Rh3AG241600
MYB Family

PHD zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0001342
Physical Location & Seq
Reverse (-)
25376737 .. 25382902
6166 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG241600.1

Sequence Viewer

Length: 2946 bp
ATGGAGGACATGAGTGAGGACCAGAAAGCCATTGCTTGGCTTTGGGTCGTTGAAGGCCTCGCCACCATGAAACAAGTTGATGTTTCTCTCTTAACGGATTTGTTGGGTGAGATAGGTTCAGCATTACCTGATCATATGTCAAAAAATGCAAGGGAAAGGGTTGCTCTCAGATGTTTGGAGGAATTATTTGGCTCTAGTAATAATGGGATGAATGGTCAAGTTCCATCTGCCCACAATTCTAAAGTCAGCTTTGATTTATCCCAAAGTTGCGAGACTGTCCTCAAACGCATTACCGATGAGACACCGGAATTTGATTTGCGAAACGCTGGGCCGGCGCTGTTGAAATGGGATATTCACTCCTTTATTGTGCACAAAAAGGCTGCTTTGCCTAAATGTGCTTTGAAACAGTTGAAAGTGTCGATTCTTGATGGCTCCCATCCTCATGCTGATGTCTTGAGAGGAAAGAGCAGTTTAACAATGACAAGTGATGCTGATAGAGTTTCTGTGAACGAAAGTAATCAAAGTCTAAATAAGAGCTGCTATAGTGCTCAAAACATGGGAGTAGAAGGGAACTCAGAGAATGAAAATCTATTGCCTTCCGAAAGGGATAGGATTGGATCCGATAATGAAAAGCGTGAAAGGGTAAATGATTCTGATGATTGGCATATTGAAGCGAAAAAGATGAAGTGGGATGCCTCATATGTTTCACAGTCCATAGAATTAGAGCAGAACCAAATTCCTTTAGATGGAAGAGAATGTTTGCAAGATACGTCTGAAAGACATGTTCCAGTTTCTGTGAGTGAAAGGTGTGATGTGGCAGAAAATCAGATGGCAATGGAACAAAACAGGGTAGAAGATGGTCACAGTGATTATGCTGCGTCAAAGAGATATGGACAGAGCAGTGATGATGCAATCCATAAGGATCAGAGAGAAAATCATTCTAATCCGACTTCAGTACCTCGGGATACATTTCAGGATAAAGGCCACCAATATACTTGTGTTGCTGAAGCCAAAGATGATGGTGGACTTCATTGCAAACTAAGAGTATCAAATGTTGATCCTCTAGGTGAAACCCAGCATAAGATTTCTACTAAAGGATTCAGTTGTAATAGTGAGCATGATGCTCATATCAGAGTACCGCTTCCTTCATCCACAGATGAATCTCAAAAACTAAGCAATGCTGATGAAGGCAATGGCTGGGATCCTGGAAATATGGCTGGTGAAAACCTTAAAAGGGTAAATTGCTCTGATGATTTCCATATAAGAGCCAAAAGGAGGGAGTGGGACGCCTATTATGTTTTACAGTCTATAGAACAGAACCAACTTCCTTTATATTCAGAAGATTCATCTGAAAGAGATGTTCCAGTTTCTGAGAGTTTAAGATGTGACTTGGCTGAAAATCAGATGGAAATGATGGAGGAAATCAGGGCCTTAGAGGATGGTCATGATGATTATACCGAGTCAAAGAAGAATGGACAAAGCACTTATGACGCAACCCATCACAGTCAGTTGGAGAATTGTTGTAATGCCACTTCAATGCATCAAGACACAATTCAGGATGAAGCCCGTCAACATACATGTGTTAATAAAACCAAAGATGATGATGGGCTTCAACTTGAACTAAGAGCATCAGGTGTTGCTGCTCCAGACGAATCCCAGCATACAGTGTCTACTAAAGTATTCAGTGATAACACTGCTAATGATTTTCATATTAAAGTGCTACACCCTGCAACCACAGATGGACCGCAATGGAAGAGCCTTGCTAATAATAAACACAAGCATTGTTCGAAACCAAGTTCATCAGGTGTTGGTTCTCTAAATGAAACCCAGCAGAAGAATTCTACTCAACAATCTGATTGTGTCAGTGAACATGATTCTCATATTAAAGTGTCATACCCTGCATATATAGATGGATCCCAGCAGAAGAACATTGCTGATAAATCCAAAGAGCTCATGGATTTTCTTTGTGAGTCAGACACATCAAATGAAAGTGATGGTTTTCATGATAAAAAGATTGATGCTGCCATGAAGAAGCATGCTTTCTTGAGATCTCAATGCACGTCTAGTCATGATTCCTTAGTGACAACAGTCACAGAGAAAAATCGTTCCCTGTACTGTAATGAAGGTGGTCAATTATTGACTTGTAAAACAAGTAATTGCCCTGTGGTGGTTCATGAGAACTGGCTACGTTCCTCAGCCATTTCTTTTGAGAAGGGTAACTTTTATTGCCCCTTCTGTTTATATGTTCTTGCCCTTACTGATTACCTTGAAGCTAGGAAACAAACTTCCCTGTTAAAGACAGGACTAAATGCATTTGTTCATGCTAATTTGGAAAACCGACCAATGGAACCTGTTGGAAAAGTACATAGCAAAGTGAATAATTGCTCTAGGCATTTGGAGGATATTCTTCTAGGGAAACCTTATCAGAATAGGCATCTGGAAGAGCGTGAAGAAAATCAGGGAAATCAATGTGAAGAACATGTAAATGAAGTTGATGATGTCCAGTTTCACAATATTATTTATGATAAGCAACAGGGACTACCTTCTTCATCATGCACTGACATCAAGTCTATGCGTGGAAAAGTTCATGTACCAGCTGGTGAGAAAGAAGGGAAAGAAAAGGCAGTCCATGAGTGTGTGTCAGCAGGCCTTGATAGATTTCAGAGCCAAGTACTGGAAGGTGATCATTTGTCCAGTAAAAACATACAGAGCCTCCTAGGTGATCATTTTTCCAGTAAAAACACACAGAGCCTCCTTGTTGGCCAAGGACAAGCTGGTGCAGTAGAAGTTGTGCAGCAGCACATTACTGATTACTCCTTAAGAAAAAGGAGCAAATCTCTTTGCACCTGCACCCAGCTGGCAACGACTCAGTCAAGGAAAAAAAAGGTTCCATGGACAGTTGAGGAAGAAGAGATGCTCAAGGTTCTTGGTTTTCTTTTTCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_6 Myb_DNA-binding

Protein Analysis

981

Amino Acids

109.8

Weight (kDa)

5.47

Isoelectric Point (pI)

52.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2855
Acc36I ACCTGC 1 cut(s) 2855
AccB7I CCANNNNNTGG 2 cut(s) 36, 2674
AccI GTMKAC 1 cut(s) 1670
AciI CCGC 2 cut(s) 1139, 1745
AclWI GGATC 8 cut(s) 612, 625, 930, 1052, 1196, 1209, 1908, 1921
AcoI YGGCCR 1 cut(s) 2761
AcsI RAATTY 3 cut(s) 308, 735, 1837
AcuI CTGAAG 2 cut(s) 936, 1026
AcyI GRCGYC 1 cut(s) 1287
AfaI GTAC 6 cut(s) 957, 1137, 2114, 2364, 2592, 2673
AfiI CCNNNNNNNGG 7 cut(s) 36, 746, 1234, 1275, 2167, 2344, 2674
AflII CTTAAG 1 cut(s) 2818
AflIII ACRYGT 3 cut(s) 781, 1577, 2479
AhdI GACNNNNNGTC 1 cut(s) 2566
AjiI CACGTC 1 cut(s) 2061
AjnI CCWGG 1 cut(s) 1204
AluBI AGCT 7 cut(s) 249, 537, 1951, 2273, 2597, 2774, 2857
AluI AGCT 7 cut(s) 249, 537, 1951, 2273, 2597, 2774, 2857
Alw21I GWGCWC 3 cut(s) 372, 550, 1953
Alw26I GTCTC 2 cut(s) 266, 293
Alw44I GTGCAC 1 cut(s) 368
