PHD zinc finger
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1458 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 36, 533 |
| AccII | CGCG | 1 cut(s) | 550 |
| AciI | CCGC | 8 cut(s) | 27, 139, 217, 220, 550, 614, 682, 692 |
| AclWI | GGATC | 3 cut(s) | 1038, 1051, 1588 |
| AcsI | RAATTY | 3 cut(s) | 767, 890, 1445 |
| AfaI | GTAC | 2 cut(s) | 1020, 1399 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 36, 216, 533, 1144 |
| AgeI | ACCGGT | 1 cut(s) | 1463 |
| AgsI | TTSAA | 4 cut(s) | 542, 895, 1016, 1520 |
| AjnI | CCWGG | 1 cut(s) | 1126 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 218, 250 |
| AluBI | AGCT | 9 cut(s) | 66, 234, 252, 365, 394, 1308, 1431, 1523, 1535 |
| AluI | AGCT | 9 cut(s) | 66, 234, 252, 365, 394, 1308, 1431, 1523, 1535 |
| Alw21I | GWGCWC | 3 cut(s) | 357, 385, 1310 |
| Alw26I | GTCTC | 3 cut(s) | 278, 947, 973 |
| AlwI | GGATC | 3 cut(s) | 1038, 1051, 1588 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 296 |
| AoxI | GGCC | 2 cut(s) | 45, 1560 |
| ApeKI | GCWGC | 5 cut(s) | 252, 431, 513, 958, 1431 |
| ApoI | RAATTY | 3 cut(s) | 767, 890, 1445 |
| AseI | ATTAAT | 1 cut(s) | 1194 |
| AsiGI | ACCGGT | 1 cut(s) | 1463 |
| AspLEI | GCGC | 4 cut(s) | 17, 194, 550, 566 |
| AspS9I | GGNCC | 5 cut(s) | 46, 222, 1258, 1552, 1560 |
| AsuC2I | CCSGG | 1 cut(s) | 1540 |
| AsuHPI | GGTGA | 1 cut(s) | 1478 |
| AsuII | TTCGAA | 2 cut(s) | 237, 1340 |
| AvaII | GGWCC | 3 cut(s) | 222, 1258, 1552 |
| BaeGI | GKGCMC | 1 cut(s) | 802 |
| BamHI | GGATCC | 1 cut(s) | 1043 |
| BanII | GRGCYC | 2 cut(s) | 345, 1310 |
| BbsI | GAAGAC | 1 cut(s) | 1241 |
| Bbv12I | GWGCWC | 3 cut(s) | 357, 385, 1310 |
| BbvI | GCAGC | 5 cut(s) | 239, 418, 500, 970, 1418 |
| BccI | CCATC | 8 cut(s) | 301, 482, 655, 769, 893, 1034, 1219, 1241 |
| BceAI | ACGGC | 1 cut(s) | 65 |
| BciT130I | CCWGG | 1 cut(s) | 1128 |
| BciVI | GTATCC | 1 cut(s) | 1234 |
| BcnI | CCSGG | 1 cut(s) | 1540 |
| BcoDI | GTCTC | 3 cut(s) | 278, 947, 973 |
| BfaI | CTAG | 4 cut(s) | 417, 803, 1499, 1577 |
| BfoI | RGCGCY | 1 cut(s) | 195 |
| BfuI | GTATCC | 1 cut(s) | 1234 |
| BglII | AGATCT | 1 cut(s) | 1501 |
| BisI | GCNGC | 6 cut(s) | 218, 253, 432, 514, 959, 1432 |
| BlsI | GCNGC | 6 cut(s) | 219, 254, 433, 515, 960, 1433 |
| Bme1390I | CCNGG | 2 cut(s) | 1128, 1540 |
| Bme18I | GGWCC | 3 cut(s) | 222, 1258, 1552 |
| BmgT120I | GGNCC | 5 cut(s) | 46, 222, 1258, 1552, 1560 |
