Rorug05G0061300

DUF1087

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0005784
Physical Location & Seq
Forward (+)
5309452 .. 5311752
2301 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0061300.1

Sequence Viewer

Length: 2094 bp
ATGTTTTCCCCTGTTTCTCATGTCCTCTGCTTCTCCACCATGAAAACCCTTCTCATCTTTCTTCTCCTCCTCTCCCTCCGACCCCTCTTCGCCGTCGATTTCATCTTCAACGGCTTTAACTCCTCCTCCAACCTCCTCCTCTTCGGCAACGCCACCGTCTCATCTCAAATCCTCACTATCACAAACGCCACCAGCTACTCCATCGGCCGAGCTCTCTACAAGTCCAAAATCCCAACCAAAGCTCCGAACTCTTCATACATCAACCCTTTCTCGACCTCCTTCGTCTTCTCCATCGCTCCTGACAAGAACACTCTCCCCGGCCACGGCATGGTCTTCATCTTCACGCCCGCCGAGGGCATAAACGGAACCAGCGCCAGCGAGCATTTAGGGTTGCTCAACTTCACAAACAGAGGCCAGTCGACGAACCACGTTTTTGGGGTCGAGTTCGATGTGTTTAAGAACGAGGAGTTTAAGGACATTAGTAACAACCACGTCGGAATTGATGTGAACTCATTGGAGTCGGTTAATGCATCCGAAGCCGGGTATTGGAGTGAGGATAAGGTTTTCAAGAAGTTGAAGCTCAACAATGGTGAGAATTACCAGGCTTGGATTGATTATAAGGATTCGGTGATTAATGTGACTATGGTGAAAGCTGGGATGGCGAAGCCGAAGACTCCGTTGTTGAGTTATGTTTATAATCTTTCTGACGTTTTGGAGGATGAAATGTTTGTCGGCTTCACAGGCTCAACGGGGCAATTAGTCGAAAGTCACATGATTTTGGCTTGGAGTTTCAGCAATACTAATTTTTCTTTGGGTGAGAGTTTGATCACTTCTGGCTTGCCTAATTTTGTGCTTCCTGAGGCTTCGATTTTTAAGTCTAAAGGGTTTATTGCTGGAGTTACAGTTGGGGGTTTGTTTGTAGTTTGTGTGATTGCTCTGTTTACTCTGTTTTTGGTTAAGAGAAAAAGGAGGATGAAAAGGGAGAGAGATGAAATGGAGGATTGGGAATTGGAGTACTGGCCTCACCGGATTACTTATTCGGAAATTGAGGCGGCGACGAAGGGGTTTCGGGAAGAAAATGTGATTGGAATTGGAGGGAATGGGAAGGTGTACAAGGGTGTTTTGGCAGGAGGGGCAGAGGTTGCGGTGAAGAGAATTTCACATGAGAATAATGGAATGAGAGAGTTCTTGGCTGAGATTTCAAGCATTGGGAGATTGAAGCATAGAAATTTGGTGGGATTGAGAGGTTGGTGTAAGAAAGAGAAGGGGAATTTCATGTTGGTCTATGATTATATGGAAAATGGGAGTTTGGATAAGTTGATTTTTGATTGTGATGAGAGTAAGATGTTGGGGTTTGAAGACAGGATTAGGGTTTTGAGAGATGTGGCTTCTGGGGTTTTGTACTTACATGAAGGATGGGAATCTAAAGTGTTGCATAGGGACATTAAGGCAAGCAATGTGTTACTTGATAGGGAAATGAATGGAAGGTTAGGGGATTTCGGGTTGGCGAGGATGCACGGGCATGGTGATGTGCCCGGCACTACTCGGGTGGTAGGAACCGTGGGGTACTTGGCCCCGGAAATCATTCACGTAGGGCGAGCGTCCGCCCAGACGGACGTTTTCGGGTTCGGGATCTTGATTTTAGAAGTGATGTGTGGGAGGAGGCCTATAGAGGAAGGGAAGCCACCCTTGGTGGAATGGGTGTGGCAACTCATGGTGAAAGGGCAATTGCTAAATGCGTTTGATGAGAGGTTGAGGGGCAGAGGTTTGGGGTTAAGTGAAGAGGAGGTGGAGAGGGTTTTACATTTGGGTTTGTTGTGTGCTTACCCCGAGCCAAATGCAAGACCATCAATGAGGCAAGTGGTGAAAGTTTTGGAGGGGAAGAATGACAATGAGGGCTGCGATGAGTCTGAAACTGAGGAAATGGATGCTTATTTGCTTCAGAAATTGCAATCCAAGGACATGTGGTCTGAGTTTTCACATAATTTTGGTTATGGATTATCATCACACCCAACTATTCAAGATATCAAGCAGTCAATATCCAACTCAATGTCTCTCTCTTGGTCCAGTACTAATATAGTGGAGGGTAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000118 