AlwI GGATC 8 cut(s) 612, 625, 930, 1052, 1196, 1209, 1908, 1921
AlwNI CAGNNNCTG 2 cut(s) 794, 1370
Ama87I CYCGRG 1 cut(s) 960
AoxI GGCC 6 cut(s) 55, 329, 982, 1428, 2647, 2761
ApaLI GTGCAC 1 cut(s) 368
ApeKI GCWGC 7 cut(s) 380, 537, 875, 1640, 2021, 2794, 2797
ApoI RAATTY 3 cut(s) 308, 735, 1837
AspA2I CCTAGG 1 cut(s) 2716
AspLEI GCGC 1 cut(s) 337
AspS9I GGNCC 4 cut(s) 19, 329, 1428, 1742
AsuHPI GGTGA 6 cut(s) 119, 1079, 1232, 2612, 2693, 2732
AsuII TTCGAA 1 cut(s) 1787
AvaI CYCGRG 1 cut(s) 960
AvaII GGWCC 2 cut(s) 19, 1742
AvrII CCTAGG 1 cut(s) 2716
BaeGI GKGCMC 1 cut(s) 372
BaeI ACNNNNGTAYC 2 cut(s) 939, 972
BalI TGGCCA 1 cut(s) 2763
BamHI GGATCC 3 cut(s) 617, 1201, 1913
BanII GRGCYC 1 cut(s) 1953
BarI GAAGNNNNNNTAC 2 cut(s) 1516, 1548
Bbv12I GWGCWC 3 cut(s) 372, 550, 1953
BbvCI CCTCAGC 1 cut(s) 2194
BbvI GCAGC 7 cut(s) 367, 524, 862, 1627, 2008, 2806, 2809
BciT130I CCWGG 1 cut(s) 1206
BciVI GTATCC 1 cut(s) 958
BclI TGATCA 3 cut(s) 130, 2683, 2722
BcoDI GTCTC 2 cut(s) 266, 293
BfaI CTAG 7 cut(s) 195, 1064, 2064, 2274, 2388, 2411, 2717
BfmI CTRYAG 2 cut(s) 541, 1308
BfoI RGCGCY 1 cut(s) 338
BfrI CTTAAG 1 cut(s) 2818
BfuAI ACCTGC 1 cut(s) 2855
BfuI GTATCC 1 cut(s) 958
BglII AGATCT 1 cut(s) 2048
BisI GCNGC 7 cut(s) 381, 538, 876, 1641, 2022, 2795, 2798
BlnI CCTAGG 1 cut(s) 2716
BlsI GCNGC 7 cut(s) 382, 539, 877, 1642, 2023, 2796, 2799
BmcAI AGTACT 1 cut(s) 2673
Bme1390I CCNGG 1 cut(s) 1206
Bme18I GGWCC 2 cut(s) 19, 1742
BmeRI GACNNNNNGTC 1 cut(s) 2566
BmeT110I CYCGRG 1 cut(s) 960
BmgBI CACGTC 1 cut(s) 2061
BmgT120I GGNCC 4 cut(s) 19, 329, 1428, 1742
BmiI GGNNCC 6 cut(s) 433, 619, 1203, 1915, 2349, 2889
BmrFI CCNGG 1 cut(s) 1206
BmsI GCATC 9 cut(s) 478, 682, 898, 1111, 1549, 1637, 2008, 2443, 2904
BoxI GACNNNNGTC 1 cut(s) 2087
BplI GAGNNNNNCTC 2 cut(s) 2821, 2853
BpmI CTGGAG 1 cut(s) 1629
Bpu10I CCTNAGC 1 cut(s) 2194
Bpu14I TTCGAA 1 cut(s) 1787
BpuEI CTTGAG 3 cut(s) 475, 2065, 2903
BsaHI GRCGYC 1 cut(s) 1287
BsaJI CCNNGG 4 cut(s) 959, 2716, 2764, 2891
BsaWI WCCGGW 1 cut(s) 304
BsaXI ACNNNNNCTCC 4 cut(s) 2697, 2727, 2736, 2766
Bsc4I CCNNNNNNNGG 7 cut(s) 36, 746, 1234, 1275, 2167, 2344, 2674
