI TCGA 5 cut(s) 80, 304, 570, 1095, 1551
TatI WGTACW 2 cut(s) 1505, 1519
TfiI GAWTC 7 cut(s) 71, 77, 109, 132, 678, 1196, 1496
Tru1I TTAA 9 cut(s) 47, 159, 168, 435, 501, 662, 852, 974, 1413
Tru9I TTAA 9 cut(s) 47, 159, 168, 435, 501, 662, 852, 974, 1413
TseFI GTSAC 2 cut(s) 225, 884
TseI GCWGC 5 cut(s) 371, 512, 631, 646, 1303
Tsp45I GTSAC 2 cut(s) 225, 884
TspDTI ATGAA 4 cut(s) 17, 258, 324, 1188
TspGWI ACGGA 4 cut(s) 768, 979, 1070, 1462
VneI GTGCAC 1 cut(s) 258
VpaK11BI GGWCC 4 cut(s) 479, 731, 901, 950
VspI ATTAAT 3 cut(s) 501, 974, 1413
XapI RAATTY 2 cut(s) 1208, 1547
XbaI TCTAGA 1 cut(s) 1162
XceI RCATGY 3 cut(s) 724, 860, 1014
XmiI GTMKAC 1 cut(s) 522
XspI CTAG 3 cut(s) 393, 1044, 1163
ZrmI AGTACT 2 cut(s) 1507, 1521
Zsp2I ATGCAT 1 cut(s) 973
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.