Rroxscaffold_6G00400560
MYB Family

PHD zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0001342
Physical Location & Seq
Forward (+)
22655772 .. 22661050
5279 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00400560.1

Sequence Viewer

Length: 3084 bp
ATGGAGGACATGAGTGAGGACCAGAAGGCCATTGCTTGGCTTTGGGTCGTTGAAGGCCTCGCCACCATGAAACAAGTTGATGTTTCTCTCTTAACGGATTTGTTGGGTGAGATAGGTTCAGCATTACCTGATCATATGTCAAAAAATGCAAGGGAAAGGGTTGCTCTTAGATGTTTGGAGGAATTATTTGGCTCTAGTAATAATGGGATGAATAGTCATGTTCCATCTGCCCACAATTCTAAACTCAGCTTTGATTTATCCCAAAGTTGCGAGACTGTCCTCAAACGCATTACCGATGAGACACCGGAATTTGATTTGAGAAACGCTGGACCGGCGCTGTTGAAATGGGATATTCACTCCTTTATTGTGCACAAAAAGGCTGCTTTGCCTAAATGTGCTTTGAAACAGTTGGAAGAGTCGATTCTTGATGGCTCCCATCCGCATGCTGATGTCTTGAGAGGAAAGAGCGGTTTAACAATGACAAGTGATGCTGATAGAGTTTCTGTGAACGAAAGTAATCAAAGTCTAAATAAGAGCTGCTATAGTGCTCAAAACATGGGAGTAGAGGGGAACTCAGAGAATGAAAATCTATTGCCTTCCAAAAGGGATAGGATTGGATCCGATAATGAAAAGCGTGAAATGGTAAATGATTCTGATGATTGGCATATTGAAGCGAAAAAGATGAAGTGGGATGCCTCATATGTTTCACAGTCCATAGAAGTAGAGCAGAACCAAATTCCTTTAGATGGAAGCAAATGTTTGCAAGATACATCTGAAAGACATGTTCCAGTTTCTGTGAGTGAAAGGTGTGACGTGGCAGAAAATCAGATGGCAATGGAGCAAAACAGGGTAGAAGATGGTCACAGTGATTATGCTGCGTCAAAGAGATATGGACAGAGCAGTGATGATGCAATCCATAAGGACCAGAGAGAAAATCATTCTAATCCGACTTCAGTACCTCGGGATACATTTCAGGATAAAGGCCACCAATATACTTGTGTTGCTGAAGCCAAGGATGATGGTGGACTTCATTGCAAACTAAGAGTATCAAATGTTGCTCCTCTAGGTGAAACCCAGCATAAGATTTCTACTAAAGGATTCAGTTGTAATAGTGAGCATGATGCTCATATCAGAGTACCGCTTCTTTCATCCACATATGAATCTCAAAAACTAAGCAATGCTGATGAAGGCAATGGCCGGGATCCTGGAAATATGGCTGGTGAAAACCTTAAAAGGGTAAATTGCTCTGATGATTTCCATATAAGAGCCAAAAGGAGGGAGTGGGATGCCTATTATGTTTTACAGTCTATAGAACAGAACCAACTTCCTTTATATTCAGAAGATTCATCCGAAAGAGATGTTCCAGTTTCTGAGAGTTTAAGGTGTGAGTTGGCTGAAAATCAGATGGAAATGATGGAGGAAATCAGGGCTTTAGAGGATGGTCATGATGATTATACCGAGTCAAAGAAGAATGGACAAAGCACTTATGATGCAACCCATCAGAGTCGGTTGGAGAATTGTTGTAATGCCACTTCAATGCCTCAAGACACAATTCAGGATGAAGCCCGTCAACATACATGTGTTAATAAAACCAAAGATGATGATGGGCTTCAGCTTGAACTAAGAGCATCAGGTGTTGCTGCTCCAGATGAATCCCAGCATACAGTGTCTGCTAAAGTATTCAGTGATAGCACTGCTAATGATTTTGATATTAAAGTGCCACAACCTGCAACCACAGATGGACCGCAATGGAAGAGCCTTGCTAATAAACACAAAGACGATTATGAGCATTGTTCAAAACCAAGTTCATCAAGTGTTGCTTCTCTAAATGAAACCCAGCAGAAGAATTCTACTCAACAATCTGATTGTGTCAGTGAACATGATTCTCATATTAAAGTGTCATACCCTGCATATATAGATGGATCCCAGCAGAAGAACATTGCTGATAAATCCAAAGAGCTCATGGATTTTCTTTCTGAGTCAGAGACATCAAATGAAGGTGATGGTTTTCATGATAAAAAGATTGATGCTGCCATGAAGAGGCATGCTTTCTTGAGATCTCAATGCACGTCTAGTCATGATTCCTTAGTGACAACAGTCACAGAGAAAAATCGTTCCCTGTACTGTAATGAAGGTGGTCAATTATTGACTTGTAAAACAAGTAATTGCCCTGTGGTGGTTCATGAGAACTGGCTACGTTCCTCAGCCATTTCTTTTGAGAAGGGTAACTTTTATTGCCCCTTCTGTTCATATGCTCTTGCCCTTACTGATTACCTTGAAGCTAGGAAACAAACTTCCCTGTTAAAGACAGGACTAAATGCATTTGTTCATGCTAATTTGGAAAACCGACCGATGGAACCTGTTGGAAGAGTACATAGCAAAGTGAATAATTGCTCTAGGCATTTTGAGGATAATCTTCTTGGGAAACCTTATCAGAATAGGCATCTGGAAGAGCGTGAAGAAAATCAGGGAAATCAATGTGAAGAACATGTAAATGAAGATGATGTCCAGTTTCACAGTATTATATATGATAAGCAACAAGGACCACCTTCTTCATCATACAGTGACATCAAGTCTATGCGTGGAAAAGTTCATGTACCAGCTGGTGAGAAAGAAGGGGAAGAAAAGCTAGTCCATGAGTGTGTGTCAGCAGGCCTTGATAGATTTCAGAACCAAGTACTGGAAGGTGATCATTTCTCCTGCAAAAACACACAGAGTCTCCTAGGTGATCAATTGTCCAGTAAAAACACACAGAGCCTCCTTGTTGACCAAGGACAAGCTGGTGCAGTAGAAGTCGTGCAGCAGCACATTACTGATTACTCCTTAAGAAAAAGGAGCAAATCTCCTTGCACCTGCACCCAGCTGGCAACGACTCAGTCAAGGAAAAAAAAGGTTCCATGGACAGTTGAGGAAGAAGAGATGCTCAAGAAGGGAGTGCAGGAATTTCAATGCAATGATGAAACAAGAATGCCATGGAAGCAAATATTTGAATTTGGTTCTGATGTGTTTCTGTCAGGCCGTACCCCAACACACCTTAAGGACAAATGGAGGAACATATGCAAAGGAAGTCCAAAGTCGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_6 Myb_DNA-binding

Protein Analysis

1027

Amino Acids

115.25

Weight (kDa)

5.43

Isoelectric Point (pI)

51.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 964 - 1018 1.1e-06 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2861
Acc36I ACCTGC 2 cut(s) 1735, 2861
AccB7I CCANNNNNTGG 2 cut(s) 36, 2680
AccBSI CCGCTC 1 cut(s) 468
AciI CCGC 4 cut(s) 440, 468, 1139, 1745
AclWI GGATC 6 cut(s) 612, 625, 1196, 1209, 1917, 1930
AcoI YGGCCR 1 cut(s) 1195
AcsI RAATTY 5 cut(s) 308, 735, 1846, 2942, 2990
AcuI CTGAAG 3 cut(s) 936, 1026, 1595
AfaI GTAC 7 cut(s) 957, 1137, 2123, 2373, 2598, 2679, 3022
AfiI CCNNNNNNNGG 8 cut(s) 36, 746, 1234, 1275, 2040, 2176, 2353, 2680
AflII CTTAAG 2 cut(s) 2824, 3035
AflIII ACRYGT 3 cut(s) 781, 1577, 2488
AhdI GACNNNNNGTC 1 cut(s) 2572
AjiI CACGTC 2 cut(s) 814, 2070
AjnI CCWGG 1 cut(s) 1204