Bse118I RCCGGY 1 cut(s) 331
Bse1I ACTGG 7 cut(s) 788, 1364, 2186, 2503, 2679, 2694, 2733
Bse3DI GCAATG 7 cut(s) 30, 840, 1030, 1183, 1198, 1754, 1929
BseBI CCWGG 1 cut(s) 1206
BseDI CCNNGG 4 cut(s) 959, 2716, 2764, 2891
BseGI GGATG 6 cut(s) 213, 436, 697, 1148, 1444, 1564
BseLI CCNNNNNNNGG 7 cut(s) 36, 746, 1234, 1275, 2167, 2344, 2674
BseMI GCAATG 7 cut(s) 30, 840, 1030, 1183, 1198, 1754, 1929
BseMII CTCAG 5 cut(s) 181, 588, 1362, 2208, 2882
BseNI ACTGG 7 cut(s) 788, 1364, 2186, 2503, 2679, 2694, 2733
BseSI GKGCMC 1 cut(s) 372
BseXI GCAGC 7 cut(s) 367, 524, 862, 1627, 2008, 2806, 2809
BseYI CCCAGC 7 cut(s) 326, 1074, 1197, 1656, 1827, 1917, 2853
BsgI GTGCAG 3 cut(s) 2799, 2813, 2833
BshFI GGCC 6 cut(s) 57, 331, 984, 1430, 2649, 2763
BsiHKAI GWGCWC 3 cut(s) 372, 550, 1953
BsiHKCI CYCGRG 1 cut(s) 960
BsiSI CCGG 2 cut(s) 305, 332
BslFI GGGAC 2 cut(s) 1298, 2550
BslI CCNNNNNNNGG 7 cut(s) 36, 746, 1234, 1275, 2167, 2344, 2674
BsmAI GTCTC 2 cut(s) 266, 293
BsmFI GGGAC 2 cut(s) 1298, 2550
BsnI GGCC 6 cut(s) 57, 331, 984, 1430, 2649, 2763
BsoBI CYCGRG 1 cut(s) 960
Bsp119I TTCGAA 1 cut(s) 1787
Bsp1286I GDGCHC 3 cut(s) 372, 550, 1953
Bsp143I GATC 9 cut(s) 130, 617, 922, 1057, 1201, 1913, 2048, 2683, 2722
Bsp19I CCATGG 1 cut(s) 2891
BspACI CCGC 2 cut(s) 1139, 1745
BspANI GGCC 6 cut(s) 57, 331, 984, 1430, 2649, 2763
BspCNI CTCAG 5 cut(s) 180, 587, 1363, 2207, 2881
BspHI TCATGA 4 cut(s) 1444, 2002, 2068, 2173
BspLI GGNNCC 6 cut(s) 433, 619, 1203, 1915, 2349, 2889
BspMI ACCTGC 1 cut(s) 2855
BspPI GGATC 8 cut(s) 612, 625, 930, 1052, 1196, 1209, 1908, 1921
BspQI GCTCTTC 2 cut(s) 1748, 2436
BspT104I TTCGAA 1 cut(s) 1787
BspTI CTTAAG 1 cut(s) 2818
BsrDI GCAATG 7 cut(s) 30, 840, 1030, 1183, 1198, 1754, 1929
BsrFI RCCGGY 1 cut(s) 331
BsrI ACTGG 7 cut(s) 788, 1364, 2186, 2503, 2679, 2694, 2733
BssAI RCCGGY 1 cut(s) 331
BssECI CCNNGG 4 cut(s) 959, 2716, 2764, 2891
BssMI GATC 9 cut(s) 130, 617, 922, 1057, 1201, 1913, 2048, 2683, 2722
BssNI GRCGYC 1 cut(s) 1287
BssT1I CCWWGG 3 cut(s) 2716, 2764, 2891
Bst2UI CCWGG 1 cut(s) 1206
Bst6I CTCTTC 4 cut(s) 745, 1748, 2436, 2904
BstACI GRCGYC 1 cut(s) 1287
