pycom05g13950

BRIGHT, ARID (A/T-rich interaction domain) domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0001717
Physical Location & Seq
Reverse (-)
17469941 .. 17475191
5251 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2580 bp
ATGGTAGTCCTAAATTTGGACAAACCATTTGCAAAGAGAGCAGCGGAAGCAACCGGCAGCCCAAAGCGTCAGATCAACCATCAACAGCAGACCACCAGAGGAAGAAGAAGCACAACGCCGGCACCCACCGCCACTTCACCATCCCTGTCACCAAAAACGGCAACTGGGTTTGAAGAAGGAAAGAAAAATATAGGGAAAAAAATGGAGGATGTAGAGAAAGAGGAGGGAAAAAGGGTTGAGGATGGAGAAAACAAAAGGGGGGCAGATACCCATGTTCCTGCACGTGTTGAAGGGGGAGAAGAACCAAACCCCAAGACCTTTGATGGTGTAGAAATGGAGACCCAGAAGAGCGTTGATGAAAATGGTGTTGAATTGCCTGGTGAAGACATTCCGGGTGTGGTTGATTCGGTTCCCTCTGTCCCTGAGACTCGTGAAGATGCTAACATTGCTAACAAACCATGCAATGAACTAGATTCCCGTAATGAAACTGATAAGGTTGCGAGTAATGTGGATTCTGGTGTGCATTGTGAGAGTGAGGTTTCTGTGAAGATTGTGAGAGAGGAGGGTGGTGGTGTGAAAGGGGAGGCACTGAAGGATGATTTGGGCAGCAAAGTTAACCCGTCTATTGAATTGGGTGCCAGTGGCAAGATTGATAGTCTTGTTGGTGGTGGGTCGCCTCACACTGAGGACCCCATGGAGATTGAAAGGGAAGTTCATGGTGTTGAGGAAGAAAAGGCACTGAAAGATGGGGTGAGCAGTGAGGCCAACCCTTCCAATGAAGCAGATATAAGTTATAAAACTGATGATGTTGCTTGTGAGATGGAGCTTGATATGCCTCATGATAGTGAGGCTGCAATGGAGAAACTTACAGATGAGGCGACCAGCGAGGCCAACCCCTCCAGCGAAACACGTATCAGTGATGAAATTGATAATATTGTTTCTACAATGGAGCTTGGTATGCCTTGTGATAGTGAAGTTGCAGCAGAAAATCTGATAGATGGGGAGAGCAACAAGGGCAAATCCTCCAATGAGCCAGATAGGACTGCTGAAACTGATAATGTTGTTCGTAAGGCGGAGCTTGATACACATGATAGTGAGGTTGAACCAGAGAAACTGAAAGATGGGGTGACCAGTGAGGTCCCCAATTTCATTGCTGAAGATGATAATGCTGCTTGTAAGGTGGAGCCTGGCATGCCTTGTGATAGTGAAGTTGCAACAGAAAAACTGATAGAACAGGTGAGCAGCGAAGTCAATCCCTCCAGTGAACTGCACATCAATGCTGAAGCTGATAATGCTATTTGTAAGGCGGAAACTGATAAAATGTCTCATGATAGTGGGGTTGGTATGAAGAAACTGATAGGTGGGTTGAACATCAAGGCCAACCCCTCTAGTGAACCCCATATCAGTGCTGAAACTGATAATGTTGTTAGTAAGGTGGAGCCTGATATGCCTCGTGATAATCAAGTCGAAGTGGAGACTGAATCTGATGACGATGGTGAGAAAGTAGAGGGACTGAATGGTGGGGTGAGCAACAAAACAAAGTTTTCCTTTCATACTGACATAAACGAGCAACTGCAGAAACCCATATTTTATGTTGGGCGTAAGGTTGGGATGAAGAGCTTAGAACCAAAGAAAACCTTTCTCTTGGATCCAGGTGCTGATGAGGGTGGTGAGTCAGGGACTGAGGAGGAGCAAGCATCATTCACGAAGGAGGTGATAAATTTATATAAAGAGAAGAACTTGGAATTCAAAGCCCCAAAGTTCTACAAAGAGGAATTAAATTTGCTCAAGTTATGGAGAGCTGTGATCAAACTTGGTGGCTACGACAAGGTTACTACGTGCAAGTTGTGGCGGCAGGTTGGAGAATCATTCAATCCCCCAAAAACCTGTACTACTGTCTCTTGGACTTTTCGAAATTTTTATGAGAAGGCATTACTTGAATTTGAAAGGGATAGACTGAATGGTGGTGAACTTCCTCTTCCTGCAGAGCCTACTAGAGTTGAGAATCGGGCTGATGGCGGCCAGACTTTAGGTTCAGGCAGGGCGCTAAGGGATGCTGCAGCTCGTGCCATGCAGGGTTGGCACTCTCACCGCCATCATGGTAATAATGGTGAGGTTGGAGATGCAATTAATAAGGATAAGCACCTGAGTACCATGCCCAAAAGTGACAAACAACTAAAAAATTCTGGTTTGCTAAAGCGGAAAAAGCCATCTCATATGGATTCTGGTATCCAAGTTGCTGACATGAAAGCTACAAAACCACGAATGGATACAGTGGTATTTGATATTGGACCCCCAGCAGATTGGGTAAAGATTAATGTGAAAAGATTTAATGATTGCTTTGAGGTATATGCCTTAGTTCCTGGGCTTCTGCGCGAGGAGGTGCATGTGCAATCTGATCCAGCCGGACGCTTGATTATATCTGGTCAACCAACACAACTGGATAATCCTTGGGGTGTCACACCCTTTAAGAAGGTTGTCAGCCTACCGTCGAGAATTGATCCACATCAGACATCTGCTGTCGTGACCTTGAACGGCCAGTTGTTTGTGCGCGTTCCATTTGAACAGTCAGATTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ARID HSP20

Protein Analysis

860

Amino Acids

93.84

Weight (kDa)

4.85

Isoelectric Point (pI)

46.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARID PF01388 565 - 649 3.2e-18 ARID/BRIGHT DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 795
Acc36I ACCTGC 1 cut(s) 1846
AccB1I GGYRCC 2 cut(s) 121, 635
AccII CGCG 2 cut(s) 2376, 2553
AciI CCGC 8 cut(s) 44, 129, 1073, 1307, 1852, 2019, 2092, 2200
AclWI GGATC 4 cut(s) 1643, 1656, 2393, 2495
AcoI YGGCCR 2 cut(s) 2020, 2536
AcsI RAATTY 7 cut(s) 13, 1720, 1745, 1780, 1915, 1940, 2182
AcuI CTGAAG 3 cut(s) 611, 1176, 1302
AcvI CACGTG 1 cut(s) 284
AfaI GTAC 2 cut(s) 1891, 2152
AfiI CCNNNNNNNGG 1 cut(s) 16
AflIII ACRYGT 2 cut(s) 283, 908
AjnI CCWGG 4 cut(s) 376, 1186, 1651, 2362
AjuI GAANNNNNNNTTGG 2 cut(s) 584, 616
AluBI AGCT 8 cut(s) 826, 952, 1078, 1286, 1620, 1802, 2063, 2252
AluI AGCT 8 cut(s) 826, 952, 1078, 1286, 1620, 1802, 2063, 2252
Alw26I GTCTC 5 cut(s) 332, 419, 1329, 1469, 1903
AlwI GGATC 4 cut(s) 1643, 1656, 2393, 2495
AlwNI CAGNNNCTG 2 cut(s) 1658, 1682
AoxI GGCC 5 cut(s) 762, 888, 1377, 2020, 2536
ApeKI GCWGC 9 cut(s) 41, 57, 606, 851, 980, 1169, 1242, 2057, 2060
ApoI RAATTY 7 cut(s) 13, 1720, 1745, 1780, 1915, 1940, 2182
ArsI GACNNNNNNTTYG 2 cut(s) 11, 43
AseI ATTAAT 2 cut(s) 2130, 2316
Asp700I GAANNNNTTC 1 cut(s) 387
AspLEI GCGC 3 cut(s) 2047, 2376, 2553
AspS9I GGNCC 3 cut(s) 688, 1138, 2291
AsuC2I CCSGG 1 cut(s) 393
AsuII TTCGAA 1 cut(s) 1912
AvaII GGWCC 3 cut(s) 688, 1138, 2291
