PHD zinc finger
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Myb_DNA-binding | PF00249 | 953 - 1006 | 2.9e-06 | Myb-like DNA-binding domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 36, 2683 |
| AccBSI | CCGCTC | 1 cut(s) | 468 |
| AciI | CCGC | 5 cut(s) | 440, 468, 810, 1139, 1745 |
| AclWI | GGATC | 8 cut(s) | 612, 625, 930, 1196, 1209, 1750, 1917, 1930 |
| AcoI | YGGCCR | 1 cut(s) | 1195 |
| AcsI | RAATTY | 5 cut(s) | 308, 735, 1846, 2906, 2954 |
| AcuI | CTGAAG | 4 cut(s) | 936, 1026, 1371, 1595 |
| AcyI | GRCGYC | 1 cut(s) | 2443 |
| AfaI | GTAC | 7 cut(s) | 957, 1137, 1576, 2123, 2601, 2682, 2986 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 36, 746, 1234, 1275, 2176, 2353, 2683 |
| AflII | CTTAAG | 2 cut(s) | 2788, 2999 |
| AflIII | ACRYGT | 3 cut(s) | 781, 1577, 2488 |
| AgsI | TTSAA | 9 cut(s) | 53, 343, 403, 671, 1536, 1619, 2279, 2912, 2954 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2575 |
| AjiI | CACGTC | 1 cut(s) | 2070 |
| AjnI | CCWGG | 1 cut(s) | 1204 |
| AluBI | AGCT | 9 cut(s) | 249, 537, 674, 1615, 1960, 2282, 2606, 2744, 2827 |
| AluI | AGCT | 9 cut(s) | 249, 537, 674, 1615, 1960, 2282, 2606, 2744, 2827 |
| Alw21I | GWGCWC | 3 cut(s) | 372, 550, 1962 |
| Alw26I | GTCTC | 4 cut(s) | 266, 293, 1979, 2641 |
| Alw44I | GTGCAC | 1 cut(s) | 368 |
| AlwI | GGATC | 8 cut(s) | 612, 625, 930, 1196, 1209, 1750, 1917, 1930 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 794, 1670 |
| Ama87I | CYCGRG | 1 cut(s) | 960 |
| AoxI | GGCC | 5 cut(s) | 55, 1195, 1428, 2656, 2980 |
| ApaLI | GTGCAC | 1 cut(s) | 368 |
| ApeKI | GCWGC | 7 cut(s) | 380, 537, 875, 1640, 2030, 2764, 2767 |
| ApoI | RAATTY | 5 cut(s) | 308, 735, 1846, 2906, 2954 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1846 |
| AspLEI | GCGC | 1 cut(s) | 337 |
| AspS9I | GGNCC | 5 cut(s) | 19, 329, 1428, 1742, 2546 |
| AsuC2I | CCSGG | 1 cut(s) | 1199 |
| AsuHPI | GGTGA | 5 cut(s) | 119, 1079, 1232, 2621, 2702 |
| AsuII | TTCGAA | 1 cut(s) | 1796 |
| AvaI | CYCGRG | 1 cut(s) | 960 |
| AvaII | GGWCC | 4 cut(s) | 19, 329, 1742, 2546 |
| BaeGI | GKGCMC | 1 cut(s) | 372 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 939, 972 |
| BamHI | GGATCC | 3 cut(s) | 617, 1201, 1922 |
| BanII | GRGCYC | 1 cut(s) | 1962 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1516, 1548 |
| Bbv12I | GWGCWC | 3 cut(s) | 372, 550, 1962 |
| BbvCI | CCTCAGC | 1 cut(s) | 2203 |
| BbvI | GCAGC | 7 cut(s) | 367, 524, 862, 1627, 2017, 2776, 2779 |
