PHD zinc finger
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 272 |
| AciI | CCGC | 1 cut(s) | 116 |
| AgsI | TTSAA | 2 cut(s) | 165, 262 |
| AluBI | AGCT | 2 cut(s) | 27, 146 |
| AluI | AGCT | 2 cut(s) | 27, 146 |
| Alw26I | GTCTC | 1 cut(s) | 204 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 101 |
| ApeKI | GCWGC | 3 cut(s) | 59, 101, 125 |
| AspLEI | GCGC | 3 cut(s) | 110, 202, 273 |
| AsuC2I | CCSGG | 1 cut(s) | 204 |
| BbvI | GCAGC | 3 cut(s) | 46, 88, 112 |
| BcnI | CCSGG | 1 cut(s) | 204 |
| BcoDI | GTCTC | 1 cut(s) | 204 |
| BfmI | CTRYAG | 1 cut(s) | 102 |
| BfoI | RGCGCY | 2 cut(s) | 111, 203 |
| BisI | GCNGC | 3 cut(s) | 60, 102, 126 |
| BlsI | GCNGC | 3 cut(s) | 61, 103, 127 |
| Bme1390I | CCNGG | 1 cut(s) | 204 |
| BmrFI | CCNGG | 1 cut(s) | 204 |
| BpuMI | CCSGG | 1 cut(s) | 204 |
| BsaI | GGTCTC | 1 cut(s) | 204 |
| Bse1I | ACTGG | 1 cut(s) | 69 |
| BseMII | CTCAG | 1 cut(s) | 69 |
| BseNI | ACTGG | 1 cut(s) | 69 |
| BseXI | GCAGC | 3 cut(s) | 46, 88, 112 |
| BsiSI | CCGG | 1 cut(s) | 204 |
| BslFI | GGGAC | 2 cut(s) | 132, 242 |
| BsmAI | GTCTC | 1 cut(s) | 204 |
| BsmFI | GGGAC | 2 cut(s) | 132, 242 |
| Bso31I | GGTCTC | 1 cut(s) | 204 |
| BspACI | CCGC | 1 cut(s) | 116 |
| BspCNI | CTCAG | 1 cut(s) | 70 |
| BspMAI | CTGCAG | 1 cut(s) | 106 |
| BspTNI | GGTCTC | 1 cut(s) | 204 |
| BsrI | ACTGG | 1 cut(s) | 69 |
| Bst6I | CTCTTC | 1 cut(s) | 202 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 101 |
| BstC8I | GCNNGC | 1 cut(s) | 106 |
| BstDEI | CTNAG | 1 cut(s) | 78 |
| BstH2I | RGCGCY | 2 cut(s) | 111, 203 |
| BstHHI | GCGC | 3 cut(s) | 110, 202, 273 |
| BstMAI | GTCTC | 1 cut(s) | 204 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 24, 101, 107, 122, 131 |
| BstSCI | CCNGG | 1 cut(s) | 202 |
| BstSFI | CTRYAG | 1 cut(s) | 102 |
| BstV1I | GCAGC | 3 cut(s) | 46, 88, 112 |
| BtsIMutI | CAGTG | 1 cut(s) | 76 |
| Cac8I | GCNNGC | 1 cut(s) | 106 |
| CaiI | CAGNNNCTG | 1 cut(s) | 101 |
| CfoI | GCGC | 3 cut(s) | 110, 202, 273 |
| CseI | GACGC | 1 cut(s) | 51 |
| CviAII | CATG | 1 cut(s) | 193 |
| CviJI | RGCY | 3 cut(s) | 27, 134, 146 |
| CviKI_1 | RGCY | 3 cut(s) | 27, 134, 146 |
| DdeI | CTNAG | 1 cut(s) | 78 |
| Eam1104I | CTCTTC | 1 cut(s) | 202 |
| EarI | CTCTTC | 1 cut(s) | 202 |
| Eco31I | GGTCTC | 1 cut(s) | 204 |
| FaeI | CATG | 1 cut(s) | 196 |