BaeI ACNNNNGTAYC 6 cut(s) 258, 291, 2134, 2167, 2262, 2295
BamHI GGATCC 1 cut(s) 1648
BanI GGYRCC 2 cut(s) 121, 635
BauI CACGAG 3 cut(s) 429, 1452, 2064
BbrPI CACGTG 1 cut(s) 284
BbsI GAAGAC 1 cut(s) 390
BbvI GCAGC 9 cut(s) 53, 69, 618, 838, 992, 1156, 1254, 2044, 2072
BceAI ACGGC 2 cut(s) 174, 2551
BciT130I CCWGG 4 cut(s) 378, 1188, 1653, 2364
BciVI GTATCC 2 cut(s) 2240, 2263
BclI TGATCA 1 cut(s) 1806
BcnI CCSGG 1 cut(s) 393
BcoDI GTCTC 5 cut(s) 332, 419, 1329, 1469, 1903
BfaI CTAG 3 cut(s) 470, 1389, 1995
BfmI CTRYAG 3 cut(s) 1574, 1983, 2058
BfoI RGCGCY 1 cut(s) 2048
BfuAI ACCTGC 1 cut(s) 1846
BfuI GTATCC 2 cut(s) 2240, 2263
Bme1390I CCNGG 5 cut(s) 378, 393, 1188, 1653, 2364
Bme18I GGWCC 3 cut(s) 688, 1138, 2291
BmgT120I GGNCC 3 cut(s) 688, 1138, 2291
BmiI GGNNCC 9 cut(s) 123, 411, 637, 690, 1140, 1185, 1440, 1650, 2293
BmrFI CCNGG 5 cut(s) 378, 393, 1188, 1653, 2364
BmrI ACTGGG 1 cut(s) 174
BmsI GCATC 4 cut(s) 427, 1706, 2044, 2113
BmuI ACTGGG 1 cut(s) 174
BpiI GAAGAC 1 cut(s) 390
BpmI CTGGAG 2 cut(s) 883, 1243
Bpu10I CCTNAGC 1 cut(s) 2048
Bpu14I TTCGAA 1 cut(s) 1912
BpuEI CTTGAG 1 cut(s) 1772
BpuMI CCSGG 1 cut(s) 393
BsaAI YACGTR 3 cut(s) 284, 911, 1839
BsaBI GATNNNNATC 1 cut(s) 2505
BsaI GGTCTC 1 cut(s) 332
BsaJI CCNNGG 3 cut(s) 693, 2363, 2450
Bsc4I CCNNNNNNNGG 1 cut(s) 16
Bse118I RCCGGY 2 cut(s) 53, 118
Bse1I ACTGG 6 cut(s) 169, 639, 1131, 1260, 2445, 2539
Bse3DI GCAATG 4 cut(s) 444, 469, 861, 1149
Bse8I GATNNNNATC 1 cut(s) 2505
BseBI CCWGG 4 cut(s) 378, 1188, 1653, 2364
BseDI CCNNGG 3 cut(s) 693, 2363, 2450
BseGI GGATG 6 cut(s) 140, 214, 247, 601, 1617, 2059
BseJI GATNNNNATC 1 cut(s) 2505
BseLI CCNNNNNNNGG 1 cut(s) 16
BseMI GCAATG 4 cut(s) 444, 469, 861, 1149
BseMII CTCAG 4 cut(s) 414, 675, 1674, 2138
BseNI ACTGG 6 cut(s) 169, 639, 1131, 1260, 2445, 2539
BseRI GAGGAG 5 cut(s) 236, 575, 1700, 1703, 2393
BseXI GCAGC 9 cut(s) 53, 69, 618, 838, 992, 1156, 1254, 2044, 2072
BseYI CCCAGC 1 cut(s) 2296
BsgI GTGCAG 2 cut(s) 264, 1253
Bsh1236I CGCG 2 cut(s) 2376, 2553
BshFI GGCC 5 cut(s) 764, 890, 1379, 2022, 2538
BshNI GGYRCC 2 cut(s) 121, 635
BsiSI CCGG 4 cut(s) 54, 119, 392, 2406
BslFI GGGAC 4 cut(s) 404, 1124, 1524, 1693
