DUF1087
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G44800 |
| fragaria_vesca | FvH4_3g12610 FvH4_3g12610 FvH4_3g12610 FvH4_3g12610 FvH4_3g12610 FvH4_3g12610 |
| malus_domestica | MD05G1249300.v1.1 MD10G1229800.v1.1 |
| prunus_persica | Prupe.4G114900_v2.0.a1 Prupe.4G114900_v2.0.a1 Prupe.4G114900_v2.0.a1 |
| pyrus_communis | pycom05g22640 pycom10g19330 |
| rosa_chinensis | RchiOBHm_Chr5g0020581 |
| rosa_laevigata | RLG00000032539 |
| rosa_multiflora | Rmu_co8387783.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00057710 |
| rosa_rugosa | Rorug05G0061000 Rorug05G0061100 Rorug05G0061200 Rorug05G0061300 Rorug05G0061400 |
| rosa_samantha | Rh5AG151300 Rh5BG150800 Rh5CG162200 Rh5DG150200 |
| rosa_wichuraiana | Rw5G013390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2006, 3748 |
| AarI | CACCTGC | 1 cut(s) | 1844 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 1078, 1394 |
| Acc36I | ACCTGC | 2 cut(s) | 1201, 1844 |
| Acc65I | GGTACC | 1 cut(s) | 2816 |
| AccB1I | GGYRCC | 2 cut(s) | 2524, 2816 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2203 |
| AccBSI | CCGCTC | 1 cut(s) | 160 |
| AccI | GTMKAC | 1 cut(s) | 3399 |
| AccII | CGCG | 3 cut(s) | 2700, 2802, 3442 |
| AclWI | GGATC | 7 cut(s) | 657, 800, 813, 832, 976, 2600, 3716 |
| AcoI | YGGCCR | 2 cut(s) | 1956, 3363 |
| AcsI | RAATTY | 7 cut(s) | 1348, 1883, 2155, 2611, 2642, 2749, 3371 |
| AcuI | CTGAAG | 5 cut(s) | 69, 105, 2318, 2810, 3234 |
| AfaI | GTAC | 5 cut(s) | 817, 1526, 2122, 2805, 2818 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 682, 1856, 2203, 3209, 3210 |
| AflII | CTTAAG | 2 cut(s) | 290, 3281 |
| AflIII | ACRYGT | 1 cut(s) | 1519 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 700, 3211, 3423 |
| AjnI | CCWGG | 3 cut(s) | 103, 923, 3190 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1221, 1253 |
| Alw21I | GWGCWC | 3 cut(s) | 710, 772, 3589 |
| Alw26I | GTCTC | 4 cut(s) | 380, 1316, 2057, 2108 |
| AlwI | GGATC | 7 cut(s) | 657, 800, 813, 832, 976, 2600, 3716 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 1796, 2167, 3197, 3419, 3527 |
| AoxI | GGCC | 4 cut(s) | 90, 1956, 3363, 3496 |
| ApeKI | GCWGC | 7 cut(s) | 1283, 1382, 1809, 2284, 2869, 3337, 3664 |
| ApoI | RAATTY | 7 cut(s) | 1348, 1883, 2155, 2611, 2642, 2749, 3371 |
| AseI | ATTAAT | 1 cut(s) | 149 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2673 |
| Asp718I | GGTACC | 1 cut(s) | 2816 |
| AspLEI | GCGC | 4 cut(s) | 132, 297, 3442, 3657 |
| AspS9I | GGNCC | 3 cut(s) | 53, 1071, 3377 |