AluBI AGCT 9 cut(s) 249, 537, 1615, 1960, 2282, 2603, 2629, 2780, 2863
AluI AGCT 9 cut(s) 249, 537, 1615, 1960, 2282, 2603, 2629, 2780, 2863
Alw21I GWGCWC 3 cut(s) 372, 550, 1962
Alw26I GTCTC 4 cut(s) 266, 293, 1979, 2723
Alw44I GTGCAC 1 cut(s) 368
AlwI GGATC 6 cut(s) 612, 625, 1196, 1209, 1917, 1930
AlwNI CAGNNNCTG 3 cut(s) 794, 1370, 1670
Ama87I CYCGRG 1 cut(s) 960
AoxI GGCC 6 cut(s) 27, 55, 982, 1195, 2653, 3016
ApaLI GTGCAC 1 cut(s) 368
ApeKI GCWGC 7 cut(s) 380, 537, 875, 1640, 2030, 2800, 2803
ApoI RAATTY 5 cut(s) 308, 735, 1846, 2942, 2990
AspA2I CCTAGG 1 cut(s) 2722
AspLEI GCGC 1 cut(s) 337
AspS9I GGNCC 5 cut(s) 19, 329, 922, 1742, 2543
AsuC2I CCSGG 1 cut(s) 1199
AsuHPI GGTGA 7 cut(s) 119, 1079, 1232, 2012, 2618, 2699, 2738
AvaI CYCGRG 1 cut(s) 960
AvaII GGWCC 5 cut(s) 19, 329, 922, 1742, 2543
AvrII CCTAGG 1 cut(s) 2722
BaeGI GKGCMC 1 cut(s) 372
BaeI ACNNNNGTAYC 2 cut(s) 939, 972
BamHI GGATCC 3 cut(s) 617, 1201, 1922
BanII GRGCYC 1 cut(s) 1962
BarI GAAGNNNNNNTAC 2 cut(s) 1516, 1548
Bbv12I GWGCWC 3 cut(s) 372, 550, 1962
BbvCI CCTCAGC 1 cut(s) 2203
BbvI GCAGC 7 cut(s) 367, 524, 862, 1627, 2017, 2812, 2815
BceAI ACGGC 1 cut(s) 3003
BciT130I CCWGG 1 cut(s) 1206
BciVI GTATCC 1 cut(s) 958
BclI TGATCA 3 cut(s) 130, 2689, 2728
BcnI CCSGG 1 cut(s) 1199
BcoDI GTCTC 4 cut(s) 266, 293, 1979, 2723
BfaI CTAG 7 cut(s) 195, 1064, 2073, 2283, 2397, 2630, 2723
BfmI CTRYAG 2 cut(s) 541, 1308
BfoI RGCGCY 1 cut(s) 338
BfrI CTTAAG 2 cut(s) 2824, 3035
BfuAI ACCTGC 2 cut(s) 1735, 2861
BfuI GTATCC 1 cut(s) 958
BglII AGATCT 1 cut(s) 2057
BisI GCNGC 7 cut(s) 381, 538, 876, 1641, 2031, 2801, 2804
BlnI CCTAGG 1 cut(s) 2722
BlsI GCNGC 7 cut(s) 382, 539, 877, 1642, 2032, 2802, 2805
BmcAI AGTACT 1 cut(s) 2679
Bme1390I CCNGG 2 cut(s) 1199, 1206
Bme18I GGWCC 5 cut(s) 19, 329, 922, 1742, 2543
BmeRI GACNNNNNGTC 1 cut(s) 2572
BmeT110I CYCGRG 1 cut(s) 960
BmgBI CACGTC 2 cut(s) 814, 2070
BmgT120I GGNCC 5 cut(s) 19, 329, 922, 1742, 2543
BmiI GGNNCC 6 cut(s) 433, 619, 1203, 1924, 2358, 2895
BmrFI CCNGG 2 cut(s) 1199, 1206
BoxI GACNNNNGTC 1 cut(s) 2096
BplI GAGNNNNNCTC 4 cut(s) 557, 589, 2827, 2859
BpmI CTGGAG 1 cut(s) 1629