BslI CCNNNNNNNGG 1 cut(s) 16
BsmAI GTCTC 5 cut(s) 332, 419, 1329, 1469, 1903
BsmFI GGGAC 4 cut(s) 404, 1124, 1524, 1693
BsnI GGCC 5 cut(s) 764, 890, 1379, 2022, 2538
Bso31I GGTCTC 1 cut(s) 332
Bsp119I TTCGAA 1 cut(s) 1912
Bsp143I GATC 5 cut(s) 72, 1648, 1806, 2398, 2500
Bsp19I CCATGG 1 cut(s) 693
BspACI CCGC 8 cut(s) 44, 129, 1073, 1307, 1852, 2019, 2092, 2200
BspANI GGCC 5 cut(s) 764, 890, 1379, 2022, 2538
BspCNI CTCAG 4 cut(s) 415, 676, 1675, 2139
BspFNI CGCG 2 cut(s) 2376, 2553
BspHI TCATGA 2 cut(s) 838, 1327
BspLI GGNNCC 9 cut(s) 123, 411, 637, 690, 1140, 1185, 1440, 1650, 2293
BspMAI CTGCAG 3 cut(s) 1578, 1987, 2062
BspMI ACCTGC 1 cut(s) 1846
BspPI GGATC 4 cut(s) 1643, 1656, 2393, 2495
BspQI GCTCTTC 2 cut(s) 341, 1610
BspT104I TTCGAA 1 cut(s) 1912
BspT107I GGYRCC 2 cut(s) 121, 635
BspTNI GGTCTC 1 cut(s) 332
BsrDI GCAATG 4 cut(s) 444, 469, 861, 1149
BsrFI RCCGGY 2 cut(s) 53, 118
BsrI ACTGG 6 cut(s) 169, 639, 1131, 1260, 2445, 2539
BssAI RCCGGY 2 cut(s) 53, 118
BssECI CCNNGG 3 cut(s) 693, 2363, 2450
BssMI GATC 5 cut(s) 72, 1648, 1806, 2398, 2500
BssSI CACGAG 3 cut(s) 429, 1452, 2064
BssT1I CCWWGG 2 cut(s) 693, 2450
Bst2BI CACGAG 3 cut(s) 429, 1452, 2064
Bst2UI CCWGG 4 cut(s) 378, 1188, 1653, 2364
Bst4CI ACNGT 4 cut(s) 1897, 2275, 2490, 2568
Bst6I CTCTTC 3 cut(s) 341, 1610, 1983
BstAPI GCANNNNNTGC 1 cut(s) 2066
BstBAI YACGTR 3 cut(s) 284, 911, 1839
BstBI TTCGAA 1 cut(s) 1912
BstC8I GCNNGC 3 cut(s) 120, 1193, 1695
BstDEI CTNAG 7 cut(s) 423, 684, 1621, 1683, 2048, 2147, 2356
BstDSI CCRYGG 1 cut(s) 693
BstEII GGTNACC 1 cut(s) 1126
BstF5I GGATG 6 cut(s) 140, 214, 247, 601, 1617, 2059
BstFNI CGCG 2 cut(s) 2376, 2553
BstH2I RGCGCY 1 cut(s) 2048
BstHHI GCGC 3 cut(s) 2047, 2376, 2553
BstKTI GATC 5 cut(s) 75, 1651, 1809, 2401, 2503
BstMAI GTCTC 5 cut(s) 332, 419, 1329, 1469, 1903
BstMBI GATC 5 cut(s) 72, 1648, 1806, 2398, 2500
BstNI CCWGG 4 cut(s) 378, 1188, 1653, 2364
BstNSI RCATGY 2 cut(s) 1195, 2390
BstPI GGTNACC 1 cut(s) 1126
BstSCI CCNGG 5 cut(s) 376, 391, 1186, 1651, 2362
BstSFI CTRYAG 3 cut(s) 1574, 1983, 2058
BstUI CGCG 2 cut(s) 2376, 2553
BstV1I GCAGC 9 cut(s) 53, 69, 618, 838, 992, 1156, 1254, 2044, 2072
BstV2I GAAGAC 1 cut(s) 390