| AsuHPI | GGTGA | 5 cut(s) | 1256, 2056, 2090, 2852, 3727 |
| AvaII | GGWCC | 3 cut(s) | 53, 1071, 3377 |
| AxyI | CCTNAGG | 2 cut(s) | 1113, 2289 |
| BaeGI | GKGCMC | 1 cut(s) | 2527 |
| BalI | TGGCCA | 2 cut(s) | 1958, 3365 |
| BamHI | GGATCC | 1 cut(s) | 805 |
| BanI | GGYRCC | 2 cut(s) | 2524, 2816 |
| BanII | GRGCYC | 2 cut(s) | 710, 772 |
| BbsI | GAAGAC | 1 cut(s) | 116 |
| Bbv12I | GWGCWC | 3 cut(s) | 710, 772, 3589 |
| BbvI | GCAGC | 7 cut(s) | 1270, 1369, 1821, 2296, 2881, 3324, 3676 |
| BceAI | ACGGC | 1 cut(s) | 3418 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1199, 1233, 3114, 3148 |
| BciT130I | CCWGG | 3 cut(s) | 105, 925, 3192 |
| BclI | TGATCA | 2 cut(s) | 58, 3691 |
| BcoDI | GTCTC | 4 cut(s) | 380, 1316, 2057, 2108 |
| BfaI | CTAG | 5 cut(s) | 1841, 2378, 2601, 3341, 3642 |
| BfmI | CTRYAG | 5 cut(s) | 618, 1208, 1647, 1851, 2928 |
| BfrI | CTTAAG | 2 cut(s) | 290, 3281 |
| BfuAI | ACCTGC | 2 cut(s) | 1201, 1844 |
| BglII | AGATCT | 2 cut(s) | 506, 1532 |
| BisI | GCNGC | 8 cut(s) | 1284, 1383, 1810, 2285, 2870, 3338, 3496, 3665 |
| BlpI | GCTNAGC | 1 cut(s) | 1845 |
| BlsI | GCNGC | 8 cut(s) | 1285, 1384, 1811, 2286, 2871, 3339, 3497, 3666 |
| Bme1390I | CCNGG | 3 cut(s) | 105, 925, 3192 |
| Bme18I | GGWCC | 3 cut(s) | 53, 1071, 3377 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 700, 3211, 3423 |
| BmgT120I | GGNCC | 3 cut(s) | 53, 1071, 3377 |
| BmiI | GGNNCC | 9 cut(s) | 807, 1072, 1734, 1833, 2478, 2526, 2706, 2818, 3033 |
| BmrFI | CCNGG | 3 cut(s) | 105, 925, 3192 |
| BmsI | GCATC | 6 cut(s) | 737, 788, 1763, 2885, 3126, 3666 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1296 |
| BpiI | GAAGAC | 1 cut(s) | 116 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 377, 409, 548, 580, 3032, 3064 |
| BpmI | CTGGAG | 2 cut(s) | 87, 254 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1590 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1845 |
| BpuEI | CTTGAG | 2 cut(s) | 794, 3371 |
| Bsa29I | ATCGAT | 1 cut(s) | 3720 |
| BsaI | GGTCTC | 3 cut(s) | 380, 2057, 2108 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 682, 1856, 2203, 3209, 3210 |
| Bse118I | RCCGGY | 1 cut(s) | 2872 |
| Bse1I | ACTGG | 6 cut(s) | 271, 442, 1801, 2139, 2208, 2818 |
| Bse21I | CCTNAGG | 2 cut(s) | 1113, 2289 |
| Bse3DI | GCAATG | 2 cut(s) | 323, 3081 |
| BseBI | CCWGG | 3 cut(s) | 105, 925, 3192 |
| BseCI | ATCGAT | 1 cut(s) | 3720 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 682, 1856, 2203, 3209, 3210 |
| BseMI | GCAATG | 2 cut(s) | 323, 3081 |
