Acetyl-CoA Carboxylase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G36160 AT1G36160 AT1G36180 AT1G36180 AT1G36180 |
| fragaria_vesca | FvH4_5g38000 FvH4_5g38000 FvH4_5g38000 FvH4_5g38000 FvH4_5g38000 FvH4_5g38000 |
| malus_domestica | MD08G1178000.v1.1 MD15G1363500.v1.1 |
| prunus_persica | Prupe.1G512000_v2.0.a1 Prupe.1G512000_v2.0.a1 Prupe.1G512000_v2.0.a1 |
| pyrus_communis | pycom08g15250 pycom15g32670 |
| rosa_chinensis | RchiOBHm_Chr2g0140771 RchiOBHm_Chr2g0144971 RchiOBHm_Chr7g0239931 |
| rosa_laevigata | RLG00000000716 RLG00000013564 RLG00000020589 |
| rosa_multiflora | Rmu_co8457723.1_g000001 Rmu_sc0000540.1_g000024 Rmu_sc0001684.1_g000001 Rmu_sc0006326.1_g000027 Rmu_sc0041871.1_g000001 Rmu_sc0041872.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00220610 |
| rosa_rugosa | Rorug03G0235100 Rorug07G0331300 Rorug07G0331300 |
| rosa_samantha | Rh1CG081500 Rh1DG087900 Rh4AG110300 Rh4DG033300 Rh5BG555900 Rh5CG578700 Rh5DG265800 Rh7AG485000 Rh7BG458000 Rh7DG470600 |
| rosa_wichuraiana | Rw7G040680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1112 |
| AarI | CACCTGC | 2 cut(s) | 2491, 3983 |
| Acc36I | ACCTGC | 2 cut(s) | 2491, 3983 |
| Acc65I | GGTACC | 1 cut(s) | 2394 |
| AccB1I | GGYRCC | 2 cut(s) | 1218, 2394 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 866, 1652 |
| AccI | GTMKAC | 6 cut(s) | 45, 2024, 3225, 3982, 4175, 4218 |
| AccII | CGCG | 1 cut(s) | 2907 |
| AciI | CCGC | 4 cut(s) | 1216, 2806, 3532, 4226 |
| AclWI | GGATC | 9 cut(s) | 142, 877, 1105, 1637, 1650, 2561, 3462, 3829, 3924 |
| AcoI | YGGCCR | 1 cut(s) | 552 |
| AcuI | CTGAAG | 9 cut(s) | 873, 1539, 1856, 2321, 2535, 2556, 3509, 3800, 3881 |
| AcvI | CACGTG | 1 cut(s) | 4566 |
| AdeI | CACNNNGTG | 1 cut(s) | 1422 |
| AflII | CTTAAG | 2 cut(s) | 3305, 3956 |
| AflIII | ACRYGT | 4 cut(s) | 164, 685, 874, 1777 |
| AjnI | CCWGG | 7 cut(s) | 619, 703, 1093, 2170, 2397, 3171, 3626 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 81, 113, 2620, 2652, 4229, 4261 |
| AleI | CACNNNNGTG | 1 cut(s) | 3174 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2751, 2783 |
| Alw21I | GWGCWC | 3 cut(s) | 1410, 1807, 4042 |
| Alw26I | GTCTC | 4 cut(s) | 1259, 1803, 2366, 3795 |
| AlwI | GGATC | 9 cut(s) | 142, 877, 1105, 1637, 1650, 2561, 3462, 3829, 3924 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1156, 1334, 1418 |
| Ama87I | CYCGRG | 3 cut(s) | 1800, 3027, 4185 |
| AoxI | GGCC | 8 cut(s) | 552, 701, 712, 776, 1601, 1976, 2621, 2919 |
| ApaI | GGGCCC | 1 cut(s) | 2625 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1754, 1786, 3598, 3630 |