BstAFI CTTAAG 1 cut(s) 2818
BstBI TTCGAA 1 cut(s) 1787
BstC8I GCNNGC 4 cut(s) 333, 2037, 2647, 2859
BstDSI CCRYGG 1 cut(s) 2891
BstF5I GGATG 6 cut(s) 213, 436, 697, 1148, 1444, 1564
BstH2I RGCGCY 1 cut(s) 338
BstHHI GCGC 1 cut(s) 337
BstKTI GATC 9 cut(s) 133, 620, 925, 1060, 1204, 1916, 2051, 2686, 2725
BstMAI GTCTC 2 cut(s) 266, 293
BstMBI GATC 9 cut(s) 130, 617, 922, 1057, 1201, 1913, 2048, 2683, 2722
BstMWI GCNNNNNNNGC 1 cut(s) 332
BstNI CCWGG 1 cut(s) 1206
BstNSI RCATGY 4 cut(s) 785, 1581, 2039, 2483
BstPAI GACNNNNGTC 1 cut(s) 2087
BstSCI CCNGG 1 cut(s) 1204
BstSFI CTRYAG 2 cut(s) 541, 1308
BstSLI GKGCMC 1 cut(s) 372
BstV1I GCAGC 7 cut(s) 367, 524, 862, 1627, 2008, 2806, 2809
BstX2I RGATCY 4 cut(s) 617, 1201, 1913, 2048
BstYI RGATCY 4 cut(s) 617, 1201, 1913, 2048
BsuI GTATCC 1 cut(s) 958
BsuRI GGCC 6 cut(s) 57, 331, 984, 1430, 2649, 2763
BtgI CCRYGG 1 cut(s) 2891
BtrI CACGTC 1 cut(s) 2061
BtsCI GGATG 6 cut(s) 213, 436, 697, 1148, 1444, 1564
BtsI GCAGTG 2 cut(s) 907, 1692
BtsIMutI CAGTG 7 cut(s) 871, 907, 1671, 1690, 1692, 1870, 2556
BveI ACCTGC 1 cut(s) 2855
Cac8I GCNNGC 4 cut(s) 333, 2037, 2647, 2859
CaiI CAGNNNCTG 2 cut(s) 794, 1370
CciI TCATGA 4 cut(s) 1444, 2002, 2068, 2173
CfoI GCGC 1 cut(s) 337
Cfr10I RCCGGY 1 cut(s) 331
Cfr13I GGNCC 4 cut(s) 19, 329, 1428, 1742
CseI GACGC 3 cut(s) 867, 1295, 1499
Csp6I GTAC 6 cut(s) 956, 1136, 2113, 2363, 2591, 2672
CviQI GTAC 6 cut(s) 956, 1136, 2113, 2363, 2591, 2672
DpnI GATC 9 cut(s) 132, 619, 924, 1059, 1203, 1915, 2050, 2685, 2724
DpnII GATC 9 cut(s) 130, 617, 922, 1057, 1201, 1913, 2048, 2683, 2722
DriI GACNNNNNGTC 1 cut(s) 2566
EaeI YGGCCR 1 cut(s) 2761
Eam1104I CTCTTC 4 cut(s) 745, 1748, 2436, 2904
Eam1105I GACNNNNNGTC 1 cut(s) 2566
EarI CTCTTC 4 cut(s) 745, 1748, 2436, 2904
Ecl136II GAGCTC 1 cut(s) 1951
Eco130I CCWWGG 3 cut(s) 2716, 2764, 2891
Eco147I AGGCCT 2 cut(s) 57, 2649
Eco24I GRGCYC 1 cut(s) 1953
Eco47I GGWCC 2 cut(s) 19, 1742
Eco53kI GAGCTC 1 cut(s) 1951
Eco57I CTGAAG 2 cut(s) 936, 1026
Eco88I CYCGRG 1 cut(s) 960
EcoICRI GAGCTC 1 cut(s) 1951
EcoO109I RGGNCCY 1 cut(s) 1428
EcoRI GAATTC 1 cut(s) 1837