| BmiI | GGNNCC | 2 cut(s) | 1045, 1441 |
| BmrFI | CCNGG | 2 cut(s) | 1128, 1540 |
| BmsI | GCATC | 4 cut(s) | 161, 190, 655, 838 |
| BpiI | GAAGAC | 1 cut(s) | 1241 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1169, 1201 |
| BpmI | CTGGAG | 2 cut(s) | 967, 1110 |
| Bpu14I | TTCGAA | 2 cut(s) | 237, 1340 |
| BpuEI | CTTGAG | 1 cut(s) | 1324 |
| BpuMI | CCSGG | 1 cut(s) | 1540 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1500 |
| BsaI | GGTCTC | 1 cut(s) | 973 |
| BsaJI | CCNNGG | 1 cut(s) | 1284 |
| BsaWI | WCCGGW | 1 cut(s) | 1463 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1192, 1222 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 36, 216, 533, 1144 |
| Bse118I | RCCGGY | 1 cut(s) | 1463 |
| Bse1I | ACTGG | 2 cut(s) | 734, 984 |
| Bse3DI | GCAATG | 4 cut(s) | 30, 566, 1059, 1239 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1500 |
| BseBI | CCWGG | 1 cut(s) | 1128 |
| BseDI | CCNNGG | 1 cut(s) | 1284 |
| BseGI | GGATG | 9 cut(s) | 312, 421, 622, 660, 670, 780, 814, 853, 1024 |
| BseJI | GATNNNNATC | 1 cut(s) | 1500 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 36, 216, 533, 1144 |
| BseMI | GCAATG | 4 cut(s) | 30, 566, 1059, 1239 |
| BseMII | CTCAG | 3 cut(s) | 244, 609, 1515 |
| BseNI | ACTGG | 2 cut(s) | 734, 984 |
| BseRI | GAGGAG | 5 cut(s) | 195, 327, 330, 933, 1113 |
| BseSI | GKGCMC | 1 cut(s) | 802 |
| BseXI | GCAGC | 5 cut(s) | 239, 418, 500, 970, 1418 |
| BseYI | CCCAGC | 2 cut(s) | 476, 1269 |
| Bsh1236I | CGCG | 1 cut(s) | 550 |
| BshFI | GGCC | 2 cut(s) | 47, 1562 |
| BshTI | ACCGGT | 1 cut(s) | 1463 |
| BsiHKAI | GWGCWC | 3 cut(s) | 357, 385, 1310 |
| BsiSI | CCGG | 3 cut(s) | 214, 1464, 1540 |
| BslFI | GGGAC | 2 cut(s) | 740, 1464 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 36, 216, 533, 1144 |
| BsmAI | GTCTC | 3 cut(s) | 278, 947, 973 |
| BsmBI | CGTCTC | 1 cut(s) | 947 |
| BsmFI | GGGAC | 2 cut(s) | 740, 1464 |
| BsnI | GGCC | 2 cut(s) | 47, 1562 |
| Bso31I | GGTCTC | 1 cut(s) | 973 |
| Bsp119I | TTCGAA | 2 cut(s) | 237, 1340 |
| Bsp1286I | GDGCHC | 5 cut(s) | 345, 357, 385, 802, 1310 |
| Bsp143I | GATC | 7 cut(s) | 102, 811, 1043, 1351, 1495, 1501, 1580 |
| Bsp19I | CCATGG | 1 cut(s) | 1284 |
| BspACI | CCGC | 8 cut(s) | 27, 139, 217, 220, 550, 614, 682, 692 |
| BspANI | GGCC | 2 cut(s) | 47, 1562 |
| BspCNI | CTCAG | 3 cut(s) | 243, 608, 1516 |
| BspFNI | CGCG | 1 cut(s) | 550 |
| BspHI | TCATGA | 1 cut(s) | 1423 |