Bpu10I CCTNAGC 1 cut(s) 2203
BpuEI CTTGAG 4 cut(s) 475, 1527, 2074, 2909
BpuMI CCSGG 1 cut(s) 1199
BsaJI CCNNGG 6 cut(s) 959, 1011, 2722, 2770, 2897, 2972
BsaWI WCCGGW 1 cut(s) 304
BsaXI ACNNNNNCTCC 4 cut(s) 2703, 2733, 2742, 2772
Bsc4I CCNNNNNNNGG 8 cut(s) 36, 746, 1234, 1275, 2040, 2176, 2353, 2680
Bse118I RCCGGY 1 cut(s) 331
Bse1I ACTGG 6 cut(s) 788, 1364, 2195, 2509, 2685, 2739
Bse3DI GCAATG 8 cut(s) 30, 840, 1030, 1183, 1198, 1754, 1938, 2959
BseBI CCWGG 1 cut(s) 1206
BseDI CCNNGG 6 cut(s) 959, 1011, 2722, 2770, 2897, 2972
BseGI GGATG 9 cut(s) 213, 436, 697, 1021, 1148, 1291, 1346, 1444, 1564
BseLI CCNNNNNNNGG 8 cut(s) 36, 746, 1234, 1275, 2040, 2176, 2353, 2680
BseMI GCAATG 8 cut(s) 30, 840, 1030, 1183, 1198, 1754, 1938, 2959
BseMII CTCAG 6 cut(s) 259, 588, 1362, 1968, 2217, 2888
BseNI ACTGG 6 cut(s) 788, 1364, 2195, 2509, 2685, 2739
BseRI GAGGAG 1 cut(s) 1050
BseSI GKGCMC 1 cut(s) 372
BseXI GCAGC 7 cut(s) 367, 524, 862, 1627, 2017, 2812, 2815
BseYI CCCAGC 5 cut(s) 1074, 1656, 1836, 1926, 2859
BsgI GTGCAG 4 cut(s) 2805, 2819, 2839, 2957
Bsh1285I CGRYCG 1 cut(s) 2351
BshFI GGCC 6 cut(s) 29, 57, 984, 1197, 2655, 3018
BsiEI CGRYCG 1 cut(s) 2351
BsiHKAI GWGCWC 3 cut(s) 372, 550, 1962
BsiHKCI CYCGRG 1 cut(s) 960
BsiSI CCGG 3 cut(s) 305, 332, 1198
BslI CCNNNNNNNGG 8 cut(s) 36, 746, 1234, 1275, 2040, 2176, 2353, 2680
BsmAI GTCTC 4 cut(s) 266, 293, 1979, 2723
BsmI GAATGC 1 cut(s) 2973
BsnI GGCC 6 cut(s) 29, 57, 984, 1197, 2655, 3018
BsoBI CYCGRG 1 cut(s) 960
Bsp1286I GDGCHC 3 cut(s) 372, 550, 1962
Bsp143I GATC 7 cut(s) 130, 617, 1201, 1922, 2057, 2689, 2728
Bsp19I CCATGG 2 cut(s) 2897, 2972
BspACI CCGC 4 cut(s) 440, 468, 1139, 1745
BspANI GGCC 6 cut(s) 29, 57, 984, 1197, 2655, 3018
BspCNI CTCAG 6 cut(s) 258, 587, 1363, 1969, 2216, 2887
BspHI TCATGA 4 cut(s) 1444, 2011, 2077, 2182
BspLI GGNNCC 6 cut(s) 433, 619, 1203, 1924, 2358, 2895
BspMI ACCTGC 2 cut(s) 1735, 2861
BspPI GGATC 6 cut(s) 612, 625, 1196, 1209, 1917, 1930
BspQI GCTCTTC 2 cut(s) 1748, 2445
BspTI CTTAAG 2 cut(s) 2824, 3035
BsrBI CCGCTC 1 cut(s) 468
BsrDI GCAATG 8 cut(s) 30, 840, 1030, 1183, 1198, 1754, 1938, 2959