| BceAI | ACGGC | 1 cut(s) | 2967 |
| BciT130I | CCWGG | 1 cut(s) | 1206 |
| BciVI | GTATCC | 1 cut(s) | 958 |
| BclI | TGATCA | 2 cut(s) | 130, 2692 |
| BcnI | CCSGG | 1 cut(s) | 1199 |
| BcoDI | GTCTC | 4 cut(s) | 266, 293, 1979, 2641 |
| BfaI | CTAG | 4 cut(s) | 1064, 2073, 2283, 2397 |
| BfmI | CTRYAG | 2 cut(s) | 541, 1308 |
| BfoI | RGCGCY | 1 cut(s) | 338 |
| BfrI | CTTAAG | 2 cut(s) | 2788, 2999 |
| BfuI | GTATCC | 1 cut(s) | 958 |
| BglII | AGATCT | 1 cut(s) | 2057 |
| BisI | GCNGC | 8 cut(s) | 381, 538, 811, 876, 1641, 2031, 2765, 2768 |
| BlsI | GCNGC | 8 cut(s) | 382, 539, 812, 877, 1642, 2032, 2766, 2769 |
| BmcAI | AGTACT | 1 cut(s) | 2682 |
| Bme1390I | CCNGG | 2 cut(s) | 1199, 1206 |
| Bme18I | GGWCC | 4 cut(s) | 19, 329, 1742, 2546 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2575 |
| BmeT110I | CYCGRG | 1 cut(s) | 960 |
| BmgBI | CACGTC | 1 cut(s) | 2070 |
| BmgT120I | GGNCC | 5 cut(s) | 19, 329, 1428, 1742, 2546 |
| BmiI | GGNNCC | 6 cut(s) | 433, 619, 1203, 1924, 2358, 2859 |
| BmrFI | CCNGG | 2 cut(s) | 1199, 1206 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2096 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2791, 2823 |
| BpmI | CTGGAG | 1 cut(s) | 1629 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2203 |
| Bpu14I | TTCGAA | 1 cut(s) | 1796 |
| BpuEI | CTTGAG | 4 cut(s) | 475, 1527, 2074, 2873 |
| BpuMI | CCSGG | 1 cut(s) | 1199 |
| BsaHI | GRCGYC | 1 cut(s) | 2443 |
| BsaJI | CCNNGG | 4 cut(s) | 959, 2734, 2861, 2936 |
| BsaWI | WCCGGW | 1 cut(s) | 304 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2706, 2736 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 36, 746, 1234, 1275, 2176, 2353, 2683 |
| Bse118I | RCCGGY | 1 cut(s) | 331 |
| Bse1I | ACTGG | 6 cut(s) | 788, 1364, 2195, 2512, 2688, 2703 |
| Bse3DI | GCAATG | 8 cut(s) | 30, 840, 1030, 1183, 1198, 1754, 1938, 2923 |
| BseBI | CCWGG | 1 cut(s) | 1206 |
| BseDI | CCNNGG | 4 cut(s) | 959, 2734, 2861, 2936 |
| BseGI | GGATG | 7 cut(s) | 213, 436, 697, 1148, 1291, 1444, 1564 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 36, 746, 1234, 1275, 2176, 2353, 2683 |
| BseMI | GCAATG | 8 cut(s) | 30, 840, 1030, 1183, 1198, 1754, 1938, 2923 |
| BseMII | CTCAG | 4 cut(s) | 588, 2217, 2631, 2852 |
| BseNI | ACTGG | 6 cut(s) | 788, 1364, 2195, 2512, 2688, 2703 |
| BseRI | GAGGAG | 1 cut(s) | 1050 |
| BseSI | GKGCMC | 1 cut(s) | 372 |
| BseXI | GCAGC | 7 cut(s) | 367, 524, 862, 1627, 2017, 2776, 2779 |