EcoRII CCWGG 1 cut(s) 1204
EcoT14I CCWWGG 3 cut(s) 2716, 2764, 2891
EcoT22I ATGCAT 2 cut(s) 1542, 2314
EcoT38I GRGCYC 1 cut(s) 1953
ErhI CCWWGG 3 cut(s) 2716, 2764, 2891
FalI AAGNNNNNCTT 2 cut(s) 2204, 2236
FaqI GGGAC 2 cut(s) 1298, 2550
FauNDI CATATG 2 cut(s) 135, 700
FbaI TGATCA 3 cut(s) 130, 2683, 2722
FblI GTMKAC 1 cut(s) 1670
Fnu4HI GCNGC 7 cut(s) 381, 538, 876, 1641, 2022, 2795, 2798
FokI GGATG 6 cut(s) 220, 423, 704, 1135, 1451, 1571
FriOI GRGCYC 1 cut(s) 1953
Fsp4HI GCNGC 7 cut(s) 381, 538, 876, 1641, 2022, 2795, 2798
FspBI CTAG 7 cut(s) 195, 1064, 2064, 2274, 2388, 2411, 2717
GlaI GCGC 1 cut(s) 336
GluI GCNGC 7 cut(s) 381, 538, 876, 1641, 2022, 2795, 2798
GsaI CCCAGC 7 cut(s) 330, 1078, 1201, 1660, 1831, 1921, 2857
GsuI CTGGAG 1 cut(s) 1629
HaeII RGCGCY 1 cut(s) 338
HaeIII GGCC 6 cut(s) 57, 331, 984, 1430, 2649, 2763
HapII CCGG 2 cut(s) 305, 332
HgaI GACGC 3 cut(s) 867, 1295, 1499
HhaI GCGC 1 cut(s) 337
Hin1I GRCGYC 1 cut(s) 1287
Hin6I GCGC 1 cut(s) 335
HinP1I GCGC 1 cut(s) 335
HincII GTYRAC 1 cut(s) 1571
HindII GTYRAC 1 cut(s) 1571
HpaII CCGG 2 cut(s) 305, 332
HphI GGTGA 6 cut(s) 119, 1079, 1232, 2612, 2693, 2732
Hpy166II GTNNAC 6 cut(s) 370, 508, 1025, 1571, 1671, 1868
Hpy8I GTNNAC 6 cut(s) 370, 508, 1025, 1571, 1671, 1868
HpyCH4IV ACGT 3 cut(s) 770, 2060, 2188
HpyF10VI GCNNNNNNNGC 1 cut(s) 332
HpySE526I ACGT 3 cut(s) 770, 2060, 2188
Hsp92I GRCGYC 1 cut(s) 1287
HspAI GCGC 1 cut(s) 335
KroI GCCGGC 1 cut(s) 331
KroNI GCCGGC 1 cut(s) 333
Ksp22I TGATCA 3 cut(s) 130, 2683, 2722
Kzo9I GATC 9 cut(s) 130, 617, 922, 1057, 1201, 1913, 2048, 2683, 2722
LguI GCTCTTC 2 cut(s) 1748, 2436
LmnI GCTCC 3 cut(s) 437, 1648, 2829
Lsp1109I GCAGC 7 cut(s) 367, 524, 862, 1627, 2008, 2806, 2809
LweI GCATC 9 cut(s) 478, 682, 898, 1111, 1549, 1637, 2008, 2443, 2904
MaeI CTAG 7 cut(s) 195, 1064, 2064, 2274, 2388, 2411, 2717
MaeII ACGT 3 cut(s) 770, 2060, 2188
MaeIII GTNAC 5 cut(s) 860, 1385, 2080, 2089, 2216
MalI GATC 9 cut(s) 132, 619, 924, 1059, 1203, 1915, 2050, 2685, 2724
MboI GATC 9 cut(s) 130, 617, 922, 1057, 1201, 1913, 2048, 2683, 2722
MflI RGATCY 4 cut(s) 617, 1201, 1913, 2048