GO:0000228 GO:0000785 GO:0000790 GO:0000792 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005829 GO:0005911 GO:0006323 GO:0006325 GO:0006338 GO:0006355 GO:0006357 GO:0006464 GO:0006473 GO:0006475 GO:0006479 GO:0006807 GO:0006996 GO:0006997 GO:0007275 GO:0007276 GO:0007281 GO:0007283 GO:0007286 GO:0007289 GO:0007399 GO:0007417 GO:0007420 GO:0008150 GO:0008152 GO:0008213 GO:0008285 GO:0009506 GO:0009889 GO:0009966 GO:0009967 GO:0009987 GO:0010468 GO:0010556 GO:0010646 GO:0010647 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016573 GO:0016581 GO:0016604 GO:0016607 GO:0017053 GO:0018022 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0019953 GO:0021895 GO:0021953 GO:0022008 GO:0022412 GO:0022414 GO:0023051 GO:0023056 GO:0030054 GO:0030154 GO:0030182 GO:0030900 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0034728 GO:0034968 GO:0035064 GO:0035092 GO:0035093 GO:0036211 GO:0042127 GO:0042393 GO:0043044 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043486 GO:0043543 GO:0043933 GO:0043967 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044703 GO:0045165 GO:0048232 GO:0048468 GO:0048513 GO:0048515 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048609 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0051704 GO:0055044 GO:0060255 GO:0060322 GO:0060850 GO:0061628 GO:0065007 GO:0070013 GO:0070603 GO:0070734 GO:0071103 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090545 GO:0090568 GO:0098532 GO:0140030 GO:0140034 GO:1901564 GO:1901796 GO:1901798 GO:1902494 GO:1902531 GO:1902533 GO:1903506 GO:1904949 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko05165 ko05203 map05165 map05203
Pfam Domains
Protein Families
Chromo DUF1087 Helicase_C PHD SNF2_N

Protein Analysis

697

Amino Acids

77.77

Weight (kDa)

6.0

Isoelectric Point (pI)

29.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 32 - 268 6e-69 Legume lectin domain
Lectin_L-type_dom PF18483 43 - 257 1.3e-10 Legume lectin beta-barrel domain
Pkinase PF00069 357 - 622 5.6e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 359 - 625 4.7e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 618, 696