BsrFI RCCGGY 1 cut(s) 331
BsrI ACTGG 6 cut(s) 788, 1364, 2195, 2509, 2685, 2739
BssAI RCCGGY 1 cut(s) 331
BssECI CCNNGG 6 cut(s) 959, 1011, 2722, 2770, 2897, 2972
BssMI GATC 7 cut(s) 130, 617, 1201, 1922, 2057, 2689, 2728
BssT1I CCWWGG 5 cut(s) 1011, 2722, 2770, 2897, 2972
Bst2UI CCWGG 1 cut(s) 1206
Bst6I CTCTTC 6 cut(s) 408, 1748, 2033, 2362, 2445, 2910
BstAFI CTTAAG 2 cut(s) 2824, 3035
BstC8I GCNNGC 4 cut(s) 444, 2046, 2653, 2865
BstDSI CCRYGG 2 cut(s) 2897, 2972
BstF5I GGATG 9 cut(s) 213, 436, 697, 1021, 1148, 1291, 1346, 1444, 1564
BstH2I RGCGCY 1 cut(s) 338
BstHHI GCGC 1 cut(s) 337
BstKTI GATC 7 cut(s) 133, 620, 1204, 1925, 2060, 2692, 2731
BstMAI GTCTC 4 cut(s) 266, 293, 1979, 2723
BstMBI GATC 7 cut(s) 130, 617, 1201, 1922, 2057, 2689, 2728
BstMCI CGRYCG 1 cut(s) 2351
BstMWI GCNNNNNNNGC 2 cut(s) 332, 2977
BstNI CCWGG 1 cut(s) 1206
BstNSI RCATGY 5 cut(s) 446, 785, 1581, 2048, 2492
BstPAI GACNNNNGTC 1 cut(s) 2096
BstSCI CCNGG 2 cut(s) 1197, 1204
BstSFI CTRYAG 2 cut(s) 541, 1308
BstSLI GKGCMC 1 cut(s) 372
BstV1I GCAGC 7 cut(s) 367, 524, 862, 1627, 2017, 2812, 2815
BstX2I RGATCY 4 cut(s) 617, 1201, 1922, 2057
BstYI RGATCY 4 cut(s) 617, 1201, 1922, 2057
BsuI GTATCC 1 cut(s) 958
BsuRI GGCC 6 cut(s) 29, 57, 984, 1197, 2655, 3018
BtgI CCRYGG 2 cut(s) 2897, 2972
BtrI CACGTC 2 cut(s) 814, 2070
BtsCI GGATG 9 cut(s) 213, 436, 697, 1021, 1148, 1291, 1346, 1444, 1564
BtsI GCAGTG 2 cut(s) 907, 1692
BtsIMutI CAGTG 7 cut(s) 871, 907, 1671, 1690, 1692, 1879, 2569
BveI ACCTGC 2 cut(s) 1735, 2861
Cac8I GCNNGC 4 cut(s) 444, 2046, 2653, 2865
CaiI CAGNNNCTG 3 cut(s) 794, 1370, 1670
CciI TCATGA 4 cut(s) 1444, 2011, 2077, 2182
CfoI GCGC 1 cut(s) 337
Cfr10I RCCGGY 1 cut(s) 331
Cfr13I GGNCC 5 cut(s) 19, 329, 922, 1742, 2543
CseI GACGC 1 cut(s) 867
Csp6I GTAC 7 cut(s) 956, 1136, 2122, 2372, 2597, 2678, 3021
CviQI GTAC 7 cut(s) 956, 1136, 2122, 2372, 2597, 2678, 3021
DpnI GATC 7 cut(s) 132, 619, 1203, 1924, 2059, 2691, 2730
DpnII GATC 7 cut(s) 130, 617, 1201, 1922, 2057, 2689, 2728
DriI GACNNNNNGTC 1 cut(s) 2572
EaeI YGGCCR 1 cut(s) 1195
Eam1104I CTCTTC 6 cut(s) 408, 1748, 2033, 2362, 2445, 2910
