PHD zinc finger
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 956 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 123 |
| AccBSI | CCGCTC | 1 cut(s) | 567 |
| AccII | CGCG | 1 cut(s) | 122 |
| AciI | CCGC | 5 cut(s) | 113, 120, 149, 173, 567 |
| AclWI | GGATC | 2 cut(s) | 1296, 1309 |
| AcoI | YGGCCR | 1 cut(s) | 114 |
| AcsI | RAATTY | 5 cut(s) | 341, 1577, 1730, 1744, 1786 |
| AcuI | CTGAAG | 2 cut(s) | 702, 1167 |
| AcyI | GRCGYC | 1 cut(s) | 401 |
| AdeI | CACNNNGTG | 1 cut(s) | 123 |
| AfaI | GTAC | 4 cut(s) | 532, 840, 1528, 1646 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 123, 875, 1362 |
| AflII | CTTAAG | 1 cut(s) | 1637 |
| AgsI | TTSAA | 9 cut(s) | 157, 327, 442, 699, 821, 1166, 1178, 1211, 1766 |
| AjnI | CCWGG | 1 cut(s) | 882 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 482, 514, 1551, 1583 |
| AluBI | AGCT | 3 cut(s) | 348, 642, 1516 |
| AluI | AGCT | 3 cut(s) | 348, 642, 1516 |
| Alw21I | GWGCWC | 1 cut(s) | 1513 |
| Alw26I | GTCTC | 3 cut(s) | 69, 392, 1454 |
| AlwI | GGATC | 2 cut(s) | 1296, 1309 |
| AoxI | GGCC | 3 cut(s) | 114, 428, 1075 |
| ApaI | GGGCCC | 1 cut(s) | 1079 |
| ApeKI | GCWGC | 5 cut(s) | 133, 382, 642, 1142, 1720 |
| ApoI | RAATTY | 5 cut(s) | 341, 1577, 1730, 1744, 1786 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 375, 1744 |
| AspLEI | GCGC | 2 cut(s) | 78, 387 |
| AspS9I | GGNCC | 4 cut(s) | 53, 428, 1075, 1076 |
| AsuC2I | CCSGG | 2 cut(s) | 432, 869 |
| AsuHPI | GGTGA | 4 cut(s) | 27, 324, 1070, 1393 |
| AsuII | TTCGAA | 3 cut(s) | 338, 848, 1777 |
| AvaII | GGWCC | 1 cut(s) | 53 |
| BaeGI | GKGCMC | 1 cut(s) | 1079 |
| BamHI | GGATCC | 1 cut(s) | 1301 |
| BanI | GGYRCC | 1 cut(s) | 956 |
| BanII | GRGCYC | 1 cut(s) | 1079 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 822, 854 |
| BauI | CACGAG | 1 cut(s) | 661 |
| BbsI | GAAGAC | 1 cut(s) | 1319 |
| Bbv12I | GWGCWC | 1 cut(s) | 1513 |
| BbvI | GCAGC | 5 cut(s) | 120, 394, 629, 1129, 1732 |
| BccI | CCATC | 6 cut(s) | 521, 593, 716, 1292, 1319, 1468 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1170, 1204 |
| BciT130I | CCWGG | 1 cut(s) | 884 |
| BcnI | CCSGG | 2 cut(s) | 432, 869 |
| BcoDI | GTCTC | 3 cut(s) | 69, 392, 1454 |
| BfaI | CTAG | 3 cut(s) | 1649, 1688, 1736 |
| BfmI | CTRYAG | 2 cut(s) | 380, 1293 |
| BfrI | CTTAAG | 1 cut(s) | 1637 |
| BisI | GCNGC | 7 cut(s) | 114, 134, 173, 383, 643, 1143, 1721 |
| BlpI | GCTNAGC | 1 cut(s) | 1512 |
| BlsI | GCNGC | 7 cut(s) | 115, 135, 174, 384, 644, 1144, 1722 |
| Bme1390I | CCNGG | 3 cut(s) | 432, 869, 884 |
