pycom05g02810

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0004806
Physical Location & Seq
Reverse (-)
3297435 .. 3299381
1947 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1875 bp
ATGTGCACTCTTGTTTTCAGATCCTTACCATGTAAGTCTCTCTCCCAGTATAGAGGTGAATTGGCCATTCTAATCTTCAATCCTTCACAGCTTCCAAATGTGGATCGTAGCCATTTTATTAGAGCCATGTCATCGTTGTCTCCGACATCGTCATCAGTTGCAACTCCATCCCATAAGCACATTGCCCAGCTTTTATTAGACCAAAAATCAGCAGCCCAAGCCCTCGAAACCTTCAAATGGGCCTCCAAACTCCCCAAGTTCACACATTCTCCCTCCACTTACCGAGCTCTCATCCACAAGCTGTGCACCTTCCACCGCTTTGACACCGTTCACCAACTGCTTGATGAAATGCCCACATCAATTGGACAACCCCCGGATGAAGACATCTTTGTCACCATCATTCGAGGTCTTGGCCGTGCCCACATGGTAAAACAAGTGATCAAAGTGCTTGACTTGGTTTACAAGTATGACCAGAAACCTTCTTTGAAGATGATGGAAGGTGGCATTGAAGGCGATGGTTATACTTTTGGTATCTTGATGAAAGGACTTTGCCTGACAAACCGAATTGGTGATGGTTTTAAGCTTTTGCAAGCAATGAAGACTCGGGGAATCACCCCAAATACTGTGATATATAACACGTTGCTTCATGCACTTGGCAAGAACAAGAAAGTTGGTAGAGCGAGAAGCTTGATGAATGAGATGGAAGCACCGAATGATGTGACTTTTAATATTTTGATATCTGGGTATTGTGGAGAAGAGAATTTAGTGCAAGCTCTTGTTCTGCTAGAGAAGTGCTTTGGTTTGGGGTTTGTGCCTGATGTTGTCACTGTAACTAAGGTGTTGGAAATTCTTTGCAACAATGGCCGTGTAATGGAAGCTCTCAAGGTTATAGAGAGAGTGGAGAGCAAGGGAGGACTGGTGGATGTGGTAGCTTATAACACCTTGGTCAAGGGCTTTTGTAGATTAGGGAAAGCGAAACTCAGTCTTCGCATTGTGGAGGAAATGGAGAAAAAGGGATGCCTTCCAAATGTTGATACTTACAATGTCTTGATCTCTTGTTTTTGCGAGTCTGGGATGTTGGATATGGCTCTGGATCTGTTTAAGGATATGGAAACAGATGGTATCTACTGGAATTTTGTTACGTACGATACATTAATTAGAAGTTTGTGTGGAGCAGGAAGGACGGAAAAAGGGTTTGAAATTTTGGAACTAATGAATGAGAGAAAACACGGTTCTAGGTGCCAAATCTCTCCTTATAATAGTGTGTTATACGGGTTGTATAAGGAAAATCGTTTAGGCGAAGCACTTGAGTTTTTAACCAGTTTGGGGAAATTATTTCCCAGAGCTGTTGATAAAAGCTTGAAAATCTTAGGTTTCTGTGAAGAGGGCGCCACATTGATTGCAAAGAAAGTTTATGATCAGATGATTACAGAAAATGGAGTTCCAAGTGCTATAATCTTCGACTGTCTAATCCATAGATTTTGCCAAGAAGGCTCTGTTCGCGAAGCATTTGACCTAATGAACGAGATGATTGGTCATGGTTACTTTCCTCTTGCATCGACATTTAATCCTCTGATCAATGCGTTTTGTGACAAAGGGAAAGTTGGTAGTGCACTGAAACTTGTGGAGGACATGGTTGAGAGAGGTTGCTCACCAGATGGTGGAAGTTATGGTCCGTTGGTAGCTGTTCTTTGCCGGATGGGGGATTTTCAGAAGGCTTTGAGACTGGTTTTGCAGATGGTAGAAAGGGGCATCGTTCCAGATTACTTTACATGGAACTCGTTGCTTCTTTGTTTAAGTGAAGAGACTGTATGGTTGAAGGGAAGAAGTGTAATCGATGTAAATAGCTTGCTACACTATATTATTGACAATTAA

Protein Analysis

625

Amino Acids

69.67

Weight (kDa)

7.75

Isoelectric Point (pI)

30.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 164 - 221 9.9e-06 Pentatricopeptide repeat domain