| AseI | ATTAAT | 4 cut(s) | 27, 827, 3692, 3768 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1552, 3114, 3370, 3810 |
| Asp718I | GGTACC | 1 cut(s) | 2394 |
| AspLEI | GCGC | 2 cut(s) | 2907, 3467 |
| AsuC2I | CCSGG | 4 cut(s) | 914, 2612, 4186, 4187 |
| AsuNHI | GCTAGC | 1 cut(s) | 2666 |
| AvaI | CYCGRG | 3 cut(s) | 1800, 3027, 4185 |
| AvaII | GGWCC | 5 cut(s) | 1039, 1241, 2168, 4189, 4368 |
| BaeGI | GKGCMC | 2 cut(s) | 333, 2625 |
| BalI | TGGCCA | 1 cut(s) | 554 |
| BamHI | GGATCC | 1 cut(s) | 1642 |
| BanI | GGYRCC | 2 cut(s) | 1218, 2394 |
| BanII | GRGCYC | 5 cut(s) | 270, 1807, 2625, 2959, 4042 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 840, 872, 2202, 2234 |
| BbrPI | CACGTG | 1 cut(s) | 4566 |
| Bbv12I | GWGCWC | 3 cut(s) | 1410, 1807, 4042 |
| BbvCI | CCTCAGC | 2 cut(s) | 2390, 2442 |
| BceAI | ACGGC | 2 cut(s) | 1179, 2561 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1274, 1308, 2100, 2134 |
| BciT130I | CCWGG | 7 cut(s) | 621, 705, 1095, 2172, 2399, 3173, 3628 |
| BciVI | GTATCC | 1 cut(s) | 3406 |
| BclI | TGATCA | 3 cut(s) | 1162, 3505, 3514 |
| BcnI | CCSGG | 4 cut(s) | 914, 2612, 4186, 4187 |
| BcoDI | GTCTC | 4 cut(s) | 1259, 1803, 2366, 3795 |
| BfaI | CTAG | 9 cut(s) | 1560, 1808, 2667, 2747, 2798, 2868, 3825, 4307, 4323 |
| BfmI | CTRYAG | 9 cut(s) | 384, 1201, 1251, 1260, 1348, 1909, 1995, 2179, 2676 |
| BfoI | RGCGCY | 1 cut(s) | 3468 |
| BfrI | CTTAAG | 2 cut(s) | 3305, 3956 |
| BfuAI | ACCTGC | 2 cut(s) | 2491, 3983 |
| BfuI | GTATCC | 1 cut(s) | 3406 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3473 |
| BglII | AGATCT | 3 cut(s) | 2818, 3136, 3608 |
| BmcAI | AGTACT | 1 cut(s) | 1370 |
| Bme18I | GGWCC | 5 cut(s) | 1039, 1241, 2168, 4189, 4368 |
| BmeT110I | CYCGRG | 3 cut(s) | 1800, 3027, 4185 |
| BmrI | ACTGGG | 2 cut(s) | 327, 1406 |
| BmtI | GCTAGC | 1 cut(s) | 2670 |
| BmuI | ACTGGG | 2 cut(s) | 327, 1406 |
| BpmI | CTGGAG | 4 cut(s) | 1758, 2511, 3961, 4133 |
| Bpu10I | CCTNAGC | 4 cut(s) | 732, 834, 2390, 2442 |
| BpuEI | CTTGAG | 3 cut(s) | 2087, 2936, 3909 |
| BpuMI | CCSGG | 4 cut(s) | 914, 2612, 4186, 4187 |
| Bsa29I | ATCGAT | 2 cut(s) | 1887, 4480 |
| BsaAI | YACGTR | 3 cut(s) | 2231, 4460, 4566 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3915 |
| BsaJI | CCNNGG | 8 cut(s) | 418, 860, 1982, 2599, 3172, 3393, 3627, 4185 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1240, 1270, 3714, 3744 |
| Bse118I | RCCGGY | 1 cut(s) | 81 |
| Bse1I | ACTGG | 9 cut(s) | 236, 333, 1366, 1412, 1668, 2028, 3225, 3978, 4067 |