| FaiI | YATR | 1 cut(s) | 194 |
| FaqI | GGGAC | 2 cut(s) | 132, 242 |
| FatI | CATG | 1 cut(s) | 192 |
| FauI | CCCGC | 1 cut(s) | 109 |
| Fnu4HI | GCNGC | 3 cut(s) | 60, 102, 126 |
| Fsp4HI | GCNGC | 3 cut(s) | 60, 102, 126 |
| FspI | TGCGCA | 1 cut(s) | 272 |
| GlaI | GCGC | 3 cut(s) | 109, 201, 272 |
| GluI | GCNGC | 3 cut(s) | 60, 102, 126 |
| HaeII | RGCGCY | 2 cut(s) | 111, 203 |
| HapII | CCGG | 1 cut(s) | 204 |
| HgaI | GACGC | 1 cut(s) | 51 |
| HhaI | GCGC | 3 cut(s) | 110, 202, 273 |
| Hin1II | CATG | 1 cut(s) | 196 |
| Hin6I | GCGC | 3 cut(s) | 108, 200, 271 |
| HinP1I | GCGC | 3 cut(s) | 108, 200, 271 |
| HinfI | GANTC | 2 cut(s) | 74, 150 |
| HpaII | CCGG | 1 cut(s) | 204 |
| Hpy188I | TCNGA | 1 cut(s) | 79 |
| Hpy188III | TCNNGA | 2 cut(s) | 30, 174 |
| Hpy99I | CGWCG | 1 cut(s) | 67 |
| HpyAV | CCTTC | 1 cut(s) | 35 |
| HpyCH4V | TGCA | 1 cut(s) | 104 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 24, 101, 107, 122, 131 |
| HpyF3I | CTNAG | 1 cut(s) | 78 |
| Hsp92II | CATG | 1 cut(s) | 196 |
| HspAI | GCGC | 3 cut(s) | 108, 200, 271 |
| LmnI | GCTCC | 1 cut(s) | 92 |
| Lsp1109I | GCAGC | 3 cut(s) | 46, 88, 112 |
| MaeIII | GTNAC | 2 cut(s) | 71, 242 |
| MboII | GAAGA | 1 cut(s) | 219 |
| MlyI | GAGTC | 2 cut(s) | 68, 144 |
| MnlI | CCTC | 4 cut(s) | 31, 170, 177, 210 |
| MspI | CCGG | 1 cut(s) | 204 |
| MspR9I | CCNGG | 1 cut(s) | 204 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 24, 101, 107, 122, 131 |
| NciI | CCSGG | 1 cut(s) | 204 |
| NlaIII | CATG | 1 cut(s) | 196 |
| NmuCI | GTSAC | 2 cut(s) | 71, 242 |
| NsbI | TGCGCA | 1 cut(s) | 272 |
| PkrI | GCNGC | 3 cut(s) | 61, 103, 127 |
| PleI | GAGTC | 2 cut(s) | 68, 144 |
| PpsI | GAGTC | 2 cut(s) | 68, 144 |
| PstI | CTGCAG | 1 cut(s) | 106 |
| PstNI | CAGNNNCTG | 1 cut(s) | 101 |
| SatI | GCNGC | 3 cut(s) | 60, 102, 126 |
| SchI | GAGTC | 2 cut(s) | 68, 144 |
| ScrFI | CCNGG | 1 cut(s) | 204 |
| SetI | ASST | 3 cut(s) | 10, 29, 148 |
| SfcI | CTRYAG | 1 cut(s) | 102 |
| SsiI | CCGC | 1 cut(s) | 116 |
| StyD4I | CCNGG | 1 cut(s) | 202 |
| TaqI | TCGA | 1 cut(s) | 31 |
| TscAI | CASTG | 1 cut(s) | 76 |
| TseFI | GTSAC | 2 cut(s) | 71, 242 |
| TseI | GCWGC | 3 cut(s) | 59, 101, 125 |
| Tsp45I | GTSAC | 2 cut(s) | 71, 242 |
| TspDTI | ATGAA | 2 cut(s) | 27, 209 |
| TspRI | CASTG | 1 cut(s) | 76 |