PPR_3 PF13812 194 - 250 2.3e-07 Pentatricopeptide repeat domain
PPR_1 PF12854 202 - 235 2.5e-07 PPR repeat
PPR_2 PF13041 206 - 250 1e-12 PPR repeat family
PPR_1 PF12854 237 - 264 2.9e-06 PPR repeat
PPR_2 PF13041 237 - 278 7.6e-06 PPR repeat family
PPR_long PF17177 292 - 405 1e-07 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 304 - 336 6.4e-07 PPR repeat
PPR_3 PF13812 307 - 354 4.1e-13 Pentatricopeptide repeat domain
PPR_2 PF13041 308 - 355 3.6e-16 PPR repeat family
PPR PF01535 310 - 340 3.2e-06 PPR repeat
PPR_1 PF12854 338 - 371 4.1e-11 PPR repeat
PPR_2 PF13041 342 - 390 2.1e-14 PPR repeat family
PPR PF01535 346 - 375 4e-09 PPR repeat
PPR_1 PF12854 481 - 510 2.5e-07 PPR repeat
PPR_1 PF12854 514 - 546 2.5e-07 PPR repeat
PPR_2 PF13041 520 - 566 1.5e-10 PPR repeat family
PPR PF01535 520 - 550 6.3e-06 PPR repeat
PPR_2 PF13041 557 - 599 7.6e-07 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 936, 1257
AasI GACNNNNNNGTC 1 cut(s) 389
AccB1I GGYRCC 2 cut(s) 1239, 1388
AccB7I CCANNNNNTGG 1 cut(s) 1661
AccII CGCG 1 cut(s) 1503
AciI CCGC 1 cut(s) 316
AclWI GGATC 3 cut(s) 15, 111, 1101
AcoI YGGCCR 3 cut(s) 63, 412, 862
AcsI RAATTY 4 cut(s) 760, 846, 1132, 1200
AcyI GRCGYC 1 cut(s) 1389
AfaI GTAC 1 cut(s) 1145
AfiI CCNNNNNNNGG 5 cut(s) 237, 871, 1326, 1661, 1702
AflIII ACRYGT 1 cut(s) 636
AgsI TTSAA 7 cut(s) 79, 235, 487, 509, 1199, 1363, 1819
Alw21I GWGCWC 4 cut(s) 8, 289, 308, 1615
Alw26I GTCTC 4 cut(s) 42, 144, 1717, 1799
Alw44I GTGCAC 3 cut(s) 4, 304, 1611
AlwI GGATC 3 cut(s) 15, 111, 1101
Ama87I CYCGRG 1 cut(s) 603
AoxI GGCC 4 cut(s) 63, 240, 412, 862
ApaLI GTGCAC 3 cut(s) 4, 304, 1611
ApeKI GCWGC 1 cut(s) 212
ApoI RAATTY 4 cut(s) 760, 846, 1132, 1200
AseI ATTAAT 1 cut(s) 1154
AspLEI GCGC 1 cut(s) 1391
AspS9I GGNCC 2 cut(s) 240, 1673
AsuC2I CCSGG 1 cut(s) 374
AsuHPI GGTGA 6 cut(s) 68, 323, 385, 581, 604, 1644
AvaI CYCGRG 1 cut(s) 603
AvaII GGWCC 1 cut(s) 1673
BaeGI GKGCMC 4 cut(s) 8, 308, 421, 1615
BalI TGGCCA 1 cut(s) 65
BanI GGYRCC 2 cut(s) 1239, 1388
BanII GRGCYC 1 cut(s) 289
BbsI GAAGAC 3 cut(s) 387, 605, 977
Bbv12I GWGCWC 4 cut(s) 8, 289, 308, 1615
BbvI GCAGC 1 cut(s) 224
BceAI ACGGC 2 cut(s) 399, 849
BclI TGATCA 3 cut(s) 438, 1417, 1575
BcnI CCSGG 1 cut(s) 374