| Bse3DI | GCAATG | 7 cut(s) | 555, 999, 2046, 2532, 3357, 4337, 4389 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3915 |
| BseBI | CCWGG | 7 cut(s) | 621, 705, 1095, 2172, 2399, 3173, 3628 |
| BseCI | ATCGAT | 2 cut(s) | 1887, 4480 |
| BseDI | CCNNGG | 8 cut(s) | 418, 860, 1982, 2599, 3172, 3393, 3627, 4185 |
| BseJI | GATNNNNATC | 1 cut(s) | 3915 |
| BseMI | GCAATG | 7 cut(s) | 555, 999, 2046, 2532, 3357, 4337, 4389 |
| BseNI | ACTGG | 9 cut(s) | 236, 333, 1366, 1412, 1668, 2028, 3225, 3978, 4067 |
| BseRI | GAGGAG | 5 cut(s) | 254, 328, 1250, 1869, 4110 |
| BseSI | GKGCMC | 2 cut(s) | 333, 2625 |
| BseYI | CCCAGC | 2 cut(s) | 988, 1444 |
| BsgI | GTGCAG | 4 cut(s) | 34, 2055, 3759, 4011 |
| Bsh1236I | CGCG | 1 cut(s) | 2907 |
| BshFI | GGCC | 8 cut(s) | 554, 703, 714, 778, 1603, 1978, 2623, 2921 |
| BshNI | GGYRCC | 2 cut(s) | 1218, 2394 |
| BshVI | ATCGAT | 2 cut(s) | 1887, 4480 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1410, 1807, 4042 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1800, 3027, 4185 |
| BsiSI | CCGG | 4 cut(s) | 82, 914, 2612, 4186 |
| BslFI | GGGAC | 2 cut(s) | 2020, 4202 |
| BsmAI | GTCTC | 4 cut(s) | 1259, 1803, 2366, 3795 |
| BsmFI | GGGAC | 2 cut(s) | 2020, 4202 |
| BsmI | GAATGC | 2 cut(s) | 1746, 4051 |
| BsnI | GGCC | 8 cut(s) | 554, 703, 714, 778, 1603, 1978, 2623, 2921 |
| BsoBI | CYCGRG | 3 cut(s) | 1800, 3027, 4185 |
| Bsp120I | GGGCCC | 1 cut(s) | 2621 |
| Bsp1286I | GDGCHC | 7 cut(s) | 270, 333, 1410, 1807, 2625, 2959, 4042 |
| Bsp1407I | TGTACA | 2 cut(s) | 4168, 4206 |
| Bsp19I | CCATGG | 2 cut(s) | 860, 2599 |
| BspACI | CCGC | 4 cut(s) | 1216, 2806, 3532, 4226 |
| BspANI | GGCC | 8 cut(s) | 554, 703, 714, 778, 1603, 1978, 2623, 2921 |
| BspDI | ATCGAT | 2 cut(s) | 1887, 4480 |
| BspFNI | CGCG | 1 cut(s) | 2907 |
| BspHI | TCATGA | 2 cut(s) | 1750, 3802 |
| BspMAI | CTGCAG | 2 cut(s) | 1205, 2680 |
| BspMI | ACCTGC | 2 cut(s) | 2491, 3983 |
| BspOI | GCTAGC | 1 cut(s) | 2670 |
| BspPI | GGATC | 9 cut(s) | 142, 877, 1105, 1637, 1650, 2561, 3462, 3829, 3924 |
| BspT107I | GGYRCC | 2 cut(s) | 1218, 2394 |
| BspTI | CTTAAG | 2 cut(s) | 3305, 3956 |
| BsrDI | GCAATG | 7 cut(s) | 555, 999, 2046, 2532, 3357, 4337, 4389 |
| BsrFI | RCCGGY | 1 cut(s) | 81 |
| BsrGI | TGTACA | 2 cut(s) | 4168, 4206 |
| BsrI | ACTGG | 9 cut(s) | 236, 333, 1366, 1412, 1668, 2028, 3225, 3978, 4067 |
| BssAI | RCCGGY | 1 cut(s) | 81 |
| BssECI | CCNNGG | 8 cut(s) | 418, 860, 1982, 2599, 3172, 3393, 3627, 4185 |
| BssNAI | GTATAC | 1 cut(s) | 4176 |
| BssT1I | CCWWGG | 4 cut(s) | 418, 860, 1982, 2599 |
| Bst1107I | GTATAC | 1 cut(s) | 4176 |