Eam1105I GACNNNNNGTC 1 cut(s) 2572
EarI CTCTTC 6 cut(s) 408, 1748, 2033, 2362, 2445, 2910
Ecl136II GAGCTC 1 cut(s) 1960
Eco130I CCWWGG 5 cut(s) 1011, 2722, 2770, 2897, 2972
Eco147I AGGCCT 2 cut(s) 57, 2655
Eco24I GRGCYC 1 cut(s) 1962
Eco47I GGWCC 5 cut(s) 19, 329, 922, 1742, 2543
Eco53kI GAGCTC 1 cut(s) 1960
Eco57I CTGAAG 3 cut(s) 936, 1026, 1595
Eco88I CYCGRG 1 cut(s) 960
EcoICRI GAGCTC 1 cut(s) 1960
EcoRI GAATTC 1 cut(s) 1846
EcoRII CCWGG 1 cut(s) 1204
EcoT14I CCWWGG 5 cut(s) 1011, 2722, 2770, 2897, 2972
EcoT22I ATGCAT 1 cut(s) 2323
EcoT38I GRGCYC 1 cut(s) 1962
ErhI CCWWGG 5 cut(s) 1011, 2722, 2770, 2897, 2972
FalI AAGNNNNNCTT 4 cut(s) 1804, 1836, 2213, 2245
FauNDI CATATG 5 cut(s) 135, 700, 1156, 2251, 3056
FbaI TGATCA 3 cut(s) 130, 2689, 2728
Fnu4HI GCNGC 7 cut(s) 381, 538, 876, 1641, 2031, 2801, 2804
FokI GGATG 9 cut(s) 220, 423, 704, 1028, 1135, 1298, 1333, 1451, 1571
FriOI GRGCYC 1 cut(s) 1962
Fsp4HI GCNGC 7 cut(s) 381, 538, 876, 1641, 2031, 2801, 2804
FspBI CTAG 7 cut(s) 195, 1064, 2073, 2283, 2397, 2630, 2723
GlaI GCGC 1 cut(s) 336
GluI GCNGC 7 cut(s) 381, 538, 876, 1641, 2031, 2801, 2804
GsaI CCCAGC 5 cut(s) 1078, 1660, 1840, 1930, 2863
GsuI CTGGAG 1 cut(s) 1629
HaeII RGCGCY 1 cut(s) 338
HaeIII GGCC 6 cut(s) 29, 57, 984, 1197, 2655, 3018
HapII CCGG 3 cut(s) 305, 332, 1198
HgaI GACGC 1 cut(s) 867
HhaI GCGC 1 cut(s) 337
Hin6I GCGC 1 cut(s) 335
HinP1I GCGC 1 cut(s) 335
HincII GTYRAC 2 cut(s) 1571, 2767
HindII GTYRAC 2 cut(s) 1571, 2767
HpaII CCGG 3 cut(s) 305, 332, 1198
HphI GGTGA 7 cut(s) 119, 1079, 1232, 2012, 2618, 2699, 2738
Hpy166II GTNNAC 6 cut(s) 370, 508, 1025, 1571, 1877, 2767
Hpy8I GTNNAC 6 cut(s) 370, 508, 1025, 1571, 1877, 2767
HpyCH4IV ACGT 3 cut(s) 813, 2069, 2197
HpyF10VI GCNNNNNNNGC 2 cut(s) 332, 2977
HpySE526I ACGT 3 cut(s) 813, 2069, 2197
HspAI GCGC 1 cut(s) 335
Ksp22I TGATCA 3 cut(s) 130, 2689, 2728
Kzo9I GATC 7 cut(s) 130, 617, 1201, 1922, 2057, 2689, 2728
LguI GCTCTTC 2 cut(s) 1748, 2445
LmnI GCTCC 5 cut(s) 437, 838, 1063, 1648, 2835
Lsp1109I GCAGC 7 cut(s) 367, 524, 862, 1627, 2017, 2812, 2815
MaeI CTAG 7 cut(s) 195, 1064, 2073, 2283, 2397, 2630, 2723