BcoDI GTCTC 4 cut(s) 42, 144, 1717, 1799
BfaI CTAG 2 cut(s) 785, 1236
BfoI RGCGCY 1 cut(s) 1392
BglI GCCNNNNNGGC 1 cut(s) 1491
BisI GCNGC 1 cut(s) 213
BlsI GCNGC 1 cut(s) 214
Bme1390I CCNGG 1 cut(s) 374
Bme18I GGWCC 1 cut(s) 1673
BmeT110I CYCGRG 1 cut(s) 603
BmgT120I GGNCC 2 cut(s) 240, 1673
BmiI GGNNCC 2 cut(s) 1241, 1390
BmrFI CCNGG 1 cut(s) 374
BmrI ACTGGG 1 cut(s) 40
BmsI GCATC 3 cut(s) 1007, 1565, 1761
BmuI ACTGGG 1 cut(s) 40
BpiI GAAGAC 3 cut(s) 387, 605, 977
BpuEI CTTGAG 2 cut(s) 866, 1328
BpuMI CCSGG 1 cut(s) 374
Bsa29I ATCGAT 1 cut(s) 1836
BsaAI YACGTR 1 cut(s) 1143
BsaHI GRCGYC 1 cut(s) 1389
BsaJI CCNNGG 2 cut(s) 372, 942
BsaXI ACNNNNNCTCC 4 cut(s) 253, 283, 903, 933
Bsc4I CCNNNNNNNGG 5 cut(s) 237, 871, 1326, 1661, 1702
Bse1I ACTGG 5 cut(s) 46, 921, 1133, 1320, 1731
Bse3DI GCAATG 2 cut(s) 180, 600
BseCI ATCGAT 1 cut(s) 1836
BseDI CCNNGG 2 cut(s) 372, 942
BseGI GGATG 7 cut(s) 167, 291, 382, 928, 1022, 1080, 1704
BseLI CCNNNNNNNGG 5 cut(s) 237, 871, 1326, 1661, 1702
BseMI GCAATG 2 cut(s) 180, 600
BseMII CTCAG 1 cut(s) 994
BseNI ACTGG 5 cut(s) 46, 921, 1133, 1320, 1731
BseSI GKGCMC 4 cut(s) 8, 308, 421, 1615
BseXI GCAGC 1 cut(s) 224
BseYI CCCAGC 1 cut(s) 186
Bsh1236I CGCG 1 cut(s) 1503
BshFI GGCC 4 cut(s) 65, 242, 414, 864
BshNI GGYRCC 2 cut(s) 1239, 1388
BshVI ATCGAT 1 cut(s) 1836
BsiHKAI GWGCWC 4 cut(s) 8, 289, 308, 1615
BsiHKCI CYCGRG 1 cut(s) 603
BsiSI CCGG 2 cut(s) 374, 1696
BsiWI CGTACG 1 cut(s) 1143
BslI CCNNNNNNNGG 5 cut(s) 237, 871, 1326, 1661, 1702
BsmAI GTCTC 4 cut(s) 42, 144, 1717, 1799
BsnI GGCC 4 cut(s) 65, 242, 414, 864
BsoBI CYCGRG 1 cut(s) 603
Bsp1286I GDGCHC 5 cut(s) 8, 289, 308, 421, 1615
Bsp143I GATC 7 cut(s) 20, 103, 438, 1050, 1093, 1417, 1575
Bsp68I TCGCGA 1 cut(s) 1503
BspACI CCGC 1 cut(s) 316
BspANI GGCC 4 cut(s) 65, 242, 414, 864
BspCNI CTCAG 1 cut(s) 993
BspDI ATCGAT 1 cut(s) 1836
BspFNI CGCG 1 cut(s) 1503
BspLI GGNNCC 2 cut(s) 1241, 1390
BspPI GGATC 3 cut(s) 15, 111, 1101
BspT107I GGYRCC 2 cut(s) 1239, 1388
BsrDI GCAATG 2 cut(s) 180, 600
BsrI ACTGG 5 cut(s) 46, 921, 1133, 1320, 1731
BssECI CCNNGG 2 cut(s) 372, 942
BssMI GATC 7 cut(s) 20, 103, 438, 1050, 1093, 1417, 1575
BssNI GRCGYC 1 cut(s) 1389
BssT1I CCWWGG 1 cut(s) 942
Bst4CI ACNGT 6 cut(s) 328, 625, 829, 1232, 1466, 1810