MhlI GDGCHC 3 cut(s) 372, 550, 1953
MlsI TGGCCA 1 cut(s) 2763
MluNI TGGCCA 1 cut(s) 2763
MlyI GAGTC 3 cut(s) 1469, 1979, 2860
MmeI TCCRAC 3 cut(s) 971, 1491, 2335
Mox20I TGGCCA 1 cut(s) 2763
Mph1103I ATGCAT 2 cut(s) 1542, 2314
MroNI GCCGGC 1 cut(s) 331
MscI TGGCCA 1 cut(s) 2763
MseI TTAA 9 cut(s) 92, 473, 1230, 1379, 1584, 1713, 1884, 2294, 2819
MslI CAYNNNNRTG 6 cut(s) 441, 447, 1535, 1578, 2484, 2634
Msp20I TGGCCA 1 cut(s) 2763
MspA1I CMGCKG 2 cut(s) 2597, 2857
MspCI CTTAAG 1 cut(s) 2818
MspI CCGG 2 cut(s) 305, 332
MspR9I CCNGG 1 cut(s) 1206
MvaI CCWGG 1 cut(s) 1206
MwoI GCNNNNNNNGC 1 cut(s) 332
NaeI GCCGGC 1 cut(s) 333
NcoI CCATGG 1 cut(s) 2891
NdeI CATATG 2 cut(s) 135, 700
NdeII GATC 9 cut(s) 130, 617, 922, 1057, 1201, 1913, 2048, 2683, 2722
NgoMIV GCCGGC 1 cut(s) 331
NlaIV GGNNCC 6 cut(s) 433, 619, 1203, 1915, 2349, 2889
NmuCI GTSAC 4 cut(s) 860, 1385, 2080, 2089
NsiI ATGCAT 2 cut(s) 1542, 2314
NspI RCATGY 4 cut(s) 785, 1581, 2039, 2483
NspV TTCGAA 1 cut(s) 1787
PaeI GCATGC 1 cut(s) 2039
PagI TCATGA 4 cut(s) 1444, 2002, 2068, 2173
PaqCI CACCTGC 1 cut(s) 2855
PceI AGGCCT 2 cut(s) 57, 2649
PciI ACATGT 3 cut(s) 781, 1577, 2479
PciSI GCTCTTC 2 cut(s) 1748, 2436
PdiI GCCGGC 1 cut(s) 333
PfeI GAWTC 8 cut(s) 421, 650, 1098, 1160, 1343, 1652, 1874, 2072
PflFI GACNNNGTC 1 cut(s) 2869
PflMI CCANNNNNTGG 2 cut(s) 36, 2674
PfoI TCCNGGA 1 cut(s) 1204
PkrI GCNGC 7 cut(s) 382, 539, 877, 1642, 2023, 2796, 2799
PleI GAGTC 3 cut(s) 1468, 1978, 2860
PpsI GAGTC 3 cut(s) 1468, 1978, 2860
PscI ACATGT 3 cut(s) 781, 1577, 2479
PshAI GACNNNNGTC 1 cut(s) 2087
Psp124BI GAGCTC 1 cut(s) 1953
Psp6I CCWGG 1 cut(s) 1204
PspFI CCCAGC 7 cut(s) 326, 1074, 1197, 1656, 1827, 1917, 2853
PspGI CCWGG 1 cut(s) 1204
PspN4I GGNNCC 6 cut(s) 433, 619, 1203, 1915, 2349, 2889
PspPI GGNCC 4 cut(s) 19, 329, 1428, 1742
PstNI CAGNNNCTG 2 cut(s) 794, 1370
PsuI RGATCY 4 cut(s) 617, 1201, 1913, 2048
PsyI GACNNNGTC 1 cut(s) 2869
PvuII CAGCTG 2 cut(s) 2597, 2857
RsaI GTAC 6 cut(s) 957, 1137, 2114, 2364, 2592, 2673
RsaNI GTAC 6 cut(s) 956, 1136, 2113, 2363, 2591, 2672
RseI CAYNNNNRTG 6 cut(s) 441, 447, 1535, 1578, 2484, 2634