BstX2I RGATCY 1 cut(s) 1648
BstXI CCANNNNNNTGG 1 cut(s) 2304
BstYI RGATCY 1 cut(s) 1648
BsuI GTATCC 2 cut(s) 2240, 2263
BsuRI GGCC 5 cut(s) 764, 890, 1379, 2022, 2538
BtgI CCRYGG 1 cut(s) 693
BtsCI GGATG 6 cut(s) 140, 214, 247, 601, 1617, 2059
BtsI GCAGTG 1 cut(s) 763
BveI ACCTGC 1 cut(s) 1846
Cac8I GCNNGC 3 cut(s) 120, 1193, 1695
CaiI CAGNNNCTG 2 cut(s) 1658, 1682
CciI TCATGA 2 cut(s) 838, 1327
CfoI GCGC 3 cut(s) 2047, 2376, 2553
Cfr10I RCCGGY 2 cut(s) 53, 118
Cfr13I GGNCC 3 cut(s) 688, 1138, 2291
CseI GACGC 2 cut(s) 56, 2418
Csp6I GTAC 2 cut(s) 1890, 2151
CspCI CAANNNNNGTGG 2 cut(s) 1798, 1833
CviQI GTAC 2 cut(s) 1890, 2151
DdeI CTNAG 7 cut(s) 423, 684, 1621, 1683, 2048, 2147, 2356
DpnI GATC 5 cut(s) 74, 1650, 1808, 2400, 2502
DpnII GATC 5 cut(s) 72, 1648, 1806, 2398, 2500
EaeI YGGCCR 2 cut(s) 2020, 2536
Eam1104I CTCTTC 3 cut(s) 341, 1610, 1983
EarI CTCTTC 3 cut(s) 341, 1610, 1983
EciI GGCGGA 2 cut(s) 1088, 1322
Eco130I CCWWGG 2 cut(s) 693, 2450
Eco31I GGTCTC 1 cut(s) 332
Eco47I GGWCC 3 cut(s) 688, 1138, 2291
Eco57I CTGAAG 3 cut(s) 611, 1176, 1302
Eco72I CACGTG 1 cut(s) 284
Eco91I GGTNACC 1 cut(s) 1126
EcoO109I RGGNCCY 2 cut(s) 688, 1138
EcoO65I GGTNACC 1 cut(s) 1126
EcoRI GAATTC 1 cut(s) 1745
EcoRII CCWGG 4 cut(s) 376, 1186, 1651, 2362
EcoT14I CCWWGG 2 cut(s) 693, 2450
ErhI CCWWGG 2 cut(s) 693, 2450
FalI AAGNNNNNCTT 4 cut(s) 1532, 1564, 1622, 1654
FaqI GGGAC 4 cut(s) 404, 1124, 1524, 1693
FauNDI CATATG 1 cut(s) 2217
FbaI TGATCA 1 cut(s) 1806
FokI GGATG 6 cut(s) 127, 221, 254, 608, 1624, 2066
FspBI CTAG 3 cut(s) 470, 1389, 1995
GlaI GCGC 3 cut(s) 2046, 2375, 2552
GsaI CCCAGC 1 cut(s) 2300
GsuI CTGGAG 2 cut(s) 883, 1243
HaeII RGCGCY 1 cut(s) 2048
HaeIII GGCC 5 cut(s) 764, 890, 1379, 2022, 2538
HapII CCGG 4 cut(s) 54, 119, 392, 2406
HgaI GACGC 2 cut(s) 56, 2418
HhaI GCGC 3 cut(s) 2047, 2376, 2553
Hin6I GCGC 3 cut(s) 2045, 2374, 2551
HinP1I GCGC 3 cut(s) 2045, 2374, 2551
HincII GTYRAC 2 cut(s) 616, 2429
HindII GTYRAC 2 cut(s) 616, 2429
HinfI GANTC 9 cut(s) 404, 427, 473, 512, 1481, 1673, 1865, 2005, 2222
HpaI GTTAAC 1 cut(s) 616
HpaII CCGG 4 cut(s) 54, 119, 392, 2406
Hpy166II GTNNAC 5 cut(s) 616, 1265, 1394, 1970, 2429