| BspLI | GGNNCC | 2 cut(s) | 1045, 1441 |
| BspPI | GGATC | 3 cut(s) | 1038, 1051, 1588 |
| BspQI | GCTCTTC | 1 cut(s) | 1049 |
| BspT104I | TTCGAA | 2 cut(s) | 237, 1340 |
| BspTNI | GGTCTC | 1 cut(s) | 973 |
| BsrDI | GCAATG | 4 cut(s) | 30, 566, 1059, 1239 |
| BsrFI | RCCGGY | 1 cut(s) | 1463 |
| BsrI | ACTGG | 2 cut(s) | 734, 984 |
| BssAI | RCCGGY | 1 cut(s) | 1463 |
| BssECI | CCNNGG | 1 cut(s) | 1284 |
| BssMI | GATC | 7 cut(s) | 102, 811, 1043, 1351, 1495, 1501, 1580 |
| BssT1I | CCWWGG | 1 cut(s) | 1284 |
| Bst2UI | CCWGG | 1 cut(s) | 1128 |
| Bst4CI | ACNGT | 2 cut(s) | 1175, 1478 |
| Bst6I | CTCTTC | 2 cut(s) | 691, 1049 |
| BstBI | TTCGAA | 2 cut(s) | 237, 1340 |
| BstC8I | GCNNGC | 2 cut(s) | 64, 1139 |
| BstDEI | CTNAG | 3 cut(s) | 230, 595, 1524 |
| BstDSI | CCRYGG | 1 cut(s) | 1284 |
| BstF5I | GGATG | 9 cut(s) | 312, 421, 622, 660, 670, 780, 814, 853, 1024 |
| BstFNI | CGCG | 1 cut(s) | 550 |
| BstH2I | RGCGCY | 1 cut(s) | 195 |
| BstHHI | GCGC | 4 cut(s) | 17, 194, 550, 566 |
| BstKTI | GATC | 7 cut(s) | 105, 814, 1046, 1354, 1498, 1504, 1583 |
| BstMAI | GTCTC | 3 cut(s) | 278, 947, 973 |
| BstMBI | GATC | 7 cut(s) | 102, 811, 1043, 1351, 1495, 1501, 1580 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 53, 200 |
| BstNI | CCWGG | 1 cut(s) | 1128 |
| BstSCI | CCNGG | 2 cut(s) | 1126, 1538 |
| BstSLI | GKGCMC | 1 cut(s) | 802 |
| BstUI | CGCG | 1 cut(s) | 550 |
| BstV1I | GCAGC | 5 cut(s) | 239, 418, 500, 970, 1418 |
| BstV2I | GAAGAC | 1 cut(s) | 1241 |
| BstX2I | RGATCY | 2 cut(s) | 1043, 1501 |
| BstYI | RGATCY | 2 cut(s) | 1043, 1501 |
| BsuI | GTATCC | 1 cut(s) | 1234 |
| BsuRI | GGCC | 2 cut(s) | 47, 1562 |
| BtgI | CCRYGG | 1 cut(s) | 1284 |
| BtgZI | GCGATG | 2 cut(s) | 184, 1095 |
| BtsCI | GGATG | 9 cut(s) | 312, 421, 622, 660, 670, 780, 814, 853, 1024 |
| BtsIMutI | CAGTG | 1 cut(s) | 1180 |
| Cac8I | GCNNGC | 2 cut(s) | 64, 1139 |
| CaiI | CAGNNNCTG | 1 cut(s) | 296 |
| CciI | TCATGA | 1 cut(s) | 1423 |
| CfoI | GCGC | 4 cut(s) | 17, 194, 550, 566 |
| Cfr10I | RCCGGY | 1 cut(s) | 1463 |
| Cfr13I | GGNCC | 5 cut(s) | 46, 222, 1258, 1552, 1560 |
| CseI | GACGC | 2 cut(s) | 136, 964 |
| Csp6I | GTAC | 2 cut(s) | 1019, 1398 |
| CspAI | ACCGGT | 1 cut(s) | 1463 |
| CviAII | CATG | 6 cut(s) | 950, 1001, 1181, 1285, 1424, 1435 |
| CviQI | GTAC | 2 cut(s) | 1019, 1398 |
| DdeI | CTNAG | 3 cut(s) | 230, 595, 1524 |
| DpnI | GATC | 7 cut(s) | 104, 813, 1045, 1353, 1497, 1503, 1582 |