| BseYI | CCCAGC | 5 cut(s) | 1074, 1656, 1836, 1926, 2823 |
| BsgI | GTGCAG | 3 cut(s) | 2783, 2803, 2921 |
| BshFI | GGCC | 5 cut(s) | 57, 1197, 1430, 2658, 2982 |
| BsiHKAI | GWGCWC | 3 cut(s) | 372, 550, 1962 |
| BsiHKCI | CYCGRG | 1 cut(s) | 960 |
| BsiSI | CCGG | 3 cut(s) | 305, 332, 1198 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 36, 746, 1234, 1275, 2176, 2353, 2683 |
| BsmAI | GTCTC | 4 cut(s) | 266, 293, 1979, 2641 |
| BsmI | GAATGC | 1 cut(s) | 2937 |
| BsnI | GGCC | 5 cut(s) | 57, 1197, 1430, 2658, 2982 |
| BsoBI | CYCGRG | 1 cut(s) | 960 |
| Bsp119I | TTCGAA | 1 cut(s) | 1796 |
| Bsp1286I | GDGCHC | 3 cut(s) | 372, 550, 1962 |
| Bsp143I | GATC | 8 cut(s) | 130, 617, 922, 1201, 1755, 1922, 2057, 2692 |
| Bsp19I | CCATGG | 2 cut(s) | 2861, 2936 |
| BspACI | CCGC | 5 cut(s) | 440, 468, 810, 1139, 1745 |
| BspANI | GGCC | 5 cut(s) | 57, 1197, 1430, 2658, 2982 |
| BspCNI | CTCAG | 4 cut(s) | 587, 2216, 2632, 2851 |
| BspHI | TCATGA | 4 cut(s) | 1444, 2011, 2077, 2182 |
| BspLI | GGNNCC | 6 cut(s) | 433, 619, 1203, 1924, 2358, 2859 |
| BspPI | GGATC | 8 cut(s) | 612, 625, 930, 1196, 1209, 1750, 1917, 1930 |
| BspQI | GCTCTTC | 1 cut(s) | 2445 |
| BspT104I | TTCGAA | 1 cut(s) | 1796 |
| BspTI | CTTAAG | 2 cut(s) | 2788, 2999 |
| BsrBI | CCGCTC | 1 cut(s) | 468 |
| BsrDI | GCAATG | 8 cut(s) | 30, 840, 1030, 1183, 1198, 1754, 1938, 2923 |
| BsrFI | RCCGGY | 1 cut(s) | 331 |
| BsrI | ACTGG | 6 cut(s) | 788, 1364, 2195, 2512, 2688, 2703 |
| BssAI | RCCGGY | 1 cut(s) | 331 |
| BssECI | CCNNGG | 4 cut(s) | 959, 2734, 2861, 2936 |
| BssMI | GATC | 8 cut(s) | 130, 617, 922, 1201, 1755, 1922, 2057, 2692 |
| BssNI | GRCGYC | 1 cut(s) | 2443 |
| BssT1I | CCWWGG | 3 cut(s) | 2734, 2861, 2936 |
| Bst2UI | CCWGG | 1 cut(s) | 1206 |
| Bst4CI | ACNGT | 9 cut(s) | 277, 408, 711, 866, 1305, 1666, 2126, 2348, 2869 |
| Bst6I | CTCTTC | 5 cut(s) | 408, 745, 2362, 2445, 2874 |
| BstACI | GRCGYC | 1 cut(s) | 2443 |
| BstAFI | CTTAAG | 2 cut(s) | 2788, 2999 |
| BstBI | TTCGAA | 1 cut(s) | 1796 |
| BstC8I | GCNNGC | 4 cut(s) | 444, 2046, 2656, 2829 |
| BstDSI | CCRYGG | 2 cut(s) | 2861, 2936 |
| BstF5I | GGATG | 7 cut(s) | 213, 436, 697, 1148, 1291, 1444, 1564 |
| BstH2I | RGCGCY | 1 cut(s) | 338 |
| BstHHI | GCGC | 1 cut(s) | 337 |
| BstKTI | GATC | 8 cut(s) | 133, 620, 925, 1204, 1758, 1925, 2060, 2695 |
| BstMAI | GTCTC | 4 cut(s) | 266, 293, 1979, 2641 |