Hpy188I TCNGA 6 cut(s) 72, 993, 1486, 2398, 2511, 2572
Hpy188III TCNNGA 7 cut(s) 431, 839, 1328, 1454, 1705, 2493, 2524
Hpy8I GTNNAC 5 cut(s) 616, 1265, 1394, 1970, 2429
Hpy99I CGWCG 1 cut(s) 2494
HpyAV CCTTC 7 cut(s) 170, 284, 586, 780, 1702, 1921, 2467
HpyCH4III ACNGT 4 cut(s) 1897, 2275, 2490, 2568
HpyCH4IV ACGT 3 cut(s) 283, 910, 1838
HpyF3I CTNAG 7 cut(s) 423, 684, 1621, 1683, 2048, 2147, 2356
HpySE526I ACGT 3 cut(s) 283, 910, 1838
HspAI GCGC 3 cut(s) 2045, 2374, 2551
KroI GCCGGC 1 cut(s) 118
KroNI GCCGGC 1 cut(s) 120
Ksp22I TGATCA 1 cut(s) 1806
KspAI GTTAAC 1 cut(s) 616
Kzo9I GATC 5 cut(s) 72, 1648, 1806, 2398, 2500
LguI GCTCTTC 2 cut(s) 341, 1610
LmnI GCTCC 6 cut(s) 823, 949, 1075, 1183, 1438, 1690
Lsp1109I GCAGC 9 cut(s) 53, 69, 618, 838, 992, 1156, 1254, 2044, 2072
LweI GCATC 4 cut(s) 427, 1706, 2044, 2113
MaeI CTAG 3 cut(s) 470, 1389, 1995
MaeII ACGT 3 cut(s) 283, 910, 1838
MaeIII GTNAC 6 cut(s) 147, 1126, 1831, 2165, 2458, 2524
MalI GATC 5 cut(s) 74, 1650, 1808, 2400, 2502
MboI GATC 5 cut(s) 72, 1648, 1806, 2398, 2500
MflI RGATCY 1 cut(s) 1648
MlyI GAGTC 2 cut(s) 421, 1682
MmeI TCCRAC 2 cut(s) 1840, 2098
MroNI GCCGGC 1 cut(s) 118
MroXI GAANNNNTTC 1 cut(s) 387
MseI TTAA 6 cut(s) 615, 1778, 2130, 2316, 2331, 2469
MslI CAYNNNNRTG 5 cut(s) 843, 1092, 1275, 1332, 1404
MspA1I CMGCKG 1 cut(s) 44
MspI CCGG 4 cut(s) 54, 119, 392, 2406
MspR9I CCNGG 5 cut(s) 378, 393, 1188, 1653, 2364
MvaI CCWGG 4 cut(s) 378, 1188, 1653, 2364
MvnI CGCG 2 cut(s) 2376, 2553
NaeI GCCGGC 1 cut(s) 120
NciI CCSGG 1 cut(s) 393
NcoI CCATGG 1 cut(s) 693
NdeI CATATG 1 cut(s) 2217
NdeII GATC 5 cut(s) 72, 1648, 1806, 2398, 2500
NgoMIV GCCGGC 1 cut(s) 118
NlaIV GGNNCC 9 cut(s) 123, 411, 637, 690, 1140, 1185, 1440, 1650, 2293
NmuCI GTSAC 5 cut(s) 147, 1126, 2165, 2458, 2524
NspI RCATGY 2 cut(s) 1195, 2390
NspV TTCGAA 1 cut(s) 1912
PaeI GCATGC 1 cut(s) 1195
PagI TCATGA 2 cut(s) 838, 1327
PciSI GCTCTTC 2 cut(s) 341, 1610
PdiI GCCGGC 1 cut(s) 120
PdmI GAANNNNTTC 1 cut(s) 387
PfeI GAWTC 7 cut(s) 404, 473, 512, 1481, 1865, 2005, 2222
PleI GAGTC 2 cut(s) 421, 1681
PmaCI CACGTG 1 cut(s) 284
PmlI CACGTG 1 cut(s) 284
PpsI GAGTC 2 cut(s) 421, 1681
Ppu21I YACGTR 3 cut(s) 284, 911, 1839