| Bst2UI | CCWGG | 7 cut(s) | 621, 705, 1095, 2172, 2399, 3173, 3628 |
| Bst6I | CTCTTC | 5 cut(s) | 861, 2478, 3007, 3048, 4383 |
| BstAFI | CTTAAG | 2 cut(s) | 3305, 3956 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 752, 2734, 4412 |
| BstAUI | TGTACA | 2 cut(s) | 4168, 4206 |
| BstBAI | YACGTR | 3 cut(s) | 2231, 4460, 4566 |
| BstC8I | GCNNGC | 7 cut(s) | 1703, 2333, 2384, 2532, 2668, 3759, 4038 |
| BstDSI | CCRYGG | 2 cut(s) | 860, 2599 |
| BstEII | GGTNACC | 1 cut(s) | 983 |
| BstFNI | CGCG | 1 cut(s) | 2907 |
| BstH2I | RGCGCY | 1 cut(s) | 3468 |
| BstHHI | GCGC | 2 cut(s) | 2907, 3467 |
| BstMAI | GTCTC | 4 cut(s) | 1259, 1803, 2366, 3795 |
| BstNI | CCWGG | 7 cut(s) | 621, 705, 1095, 2172, 2399, 3173, 3628 |
| BstNSI | RCATGY | 7 cut(s) | 168, 301, 571, 689, 878, 1781, 1901 |
| BstPI | GGTNACC | 1 cut(s) | 983 |
| BstSFI | CTRYAG | 9 cut(s) | 384, 1201, 1251, 1260, 1348, 1909, 1995, 2179, 2676 |
| BstSLI | GKGCMC | 2 cut(s) | 333, 2625 |
| BstUI | CGCG | 1 cut(s) | 2907 |
| BstX2I | RGATCY | 8 cut(s) | 147, 1097, 1642, 2818, 3136, 3454, 3608, 3821 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1713 |
| BstYI | RGATCY | 8 cut(s) | 147, 1097, 1642, 2818, 3136, 3454, 3608, 3821 |
| BstZ17I | GTATAC | 1 cut(s) | 4176 |
| Bsu15I | ATCGAT | 2 cut(s) | 1887, 4480 |
| BsuI | GTATCC | 1 cut(s) | 3406 |
| BsuRI | GGCC | 8 cut(s) | 554, 703, 714, 778, 1603, 1978, 2623, 2921 |
| BsuTUI | ATCGAT | 2 cut(s) | 1887, 4480 |
| BtgI | CCRYGG | 2 cut(s) | 860, 2599 |
| BtsI | GCAGTG | 2 cut(s) | 1210, 3605 |
| BveI | ACCTGC | 2 cut(s) | 2491, 3983 |
| Cac8I | GCNNGC | 7 cut(s) | 1703, 2333, 2384, 2532, 2668, 3759, 4038 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1156, 1334, 1418 |
| CciI | TCATGA | 2 cut(s) | 1750, 3802 |
| CfoI | GCGC | 2 cut(s) | 2907, 3467 |
| Cfr10I | RCCGGY | 1 cut(s) | 81 |
| Cfr9I | CCCGGG | 1 cut(s) | 4185 |
| ClaI | ATCGAT | 2 cut(s) | 1887, 4480 |
| CseI | GACGC | 3 cut(s) | 2010, 3542, 4094 |
| CsiI | ACCWGGT | 1 cut(s) | 2397 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1916, 1951 |
| DraI | TTTAAA | 3 cut(s) | 1696, 2017, 3579 |
| DraIII | CACNNNGTG | 1 cut(s) | 1422 |
| EaeI | YGGCCR | 1 cut(s) | 552 |
| Eam1104I | CTCTTC | 5 cut(s) | 861, 2478, 3007, 3048, 4383 |
| EarI | CTCTTC | 5 cut(s) | 861, 2478, 3007, 3048, 4383 |
| Ecl136II | GAGCTC | 2 cut(s) | 1805, 4040 |
| Eco130I | CCWWGG | 4 cut(s) | 418, 860, 1982, 2599 |
| Eco147I | AGGCCT | 1 cut(s) | 1978 |
| Eco24I | GRGCYC | 5 cut(s) | 270, 1807, 2625, 2959, 4042 |
| Eco47I | GGWCC | 5 cut(s) | 1039, 1241, 2168, 4189, 4368 |