| BstMBI | GATC | 8 cut(s) | 130, 617, 922, 1201, 1755, 1922, 2057, 2692 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 332, 2941 |
| BstNI | CCWGG | 1 cut(s) | 1206 |
| BstNSI | RCATGY | 5 cut(s) | 446, 785, 1581, 2048, 2492 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2096 |
| BstSCI | CCNGG | 2 cut(s) | 1197, 1204 |
| BstSFI | CTRYAG | 2 cut(s) | 541, 1308 |
| BstSLI | GKGCMC | 1 cut(s) | 372 |
| BstV1I | GCAGC | 7 cut(s) | 367, 524, 862, 1627, 2017, 2776, 2779 |
| BstX2I | RGATCY | 5 cut(s) | 617, 1201, 1755, 1922, 2057 |
| BstYI | RGATCY | 5 cut(s) | 617, 1201, 1755, 1922, 2057 |
| BsuI | GTATCC | 1 cut(s) | 958 |
| BsuRI | GGCC | 5 cut(s) | 57, 1197, 1430, 2658, 2982 |
| BtgI | CCRYGG | 2 cut(s) | 2861, 2936 |
| BtrI | CACGTC | 1 cut(s) | 2070 |
| BtsCI | GGATG | 7 cut(s) | 213, 436, 697, 1148, 1291, 1444, 1564 |
| BtsI | GCAGTG | 2 cut(s) | 907, 1692 |
| BtsIMutI | CAGTG | 7 cut(s) | 871, 907, 1671, 1690, 1692, 1879, 2565 |
| Cac8I | GCNNGC | 4 cut(s) | 444, 2046, 2656, 2829 |
| CaiI | CAGNNNCTG | 2 cut(s) | 794, 1670 |
| CciI | TCATGA | 4 cut(s) | 1444, 2011, 2077, 2182 |
| CfoI | GCGC | 1 cut(s) | 337 |
| Cfr10I | RCCGGY | 1 cut(s) | 331 |
| Cfr13I | GGNCC | 5 cut(s) | 19, 329, 1428, 1742, 2546 |
| CseI | GACGC | 2 cut(s) | 867, 2432 |
| Csp6I | GTAC | 7 cut(s) | 956, 1136, 1575, 2122, 2600, 2681, 2985 |
| CviQI | GTAC | 7 cut(s) | 956, 1136, 1575, 2122, 2600, 2681, 2985 |
| DpnI | GATC | 8 cut(s) | 132, 619, 924, 1203, 1757, 1924, 2059, 2694 |
| DpnII | GATC | 8 cut(s) | 130, 617, 922, 1201, 1755, 1922, 2057, 2692 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2575 |
| EaeI | YGGCCR | 1 cut(s) | 1195 |
| Eam1104I | CTCTTC | 5 cut(s) | 408, 745, 2362, 2445, 2874 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2575 |
| EarI | CTCTTC | 5 cut(s) | 408, 745, 2362, 2445, 2874 |
| Ecl136II | GAGCTC | 1 cut(s) | 1960 |
| Eco130I | CCWWGG | 3 cut(s) | 2734, 2861, 2936 |
| Eco147I | AGGCCT | 2 cut(s) | 57, 2658 |
| Eco24I | GRGCYC | 1 cut(s) | 1962 |
| Eco47I | GGWCC | 4 cut(s) | 19, 329, 1742, 2546 |
| Eco53kI | GAGCTC | 1 cut(s) | 1960 |
| Eco57I | CTGAAG | 4 cut(s) | 936, 1026, 1371, 1595 |
| Eco88I | CYCGRG | 1 cut(s) | 960 |
| EcoICRI | GAGCTC | 1 cut(s) | 1960 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1428 |
| EcoRI | GAATTC | 1 cut(s) | 1846 |
| EcoRII | CCWGG | 1 cut(s) | 1204 |
| EcoT14I | CCWWGG | 3 cut(s) | 2734, 2861, 2936 |
| EcoT22I | ATGCAT | 1 cut(s) | 2323 |
| EcoT38I | GRGCYC | 1 cut(s) | 1962 |