| Bme18I | GGWCC | 1 cut(s) | 53 |
| BmgT120I | GGNCC | 4 cut(s) | 53, 428, 1075, 1076 |
| BmiI | GGNNCC | 6 cut(s) | 201, 958, 1077, 1303, 1330, 1573 |
| BmrFI | CCNGG | 3 cut(s) | 432, 869, 884 |
| BmrI | ACTGGG | 1 cut(s) | 986 |
| BmsI | GCATC | 4 cut(s) | 356, 544, 584, 670 |
| BmuI | ACTGGG | 1 cut(s) | 986 |
| BoxI | GACNNNNGTC | 1 cut(s) | 58 |
| BpiI | GAAGAC | 1 cut(s) | 1319 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1512 |
| Bpu14I | TTCGAA | 3 cut(s) | 338, 848, 1777 |
| BpuMI | CCSGG | 2 cut(s) | 432, 869 |
| BsaBI | GATNNNNATC | 1 cut(s) | 574 |
| BsaHI | GRCGYC | 1 cut(s) | 401 |
| BsaJI | CCNNGG | 5 cut(s) | 87, 306, 431, 867, 1307 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 254, 284, 594, 624 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 123, 875, 1362 |
| Bse1I | ACTGG | 4 cut(s) | 150, 992, 1205, 1724 |
| Bse3DI | GCAATG | 1 cut(s) | 289 |
| Bse8I | GATNNNNATC | 1 cut(s) | 574 |
| BseBI | CCWGG | 1 cut(s) | 884 |
| BseDI | CCNNGG | 5 cut(s) | 87, 306, 431, 867, 1307 |
| BseGI | GGATG | 5 cut(s) | 454, 535, 895, 1201, 1479 |
| BseJI | GATNNNNATC | 1 cut(s) | 574 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 123, 875, 1362 |
| BseMI | GCAATG | 1 cut(s) | 289 |
| BseMII | CTCAG | 4 cut(s) | 242, 1280, 1470, 1526 |
| BseNI | ACTGG | 4 cut(s) | 150, 992, 1205, 1724 |
| BseRI | GAGGAG | 1 cut(s) | 267 |
| BseSI | GKGCMC | 1 cut(s) | 1079 |
| BseXI | GCAGC | 5 cut(s) | 120, 394, 629, 1129, 1732 |
| BseYI | CCCAGC | 1 cut(s) | 1215 |
| Bsh1236I | CGCG | 1 cut(s) | 122 |
| BshFI | GGCC | 3 cut(s) | 116, 430, 1077 |
| BshNI | GGYRCC | 1 cut(s) | 956 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1513 |
| BsiSI | CCGG | 3 cut(s) | 404, 431, 869 |
| BslFI | GGGAC | 1 cut(s) | 869 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 123, 875, 1362 |
| BsmAI | GTCTC | 3 cut(s) | 69, 392, 1454 |
| BsmBI | CGTCTC | 2 cut(s) | 69, 392 |
| BsmFI | GGGAC | 1 cut(s) | 869 |
| BsmI | GAATGC | 1 cut(s) | 413 |
| BsnI | GGCC | 3 cut(s) | 116, 430, 1077 |
| Bsp119I | TTCGAA | 3 cut(s) | 338, 848, 1777 |
| Bsp120I | GGGCCC | 1 cut(s) | 1075 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1079, 1513 |
| Bsp143I | GATC | 5 cut(s) | 28, 189, 507, 1301, 1756 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1512 |
| Bsp19I | CCATGG | 1 cut(s) | 87 |
| BspACI | CCGC | 5 cut(s) | 113, 120, 149, 173, 567 |
| BspANI | GGCC | 3 cut(s) | 116, 430, 1077 |
| BspCNI | CTCAG | 4 cut(s) | 243, 1279, 1469, 1525 |
| BspFNI | CGCG | 1 cut(s) | 122 |
| BspHI | TCATGA | 1 cut(s) | 1555 |