SacI GAGCTC 1 cut(s) 1953
SapI GCTCTTC 2 cut(s) 1748, 2436
SaqAI TTAA 9 cut(s) 92, 473, 1230, 1379, 1584, 1713, 1884, 2294, 2819
SatI GCNGC 7 cut(s) 381, 538, 876, 1641, 2022, 2795, 2798
Sau3AI GATC 9 cut(s) 130, 617, 922, 1057, 1201, 1913, 2048, 2683, 2722
Sau96I GGNCC 4 cut(s) 19, 329, 1428, 1742
ScaI AGTACT 1 cut(s) 2673
SchI GAGTC 3 cut(s) 1469, 1979, 2860
ScrFI CCNGG 1 cut(s) 1206
SduI GDGCHC 3 cut(s) 372, 550, 1953
SfaNI GCATC 9 cut(s) 478, 682, 898, 1111, 1549, 1637, 2008, 2443, 2904
SfcI CTRYAG 2 cut(s) 541, 1308
SfuI TTCGAA 1 cut(s) 1787
SinI GGWCC 2 cut(s) 19, 1742
SmiMI CAYNNNNRTG 6 cut(s) 441, 447, 1535, 1578, 2484, 2634
SmlI CTYRAG 4 cut(s) 454, 2044, 2818, 2918
SmoI CTYRAG 4 cut(s) 454, 2044, 2818, 2918
SphI GCATGC 1 cut(s) 2039
SseBI AGGCCT 2 cut(s) 57, 2649
SsiI CCGC 2 cut(s) 1139, 1745
SspI AATATT 1 cut(s) 2515
SspMI CTAG 7 cut(s) 195, 1064, 2064, 2274, 2388, 2411, 2717
SstI GAGCTC 1 cut(s) 1953
StuI AGGCCT 2 cut(s) 57, 2649
StyD4I CCNGG 1 cut(s) 1204
StyI CCWWGG 3 cut(s) 2716, 2764, 2891
TaiI ACGT 3 cut(s) 773, 2063, 2191
TaqI TCGA 2 cut(s) 419, 1787
TatI WGTACW 3 cut(s) 2112, 2362, 2671
TfiI GAWTC 8 cut(s) 421, 650, 1098, 1160, 1343, 1652, 1874, 2072
Tru1I TTAA 9 cut(s) 92, 473, 1230, 1379, 1584, 1713, 1884, 2294, 2819
Tru9I TTAA 9 cut(s) 92, 473, 1230, 1379, 1584, 1713, 1884, 2294, 2819
TscAI CASTG 7 cut(s) 871, 907, 1671, 1690, 1699, 1870, 2563
TseFI GTSAC 4 cut(s) 860, 1385, 2080, 2089
TseI GCWGC 7 cut(s) 380, 537, 875, 1640, 2021, 2794, 2797
Tsp45I GTSAC 4 cut(s) 860, 1385, 2080, 2089
TspGWI ACGGA 1 cut(s) 110
TspRI CASTG 7 cut(s) 871, 907, 1671, 1690, 1699, 1870, 2563
Tth111I GACNNNGTC 1 cut(s) 2869
Van91I CCANNNNNTGG 2 cut(s) 36, 2674
Vha464I CTTAAG 1 cut(s) 2818
VneI GTGCAC 1 cut(s) 368
VpaK11BI GGWCC 2 cut(s) 19, 1742
XapI RAATTY 3 cut(s) 308, 735, 1837
XceI RCATGY 4 cut(s) 785, 1581, 2039, 2483
XcmI CCANNNNNNNNNTGG 2 cut(s) 1951, 2771
XmaJI CCTAGG 1 cut(s) 2716
XmiI GTMKAC 1 cut(s) 1670
XspI CTAG 7 cut(s) 195, 1064, 2064, 2274, 2388, 2411, 2717
ZrmI AGTACT 1 cut(s) 2673
Zsp2I ATGCAT 2 cut(s) 1542, 2314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.