| ErhI | CCWWGG | 3 cut(s) | 2734, 2861, 2936 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2213, 2245 |
| FauNDI | CATATG | 4 cut(s) | 135, 700, 2251, 3020 |
| FbaI | TGATCA | 2 cut(s) | 130, 2692 |
| Fnu4HI | GCNGC | 8 cut(s) | 381, 538, 811, 876, 1641, 2031, 2765, 2768 |
| FokI | GGATG | 7 cut(s) | 220, 423, 704, 1135, 1298, 1451, 1571 |
| FriOI | GRGCYC | 1 cut(s) | 1962 |
| Fsp4HI | GCNGC | 8 cut(s) | 381, 538, 811, 876, 1641, 2031, 2765, 2768 |
| FspBI | CTAG | 4 cut(s) | 1064, 2073, 2283, 2397 |
| GlaI | GCGC | 1 cut(s) | 336 |
| GluI | GCNGC | 8 cut(s) | 381, 538, 811, 876, 1641, 2031, 2765, 2768 |
| GsaI | CCCAGC | 5 cut(s) | 1078, 1660, 1840, 1930, 2827 |
| GsuI | CTGGAG | 1 cut(s) | 1629 |
| HaeII | RGCGCY | 1 cut(s) | 338 |
| HaeIII | GGCC | 5 cut(s) | 57, 1197, 1430, 2658, 2982 |
| HapII | CCGG | 3 cut(s) | 305, 332, 1198 |
| HgaI | GACGC | 2 cut(s) | 867, 2432 |
| HhaI | GCGC | 1 cut(s) | 337 |
| Hin1I | GRCGYC | 1 cut(s) | 2443 |
| Hin6I | GCGC | 1 cut(s) | 335 |
| HinP1I | GCGC | 1 cut(s) | 335 |
| HincII | GTYRAC | 2 cut(s) | 1571, 2731 |
| HindII | GTYRAC | 2 cut(s) | 1571, 2731 |
| HpaII | CCGG | 3 cut(s) | 305, 332, 1198 |
| HphI | GGTGA | 5 cut(s) | 119, 1079, 1232, 2621, 2702 |
| Hpy166II | GTNNAC | 5 cut(s) | 370, 1025, 1571, 1877, 2731 |
| Hpy8I | GTNNAC | 5 cut(s) | 370, 1025, 1571, 1877, 2731 |
| HpyCH4III | ACNGT | 9 cut(s) | 277, 408, 711, 866, 1305, 1666, 2126, 2348, 2869 |
| HpyCH4IV | ACGT | 4 cut(s) | 770, 1573, 2069, 2197 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 332, 2941 |
| HpySE526I | ACGT | 4 cut(s) | 770, 1573, 2069, 2197 |
| Hsp92I | GRCGYC | 1 cut(s) | 2443 |
| HspAI | GCGC | 1 cut(s) | 335 |
| Ksp22I | TGATCA | 2 cut(s) | 130, 2692 |
| Kzo9I | GATC | 8 cut(s) | 130, 617, 922, 1201, 1755, 1922, 2057, 2692 |
| LguI | GCTCTTC | 1 cut(s) | 2445 |
| LmnI | GCTCC | 4 cut(s) | 437, 1063, 1648, 2799 |
| Lsp1109I | GCAGC | 7 cut(s) | 367, 524, 862, 1627, 2017, 2776, 2779 |
| MaeI | CTAG | 4 cut(s) | 1064, 2073, 2283, 2397 |
| MaeII | ACGT | 4 cut(s) | 770, 1573, 2069, 2197 |
| MaeIII | GTNAC | 5 cut(s) | 860, 1385, 2089, 2098, 2225 |
| MalI | GATC | 8 cut(s) | 132, 619, 924, 1203, 1757, 1924, 2059, 2694 |
| MbiI | CCGCTC | 1 cut(s) | 468 |
| MboI | GATC | 8 cut(s) | 130, 617, 922, 1201, 1755, 1922, 2057, 2692 |
| MflI | RGATCY | 5 cut(s) | 617, 1201, 1755, 1922, 2057 |
| MhlI | GDGCHC | 3 cut(s) | 372, 550, 1962 |
| MlyI | GAGTC | 6 cut(s) | 425, 1469, 1513, 1988, 2379, 2830 |
| MmeI | TCCRAC | 4 cut(s) | 390, 971, 1491, 2344 |