| Eco53kI | GAGCTC | 2 cut(s) | 1805, 4040 |
| Eco57I | CTGAAG | 9 cut(s) | 873, 1539, 1856, 2321, 2535, 2556, 3509, 3800, 3881 |
| Eco72I | CACGTG | 1 cut(s) | 4566 |
| Eco88I | CYCGRG | 3 cut(s) | 1800, 3027, 4185 |
| Eco91I | GGTNACC | 1 cut(s) | 983 |
| EcoICRI | GAGCTC | 2 cut(s) | 1805, 4040 |
| EcoO109I | RGGNCCY | 4 cut(s) | 2168, 2621, 2622, 4368 |
| EcoO65I | GGTNACC | 1 cut(s) | 983 |
| EcoRI | GAATTC | 2 cut(s) | 404, 1754 |
| EcoRII | CCWGG | 7 cut(s) | 619, 703, 1093, 2170, 2397, 3171, 3626 |
| EcoT14I | CCWWGG | 4 cut(s) | 418, 860, 1982, 2599 |
| EcoT22I | ATGCAT | 2 cut(s) | 748, 3858 |
| EcoT38I | GRGCYC | 5 cut(s) | 270, 1807, 2625, 2959, 4042 |
| ErhI | CCWWGG | 4 cut(s) | 418, 860, 1982, 2599 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1966, 1998, 2952, 2984, 3474, 3506 |
| FaqI | GGGAC | 2 cut(s) | 2020, 4202 |
| FauI | CCCGC | 2 cut(s) | 2813, 3525 |
| FauNDI | CATATG | 2 cut(s) | 2437, 4440 |
| FbaI | TGATCA | 3 cut(s) | 1162, 3505, 3514 |
| FblI | GTMKAC | 6 cut(s) | 45, 2024, 3225, 3982, 4175, 4218 |
| FriOI | GRGCYC | 5 cut(s) | 270, 1807, 2625, 2959, 4042 |
| FspBI | CTAG | 9 cut(s) | 1560, 1808, 2667, 2747, 2798, 2868, 3825, 4307, 4323 |
| GlaI | GCGC | 2 cut(s) | 2906, 3466 |
| GsaI | CCCAGC | 2 cut(s) | 992, 1448 |
| GsuI | CTGGAG | 4 cut(s) | 1758, 2511, 3961, 4133 |
| HaeII | RGCGCY | 1 cut(s) | 3468 |
| HaeIII | GGCC | 8 cut(s) | 554, 703, 714, 778, 1603, 1978, 2623, 2921 |
| HapII | CCGG | 4 cut(s) | 82, 914, 2612, 4186 |
| HgaI | GACGC | 3 cut(s) | 2010, 3542, 4094 |
| HhaI | GCGC | 2 cut(s) | 2907, 3467 |
| Hin6I | GCGC | 2 cut(s) | 2905, 3465 |
| HinP1I | GCGC | 2 cut(s) | 2905, 3465 |
| HincII | GTYRAC | 2 cut(s) | 46, 3317 |
| HindII | GTYRAC | 2 cut(s) | 46, 3317 |
| HindIII | AAGCTT | 1 cut(s) | 4148 |
| HpaII | CCGG | 4 cut(s) | 82, 914, 2612, 4186 |
| Hpy99I | CGWCG | 1 cut(s) | 3558 |
| HpyCH4IV | ACGT | 5 cut(s) | 846, 1320, 2230, 4459, 4565 |
| HpySE526I | ACGT | 5 cut(s) | 846, 1320, 2230, 4459, 4565 |
| HspAI | GCGC | 2 cut(s) | 2905, 3465 |
| KpnI | GGTACC | 1 cut(s) | 2398 |
| Ksp22I | TGATCA | 3 cut(s) | 1162, 3505, 3514 |
| MabI | ACCWGGT | 1 cut(s) | 2397 |
| MaeI | CTAG | 9 cut(s) | 1560, 1808, 2667, 2747, 2798, 2868, 3825, 4307, 4323 |
| MaeII | ACGT | 5 cut(s) | 846, 1320, 2230, 4459, 4565 |
| MaeIII | GTNAC | 9 cut(s) | 322, 904, 983, 1152, 1196, 1414, 1630, 2267, 3083 |
| MflI | RGATCY | 8 cut(s) | 147, 1097, 1642, 2818, 3136, 3454, 3608, 3821 |
| MhlI | GDGCHC | 7 cut(s) | 270, 333, 1410, 1807, 2625, 2959, 4042 |
| MlsI | TGGCCA | 1 cut(s) | 554 |
| MluNI | TGGCCA | 1 cut(s) | 554 |