| BspLI | GGNNCC | 6 cut(s) | 201, 958, 1077, 1303, 1330, 1573 |
| BspMAI | CTGCAG | 2 cut(s) | 384, 1297 |
| BspPI | GGATC | 2 cut(s) | 1296, 1309 |
| BspQI | GCTCTTC | 1 cut(s) | 303 |
| BspT104I | TTCGAA | 3 cut(s) | 338, 848, 1777 |
| BspT107I | GGYRCC | 1 cut(s) | 956 |
| BspTI | CTTAAG | 1 cut(s) | 1637 |
| BsrBI | CCGCTC | 1 cut(s) | 567 |
| BsrDI | GCAATG | 1 cut(s) | 289 |
| BsrI | ACTGG | 4 cut(s) | 150, 992, 1205, 1724 |
| BssECI | CCNNGG | 5 cut(s) | 87, 306, 431, 867, 1307 |
| BssMI | GATC | 5 cut(s) | 28, 189, 507, 1301, 1756 |
| BssNI | GRCGYC | 1 cut(s) | 401 |
| BssSI | CACGAG | 1 cut(s) | 661 |
| BssT1I | CCWWGG | 1 cut(s) | 87 |
| Bst2BI | CACGAG | 1 cut(s) | 661 |
| Bst2UI | CCWGG | 1 cut(s) | 884 |
| Bst4CI | ACNGT | 5 cut(s) | 60, 590, 746, 907, 1225 |
| Bst6I | CTCTTC | 3 cut(s) | 303, 845, 967 |
| BstACI | GRCGYC | 1 cut(s) | 401 |
| BstAFI | CTTAAG | 1 cut(s) | 1637 |
| BstBI | TTCGAA | 3 cut(s) | 338, 848, 1777 |
| BstC8I | GCNNGC | 4 cut(s) | 131, 1284, 1622, 1632 |
| BstDEI | CTNAG | 7 cut(s) | 251, 776, 929, 1266, 1456, 1512, 1656 |
| BstDSI | CCRYGG | 2 cut(s) | 87, 1307 |
| BstF5I | GGATG | 5 cut(s) | 454, 535, 895, 1201, 1479 |
| BstFNI | CGCG | 1 cut(s) | 122 |
| BstHHI | GCGC | 2 cut(s) | 78, 387 |
| BstKTI | GATC | 5 cut(s) | 31, 192, 510, 1304, 1759 |
| BstMAI | GTCTC | 3 cut(s) | 69, 392, 1454 |
| BstMBI | GATC | 5 cut(s) | 28, 189, 507, 1301, 1756 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 119, 178, 1292, 1328, 1617 |
| BstNI | CCWGG | 1 cut(s) | 884 |
| BstNSI | RCATGY | 2 cut(s) | 1286, 1805 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 58 |
| BstSCI | CCNGG | 3 cut(s) | 430, 867, 882 |
| BstSFI | CTRYAG | 2 cut(s) | 380, 1293 |
| BstSLI | GKGCMC | 1 cut(s) | 1079 |
| BstUI | CGCG | 1 cut(s) | 122 |
| BstV1I | GCAGC | 5 cut(s) | 120, 394, 629, 1129, 1732 |
| BstV2I | GAAGAC | 1 cut(s) | 1319 |
| BstX2I | RGATCY | 1 cut(s) | 1301 |
| BstYI | RGATCY | 1 cut(s) | 1301 |
| BsuRI | GGCC | 3 cut(s) | 116, 430, 1077 |
| BtgI | CCRYGG | 2 cut(s) | 87, 1307 |
| BtgZI | GCGATG | 1 cut(s) | 426 |
| BtsCI | GGATG | 5 cut(s) | 454, 535, 895, 1201, 1479 |
| BtsI | GCAGTG | 1 cut(s) | 980 |
| BtsIMutI | CAGTG | 3 cut(s) | 143, 980, 1731 |
| Cac8I | GCNNGC | 4 cut(s) | 131, 1284, 1622, 1632 |
| CciI | TCATGA | 1 cut(s) | 1555 |
| CfoI | GCGC | 2 cut(s) | 78, 387 |
| Cfr13I | GGNCC | 4 cut(s) | 53, 428, 1075, 1076 |
| CseI | GACGC | 1 cut(s) | 409 |
| CsiI | ACCWGGT | 1 cut(s) | 882 |
| Csp6I | GTAC | 4 cut(s) | 531, 839, 1527, 1645 |