| Mph1103I | ATGCAT | 1 cut(s) | 2323 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1846 |
| MslI | CAYNNNNRTG | 4 cut(s) | 441, 447, 1535, 2493 |
| MspA1I | CMGCKG | 2 cut(s) | 2606, 2827 |
| MspCI | CTTAAG | 2 cut(s) | 2788, 2999 |
| MspI | CCGG | 3 cut(s) | 305, 332, 1198 |
| MspR9I | CCNGG | 2 cut(s) | 1199, 1206 |
| Mva1269I | GAATGC | 1 cut(s) | 2937 |
| MvaI | CCWGG | 1 cut(s) | 1206 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 332, 2941 |
| NciI | CCSGG | 1 cut(s) | 1199 |
| NcoI | CCATGG | 2 cut(s) | 2861, 2936 |
| NdeI | CATATG | 4 cut(s) | 135, 700, 2251, 3020 |
| NdeII | GATC | 8 cut(s) | 130, 617, 922, 1201, 1755, 1922, 2057, 2692 |
| NlaIV | GGNNCC | 6 cut(s) | 433, 619, 1203, 1924, 2358, 2859 |
| NmuCI | GTSAC | 4 cut(s) | 860, 1385, 2089, 2098 |
| NsiI | ATGCAT | 1 cut(s) | 2323 |
| NspI | RCATGY | 5 cut(s) | 446, 785, 1581, 2048, 2492 |
| NspV | TTCGAA | 1 cut(s) | 1796 |
| PaeI | GCATGC | 2 cut(s) | 446, 2048 |
| PagI | TCATGA | 4 cut(s) | 1444, 2011, 2077, 2182 |
| PceI | AGGCCT | 2 cut(s) | 57, 2658 |
| PciI | ACATGT | 3 cut(s) | 781, 1577, 2488 |
| PciSI | GCTCTTC | 1 cut(s) | 2445 |
| PctI | GAATGC | 1 cut(s) | 2937 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1846 |
| PfeI | GAWTC | 8 cut(s) | 421, 650, 1098, 1160, 1343, 1652, 1883, 2081 |
| PflFI | GACNNNGTC | 1 cut(s) | 2839 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 36, 2683 |
| PfoI | TCCNGGA | 1 cut(s) | 1204 |
| PkrI | GCNGC | 8 cut(s) | 382, 539, 812, 877, 1642, 2032, 2766, 2769 |
| PleI | GAGTC | 6 cut(s) | 424, 1468, 1512, 1987, 2378, 2830 |
| PpsI | GAGTC | 6 cut(s) | 424, 1468, 1512, 1987, 2378, 2830 |
| PscI | ACATGT | 3 cut(s) | 781, 1577, 2488 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2096 |
| Psp124BI | GAGCTC | 1 cut(s) | 1962 |
| Psp6I | CCWGG | 1 cut(s) | 1204 |
| PspFI | CCCAGC | 5 cut(s) | 1074, 1656, 1836, 1926, 2823 |
| PspGI | CCWGG | 1 cut(s) | 1204 |
| PspN4I | GGNNCC | 6 cut(s) | 433, 619, 1203, 1924, 2358, 2859 |
| PspPI | GGNCC | 5 cut(s) | 19, 329, 1428, 1742, 2546 |
| PstNI | CAGNNNCTG | 2 cut(s) | 794, 1670 |
| PsuI | RGATCY | 5 cut(s) | 617, 1201, 1755, 1922, 2057 |
| PsyI | GACNNNGTC | 1 cut(s) | 2839 |
| PvuII | CAGCTG | 2 cut(s) | 2606, 2827 |
| RsaI | GTAC | 7 cut(s) | 957, 1137, 1576, 2123, 2601, 2682, 2986 |
| RsaNI | GTAC | 7 cut(s) | 956, 1136, 1575, 2122, 2600, 2681, 2985 |
| RseI | CAYNNNNRTG | 4 cut(s) | 441, 447, 1535, 2493 |
| SacI | GAGCTC | 1 cut(s) | 1962 |