| MlyI | GAGTC | 4 cut(s) | 1757, 1805, 2002, 3732 |
| MmeI | TCCRAC | 6 cut(s) | 1260, 1303, 1920, 1981, 2235, 4374 |
| Mox20I | TGGCCA | 1 cut(s) | 554 |
| Mph1103I | ATGCAT | 2 cut(s) | 748, 3858 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1552, 3114, 3370, 3810 |
| MscI | TGGCCA | 1 cut(s) | 554 |
| MslI | CAYNNNNRTG | 7 cut(s) | 690, 1047, 1173, 1194, 1527, 2421, 3174 |
| Msp20I | TGGCCA | 1 cut(s) | 554 |
| MspA1I | CMGCKG | 2 cut(s) | 473, 2297 |
| MspCI | CTTAAG | 2 cut(s) | 3305, 3956 |
| MspI | CCGG | 4 cut(s) | 82, 914, 2612, 4186 |
| Mva1269I | GAATGC | 2 cut(s) | 1746, 4051 |
| MvaI | CCWGG | 7 cut(s) | 621, 705, 1095, 2172, 2399, 3173, 3628 |
| MvnI | CGCG | 1 cut(s) | 2907 |
| NciI | CCSGG | 4 cut(s) | 914, 2612, 4186, 4187 |
| NcoI | CCATGG | 2 cut(s) | 860, 2599 |
| NdeI | CATATG | 2 cut(s) | 2437, 4440 |
| NheI | GCTAGC | 1 cut(s) | 2666 |
| NmuCI | GTSAC | 5 cut(s) | 322, 1196, 1414, 2267, 3083 |
| NsiI | ATGCAT | 2 cut(s) | 748, 3858 |
| NspI | RCATGY | 7 cut(s) | 168, 301, 571, 689, 878, 1781, 1901 |
| OliI | CACNNNNGTG | 1 cut(s) | 3174 |
| PaeR7I | CTCGAG | 1 cut(s) | 1800 |
| PagI | TCATGA | 2 cut(s) | 1750, 3802 |
| PaqCI | CACCTGC | 2 cut(s) | 2491, 3983 |
| PceI | AGGCCT | 1 cut(s) | 1978 |
| PciI | ACATGT | 4 cut(s) | 164, 685, 874, 1777 |
| PctI | GAATGC | 2 cut(s) | 1746, 4051 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1552, 3114, 3370, 3810 |
| PfeI | GAWTC | 8 cut(s) | 573, 727, 1592, 1950, 2198, 2689, 2837, 3806 |
| PflFI | GACNNNGTC | 1 cut(s) | 502 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 866, 1652 |
| PfoI | TCCNGGA | 3 cut(s) | 912, 1093, 2170 |
| PleI | GAGTC | 4 cut(s) | 1757, 1804, 2002, 3731 |
| PmaCI | CACGTG | 1 cut(s) | 4566 |
| PmlI | CACGTG | 1 cut(s) | 4566 |
| PpsI | GAGTC | 4 cut(s) | 1757, 1804, 2002, 3731 |
| Ppu21I | YACGTR | 3 cut(s) | 2231, 4460, 4566 |
| PpuMI | RGGWCCY | 2 cut(s) | 2168, 4368 |
| PscI | ACATGT | 4 cut(s) | 164, 685, 874, 1777 |
| PshBI | ATTAAT | 4 cut(s) | 27, 827, 3692, 3768 |
| PsiI | TTATAA | 1 cut(s) | 1112 |
| Psp124BI | GAGCTC | 2 cut(s) | 1807, 4042 |
| Psp5II | RGGWCCY | 2 cut(s) | 2168, 4368 |
| Psp6I | CCWGG | 7 cut(s) | 619, 703, 1093, 2170, 2397, 3171, 3626 |
| PspCI | CACGTG | 1 cut(s) | 4566 |
| PspEI | GGTNACC | 1 cut(s) | 983 |
| PspFI | CCCAGC | 2 cut(s) | 988, 1444 |
| PspGI | CCWGG | 7 cut(s) | 619, 703, 1093, 2170, 2397, 3171, 3626 |
| PspOMI | GGGCCC | 1 cut(s) | 2621 |
| PspPPI | RGGWCCY | 2 cut(s) | 2168, 4368 |
| PstI | CTGCAG | 2 cut(s) | 1205, 2680 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1156, 1334, 1418 |