| CviAII | CATG | 8 cut(s) | 88, 787, 899, 1259, 1283, 1415, 1556, 1802 |
| CviQI | GTAC | 4 cut(s) | 531, 839, 1527, 1645 |
| DdeI | CTNAG | 7 cut(s) | 251, 776, 929, 1266, 1456, 1512, 1656 |
| DpnI | GATC | 5 cut(s) | 30, 191, 509, 1303, 1758 |
| DpnII | GATC | 5 cut(s) | 28, 189, 507, 1301, 1756 |
| DraIII | CACNNNGTG | 1 cut(s) | 123 |
| EaeI | YGGCCR | 1 cut(s) | 114 |
| Eam1104I | CTCTTC | 3 cut(s) | 303, 845, 967 |
| EarI | CTCTTC | 3 cut(s) | 303, 845, 967 |
| Eco130I | CCWWGG | 1 cut(s) | 87 |
| Eco24I | GRGCYC | 1 cut(s) | 1079 |
| Eco47I | GGWCC | 1 cut(s) | 53 |
| Eco57I | CTGAAG | 2 cut(s) | 702, 1167 |
| EcoRI | GAATTC | 2 cut(s) | 1577, 1744 |
| EcoRII | CCWGG | 1 cut(s) | 882 |
| EcoT14I | CCWWGG | 1 cut(s) | 87 |
| EcoT38I | GRGCYC | 1 cut(s) | 1079 |
| ErhI | CCWWGG | 1 cut(s) | 87 |
| Esp3I | CGTCTC | 2 cut(s) | 69, 392 |
| FaeI | CATG | 8 cut(s) | 91, 790, 902, 1262, 1286, 1418, 1559, 1805 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1586, 1618 |
| FaqI | GGGAC | 1 cut(s) | 869 |
| FatI | CATG | 8 cut(s) | 87, 786, 898, 1258, 1282, 1414, 1555, 1801 |
| FauI | CCCGC | 1 cut(s) | 142 |
| Fnu4HI | GCNGC | 7 cut(s) | 114, 134, 173, 383, 643, 1143, 1721 |
| FokI | GGATG | 5 cut(s) | 461, 522, 902, 1188, 1486 |
| FriOI | GRGCYC | 1 cut(s) | 1079 |
| Fsp4HI | GCNGC | 7 cut(s) | 114, 134, 173, 383, 643, 1143, 1721 |
| FspBI | CTAG | 3 cut(s) | 1649, 1688, 1736 |
| GlaI | GCGC | 2 cut(s) | 77, 386 |
| GluI | GCNGC | 7 cut(s) | 114, 134, 173, 383, 643, 1143, 1721 |
| GsaI | CCCAGC | 1 cut(s) | 1219 |
| HaeIII | GGCC | 3 cut(s) | 116, 430, 1077 |
| HapII | CCGG | 3 cut(s) | 404, 431, 869 |
| HgaI | GACGC | 1 cut(s) | 409 |
| HhaI | GCGC | 2 cut(s) | 78, 387 |
| Hin1I | GRCGYC | 1 cut(s) | 401 |
| Hin1II | CATG | 8 cut(s) | 91, 790, 902, 1262, 1286, 1418, 1559, 1805 |
| Hin6I | GCGC | 2 cut(s) | 76, 385 |
| HinP1I | GCGC | 2 cut(s) | 76, 385 |
| HpaII | CCGG | 3 cut(s) | 404, 431, 869 |
| HphI | GGTGA | 4 cut(s) | 27, 324, 1070, 1393 |
| Hpy166II | GTNNAC | 1 cut(s) | 1091 |
| Hpy188III | TCNNGA | 8 cut(s) | 203, 524, 553, 709, 1175, 1556, 1688, 1763 |
| Hpy8I | GTNNAC | 1 cut(s) | 1091 |
| Hpy99I | CGWCG | 3 cut(s) | 53, 64, 84 |
| HpyCH4III | ACNGT | 5 cut(s) | 60, 590, 746, 907, 1225 |
| HpyCH4V | TGCA | 8 cut(s) | 181, 382, 469, 683, 805, 1282, 1295, 1437 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 119, 178, 1292, 1328, 1617 |
| HpyF3I | CTNAG | 7 cut(s) | 251, 776, 929, 1266, 1456, 1512, 1656 |
| Hsp92I | GRCGYC | 1 cut(s) | 401 |
| Hsp92II | CATG | 8 cut(s) | 91, 790, 902, 1262, 1286, 1418, 1559, 1805 |