AccB7I CCANNNNNTGG 1 cut(s) 328
AccI GTMKAC 1 cut(s) 419
AciI CCGC 4 cut(s) 348, 1052, 1145, 1605
AclWI GGATC 1 cut(s) 1640
AcoI YGGCCR 2 cut(s) 205, 319
AcsI RAATTY 3 cut(s) 1155, 1228, 1270
AcuI CTGAAG 1 cut(s) 1925
AfaI GTAC 5 cut(s) 1016, 1112, 1403, 1568, 2071
AfiI CCNNNNNNNGG 5 cut(s) 323, 328, 353, 540, 546
AflIII ACRYGT 1 cut(s) 1962
AgsI TTSAA 7 cut(s) 109, 568, 577, 1203, 1219, 1358, 2021
AhdI GACNNNNNGTC 1 cut(s) 1966
AjiI CACGTC 1 cut(s) 493
AjnI CCWGG 1 cut(s) 600
AjuI GAANNNNNNNTTGG 6 cut(s) 1068, 1100, 1262, 1294, 1673, 1705
AluBI AGCT 5 cut(s) 195, 212, 242, 580, 653
AluI AGCT 5 cut(s) 195, 212, 242, 580, 653
Alw21I GWGCWC 1 cut(s) 214
Alw26I GTCTC 2 cut(s) 163, 2058
AlwI GGATC 1 cut(s) 1640
Ama87I CYCGRG 2 cut(s) 1545, 1829
AoxI GGCC 6 cut(s) 205, 319, 412, 1019, 1572, 1664
ApeKI GCWGC 1 cut(s) 1899
ApoI RAATTY 3 cut(s) 1155, 1228, 1270
AseI ATTAAT 1 cut(s) 633
Asp700I GAANNNNTTC 1 cut(s) 1584
AspLEI GCGC 1 cut(s) 374
AspS9I GGNCC 2 cut(s) 1573, 2064
AsuC2I CCSGG 4 cut(s) 318, 541, 1536, 1577
AsuHPI GGTGA 9 cut(s) 602, 640, 658, 827, 1016, 1159, 1538, 1729, 1876
AvaI CYCGRG 2 cut(s) 1545, 1829
AvaII GGWCC 1 cut(s) 2064
AxyI CCTNAGG 1 cut(s) 858
BaeGI GKGCMC 1 cut(s) 1536
BanII GRGCYC 1 cut(s) 214
BbsI GAAGAC 4 cut(s) 277, 325, 677, 1365
Bbv12I GWGCWC 1 cut(s) 214
BbvI GCAGC 1 cut(s) 1886
BccI CCATC 5 cut(s) 209, 299, 652, 1410, 1855
BceAI ACGGC 3 cut(s) 77, 127, 340
BcgI CGANNNNNNTGC 2 cut(s) 1820, 1854
BciT130I CCWGG 1 cut(s) 602
BclI TGATCA 1 cut(s) 825
BcnI CCSGG 4 cut(s) 318, 541, 1536, 1577
BcoDI GTCTC 2 cut(s) 163, 2058
BfmI CTRYAG 1 cut(s) 1668
BfoI RGCGCY 1 cut(s) 375
BisI GCNGC 2 cut(s) 1053, 1900
BlsI GCNGC 2 cut(s) 1054, 1901
BmcAI AGTACT 2 cut(s) 1016, 2071
Bme1390I CCNGG 5 cut(s) 318, 541, 602, 1536, 1577
Bme18I GGWCC 1 cut(s) 2064
BmeRI GACNNNNNGTC 1 cut(s) 1966
BmeT110I CYCGRG 2 cut(s) 1545, 1829
BmgBI CACGTC 1 cut(s) 493
BmgT120I GGNCC 2 cut(s) 1573, 2064
BmiI GGNNCC 3 cut(s) 367, 1558, 1575
BmrFI CCNGG 5 cut(s) 318, 541, 602, 1536, 1577
BmsI GCATC 3 cut(s) 539, 1503, 1918
BpiI GAAGAC 4 cut(s) 277, 325, 677, 1365
BpmI CTGGAG 1 cut(s) 915
BpuMI CCSGG 4 cut(s) 318, 541, 1536, 1577
BsaAI YACGTR 1 cut(s) 1591