| PsuI | RGATCY | 8 cut(s) | 147, 1097, 1642, 2818, 3136, 3454, 3608, 3821 |
| PsyI | GACNNNGTC | 1 cut(s) | 502 |
| PvuII | CAGCTG | 2 cut(s) | 473, 2297 |
| RseI | CAYNNNNRTG | 7 cut(s) | 690, 1047, 1173, 1194, 1527, 2421, 3174 |
| SacI | GAGCTC | 2 cut(s) | 1807, 4042 |
| SalI | GTCGAC | 1 cut(s) | 44 |
| ScaI | AGTACT | 1 cut(s) | 1370 |
| SchI | GAGTC | 4 cut(s) | 1757, 1805, 2002, 3732 |
| SduI | GDGCHC | 7 cut(s) | 270, 333, 1410, 1807, 2625, 2959, 4042 |
| SexAI | ACCWGGT | 1 cut(s) | 2397 |
| SfcI | CTRYAG | 9 cut(s) | 384, 1201, 1251, 1260, 1348, 1909, 1995, 2179, 2676 |
| Sfr274I | CTCGAG | 1 cut(s) | 1800 |
| SinI | GGWCC | 5 cut(s) | 1039, 1241, 2168, 4189, 4368 |
| SlaI | CTCGAG | 1 cut(s) | 1800 |
| SmaI | CCCGGG | 1 cut(s) | 4187 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 690, 1047, 1173, 1194, 1527, 2421, 3174 |
| SmlI | CTYRAG | 6 cut(s) | 1800, 2066, 2915, 3305, 3924, 3956 |
| SmoI | CTYRAG | 6 cut(s) | 1800, 2066, 2915, 3305, 3924, 3956 |
| SseBI | AGGCCT | 1 cut(s) | 1978 |
| SsiI | CCGC | 4 cut(s) | 1216, 2806, 3532, 4226 |
| SspMI | CTAG | 9 cut(s) | 1560, 1808, 2667, 2747, 2798, 2868, 3825, 4307, 4323 |
| SstI | GAGCTC | 2 cut(s) | 1807, 4042 |
| StuI | AGGCCT | 1 cut(s) | 1978 |
| StyI | CCWWGG | 4 cut(s) | 418, 860, 1982, 2599 |
| TaiI | ACGT | 5 cut(s) | 849, 1323, 2233, 4462, 4568 |
| TaqI | TCGA | 9 cut(s) | 45, 1294, 1393, 1575, 1801, 1852, 1887, 3118, 4480 |
| TatI | WGTACW | 5 cut(s) | 367, 1368, 1678, 4168, 4206 |
| TauI | GCSGC | 2 cut(s) | 1219, 4228 |
| TfiI | GAWTC | 8 cut(s) | 573, 727, 1592, 1950, 2198, 2689, 2837, 3806 |
| TseFI | GTSAC | 5 cut(s) | 322, 1196, 1414, 2267, 3083 |
| Tsp45I | GTSAC | 5 cut(s) | 322, 1196, 1414, 2267, 3083 |
| TspGWI | ACGGA | 3 cut(s) | 125, 477, 2274 |
| TspMI | CCCGGG | 1 cut(s) | 4185 |
| Tth111I | GACNNNGTC | 1 cut(s) | 502 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 866, 1652 |
| Vha464I | CTTAAG | 2 cut(s) | 3305, 3956 |
| VpaK11BI | GGWCC | 5 cut(s) | 1039, 1241, 2168, 4189, 4368 |
| VspI | ATTAAT | 4 cut(s) | 27, 827, 3692, 3768 |
| XceI | RCATGY | 7 cut(s) | 168, 301, 571, 689, 878, 1781, 1901 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 347, 1419, 1460 |
| XhoI | CTCGAG | 1 cut(s) | 1800 |
| XmaI | CCCGGG | 1 cut(s) | 4185 |
| XmiI | GTMKAC | 6 cut(s) | 45, 2024, 3225, 3982, 4175, 4218 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1552, 3114, 3370, 3810 |
| XspI | CTAG | 9 cut(s) | 1560, 1808, 2667, 2747, 2798, 2868, 3825, 4307, 4323 |
| ZrmI | AGTACT | 1 cut(s) | 1370 |
| Zsp2I | ATGCAT | 2 cut(s) | 748, 3858 |