Bst6I CTCTTC 3 cut(s) 750, 1377, 1797
BstACI GRCGYC 1 cut(s) 1389
BstBAI YACGTR 1 cut(s) 1143
BstC8I GCNNGC 3 cut(s) 591, 771, 1850
BstDEI CTNAG 3 cut(s) 834, 980, 1369
BstF5I GGATG 7 cut(s) 167, 291, 382, 928, 1022, 1080, 1704
BstFNI CGCG 1 cut(s) 1503
BstH2I RGCGCY 1 cut(s) 1392
BstHHI GCGC 1 cut(s) 1391
BstKTI GATC 7 cut(s) 23, 106, 441, 1053, 1096, 1420, 1578
BstMAI GTCTC 4 cut(s) 42, 144, 1717, 1799
BstMBI GATC 7 cut(s) 20, 103, 438, 1050, 1093, 1417, 1575
BstMWI GCNNNNNNNGC 5 cut(s) 218, 510, 861, 1491, 1500
BstSCI CCNGG 1 cut(s) 372
BstSLI GKGCMC 4 cut(s) 8, 308, 421, 1615
BstSNI TACGTA 1 cut(s) 1143
BstUI CGCG 1 cut(s) 1503
BstV1I GCAGC 1 cut(s) 224
BstV2I GAAGAC 3 cut(s) 387, 605, 977
BstX2I RGATCY 2 cut(s) 20, 1093
BstYI RGATCY 2 cut(s) 20, 1093
Bsu15I ATCGAT 1 cut(s) 1836
BsuRI GGCC 4 cut(s) 65, 242, 414, 864
BsuTUI ATCGAT 1 cut(s) 1836
BtgZI GCGATG 1 cut(s) 528
BtsCI GGATG 7 cut(s) 167, 291, 382, 928, 1022, 1080, 1704
BtsIMutI CAGTG 2 cut(s) 825, 1613
BtuMI TCGCGA 1 cut(s) 1503
Cac8I GCNNGC 3 cut(s) 591, 771, 1850
CfoI GCGC 1 cut(s) 1391
Cfr13I GGNCC 2 cut(s) 240, 1673
ClaI ATCGAT 1 cut(s) 1836
Csp6I GTAC 1 cut(s) 1144
CspCI CAANNNNNGTGG 4 cut(s) 343, 378, 1381, 1416
CviAII CATG 7 cut(s) 30, 127, 424, 647, 1538, 1633, 1773
CviQI GTAC 1 cut(s) 1144
DdeI CTNAG 3 cut(s) 834, 980, 1369
DinI GGCGCC 1 cut(s) 1390
DpnI GATC 7 cut(s) 22, 105, 440, 1052, 1095, 1419, 1577
DpnII GATC 7 cut(s) 20, 103, 438, 1050, 1093, 1417, 1575
DrdI GACNNNNNNGTC 1 cut(s) 389
DseDI GACNNNNNNGTC 1 cut(s) 389
EaeI YGGCCR 3 cut(s) 63, 412, 862
Eam1104I CTCTTC 3 cut(s) 750, 1377, 1797
EarI CTCTTC 3 cut(s) 750, 1377, 1797
Ecl136II GAGCTC 1 cut(s) 287
Eco105I TACGTA 1 cut(s) 1143
Eco130I CCWWGG 1 cut(s) 942
Eco24I GRGCYC 1 cut(s) 289
Eco32I GATATC 1 cut(s) 738
Eco47I GGWCC 1 cut(s) 1673
Eco53kI GAGCTC 1 cut(s) 287
Eco88I CYCGRG 1 cut(s) 603
EcoICRI GAGCTC 1 cut(s) 287
EcoRV GATATC 1 cut(s) 738
EcoT14I CCWWGG 1 cut(s) 942
EcoT38I GRGCYC 1 cut(s) 289
EgeI GGCGCC 1 cut(s) 1390
EheI GGCGCC 1 cut(s) 1390
ErhI CCWWGG 1 cut(s) 942
FaeI CATG 7 cut(s) 33, 130, 427, 650, 1541, 1636, 1776
FatI CATG 7 cut(s) 29, 126, 423, 646, 1537, 1632, 1772
FbaI TGATCA 3 cut(s) 438, 1417, 1575
Fnu4HI GCNGC 1 cut(s) 213