BsaBI GATNNNNATC 2 cut(s) 1420, 2002
BsaJI CCNNGG 7 cut(s) 316, 322, 351, 1560, 1575, 1689, 1956
BsaWI WCCGGW 1 cut(s) 1026
BsaXI ACNNNNNCTCC 7 cut(s) 110, 140, 226, 256, 888, 918, 2075
Bsc4I CCNNNNNNNGG 5 cut(s) 323, 328, 353, 540, 546
Bse1I ACTGG 3 cut(s) 415, 1022, 2067
Bse21I CCTNAGG 1 cut(s) 858
Bse3DI GCAATG 1 cut(s) 1462
Bse8I GATNNNNATC 2 cut(s) 1420, 2002
BseBI CCWGG 1 cut(s) 602
BseDI CCNNGG 7 cut(s) 316, 322, 351, 1560, 1575, 1689, 1956
BseGI GGATG 7 cut(s) 530, 663, 724, 978, 1421, 1518, 1933
BseJI GATNNNNATC 2 cut(s) 1420, 2002
BseLI CCNNNNNNNGG 5 cut(s) 323, 328, 353, 540, 546
BseMI GCAATG 1 cut(s) 1462
BseMII CTCAG 4 cut(s) 849, 1185, 1908, 1962
BseNI ACTGG 3 cut(s) 415, 1022, 2067
BseRI GAGGAG 9 cut(s) 56, 59, 112, 115, 125, 128, 479, 1675, 1799
BseSI GKGCMC 1 cut(s) 1536
BseX3I CGGCCG 1 cut(s) 205
BseXI GCAGC 1 cut(s) 1886
BseYI CCCAGC 1 cut(s) 653
Bsh1285I CGRYCG 1 cut(s) 208
BshFI GGCC 6 cut(s) 207, 321, 414, 1021, 1574, 1666
BsiEI CGRYCG 1 cut(s) 208
BsiHKAI GWGCWC 1 cut(s) 214
BsiHKCI CYCGRG 2 cut(s) 1545, 1829
BsiSI CCGG 5 cut(s) 318, 540, 1027, 1536, 1577
BslFI GGGAC 1 cut(s) 1454
BslI CCNNNNNNNGG 5 cut(s) 323, 328, 353, 540, 546
BsmAI GTCTC 2 cut(s) 163, 2058
BsmBI CGTCTC 1 cut(s) 163
BsmFI GGGAC 1 cut(s) 1454
BsnI GGCC 6 cut(s) 207, 321, 414, 1021, 1574, 1666
BsoBI CYCGRG 2 cut(s) 1545, 1829
Bsp1286I GDGCHC 2 cut(s) 214, 1536
Bsp1407I TGTACA 1 cut(s) 1110
Bsp143I GATC 2 cut(s) 825, 1632
BspACI CCGC 4 cut(s) 348, 1052, 1145, 1605
BspANI GGCC 6 cut(s) 207, 321, 414, 1021, 1574, 1666
BspCNI CTCAG 4 cut(s) 850, 1186, 1909, 1963
BspLI GGNNCC 3 cut(s) 367, 1558, 1575
BspPI GGATC 1 cut(s) 1640
BsrDI GCAATG 1 cut(s) 1462
BsrGI TGTACA 1 cut(s) 1110
BsrI ACTGG 3 cut(s) 415, 1022, 2067
BssECI CCNNGG 7 cut(s) 316, 322, 351, 1560, 1575, 1689, 1956
BssMI GATC 2 cut(s) 825, 1632
BssT1I CCWWGG 2 cut(s) 1689, 1956
Bst2UI CCWGG 1 cut(s) 602
Bst4CI ACNGT 3 cut(s) 157, 904, 1561
Bst6I CTCTTC 5 cut(s) 92, 146, 256, 1145, 1776
BstAPI GCANNNNNTGC 1 cut(s) 1142
BstAUI TGTACA 1 cut(s) 1110
BstBAI YACGTR 1 cut(s) 1591
BstC8I GCNNGC 6 cut(s) 348, 376, 380, 839, 1453, 1599
BstDEI CTNAG 4 cut(s) 858, 1194, 1917, 1971
BstDSI CCRYGG 2 cut(s) 322, 1560
BstF5I GGATG 7 cut(s) 530, 663, 724, 978, 1421, 1518, 1933