PpuMI RGGWCCY 2 cut(s) 688, 1138
PshBI ATTAAT 2 cut(s) 2130, 2316
PsiI TTATAA 1 cut(s) 795
Psp5II RGGWCCY 2 cut(s) 688, 1138
Psp6I CCWGG 4 cut(s) 376, 1186, 1651, 2362
PspCI CACGTG 1 cut(s) 284
PspEI GGTNACC 1 cut(s) 1126
PspFI CCCAGC 1 cut(s) 2296
PspGI CCWGG 4 cut(s) 376, 1186, 1651, 2362
PspN4I GGNNCC 9 cut(s) 123, 411, 637, 690, 1140, 1185, 1440, 1650, 2293
PspPI GGNCC 3 cut(s) 688, 1138, 2291
PspPPI RGGWCCY 2 cut(s) 688, 1138
PstI CTGCAG 3 cut(s) 1578, 1987, 2062
PstNI CAGNNNCTG 2 cut(s) 1658, 1682
PsuI RGATCY 1 cut(s) 1648
RsaI GTAC 2 cut(s) 1891, 2152
RsaNI GTAC 2 cut(s) 1890, 2151
RseI CAYNNNNRTG 5 cut(s) 843, 1092, 1275, 1332, 1404
SapI GCTCTTC 2 cut(s) 341, 1610
SaqAI TTAA 6 cut(s) 615, 1778, 2130, 2316, 2331, 2469
Sau3AI GATC 5 cut(s) 72, 1648, 1806, 2398, 2500
Sau96I GGNCC 3 cut(s) 688, 1138, 2291
SchI GAGTC 2 cut(s) 421, 1682
ScrFI CCNGG 5 cut(s) 378, 393, 1188, 1653, 2364
SfaNI GCATC 4 cut(s) 427, 1706, 2044, 2113
SfcI CTRYAG 3 cut(s) 1574, 1983, 2058
SfuI TTCGAA 1 cut(s) 1912
SinI GGWCC 3 cut(s) 688, 1138, 2291
SmiMI CAYNNNNRTG 5 cut(s) 843, 1092, 1275, 1332, 1404
SmlI CTYRAG 1 cut(s) 1787
SmoI CTYRAG 1 cut(s) 1787
SphI GCATGC 1 cut(s) 1195
SsiI CCGC 8 cut(s) 44, 129, 1073, 1307, 1852, 2019, 2092, 2200
SspI AATATT 1 cut(s) 934
SspMI CTAG 3 cut(s) 470, 1389, 1995
StyD4I CCNGG 5 cut(s) 376, 391, 1186, 1651, 2362
StyI CCWWGG 2 cut(s) 693, 2450
TaaI ACNGT 4 cut(s) 1897, 2275, 2490, 2568
TaiI ACGT 3 cut(s) 286, 913, 1841
TaqI TCGA 3 cut(s) 1467, 1912, 2492
TatI WGTACW 1 cut(s) 1889
TauI GCSGC 2 cut(s) 1855, 2022
TfiI GAWTC 7 cut(s) 404, 473, 512, 1481, 1865, 2005, 2222
Tru1I TTAA 6 cut(s) 615, 1778, 2130, 2316, 2331, 2469
Tru9I TTAA 6 cut(s) 615, 1778, 2130, 2316, 2331, 2469
TseFI GTSAC 5 cut(s) 147, 1126, 2165, 2458, 2524
TseI GCWGC 9 cut(s) 41, 57, 606, 851, 980, 1169, 1242, 2057, 2060
Tsp45I GTSAC 5 cut(s) 147, 1126, 2165, 2458, 2524
VpaK11BI GGWCC 3 cut(s) 688, 1138, 2291
VspI ATTAAT 2 cut(s) 2130, 2316
XapI RAATTY 7 cut(s) 13, 1720, 1745, 1780, 1915, 1940, 2182
XceI RCATGY 2 cut(s) 1195, 2390
XmnI GAANNNNTTC 1 cut(s) 387
XspI CTAG 3 cut(s) 470, 1389, 1995
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.