| SapI | GCTCTTC | 1 cut(s) | 2445 |
| SatI | GCNGC | 8 cut(s) | 381, 538, 811, 876, 1641, 2031, 2765, 2768 |
| Sau3AI | GATC | 8 cut(s) | 130, 617, 922, 1201, 1755, 1922, 2057, 2692 |
| Sau96I | GGNCC | 5 cut(s) | 19, 329, 1428, 1742, 2546 |
| ScaI | AGTACT | 1 cut(s) | 2682 |
| SchI | GAGTC | 6 cut(s) | 425, 1469, 1513, 1988, 2379, 2830 |
| ScrFI | CCNGG | 2 cut(s) | 1199, 1206 |
| SduI | GDGCHC | 3 cut(s) | 372, 550, 1962 |
| SfcI | CTRYAG | 2 cut(s) | 541, 1308 |
| SfuI | TTCGAA | 1 cut(s) | 1796 |
| SinI | GGWCC | 4 cut(s) | 19, 329, 1742, 2546 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 441, 447, 1535, 2493 |
| SmlI | CTYRAG | 6 cut(s) | 454, 1542, 2053, 2788, 2888, 2999 |
| SmoI | CTYRAG | 6 cut(s) | 454, 1542, 2053, 2788, 2888, 2999 |
| SphI | GCATGC | 2 cut(s) | 446, 2048 |
| SseBI | AGGCCT | 2 cut(s) | 57, 2658 |
| SsiI | CCGC | 5 cut(s) | 440, 468, 810, 1139, 1745 |
| SspI | AATATT | 2 cut(s) | 2524, 2949 |
| SspMI | CTAG | 4 cut(s) | 1064, 2073, 2283, 2397 |
| SstI | GAGCTC | 1 cut(s) | 1962 |
| StuI | AGGCCT | 2 cut(s) | 57, 2658 |
| StyD4I | CCNGG | 2 cut(s) | 1197, 1204 |
| StyI | CCWWGG | 3 cut(s) | 2734, 2861, 2936 |
| TaaI | ACNGT | 9 cut(s) | 277, 408, 711, 866, 1305, 1666, 2126, 2348, 2869 |
| TaiI | ACGT | 4 cut(s) | 773, 1576, 2072, 2200 |
| TaqI | TCGA | 3 cut(s) | 419, 1796, 3041 |
| TatI | WGTACW | 2 cut(s) | 2121, 2680 |
| TauI | GCSGC | 1 cut(s) | 813 |
| TfiI | GAWTC | 8 cut(s) | 421, 650, 1098, 1160, 1343, 1652, 1883, 2081 |
| TscAI | CASTG | 7 cut(s) | 871, 907, 1671, 1690, 1699, 1879, 2572 |
| TseFI | GTSAC | 4 cut(s) | 860, 1385, 2089, 2098 |
| TseI | GCWGC | 7 cut(s) | 380, 537, 875, 1640, 2030, 2764, 2767 |
| Tsp45I | GTSAC | 4 cut(s) | 860, 1385, 2089, 2098 |
| TspGWI | ACGGA | 1 cut(s) | 110 |
| TspRI | CASTG | 7 cut(s) | 871, 907, 1671, 1690, 1699, 1879, 2572 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2839 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 36, 2683 |
| Vha464I | CTTAAG | 2 cut(s) | 2788, 2999 |
| VneI | GTGCAC | 1 cut(s) | 368 |
| VpaK11BI | GGWCC | 4 cut(s) | 19, 329, 1742, 2546 |
| XapI | RAATTY | 5 cut(s) | 308, 735, 1846, 2906, 2954 |
| XceI | RCATGY | 5 cut(s) | 446, 785, 1581, 2048, 2492 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1960 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1846 |
| XspI | CTAG | 4 cut(s) | 1064, 2073, 2283, 2397 |
| ZrmI | AGTACT | 1 cut(s) | 2682 |
| Zsp2I | ATGCAT | 1 cut(s) | 2323 |