| HspAI | GCGC | 2 cut(s) | 76, 385 |
| Kzo9I | GATC | 5 cut(s) | 28, 189, 507, 1301, 1756 |
| LguI | GCTCTTC | 1 cut(s) | 303 |
| LmnI | GCTCC | 4 cut(s) | 205, 639, 1255, 1328 |
| Lsp1109I | GCAGC | 5 cut(s) | 120, 394, 629, 1129, 1732 |
| LweI | GCATC | 4 cut(s) | 356, 544, 584, 670 |
| MabI | ACCWGGT | 1 cut(s) | 882 |
| MaeI | CTAG | 3 cut(s) | 1649, 1688, 1736 |
| MaeIII | GTNAC | 3 cut(s) | 901, 1399, 1598 |
| MalI | GATC | 5 cut(s) | 30, 191, 509, 1303, 1758 |
| MbiI | CCGCTC | 1 cut(s) | 567 |
| MboI | GATC | 5 cut(s) | 28, 189, 507, 1301, 1756 |
| MfeI | CAATTG | 1 cut(s) | 1317 |
| MflI | RGATCY | 1 cut(s) | 1301 |
| MhlI | GDGCHC | 2 cut(s) | 1079, 1513 |
| MluCI | AATT | 7 cut(s) | 341, 780, 1317, 1577, 1730, 1744, 1786 |
| MlyI | GAGTC | 3 cut(s) | 1129, 1232, 1367 |
| MmeI | TCCRAC | 2 cut(s) | 999, 1107 |
| MroXI | GAANNNNTTC | 2 cut(s) | 375, 1744 |
| MseI | TTAA | 6 cut(s) | 11, 633, 1272, 1442, 1638, 1676 |
| MslI | CAYNNNNRTG | 3 cut(s) | 540, 791, 1383 |
| MspA1I | CMGCKG | 1 cut(s) | 1516 |
| MspCI | CTTAAG | 1 cut(s) | 1637 |
| MspI | CCGG | 3 cut(s) | 404, 431, 869 |
| MspR9I | CCNGG | 3 cut(s) | 432, 869, 884 |
| MunI | CAATTG | 1 cut(s) | 1317 |
| Mva1269I | GAATGC | 1 cut(s) | 413 |
| MvaI | CCWGG | 1 cut(s) | 884 |
| MvnI | CGCG | 1 cut(s) | 122 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 119, 178, 1292, 1328, 1617 |
| NciI | CCSGG | 2 cut(s) | 432, 869 |
| NcoI | CCATGG | 1 cut(s) | 87 |
| NdeII | GATC | 5 cut(s) | 28, 189, 507, 1301, 1756 |
| NlaIII | CATG | 8 cut(s) | 91, 790, 902, 1262, 1286, 1418, 1559, 1805 |
| NlaIV | GGNNCC | 6 cut(s) | 201, 958, 1077, 1303, 1330, 1573 |
| NmeAIII | GCCGAG | 1 cut(s) | 287 |
| NmuCI | GTSAC | 1 cut(s) | 1399 |
| NspI | RCATGY | 2 cut(s) | 1286, 1805 |
| NspV | TTCGAA | 3 cut(s) | 338, 848, 1777 |
| PaeI | GCATGC | 1 cut(s) | 1286 |
| PagI | TCATGA | 1 cut(s) | 1555 |
| PciSI | GCTCTTC | 1 cut(s) | 303 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 189 |
| PctI | GAATGC | 1 cut(s) | 413 |
| PdmI | GAANNNNTTC | 2 cut(s) | 375, 1744 |
| PfeI | GAWTC | 8 cut(s) | 153, 515, 520, 761, 770, 796, 914, 1652 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 123 |
| PkrI | GCNGC | 7 cut(s) | 115, 135, 174, 384, 644, 1144, 1722 |
| PleI | GAGTC | 3 cut(s) | 1128, 1232, 1366 |
| PpsI | GAGTC | 3 cut(s) | 1128, 1232, 1366 |
| PshAI | GACNNNNGTC | 1 cut(s) | 58 |
| Psp6I | CCWGG | 1 cut(s) | 882 |
| PspFI | CCCAGC | 1 cut(s) | 1215 |
| PspGI | CCWGG | 1 cut(s) | 882 |
| PspN4I | GGNNCC | 6 cut(s) | 201, 958, 1077, 1303, 1330, 1573 |