FokI GGATG 7 cut(s) 154, 278, 389, 935, 1029, 1087, 1711
FriOI GRGCYC 1 cut(s) 289
Fsp4HI GCNGC 1 cut(s) 213
FspBI CTAG 2 cut(s) 785, 1236
GlaI GCGC 1 cut(s) 1390
GluI GCNGC 1 cut(s) 213
GsaI CCCAGC 1 cut(s) 190
HaeII RGCGCY 1 cut(s) 1392
HaeIII GGCC 4 cut(s) 65, 242, 414, 864
HapII CCGG 2 cut(s) 374, 1696
HhaI GCGC 1 cut(s) 1391
Hin1I GRCGYC 1 cut(s) 1389
Hin1II CATG 7 cut(s) 33, 130, 427, 650, 1541, 1636, 1776
Hin6I GCGC 1 cut(s) 1389
HinP1I GCGC 1 cut(s) 1389
HindIII AAGCTT 3 cut(s) 581, 685, 1357
HinfI GANTC 3 cut(s) 601, 609, 1067
HpaII CCGG 2 cut(s) 374, 1696
HphI GGTGA 6 cut(s) 68, 323, 385, 581, 604, 1644
Hpy166II GTNNAC 6 cut(s) 6, 261, 306, 331, 460, 1613
Hpy188I TCNGA 5 cut(s) 20, 144, 1422, 1575, 1713
Hpy188III TCNNGA 5 cut(s) 535, 1048, 1091, 1502, 1760
Hpy8I GTNNAC 6 cut(s) 6, 261, 306, 331, 460, 1613
HpyCH4III ACNGT 6 cut(s) 328, 625, 829, 1232, 1466, 1810
HpyCH4IV ACGT 2 cut(s) 638, 1142
HpyF10VI GCNNNNNNNGC 5 cut(s) 218, 510, 861, 1491, 1500
HpyF3I CTNAG 3 cut(s) 834, 980, 1369
HpySE526I ACGT 2 cut(s) 638, 1142
Hsp92I GRCGYC 1 cut(s) 1389
Hsp92II CATG 7 cut(s) 33, 130, 427, 650, 1541, 1636, 1776
HspAI GCGC 1 cut(s) 1389
KasI GGCGCC 1 cut(s) 1388
Ksp22I TGATCA 3 cut(s) 438, 1417, 1575
Kzo9I GATC 7 cut(s) 20, 103, 438, 1050, 1093, 1417, 1575
LmnI GCTCC 1 cut(s) 1172
Lsp1109I GCAGC 1 cut(s) 224
LweI GCATC 3 cut(s) 1007, 1565, 1761
MaeI CTAG 2 cut(s) 785, 1236
MaeII ACGT 2 cut(s) 638, 1142
MaeIII GTNAC 7 cut(s) 391, 718, 823, 829, 1138, 1541, 1589
MalI GATC 7 cut(s) 22, 105, 440, 1052, 1095, 1419, 1577
MboI GATC 7 cut(s) 20, 103, 438, 1050, 1093, 1417, 1575
MfeI CAATTG 1 cut(s) 360
MflI RGATCY 2 cut(s) 20, 1093
MhlI GDGCHC 5 cut(s) 8, 289, 308, 421, 1615
MlsI TGGCCA 1 cut(s) 65
MluNI TGGCCA 1 cut(s) 65
Mly113I GGCGCC 1 cut(s) 1389
MlyI GAGTC 2 cut(s) 595, 1076
MmeI TCCRAC 3 cut(s) 167, 822, 1059
Mox20I TGGCCA 1 cut(s) 65
MscI TGGCCA 1 cut(s) 65
MseI TTAA 8 cut(s) 579, 726, 1101, 1154, 1316, 1566, 1796, 1873
Msp20I TGGCCA 1 cut(s) 65
MspI CCGG 2 cut(s) 374, 1696
MspR9I CCNGG 1 cut(s) 374
MunI CAATTG 1 cut(s) 360
MvnI CGCG 1 cut(s) 1503
MwoI GCNNNNNNNGC 5 cut(s) 218, 510, 861, 1491, 1500
NarI GGCGCC 1 cut(s) 1389
NciI CCSGG 1 cut(s) 374
NdeII GATC 7 cut(s) 20, 103, 438, 1050, 1093, 1417, 1575