| DpnII | GATC | 7 cut(s) | 102, 811, 1043, 1351, 1495, 1501, 1580 |
| Eam1104I | CTCTTC | 2 cut(s) | 691, 1049 |
| EarI | CTCTTC | 2 cut(s) | 691, 1049 |
| EciI | GGCGGA | 2 cut(s) | 16, 629 |
| Ecl136II | GAGCTC | 1 cut(s) | 1308 |
| Eco130I | CCWWGG | 1 cut(s) | 1284 |
| Eco24I | GRGCYC | 2 cut(s) | 345, 1310 |
| Eco31I | GGTCTC | 1 cut(s) | 973 |
| Eco47I | GGWCC | 3 cut(s) | 222, 1258, 1552 |
| Eco53kI | GAGCTC | 1 cut(s) | 1308 |
| EcoICRI | GAGCTC | 1 cut(s) | 1308 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1258, 1552 |
| EcoRII | CCWGG | 1 cut(s) | 1126 |
| EcoT14I | CCWWGG | 1 cut(s) | 1284 |
| EcoT38I | GRGCYC | 2 cut(s) | 345, 1310 |
| ErhI | CCWWGG | 1 cut(s) | 1284 |
| Esp3I | CGTCTC | 1 cut(s) | 947 |
| FaeI | CATG | 6 cut(s) | 953, 1004, 1184, 1288, 1427, 1438 |
| FaqI | GGGAC | 2 cut(s) | 740, 1464 |
| FatI | CATG | 6 cut(s) | 949, 1000, 1180, 1284, 1423, 1434 |
| FauI | CCCGC | 1 cut(s) | 685 |
| FauNDI | CATATG | 2 cut(s) | 427, 1492 |
| Fnu4HI | GCNGC | 6 cut(s) | 218, 253, 432, 514, 959, 1432 |
| FokI | GGATG | 9 cut(s) | 319, 408, 629, 667, 677, 787, 821, 860, 1011 |
| FriOI | GRGCYC | 2 cut(s) | 345, 1310 |
| Fsp4HI | GCNGC | 6 cut(s) | 218, 253, 432, 514, 959, 1432 |
| FspBI | CTAG | 4 cut(s) | 417, 803, 1499, 1577 |
| GlaI | GCGC | 4 cut(s) | 16, 193, 549, 565 |
| GluI | GCNGC | 6 cut(s) | 218, 253, 432, 514, 959, 1432 |
| GsaI | CCCAGC | 2 cut(s) | 480, 1273 |
| GsuI | CTGGAG | 2 cut(s) | 967, 1110 |
| HaeII | RGCGCY | 1 cut(s) | 195 |
| HaeIII | GGCC | 2 cut(s) | 47, 1562 |
| HapII | CCGG | 3 cut(s) | 214, 1464, 1540 |
| HgaI | GACGC | 2 cut(s) | 136, 964 |
| HhaI | GCGC | 4 cut(s) | 17, 194, 550, 566 |
| Hin1II | CATG | 6 cut(s) | 953, 1004, 1184, 1288, 1427, 1438 |
| Hin6I | GCGC | 4 cut(s) | 15, 192, 548, 564 |
| HinP1I | GCGC | 4 cut(s) | 15, 192, 548, 564 |
| HincII | GTYRAC | 1 cut(s) | 151 |
| HindII | GTYRAC | 1 cut(s) | 151 |
| HindIII | AAGCTT | 2 cut(s) | 392, 1533 |
| HpaII | CCGG | 3 cut(s) | 214, 1464, 1540 |
| HphI | GGTGA | 1 cut(s) | 1478 |
| Hpy166II | GTNNAC | 1 cut(s) | 151 |
| Hpy188I | TCNGA | 7 cut(s) | 247, 298, 387, 598, 766, 774, 1165 |
| Hpy188III | TCNNGA | 9 cut(s) | 197, 815, 917, 1097, 1303, 1424, 1499, 1517, 1590 |
| Hpy8I | GTNNAC | 1 cut(s) | 151 |
| Hpy99I | CGWCG | 2 cut(s) | 134, 1283 |
| HpyAV | CCTTC | 3 cut(s) | 1367, 1492, 1543 |
| HpyCH4III | ACNGT | 2 cut(s) | 1175, 1478 |
| HpyCH4IV | ACGT | 1 cut(s) | 794 |