| BseNI | ACTGG | 6 cut(s) | 271, 442, 1801, 2139, 2208, 2818 |
| BseRI | GAGGAG | 2 cut(s) | 1118, 1844 |
| BseSI | GKGCMC | 1 cut(s) | 2527 |
| BseXI | GCAGC | 7 cut(s) | 1270, 1369, 1821, 2296, 2881, 3324, 3676 |
| Bsh1236I | CGCG | 3 cut(s) | 2700, 2802, 3442 |
| BshFI | GGCC | 4 cut(s) | 92, 1958, 3365, 3498 |
| BshNI | GGYRCC | 2 cut(s) | 2524, 2816 |
| BshVI | ATCGAT | 1 cut(s) | 3720 |
| BsiHKAI | GWGCWC | 3 cut(s) | 710, 772, 3589 |
| BsiSI | CCGG | 2 cut(s) | 803, 2873 |
| BslFI | GGGAC | 4 cut(s) | 237, 659, 1084, 1882 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 682, 1856, 2203, 3209, 3210 |
| BsmAI | GTCTC | 4 cut(s) | 380, 1316, 2057, 2108 |
| BsmFI | GGGAC | 4 cut(s) | 237, 659, 1084, 1882 |
| BsmI | GAATGC | 2 cut(s) | 297, 3271 |
| BsnI | GGCC | 4 cut(s) | 92, 1958, 3365, 3498 |
| Bso31I | GGTCTC | 3 cut(s) | 380, 2057, 2108 |
| Bsp1286I | GDGCHC | 4 cut(s) | 710, 772, 2527, 3589 |
| Bsp1407I | TGTACA | 1 cut(s) | 1524 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1845 |
| Bsp19I | CCATGG | 2 cut(s) | 1033, 1566 |
| BspANI | GGCC | 4 cut(s) | 92, 1958, 3365, 3498 |
| BspDI | ATCGAT | 1 cut(s) | 3720 |
| BspFNI | CGCG | 3 cut(s) | 2700, 2802, 3442 |
| BspHI | TCATGA | 2 cut(s) | 1717, 3229 |
| BspLI | GGNNCC | 9 cut(s) | 807, 1072, 1734, 1833, 2478, 2526, 2706, 2818, 3033 |
| BspMAI | CTGCAG | 5 cut(s) | 622, 1212, 1651, 1855, 2932 |
| BspMI | ACCTGC | 2 cut(s) | 1201, 1844 |
| BspPI | GGATC | 7 cut(s) | 657, 800, 813, 832, 976, 2600, 3716 |
| BspQI | GCTCTTC | 1 cut(s) | 3645 |
| BspT107I | GGYRCC | 2 cut(s) | 2524, 2816 |
| BspTI | CTTAAG | 2 cut(s) | 290, 3281 |
| BspTNI | GGTCTC | 3 cut(s) | 380, 2057, 2108 |
| BsrBI | CCGCTC | 1 cut(s) | 160 |
| BsrDI | GCAATG | 2 cut(s) | 323, 3081 |
| BsrFI | RCCGGY | 1 cut(s) | 2872 |
| BsrGI | TGTACA | 1 cut(s) | 1524 |
| BsrI | ACTGG | 6 cut(s) | 271, 442, 1801, 2139, 2208, 2818 |
| BssAI | RCCGGY | 1 cut(s) | 2872 |
| BssT1I | CCWWGG | 6 cut(s) | 220, 1033, 1566, 1953, 2708, 3499 |
| Bst2UI | CCWGG | 3 cut(s) | 105, 925, 3192 |
| Bst4CI | ACNGT | 9 cut(s) | 607, 626, 1873, 2025, 2407, 2808, 3071, 3529, 3603 |
| Bst6I | CTCTTC | 3 cut(s) | 675, 2829, 3645 |
| BstAFI | CTTAAG | 2 cut(s) | 290, 3281 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 3136, 3277 |
| BstAUI | TGTACA | 1 cut(s) | 1524 |
| BstDSI | CCRYGG | 4 cut(s) | 1033, 1566, 2056, 2698 |
| BstFNI | CGCG | 3 cut(s) | 2700, 2802, 3442 |
| BstHHI | GCGC | 4 cut(s) | 132, 297, 3442, 3657 |
| BstMAI | GTCTC | 4 cut(s) | 380, 1316, 2057, 2108 |
| BstNI | CCWGG | 3 cut(s) | 105, 925, 3192 |