BstH2I RGCGCY 1 cut(s) 375
BstHHI GCGC 1 cut(s) 374
BstKTI GATC 2 cut(s) 828, 1635
BstMAI GTCTC 2 cut(s) 163, 2058
BstMBI GATC 2 cut(s) 825, 1632
BstMCI CGRYCG 1 cut(s) 208
BstMWI GCNNNNNNNGC 5 cut(s) 536, 659, 741, 1133, 1142
BstNI CCWGG 1 cut(s) 602
BstNSI RCATGY 1 cut(s) 1966
BstSCI CCNGG 5 cut(s) 316, 539, 600, 1534, 1575
BstSFI CTRYAG 1 cut(s) 1668
BstSLI GKGCMC 1 cut(s) 1536
BstV1I GCAGC 1 cut(s) 1886
BstV2I GAAGAC 4 cut(s) 277, 325, 677, 1365
BstX2I RGATCY 1 cut(s) 1632
BstXI CCANNNNNNTGG 1 cut(s) 434
BstYI RGATCY 1 cut(s) 1632
BstZI CGGCCG 1 cut(s) 205
Bsu36I CCTNAGG 1 cut(s) 858
BsuRI GGCC 6 cut(s) 207, 321, 414, 1021, 1574, 1666
BtgI CCRYGG 2 cut(s) 322, 1560
BtgZI GCGATG 2 cut(s) 277, 1917
BtrI CACGTC 1 cut(s) 493
BtsCI GGATG 7 cut(s) 530, 663, 724, 978, 1421, 1518, 1933
Cac8I GCNNGC 6 cut(s) 348, 376, 380, 839, 1453, 1599
CfoI GCGC 1 cut(s) 374
Cfr13I GGNCC 2 cut(s) 1573, 2064
CseI GACGC 1 cut(s) 1590
Csp6I GTAC 5 cut(s) 1015, 1111, 1402, 1567, 2070
CviQI GTAC 5 cut(s) 1015, 1111, 1402, 1567, 2070
DdeI CTNAG 4 cut(s) 858, 1194, 1917, 1971
DpnI GATC 2 cut(s) 827, 1634
DpnII GATC 2 cut(s) 825, 1632
DriI GACNNNNNGTC 1 cut(s) 1966
EaeI YGGCCR 2 cut(s) 205, 319
EagI CGGCCG 1 cut(s) 205
Eam1104I CTCTTC 5 cut(s) 92, 146, 256, 1145, 1776
Eam1105I GACNNNNNGTC 1 cut(s) 1966
EarI CTCTTC 5 cut(s) 92, 146, 256, 1145, 1776
EciI GGCGGA 1 cut(s) 1594
Ecl136II GAGCTC 1 cut(s) 212
EclXI CGGCCG 1 cut(s) 205
Eco130I CCWWGG 2 cut(s) 1689, 1956
Eco147I AGGCCT 1 cut(s) 1666
Eco24I GRGCYC 1 cut(s) 214
Eco32I GATATC 1 cut(s) 2026
Eco47I GGWCC 1 cut(s) 2064
Eco52I CGGCCG 1 cut(s) 205
Eco53kI GAGCTC 1 cut(s) 212
Eco57I CTGAAG 1 cut(s) 1925
Eco81I CCTNAGG 1 cut(s) 858
Eco88I CYCGRG 2 cut(s) 1545, 1829
EcoICRI GAGCTC 1 cut(s) 212
EcoRII CCWGG 1 cut(s) 600
EcoRV GATATC 1 cut(s) 2026
EcoT14I CCWWGG 2 cut(s) 1689, 1956
EcoT22I ATGCAT 1 cut(s) 532
EcoT38I GRGCYC 1 cut(s) 214
ErhI CCWWGG 2 cut(s) 1689, 1956
Esp3I CGTCTC 1 cut(s) 163
FalI AAGNNNNNCTT 2 cut(s) 1673, 1705
FaqI GGGAC 1 cut(s) 1454
FauI CCCGC 1 cut(s) 355
FbaI TGATCA 1 cut(s) 825
FblI GTMKAC 1 cut(s) 419
Fnu4HI GCNGC 2 cut(s) 1053, 1900
FokI GGATG 7 cut(s) 517, 670, 731, 985, 1428, 1525, 1940
FriOI GRGCYC 1 cut(s) 214