MaeII ACGT 3 cut(s) 813, 2069, 2197
MaeIII GTNAC 6 cut(s) 809, 860, 2089, 2098, 2225, 2564
MalI GATC 7 cut(s) 132, 619, 1203, 1924, 2059, 2691, 2730
MbiI CCGCTC 1 cut(s) 468
MboI GATC 7 cut(s) 130, 617, 1201, 1922, 2057, 2689, 2728
MfeI CAATTG 1 cut(s) 2732
MflI RGATCY 4 cut(s) 617, 1201, 1922, 2057
MhlI GDGCHC 3 cut(s) 372, 550, 1962
MlyI GAGTC 6 cut(s) 425, 1469, 1513, 1988, 2725, 2866
MmeI TCCRAC 4 cut(s) 390, 971, 1491, 2344
Mph1103I ATGCAT 1 cut(s) 2323
MslI CAYNNNNRTG 6 cut(s) 441, 447, 1535, 1578, 2493, 2640
MspA1I CMGCKG 2 cut(s) 2603, 2863
MspCI CTTAAG 2 cut(s) 2824, 3035
MspI CCGG 3 cut(s) 305, 332, 1198
MspR9I CCNGG 2 cut(s) 1199, 1206
MunI CAATTG 1 cut(s) 2732
Mva1269I GAATGC 1 cut(s) 2973
MvaI CCWGG 1 cut(s) 1206
MwoI GCNNNNNNNGC 2 cut(s) 332, 2977
NciI CCSGG 1 cut(s) 1199
NcoI CCATGG 2 cut(s) 2897, 2972
NdeI CATATG 5 cut(s) 135, 700, 1156, 2251, 3056
NdeII GATC 7 cut(s) 130, 617, 1201, 1922, 2057, 2689, 2728
NlaIV GGNNCC 6 cut(s) 433, 619, 1203, 1924, 2358, 2895
NmuCI GTSAC 5 cut(s) 809, 860, 2089, 2098, 2564
NsiI ATGCAT 1 cut(s) 2323
NspI RCATGY 5 cut(s) 446, 785, 1581, 2048, 2492
PaeI GCATGC 2 cut(s) 446, 2048
PagI TCATGA 4 cut(s) 1444, 2011, 2077, 2182
PaqCI CACCTGC 1 cut(s) 2861
PceI AGGCCT 2 cut(s) 57, 2655
PciI ACATGT 3 cut(s) 781, 1577, 2488
PciSI GCTCTTC 2 cut(s) 1748, 2445
PctI GAATGC 1 cut(s) 2973
PfeI GAWTC 8 cut(s) 421, 650, 1098, 1160, 1343, 1652, 1883, 2081
PflFI GACNNNGTC 1 cut(s) 2875
PflMI CCANNNNNTGG 2 cut(s) 36, 2680
PfoI TCCNGGA 1 cut(s) 1204
PkrI GCNGC 7 cut(s) 382, 539, 877, 1642, 2032, 2802, 2805
PleI GAGTC 6 cut(s) 424, 1468, 1512, 1987, 2724, 2866
PpsI GAGTC 6 cut(s) 424, 1468, 1512, 1987, 2724, 2866
PscI ACATGT 3 cut(s) 781, 1577, 2488
PshAI GACNNNNGTC 1 cut(s) 2096
Psp124BI GAGCTC 1 cut(s) 1962
Psp6I CCWGG 1 cut(s) 1204
PspFI CCCAGC 5 cut(s) 1074, 1656, 1836, 1926, 2859
PspGI CCWGG 1 cut(s) 1204
PspN4I GGNNCC 6 cut(s) 433, 619, 1203, 1924, 2358, 2895
PspPI GGNCC 5 cut(s) 19, 329, 922, 1742, 2543
PstNI CAGNNNCTG 3 cut(s) 794, 1370, 1670
PsuI RGATCY 4 cut(s) 617, 1201, 1922, 2057
PsyI GACNNNGTC 1 cut(s) 2875
PvuII CAGCTG 2 cut(s) 2603, 2863