| BstNSI | RCATGY | 3 cut(s) | 1523, 1754, 2600 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1296 |
| BstSCI | CCNGG | 3 cut(s) | 103, 923, 3190 |
| BstSFI | CTRYAG | 5 cut(s) | 618, 1208, 1647, 1851, 2928 |
| BstSLI | GKGCMC | 1 cut(s) | 2527 |
| BstUI | CGCG | 3 cut(s) | 2700, 2802, 3442 |
| BstV1I | GCAGC | 7 cut(s) | 1270, 1369, 1821, 2296, 2881, 3324, 3676 |
| BstV2I | GAAGAC | 1 cut(s) | 116 |
| BstX2I | RGATCY | 5 cut(s) | 506, 805, 824, 968, 1532 |
| BstYI | RGATCY | 5 cut(s) | 506, 805, 824, 968, 1532 |
| Bsu15I | ATCGAT | 1 cut(s) | 3720 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1113, 2289 |
| BsuRI | GGCC | 4 cut(s) | 92, 1958, 3365, 3498 |
| BsuTUI | ATCGAT | 1 cut(s) | 3720 |
| BtgI | CCRYGG | 4 cut(s) | 1033, 1566, 2056, 2698 |
| BtgZI | GCGATG | 2 cut(s) | 1116, 2783 |
| BveI | ACCTGC | 2 cut(s) | 1201, 1844 |
| CaiI | CAGNNNCTG | 5 cut(s) | 1796, 2167, 3197, 3419, 3527 |
| CciI | TCATGA | 2 cut(s) | 1717, 3229 |
| CfoI | GCGC | 4 cut(s) | 132, 297, 3442, 3657 |
| Cfr10I | RCCGGY | 1 cut(s) | 2872 |
| Cfr13I | GGNCC | 3 cut(s) | 53, 1071, 3377 |
| Cfr42I | CCGCGG | 1 cut(s) | 2701 |
| ClaI | ATCGAT | 1 cut(s) | 3720 |
| CseI | GACGC | 2 cut(s) | 3002, 3413 |
| Csp6I | GTAC | 5 cut(s) | 816, 1525, 2121, 2804, 2817 |
| CviQI | GTAC | 5 cut(s) | 816, 1525, 2121, 2804, 2817 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1078, 1394 |
| DriI | GACNNNNNGTC | 3 cut(s) | 700, 3211, 3423 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1078, 1394 |
| EaeI | YGGCCR | 2 cut(s) | 1956, 3363 |
| Eam1104I | CTCTTC | 3 cut(s) | 675, 2829, 3645 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 700, 3211, 3423 |
| EarI | CTCTTC | 3 cut(s) | 675, 2829, 3645 |
| Ecl136II | GAGCTC | 2 cut(s) | 708, 770 |
| Eco130I | CCWWGG | 6 cut(s) | 220, 1033, 1566, 1953, 2708, 3499 |
| Eco24I | GRGCYC | 2 cut(s) | 710, 772 |
| Eco31I | GGTCTC | 3 cut(s) | 380, 2057, 2108 |
| Eco32I | GATATC | 2 cut(s) | 1087, 3346 |
| Eco47I | GGWCC | 3 cut(s) | 53, 1071, 3377 |
| Eco53kI | GAGCTC | 2 cut(s) | 708, 770 |
| Eco57I | CTGAAG | 5 cut(s) | 69, 105, 2318, 2810, 3234 |
| Eco81I | CCTNAGG | 2 cut(s) | 1113, 2289 |
| EcoICRI | GAGCTC | 2 cut(s) | 708, 770 |
| EcoRII | CCWGG | 3 cut(s) | 103, 923, 3190 |
| EcoRV | GATATC | 2 cut(s) | 1087, 3346 |
| EcoT14I | CCWWGG | 6 cut(s) | 220, 1033, 1566, 1953, 2708, 3499 |
| EcoT22I | ATGCAT | 2 cut(s) | 1752, 1756 |
| EcoT38I | GRGCYC | 2 cut(s) | 710, 772 |
| ErhI | CCWWGG | 6 cut(s) | 220, 1033, 1566, 1953, 2708, 3499 |