Fsp4HI GCNGC 2 cut(s) 1053, 1900
GlaI GCGC 1 cut(s) 373
GluI GCNGC 2 cut(s) 1053, 1900
GsaI CCCAGC 1 cut(s) 657
GsuI CTGGAG 1 cut(s) 915
HaeII RGCGCY 1 cut(s) 375
HaeIII GGCC 6 cut(s) 207, 321, 414, 1021, 1574, 1666
HapII CCGG 5 cut(s) 318, 540, 1027, 1536, 1577
HgaI GACGC 1 cut(s) 1590
HhaI GCGC 1 cut(s) 374
Hin6I GCGC 1 cut(s) 372
HinP1I GCGC 1 cut(s) 372
HincII GTYRAC 1 cut(s) 420
HindII GTYRAC 1 cut(s) 420
HinfI GANTC 5 cut(s) 518, 623, 673, 1421, 1907
HpaII CCGG 5 cut(s) 318, 540, 1027, 1536, 1577
HphI GGTGA 9 cut(s) 602, 640, 658, 827, 1016, 1159, 1538, 1729, 1876
Hpy166II GTNNAC 4 cut(s) 420, 508, 942, 1111
Hpy188I TCNGA 9 cut(s) 80, 246, 497, 535, 706, 1042, 1912, 1944, 1972
Hpy188III TCNNGA 8 cut(s) 271, 299, 568, 857, 1070, 1630, 1636, 2021
Hpy8I GTNNAC 4 cut(s) 420, 508, 942, 1111
Hpy99I CGWCG 4 cut(s) 98, 424, 497, 1060
HpyAV CCTTC 8 cut(s) 59, 289, 1054, 1099, 1258, 1406, 1479, 1670
HpyCH4III ACNGT 3 cut(s) 157, 904, 1561
HpyCH4IV ACGT 5 cut(s) 429, 492, 708, 1590, 1617
HpyCH4V TGCA 5 cut(s) 530, 1435, 1516, 1841, 1951
HpyF10VI GCNNNNNNNGC 5 cut(s) 536, 659, 741, 1133, 1142
HpyF3I CTNAG 4 cut(s) 858, 1194, 1917, 1971
HpySE526I ACGT 5 cut(s) 429, 492, 708, 1590, 1617
HspAI GCGC 1 cut(s) 372
Ksp22I TGATCA 1 cut(s) 825
Kzo9I GATC 2 cut(s) 825, 1632
LmnI GCTCC 2 cut(s) 247, 301
Lsp1109I GCAGC 1 cut(s) 1886
LweI GCATC 3 cut(s) 539, 1503, 1918
MaeII ACGT 5 cut(s) 429, 492, 708, 1590, 1617
MaeIII GTNAC 5 cut(s) 482, 637, 767, 898, 1461
MalI GATC 2 cut(s) 827, 1634
MboI GATC 2 cut(s) 825, 1632
MfeI CAATTG 1 cut(s) 1727
MflI RGATCY 1 cut(s) 1632
MhlI GDGCHC 2 cut(s) 214, 1536
MlyI GAGTC 3 cut(s) 527, 667, 1916
MmeI TCCRAC 4 cut(s) 103, 153, 475, 2067
Mph1103I ATGCAT 1 cut(s) 532
MroXI GAANNNNTTC 1 cut(s) 1584
MseI TTAA 9 cut(s) 117, 456, 471, 525, 633, 873, 957, 1446, 1775
MslI CAYNNNNRTG 2 cut(s) 1521, 1527
MspI CCGG 5 cut(s) 318, 540, 1027, 1536, 1577
MspR9I CCNGG 5 cut(s) 318, 541, 602, 1536, 1577
MunI CAATTG 1 cut(s) 1727
MvaI CCWGG 1 cut(s) 602
MwoI GCNNNNNNNGC 5 cut(s) 536, 659, 741, 1133, 1142
NciI CCSGG 4 cut(s) 318, 541, 1536, 1577
NdeII GATC 2 cut(s) 825, 1632
NlaIV GGNNCC 3 cut(s) 367, 1558, 1575
NmeAIII GCCGAG 2 cut(s) 233, 376
NmuCI GTSAC 2 cut(s) 637, 767
NsiI ATGCAT 1 cut(s) 532