| HpyCH4V | TGCA | 6 cut(s) | 434, 576, 851, 1319, 1434, 1490 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 53, 200 |
| HpyF3I | CTNAG | 3 cut(s) | 230, 595, 1524 |
| HpySE526I | ACGT | 1 cut(s) | 794 |
| Hsp92II | CATG | 6 cut(s) | 953, 1004, 1184, 1288, 1427, 1438 |
| HspAI | GCGC | 4 cut(s) | 15, 192, 548, 564 |
| Kzo9I | GATC | 7 cut(s) | 102, 811, 1043, 1351, 1495, 1501, 1580 |
| LguI | GCTCTTC | 1 cut(s) | 1049 |
| LmnI | GCTCC | 4 cut(s) | 208, 529, 946, 1126 |
| Lsp1109I | GCAGC | 5 cut(s) | 239, 418, 500, 970, 1418 |
| LweI | GCATC | 4 cut(s) | 161, 190, 655, 838 |
| MaeI | CTAG | 4 cut(s) | 417, 803, 1499, 1577 |
| MaeII | ACGT | 1 cut(s) | 794 |
| MaeIII | GTNAC | 2 cut(s) | 989, 1466 |
| MalI | GATC | 7 cut(s) | 104, 813, 1045, 1353, 1497, 1503, 1582 |
| MboI | GATC | 7 cut(s) | 102, 811, 1043, 1351, 1495, 1501, 1580 |
| MflI | RGATCY | 2 cut(s) | 1043, 1501 |
| MhlI | GDGCHC | 5 cut(s) | 345, 357, 385, 802, 1310 |
| MluCI | AATT | 5 cut(s) | 182, 239, 767, 890, 1445 |
| MlyI | GAGTC | 4 cut(s) | 32, 974, 1178, 1318 |
| MmeI | TCCRAC | 2 cut(s) | 225, 687 |
| MseI | TTAA | 4 cut(s) | 396, 504, 1194, 1544 |
| MslI | CAYNNNNRTG | 1 cut(s) | 426 |
| MspI | CCGG | 3 cut(s) | 214, 1464, 1540 |
| MspR9I | CCNGG | 2 cut(s) | 1128, 1540 |
| MvaI | CCWGG | 1 cut(s) | 1128 |
| MvnI | CGCG | 1 cut(s) | 550 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 53, 200 |
| NciI | CCSGG | 1 cut(s) | 1540 |
| NcoI | CCATGG | 1 cut(s) | 1284 |
| NdeI | CATATG | 2 cut(s) | 427, 1492 |
| NdeII | GATC | 7 cut(s) | 102, 811, 1043, 1351, 1495, 1501, 1580 |
| NlaIII | CATG | 6 cut(s) | 953, 1004, 1184, 1288, 1427, 1438 |
| NlaIV | GGNNCC | 2 cut(s) | 1045, 1441 |
| NmuCI | GTSAC | 1 cut(s) | 1466 |
| NspV | TTCGAA | 2 cut(s) | 237, 1340 |
| PagI | TCATGA | 1 cut(s) | 1423 |
| PciSI | GCTCTTC | 1 cut(s) | 1049 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 195 |
| PfeI | GAWTC | 7 cut(s) | 88, 293, 401, 413, 713, 1160, 1251 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 36, 533 |
| PinAI | ACCGGT | 1 cut(s) | 1463 |
| PkrI | GCNGC | 6 cut(s) | 219, 254, 433, 515, 960, 1433 |
| PleI | GAGTC | 4 cut(s) | 31, 974, 1178, 1318 |
| PpsI | GAGTC | 4 cut(s) | 31, 974, 1178, 1318 |
| PpuMI | RGGWCCY | 2 cut(s) | 1258, 1552 |
| PshBI | ATTAAT | 1 cut(s) | 1194 |
| PsiI | TTATAA | 1 cut(s) | 1458 |
| Psp124BI | GAGCTC | 1 cut(s) | 1310 |
| Psp5II | RGGWCCY | 2 cut(s) | 1258, 1552 |