| FaqI | GGGAC | 4 cut(s) | 237, 659, 1084, 1882 |
| FauI | CCCGC | 3 cut(s) | 2034, 2693, 3564 |
| FauNDI | CATATG | 3 cut(s) | 2665, 2970, 3388 |
| FbaI | TGATCA | 2 cut(s) | 58, 3691 |
| FblI | GTMKAC | 1 cut(s) | 3399 |
| Fnu4HI | GCNGC | 8 cut(s) | 1284, 1383, 1810, 2285, 2870, 3338, 3496, 3665 |
| FriOI | GRGCYC | 2 cut(s) | 710, 772 |
| Fsp4HI | GCNGC | 8 cut(s) | 1284, 1383, 1810, 2285, 2870, 3338, 3496, 3665 |
| FspBI | CTAG | 5 cut(s) | 1841, 2378, 2601, 3341, 3642 |
| GlaI | GCGC | 4 cut(s) | 131, 296, 3441, 3656 |
| GluI | GCNGC | 8 cut(s) | 1284, 1383, 1810, 2285, 2870, 3338, 3496, 3665 |
| GsuI | CTGGAG | 2 cut(s) | 87, 254 |
| HaeIII | GGCC | 4 cut(s) | 92, 1958, 3365, 3498 |
| HapII | CCGG | 2 cut(s) | 803, 2873 |
| HgaI | GACGC | 2 cut(s) | 3002, 3413 |
| HhaI | GCGC | 4 cut(s) | 132, 297, 3442, 3657 |
| Hin6I | GCGC | 4 cut(s) | 130, 295, 3440, 3655 |
| HinP1I | GCGC | 4 cut(s) | 130, 295, 3440, 3655 |
| HincII | GTYRAC | 2 cut(s) | 2811, 3261 |
| HindII | GTYRAC | 2 cut(s) | 2811, 3261 |
| HindIII | AAGCTT | 4 cut(s) | 41, 2082, 2762, 3246 |
| HpaII | CCGG | 2 cut(s) | 803, 2873 |
| HphI | GGTGA | 5 cut(s) | 1256, 2056, 2090, 2852, 3727 |
| Hpy166II | GTNNAC | 7 cut(s) | 1510, 1525, 1540, 2811, 3261, 3400, 3706 |
| Hpy8I | GTNNAC | 7 cut(s) | 1510, 1525, 1540, 2811, 3261, 3400, 3706 |
| Hpy99I | CGWCG | 1 cut(s) | 2444 |
| HpyAV | CCTTC | 8 cut(s) | 172, 1420, 1541, 1845, 2236, 2293, 2895, 3236 |
| HpyCH4III | ACNGT | 9 cut(s) | 607, 626, 1873, 2025, 2407, 2808, 3071, 3529, 3603 |
| HpyCH4IV | ACGT | 2 cut(s) | 34, 2439 |
| HpySE526I | ACGT | 2 cut(s) | 34, 2439 |
| HspAI | GCGC | 4 cut(s) | 130, 295, 3440, 3655 |
| KpnI | GGTACC | 1 cut(s) | 2820 |
| KroI | GCCGGC | 1 cut(s) | 2872 |
| KroNI | GCCGGC | 1 cut(s) | 2874 |
| Ksp22I | TGATCA | 2 cut(s) | 58, 3691 |
| KspI | CCGCGG | 1 cut(s) | 2701 |
| LguI | GCTCTTC | 1 cut(s) | 3645 |
| LmnI | GCTCC | 6 cut(s) | 767, 1105, 1118, 1379, 1831, 2968 |
| Lsp1109I | GCAGC | 7 cut(s) | 1270, 1369, 1821, 2296, 2881, 3324, 3676 |
| LweI | GCATC | 6 cut(s) | 737, 788, 1763, 2885, 3126, 3666 |
| MaeI | CTAG | 5 cut(s) | 1841, 2378, 2601, 3341, 3642 |
| MaeII | ACGT | 2 cut(s) | 34, 2439 |
| MaeIII | GTNAC | 9 cut(s) | 215, 227, 418, 742, 1276, 1642, 2269, 3302, 3415 |
| MbiI | CCGCTC | 1 cut(s) | 160 |
| MfeI | CAATTG | 1 cut(s) | 3435 |
| MflI | RGATCY | 5 cut(s) | 506, 805, 824, 968, 1532 |
| MhlI | GDGCHC | 4 cut(s) | 710, 772, 2527, 3589 |
| MlsI | TGGCCA | 2 cut(s) | 1958, 3365 |
| MluNI | TGGCCA | 2 cut(s) | 1958, 3365 |