NspI RCATGY 1 cut(s) 1966
PceI AGGCCT 1 cut(s) 1666
PciI ACATGT 1 cut(s) 1962
PdmI GAANNNNTTC 1 cut(s) 1584
PfeI GAWTC 2 cut(s) 623, 1421
PflMI CCANNNNNTGG 1 cut(s) 328
PkrI GCNGC 2 cut(s) 1054, 1901
PleI GAGTC 3 cut(s) 526, 667, 1915
PpsI GAGTC 3 cut(s) 526, 667, 1915
Ppu21I YACGTR 1 cut(s) 1591
PscI ACATGT 1 cut(s) 1962
PshBI ATTAAT 1 cut(s) 633
PsiI TTATAA 2 cut(s) 618, 696
Psp124BI GAGCTC 1 cut(s) 214
Psp6I CCWGG 1 cut(s) 600
PspFI CCCAGC 1 cut(s) 653
PspGI CCWGG 1 cut(s) 600
PspN4I GGNNCC 3 cut(s) 367, 1558, 1575
PspPI GGNCC 2 cut(s) 1573, 2064
PsrI GAACNNNNNNTAC 2 cut(s) 239, 271
PsuI RGATCY 1 cut(s) 1632
RsaI GTAC 5 cut(s) 1016, 1112, 1403, 1568, 2071
RsaNI GTAC 5 cut(s) 1015, 1111, 1402, 1567, 2070
RseI CAYNNNNRTG 2 cut(s) 1521, 1527
SacI GAGCTC 1 cut(s) 214
SalI GTCGAC 1 cut(s) 418
SaqAI TTAA 9 cut(s) 117, 456, 471, 525, 633, 873, 957, 1446, 1775
SatI GCNGC 2 cut(s) 1053, 1900
Sau3AI GATC 2 cut(s) 825, 1632
Sau96I GGNCC 2 cut(s) 1573, 2064
ScaI AGTACT 2 cut(s) 1016, 2071
SchI GAGTC 3 cut(s) 527, 667, 1916
ScrFI CCNGG 5 cut(s) 318, 541, 602, 1536, 1577
SduI GDGCHC 2 cut(s) 214, 1536
SfaNI GCATC 3 cut(s) 539, 1503, 1918
SfcI CTRYAG 1 cut(s) 1668
SinI GGWCC 1 cut(s) 2064
SmiMI CAYNNNNRTG 2 cut(s) 1521, 1527
SseBI AGGCCT 1 cut(s) 1666
SsiI CCGC 4 cut(s) 348, 1052, 1145, 1605
SstI GAGCTC 1 cut(s) 214
StuI AGGCCT 1 cut(s) 1666
StyD4I CCNGG 5 cut(s) 316, 539, 600, 1534, 1575
StyI CCWWGG 2 cut(s) 1689, 1956
TaaI ACNGT 3 cut(s) 157, 904, 1561
TaiI ACGT 5 cut(s) 432, 495, 711, 1593, 1620
TaqI TCGA 7 cut(s) 96, 272, 419, 441, 447, 762, 866
TatI WGTACW 4 cut(s) 1014, 1110, 1401, 2069
TauI GCSGC 1 cut(s) 1055
TfiI GAWTC 2 cut(s) 623, 1421
Tru1I TTAA 9 cut(s) 117, 456, 471, 525, 633, 873, 957, 1446, 1775
Tru9I TTAA 9 cut(s) 117, 456, 471, 525, 633, 873, 957, 1446, 1775
TseFI GTSAC 2 cut(s) 637, 767
TseI GCWGC 1 cut(s) 1899
Tsp45I GTSAC 2 cut(s) 637, 767
TspGWI ACGGA 3 cut(s) 378, 666, 1628
Van91I CCANNNNNTGG 1 cut(s) 328
VpaK11BI GGWCC 1 cut(s) 2064
VspI ATTAAT 1 cut(s) 633
XapI RAATTY 3 cut(s) 1155, 1228, 1270
XceI RCATGY 1 cut(s) 1966
XmiI GTMKAC 1 cut(s) 419
XmnI GAANNNNTTC 1 cut(s) 1584
ZrmI AGTACT 2 cut(s) 1016, 2071
Zsp2I ATGCAT 1 cut(s) 532
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.