| Psp6I | CCWGG | 1 cut(s) | 1126 |
| PspFI | CCCAGC | 2 cut(s) | 476, 1269 |
| PspGI | CCWGG | 1 cut(s) | 1126 |
| PspN4I | GGNNCC | 2 cut(s) | 1045, 1441 |
| PspPI | GGNCC | 5 cut(s) | 46, 222, 1258, 1552, 1560 |
| PspPPI | RGGWCCY | 2 cut(s) | 1258, 1552 |
| PstNI | CAGNNNCTG | 1 cut(s) | 296 |
| PsuI | RGATCY | 2 cut(s) | 1043, 1501 |
| RsaI | GTAC | 2 cut(s) | 1020, 1399 |
| RsaNI | GTAC | 2 cut(s) | 1019, 1398 |
| RseI | CAYNNNNRTG | 1 cut(s) | 426 |
| SacI | GAGCTC | 1 cut(s) | 1310 |
| SapI | GCTCTTC | 1 cut(s) | 1049 |
| SaqAI | TTAA | 4 cut(s) | 396, 504, 1194, 1544 |
| SatI | GCNGC | 6 cut(s) | 218, 253, 432, 514, 959, 1432 |
| Sau3AI | GATC | 7 cut(s) | 102, 811, 1043, 1351, 1495, 1501, 1580 |
| Sau96I | GGNCC | 5 cut(s) | 46, 222, 1258, 1552, 1560 |
| SchI | GAGTC | 4 cut(s) | 32, 974, 1178, 1318 |
| ScrFI | CCNGG | 2 cut(s) | 1128, 1540 |
| SduI | GDGCHC | 5 cut(s) | 345, 357, 385, 802, 1310 |
| SfaNI | GCATC | 4 cut(s) | 161, 190, 655, 838 |
| SfuI | TTCGAA | 2 cut(s) | 237, 1340 |
| SinI | GGWCC | 3 cut(s) | 222, 1258, 1552 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 426 |
| SmlI | CTYRAG | 1 cut(s) | 1303 |
| SmoI | CTYRAG | 1 cut(s) | 1303 |
| Sse9I | AATT | 5 cut(s) | 182, 239, 767, 890, 1445 |
| SsiI | CCGC | 8 cut(s) | 27, 139, 217, 220, 550, 614, 682, 692 |
| SspMI | CTAG | 4 cut(s) | 417, 803, 1499, 1577 |
| SstI | GAGCTC | 1 cut(s) | 1310 |
| StyD4I | CCNGG | 2 cut(s) | 1126, 1538 |
| StyI | CCWWGG | 1 cut(s) | 1284 |
| TaaI | ACNGT | 2 cut(s) | 1175, 1478 |
| TaiI | ACGT | 1 cut(s) | 797 |
| TaqI | TCGA | 5 cut(s) | 51, 68, 86, 237, 1340 |
| TasI | AATT | 5 cut(s) | 182, 239, 767, 890, 1445 |
| TauI | GCSGC | 1 cut(s) | 220 |
| TfiI | GAWTC | 7 cut(s) | 88, 293, 401, 413, 713, 1160, 1251 |
| Tru1I | TTAA | 4 cut(s) | 396, 504, 1194, 1544 |
| Tru9I | TTAA | 4 cut(s) | 396, 504, 1194, 1544 |
| TscAI | CASTG | 1 cut(s) | 1180 |
| TseFI | GTSAC | 1 cut(s) | 1466 |
| TseI | GCWGC | 5 cut(s) | 252, 431, 513, 958, 1431 |
| Tsp45I | GTSAC | 1 cut(s) | 1466 |
| TspDTI | ATGAA | 7 cut(s) | 573, 633, 671, 705, 998, 1386, 1440 |
| TspGWI | ACGGA | 1 cut(s) | 1523 |
| TspRI | CASTG | 1 cut(s) | 1180 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 36, 533 |
| VpaK11BI | GGWCC | 3 cut(s) | 222, 1258, 1552 |
| VspI | ATTAAT | 1 cut(s) | 1194 |
| XapI | RAATTY | 3 cut(s) | 767, 890, 1445 |
| XbaI | TCTAGA | 1 cut(s) | 1498 |
| XspI | CTAG | 4 cut(s) | 417, 803, 1499, 1577 |