| MlyI | GAGTC | 8 cut(s) | 552, 589, 1121, 1318, 1609, 3200, 3256, 3318 |
| MmeI | TCCRAC | 4 cut(s) | 347, 1357, 1907, 2818 |
| Mox20I | TGGCCA | 2 cut(s) | 1958, 3365 |
| Mph1103I | ATGCAT | 2 cut(s) | 1752, 1756 |
| MroNI | GCCGGC | 1 cut(s) | 2872 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2673 |
| MscI | TGGCCA | 2 cut(s) | 1958, 3365 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1272, 1722, 2556, 2601, 3149 |
| Msp20I | TGGCCA | 2 cut(s) | 1958, 3365 |
| MspA1I | CMGCKG | 3 cut(s) | 1283, 2041, 2700 |
| MspCI | CTTAAG | 2 cut(s) | 290, 3281 |
| MspI | CCGG | 2 cut(s) | 803, 2873 |
| MspR9I | CCNGG | 3 cut(s) | 105, 925, 3192 |
| MunI | CAATTG | 1 cut(s) | 3435 |
| Mva1269I | GAATGC | 2 cut(s) | 297, 3271 |
| MvaI | CCWGG | 3 cut(s) | 105, 925, 3192 |
| MvnI | CGCG | 3 cut(s) | 2700, 2802, 3442 |
| NaeI | GCCGGC | 1 cut(s) | 2874 |
| NcoI | CCATGG | 2 cut(s) | 1033, 1566 |
| NdeI | CATATG | 3 cut(s) | 2665, 2970, 3388 |
| NgoMIV | GCCGGC | 1 cut(s) | 2872 |
| NlaIV | GGNNCC | 9 cut(s) | 807, 1072, 1734, 1833, 2478, 2526, 2706, 2818, 3033 |
| NmuCI | GTSAC | 5 cut(s) | 215, 418, 1276, 3302, 3415 |
| NsiI | ATGCAT | 2 cut(s) | 1752, 1756 |
| NspI | RCATGY | 3 cut(s) | 1523, 1754, 2600 |
| PaeI | GCATGC | 2 cut(s) | 1754, 2600 |
| PagI | TCATGA | 2 cut(s) | 1717, 3229 |
| PaqCI | CACCTGC | 1 cut(s) | 1844 |
| PciI | ACATGT | 1 cut(s) | 1519 |
| PciSI | GCTCTTC | 1 cut(s) | 3645 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3589 |
| PctI | GAATGC | 2 cut(s) | 297, 3271 |
| PdiI | GCCGGC | 1 cut(s) | 2874 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2673 |
| PflFI | GACNNNGTC | 1 cut(s) | 3527 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2203 |
| PkrI | GCNGC | 8 cut(s) | 1285, 1384, 1811, 2286, 2871, 3339, 3497, 3666 |
| PleI | GAGTC | 8 cut(s) | 551, 589, 1121, 1318, 1608, 3200, 3256, 3317 |
| PpsI | GAGTC | 8 cut(s) | 551, 589, 1121, 1318, 1608, 3200, 3256, 3317 |
| PscI | ACATGT | 1 cut(s) | 1519 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1296 |
| PshBI | ATTAAT | 1 cut(s) | 149 |
| PsiI | TTATAA | 2 cut(s) | 2006, 3748 |
| Psp124BI | GAGCTC | 2 cut(s) | 710, 772 |
| Psp6I | CCWGG | 3 cut(s) | 103, 923, 3190 |
| PspGI | CCWGG | 3 cut(s) | 103, 923, 3190 |
| PspN4I | GGNNCC | 9 cut(s) | 807, 1072, 1734, 1833, 2478, 2526, 2706, 2818, 3033 |
| PspPI | GGNCC | 3 cut(s) | 53, 1071, 3377 |
| PstI | CTGCAG | 5 cut(s) | 622, 1212, 1651, 1855, 2932 |
| PstNI | CAGNNNCTG | 5 cut(s) | 1796, 2167, 3197, 3419, 3527 |
| PsuI | RGATCY | 5 cut(s) | 506, 805, 824, 968, 1532 |