RsaI GTAC 7 cut(s) 957, 1137, 2123, 2373, 2598, 2679, 3022
RsaNI GTAC 7 cut(s) 956, 1136, 2122, 2372, 2597, 2678, 3021
RseI CAYNNNNRTG 6 cut(s) 441, 447, 1535, 1578, 2493, 2640
SacI GAGCTC 1 cut(s) 1962
SapI GCTCTTC 2 cut(s) 1748, 2445
SatI GCNGC 7 cut(s) 381, 538, 876, 1641, 2031, 2801, 2804
Sau3AI GATC 7 cut(s) 130, 617, 1201, 1922, 2057, 2689, 2728
Sau96I GGNCC 5 cut(s) 19, 329, 922, 1742, 2543
ScaI AGTACT 1 cut(s) 2679
SchI GAGTC 6 cut(s) 425, 1469, 1513, 1988, 2725, 2866
ScrFI CCNGG 2 cut(s) 1199, 1206
SduI GDGCHC 3 cut(s) 372, 550, 1962
SfcI CTRYAG 2 cut(s) 541, 1308
SinI GGWCC 5 cut(s) 19, 329, 922, 1742, 2543
SmiMI CAYNNNNRTG 6 cut(s) 441, 447, 1535, 1578, 2493, 2640
SmlI CTYRAG 6 cut(s) 454, 1542, 2053, 2824, 2924, 3035
SmoI CTYRAG 6 cut(s) 454, 1542, 2053, 2824, 2924, 3035
SphI GCATGC 2 cut(s) 446, 2048
SseBI AGGCCT 2 cut(s) 57, 2655
SsiI CCGC 4 cut(s) 440, 468, 1139, 1745
SspI AATATT 1 cut(s) 2985
SspMI CTAG 7 cut(s) 195, 1064, 2073, 2283, 2397, 2630, 2723
SstI GAGCTC 1 cut(s) 1962
StuI AGGCCT 2 cut(s) 57, 2655
StyD4I CCNGG 2 cut(s) 1197, 1204
StyI CCWWGG 5 cut(s) 1011, 2722, 2770, 2897, 2972
TaiI ACGT 3 cut(s) 816, 2072, 2200
TaqI TCGA 2 cut(s) 419, 3077
TaqII GACCGA 1 cut(s) 2365
TatI WGTACW 3 cut(s) 2121, 2371, 2677
TfiI GAWTC 8 cut(s) 421, 650, 1098, 1160, 1343, 1652, 1883, 2081
TscAI CASTG 7 cut(s) 871, 907, 1671, 1690, 1699, 1879, 2569
TseFI GTSAC 5 cut(s) 809, 860, 2089, 2098, 2564
TseI GCWGC 7 cut(s) 380, 537, 875, 1640, 2030, 2800, 2803
Tsp45I GTSAC 5 cut(s) 809, 860, 2089, 2098, 2564
TspGWI ACGGA 1 cut(s) 110
TspRI CASTG 7 cut(s) 871, 907, 1671, 1690, 1699, 1879, 2569
Tth111I GACNNNGTC 1 cut(s) 2875
Van91I CCANNNNNTGG 2 cut(s) 36, 2680
Vha464I CTTAAG 2 cut(s) 2824, 3035
VneI GTGCAC 1 cut(s) 368
VpaK11BI GGWCC 5 cut(s) 19, 329, 922, 1742, 2543
XapI RAATTY 5 cut(s) 308, 735, 1846, 2942, 2990
XceI RCATGY 5 cut(s) 446, 785, 1581, 2048, 2492
XcmI CCANNNNNNNNNTGG 2 cut(s) 1960, 2777
XmaJI CCTAGG 1 cut(s) 2722
XspI CTAG 7 cut(s) 195, 1064, 2073, 2283, 2397, 2630, 2723
ZrmI AGTACT 1 cut(s) 2679
Zsp2I ATGCAT 1 cut(s) 2323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.