NlaIII CATG 7 cut(s) 33, 130, 427, 650, 1541, 1636, 1776
NlaIV GGNNCC 2 cut(s) 1241, 1390
NmuCI GTSAC 4 cut(s) 391, 718, 823, 1589
NruI TCGCGA 1 cut(s) 1503
PcsI WCGNNNNNNNCGW 1 cut(s) 140
PfeI GAWTC 1 cut(s) 609
Pfl23II CGTACG 1 cut(s) 1143
PflFI GACNNNGTC 1 cut(s) 148
PflMI CCANNNNNTGG 1 cut(s) 1661
PkrI GCNGC 1 cut(s) 214
PleI GAGTC 2 cut(s) 595, 1075
PluTI GGCGCC 1 cut(s) 1392
PpsI GAGTC 2 cut(s) 595, 1075
Ppu21I YACGTR 1 cut(s) 1143
PshBI ATTAAT 1 cut(s) 1154
PsiI TTATAA 2 cut(s) 936, 1257
Psp124BI GAGCTC 1 cut(s) 289
PspFI CCCAGC 1 cut(s) 186
PspLI CGTACG 1 cut(s) 1143
PspN4I GGNNCC 2 cut(s) 1241, 1390
PspPI GGNCC 2 cut(s) 240, 1673
PsuI RGATCY 2 cut(s) 20, 1093
PsyI GACNNNGTC 1 cut(s) 148
RruI TCGCGA 1 cut(s) 1503
RsaI GTAC 1 cut(s) 1145
RsaNI GTAC 1 cut(s) 1144
SacI GAGCTC 1 cut(s) 289
SaqAI TTAA 8 cut(s) 579, 726, 1101, 1154, 1316, 1566, 1796, 1873
SatI GCNGC 1 cut(s) 213
Sau3AI GATC 7 cut(s) 20, 103, 438, 1050, 1093, 1417, 1575
Sau96I GGNCC 2 cut(s) 240, 1673
SchI GAGTC 2 cut(s) 595, 1076
ScrFI CCNGG 1 cut(s) 374
SduI GDGCHC 5 cut(s) 8, 289, 308, 421, 1615
SfaNI GCATC 3 cut(s) 1007, 1565, 1761
SfoI GGCGCC 1 cut(s) 1390
SinI GGWCC 1 cut(s) 1673
SmlI CTYRAG 2 cut(s) 881, 1307
SmoI CTYRAG 2 cut(s) 881, 1307
SnaBI TACGTA 1 cut(s) 1143
SsiI CCGC 1 cut(s) 316
SspDI GGCGCC 1 cut(s) 1388
SspI AATATT 1 cut(s) 730
SspMI CTAG 2 cut(s) 785, 1236
SstI GAGCTC 1 cut(s) 289
StyD4I CCNGG 1 cut(s) 372
StyI CCWWGG 1 cut(s) 942
TaaI ACNGT 6 cut(s) 328, 625, 829, 1232, 1466, 1810
TaiI ACGT 2 cut(s) 641, 1145
TaqI TCGA 5 cut(s) 225, 403, 1461, 1559, 1836
TfiI GAWTC 1 cut(s) 609
Tru1I TTAA 8 cut(s) 579, 726, 1101, 1154, 1316, 1566, 1796, 1873
Tru9I TTAA 8 cut(s) 579, 726, 1101, 1154, 1316, 1566, 1796, 1873
TscAI CASTG 2 cut(s) 832, 1620
TseFI GTSAC 4 cut(s) 391, 718, 823, 1589
TseI GCWGC 1 cut(s) 212
Tsp45I GTSAC 4 cut(s) 391, 718, 823, 1589
TspDTI ATGAA 8 cut(s) 360, 393, 554, 611, 635, 707, 1229, 1535
TspGWI ACGGA 2 cut(s) 1199, 1665
TspRI CASTG 2 cut(s) 832, 1620
Tth111I GACNNNGTC 1 cut(s) 148
Van91I CCANNNNNTGG 1 cut(s) 1661
VneI GTGCAC 3 cut(s) 4, 304, 1611
VpaK11BI GGWCC 1 cut(s) 1673
VspI ATTAAT 1 cut(s) 1154
XapI RAATTY 4 cut(s) 760, 846, 1132, 1200
XspI CTAG 2 cut(s) 785, 1236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.