| PsyI | GACNNNGTC | 1 cut(s) | 3527 |
| PvuII | CAGCTG | 1 cut(s) | 1283 |
| RsaI | GTAC | 5 cut(s) | 817, 1526, 2122, 2805, 2818 |
| RsaNI | GTAC | 5 cut(s) | 816, 1525, 2121, 2804, 2817 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1272, 1722, 2556, 2601, 3149 |
| SacI | GAGCTC | 2 cut(s) | 710, 772 |
| SacII | CCGCGG | 1 cut(s) | 2701 |
| SapI | GCTCTTC | 1 cut(s) | 3645 |
| SatI | GCNGC | 8 cut(s) | 1284, 1383, 1810, 2285, 2870, 3338, 3496, 3665 |
| Sau96I | GGNCC | 3 cut(s) | 53, 1071, 3377 |
| SbfI | CCTGCAGG | 1 cut(s) | 1855 |
| SchI | GAGTC | 8 cut(s) | 552, 589, 1121, 1318, 1609, 3200, 3256, 3318 |
| ScrFI | CCNGG | 3 cut(s) | 105, 925, 3192 |
| SdaI | CCTGCAGG | 1 cut(s) | 1855 |
| SduI | GDGCHC | 4 cut(s) | 710, 772, 2527, 3589 |
| SfaNI | GCATC | 6 cut(s) | 737, 788, 1763, 2885, 3126, 3666 |
| SfcI | CTRYAG | 5 cut(s) | 618, 1208, 1647, 1851, 2928 |
| Sfr303I | CCGCGG | 1 cut(s) | 2701 |
| SgrBI | CCGCGG | 1 cut(s) | 2701 |
| SinI | GGWCC | 3 cut(s) | 53, 1071, 3377 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1272, 1722, 2556, 2601, 3149 |
| SmlI | CTYRAG | 4 cut(s) | 290, 773, 3281, 3350 |
| SmoI | CTYRAG | 4 cut(s) | 290, 773, 3281, 3350 |
| SphI | GCATGC | 2 cut(s) | 1754, 2600 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1855 |
| SspI | AATATT | 2 cut(s) | 3065, 3109 |
| SspMI | CTAG | 5 cut(s) | 1841, 2378, 2601, 3341, 3642 |
| SstI | GAGCTC | 2 cut(s) | 710, 772 |
| StyD4I | CCNGG | 3 cut(s) | 103, 923, 3190 |
| StyI | CCWWGG | 6 cut(s) | 220, 1033, 1566, 1953, 2708, 3499 |
| TaaI | ACNGT | 9 cut(s) | 607, 626, 1873, 2025, 2407, 2808, 3071, 3529, 3603 |
| TaiI | ACGT | 2 cut(s) | 37, 2442 |
| TatI | WGTACW | 3 cut(s) | 815, 1524, 2120 |
| TauI | GCSGC | 1 cut(s) | 3498 |
| TseFI | GTSAC | 5 cut(s) | 215, 418, 1276, 3302, 3415 |
| TseI | GCWGC | 7 cut(s) | 1283, 1382, 1809, 2284, 2869, 3337, 3664 |
| Tsp45I | GTSAC | 5 cut(s) | 215, 418, 1276, 3302, 3415 |
| TspGWI | ACGGA | 3 cut(s) | 2045, 3040, 3168 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3527 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2203 |
| Vha464I | CTTAAG | 2 cut(s) | 290, 3281 |
| VpaK11BI | GGWCC | 3 cut(s) | 53, 1071, 3377 |
| VspI | ATTAAT | 1 cut(s) | 149 |
| XapI | RAATTY | 7 cut(s) | 1348, 1883, 2155, 2611, 2642, 2749, 3371 |
| XceI | RCATGY | 3 cut(s) | 1523, 1754, 2600 |
| XmiI | GTMKAC | 1 cut(s) | 3399 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2673 |
| XspI | CTAG | 5 cut(s) | 1841, 2378, 2601, 3341, 3642 |
| Zsp2I | ATGCAT | 2 cut(s) | 1752, 1756 |