| PspOMI | GGGCCC | 1 cut(s) | 1075 |
| PspPI | GGNCC | 4 cut(s) | 53, 428, 1075, 1076 |
| PstI | CTGCAG | 2 cut(s) | 384, 1297 |
| PsuI | RGATCY | 1 cut(s) | 1301 |
| PvuII | CAGCTG | 1 cut(s) | 1516 |
| RsaI | GTAC | 4 cut(s) | 532, 840, 1528, 1646 |
| RsaNI | GTAC | 4 cut(s) | 531, 839, 1527, 1645 |
| RseI | CAYNNNNRTG | 3 cut(s) | 540, 791, 1383 |
| SapI | GCTCTTC | 1 cut(s) | 303 |
| SaqAI | TTAA | 6 cut(s) | 11, 633, 1272, 1442, 1638, 1676 |
| SatI | GCNGC | 7 cut(s) | 114, 134, 173, 383, 643, 1143, 1721 |
| Sau3AI | GATC | 5 cut(s) | 28, 189, 507, 1301, 1756 |
| Sau96I | GGNCC | 4 cut(s) | 53, 428, 1075, 1076 |
| SchI | GAGTC | 3 cut(s) | 1129, 1232, 1367 |
| ScrFI | CCNGG | 3 cut(s) | 432, 869, 884 |
| SduI | GDGCHC | 2 cut(s) | 1079, 1513 |
| SexAI | ACCWGGT | 1 cut(s) | 882 |
| SfaNI | GCATC | 4 cut(s) | 356, 544, 584, 670 |
| SfcI | CTRYAG | 2 cut(s) | 380, 1293 |
| SfuI | TTCGAA | 3 cut(s) | 338, 848, 1777 |
| SinI | GGWCC | 1 cut(s) | 53 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 540, 791, 1383 |
| SmlI | CTYRAG | 1 cut(s) | 1637 |
| SmoI | CTYRAG | 1 cut(s) | 1637 |
| SphI | GCATGC | 1 cut(s) | 1286 |
| Sse9I | AATT | 7 cut(s) | 341, 780, 1317, 1577, 1730, 1744, 1786 |
| SsiI | CCGC | 5 cut(s) | 113, 120, 149, 173, 567 |
| SspI | AATATT | 1 cut(s) | 1486 |
| SspMI | CTAG | 3 cut(s) | 1649, 1688, 1736 |
| StyD4I | CCNGG | 3 cut(s) | 430, 867, 882 |
| StyI | CCWWGG | 1 cut(s) | 87 |
| TaaI | ACNGT | 5 cut(s) | 60, 590, 746, 907, 1225 |
| TaqI | TCGA | 8 cut(s) | 48, 192, 338, 351, 518, 655, 848, 1777 |
| TasI | AATT | 7 cut(s) | 341, 780, 1317, 1577, 1730, 1744, 1786 |
| TatI | WGTACW | 2 cut(s) | 838, 1526 |
| TauI | GCSGC | 2 cut(s) | 116, 175 |
| TfiI | GAWTC | 8 cut(s) | 153, 515, 520, 761, 770, 796, 914, 1652 |
| Tru1I | TTAA | 6 cut(s) | 11, 633, 1272, 1442, 1638, 1676 |
| Tru9I | TTAA | 6 cut(s) | 11, 633, 1272, 1442, 1638, 1676 |
| TscAI | CASTG | 3 cut(s) | 150, 980, 1731 |
| TseFI | GTSAC | 1 cut(s) | 1399 |
| TseI | GCWGC | 5 cut(s) | 133, 382, 642, 1142, 1720 |
| Tsp45I | GTSAC | 1 cut(s) | 1399 |
| TspGWI | ACGGA | 4 cut(s) | 66, 437, 528, 1324 |
| TspRI | CASTG | 3 cut(s) | 150, 980, 1731 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 123 |
| Vha464I | CTTAAG | 1 cut(s) | 1637 |
| VpaK11BI | GGWCC | 1 cut(s) | 53 |
| XapI | RAATTY | 5 cut(s) | 341, 1577, 1730, 1744, 1786 |
| XbaI | TCTAGA | 1 cut(s) | 1687 |
| XceI | RCATGY | 2 cut(s) | 1286, 1805 |
| XmnI | GAANNNNTTC | 2 cut(s) | 375, 1744 |
| XspI | CTAG | 3 cut(s) | 1649, 1688, 1736 |