pycom10g12380

BRIGHT, ARID (A/T-rich interaction domain) domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0001717
Physical Location & Seq
Reverse (-)
15898360 .. 15903062
4703 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2505 bp
ATGGCGGGTGTAGAGAAAGAGGTGGGGAAAATTGTGGAGGATGAGGAATTCAAAGGGGTGGCAGATACCCATGTTCGTGAACAGCTTGAAGGGGGAGAAGAACCAAACACCAATACATTAGATGGTGTAGAAATGGAGACCCAGAAGAGCCTTGACGAAAATGGAGTTGAATTGCCTGGTGAGGAAATCCGGGGTGCAGTTGATCCGGTTTCCGCTGTCCCCGAAATTCCTGAAGATGCTAATGTTGCCGACGAGATGTCCATTGAGCCGGGTTCTGGTACTGAAACTGATAAGGTTGTGAGTTATGTGGATTCTGGTGTGCATGGTGAGAGTGAGGTTTTTGTGAAGATTGCAAGTGAGGAGAGTGGTGGTGAGAAAGGGAAGGCGCTGAAGGATGATTTAGGCAGCAAAGTTGACCCGTCTATTGAATTGGGTGCCCGTGCCGAGGCTGATAGTCTTGTCGGTGATGGTGGATCCCATCACACCATGGACCCCATGGAGTTTGAAAAGGAAGATGATGGTGTTGGAGAAGAAAAGGCACTGAAGGATGGGGTGAGCGGCGAGGCCAACCCTTCCAATGAACCAGATATTGGTGCTAAAACTGATGATGTTGCTTGTGAGATGGAGCTTGATATGCCTCATAATGGTGAGGTTGCAGTGGAGAAATTGACAGATGGGGCGAGCAGTGAGGCCAACCCCTCCAGTGAAATCTATATCGGCGATGAAACTGATAATATTGTTTCTAAGGTGGAGCCTTTTATGCCTCGTGATAGTGAGGTTGCAACAGAGAAACCAGCAGACGGGGAGAGCAACGAGGCCAAATCCTCCAATGAGCCAGATAGCAGTGCTTGTAAGGTGGAGCCTGGTATGCCTCATGATAGTGAGCTTGCAATGGAAATACTAATAGATCGGGCGAACAACAAGGCGAAATCCTCCAATGAACTAGACAGCAGTGTTGAATATGAAAATGTTGTTGGAATGGTGGAGCTCGATATGTCTCATGATAATGGGGCTACAACGGAGAAACTGATCGATGGGATGAGCATTGAAGCCAAACCCTTTGGTGAACCAAATATCAGTGCTGAAGCTGATAATGCAGCTCGTAAGGTGGAGCGTGATATGCCTTGTGATGGTGAGCTTGCAACCGAAAAACTGACAAATAAGGTGAGCAGCAAGGCCAACCCCTCCAGTGAACTGCACATCAGTGCTGAAGCTGATAATTCTGTTTGTAAGATGGAAACTGATACAATGCCTCATGATAGTGGGGTTGCTATGCAGACACTGATAGGTGGGTTGAACATCAAGGCCAGCCCCTCCAATGAACCCCATATCAGTGCTGAAACTGATAATGTTGTTAGTAAGGTGGAGCCTGATAGGCATCGTGATAATGAAGTCGAAATGGAGACTGAATCTGATGATGATGGTGAGAAACTAGAGGTACTGAATGGTGGGGTGAGCAACAAAACAAAGTTTTCTTTTCACACCGACATAAACGAGCAACTGCAGAAACCCAAGTTTTATGTTGGACGTAAGGTTGGGATGAAGAGCTTAGAACCAAAGAAAACCTTCCTCTTGGATCCAGGTGCTGATGAGGGTGGTGAGTCGGGGACTGAGGAGGAGCAAACATCATTCATGAAGGAGGTTGAGAGTTTATATAAAGAGAAGAATTTAGAATTCAAAGCCCCAAAGTTCTACAAAGAGGAATTAAATTTGCTCAAGTTATGGAGAGCTGTGATCAAACTTGGTGGCTATGACAAGGTTACTACATGCAAGTTGTGGCGGCAGGTTGGAGAATCATTCAATCCCCCAAAAACGTGTACTACTGTTTCTTGGACTTTCCGAAATTTTTATGAGAAGGCATTACTTGAATTTGAAAGGGATAGACTTCATGGTGGTGAACTTCCTCTTCCTGCAGAGCCAACTAGAGTTGAGAATCGGGCTGATGGTGGCCATACTTTAGGATCAGGTAGGGCACTAAGGGATGCTGCAGCTCGTGCCATGCAGGGTTGGCACTCTCACCGCCATCATGGTAATAATGGTGAGGTTGGAGATACAACTAATAAGGATAAGCACTTGAGTACCATGCCAAAAAGTGACAAGCAACTTAAAAGTTCTGGTTTACTAAAGCGGAAAAAGCCATCTTATATGGATTCTGCCGTCCCGGTTGCTGACATGAAAGCTATAAAACCACGGGATACAATGGTATTTGATATTGGACCTCCAGCAGATTGGGTGAAGATTAATGTGAAAAGATTTAATGACTGCTTTGAGGTATATGCCTTAGTTCCTGGGCTACTGCGCGAGGAGGTGCATGTTCAATCTGACCCAGCCGGACGCTTGATTATATCCGGCCAACCAGCACAACTGGATAATCCTTGGGGTGTTGCACCCTTTAAGAAGGTTGTCAGCCTACCTTCGAGAATCGATCCACATCAGACATCTGCGGTAGTGACCTTGAATGGCCAGTTGTTTGTGCGCGTTCCATTTGAACAGTCAGATTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ARID HSP20

Protein Analysis

835

Amino Acids

90.91

Weight (kDa)

4.65

Isoelectric Point (pI)

41.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARID PF01388 541 - 625 4.2e-19 ARID/BRIGHT DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1774
AccB1I GGYRCC 1 cut(s) 434
AccB7I CCANNNNNTGG 1 cut(s) 590
AccBSI CCGCTC 1 cut(s) 558
AccII CGCG 2 cut(s) 2301, 2478
AciI CCGC 7 cut(s) 5, 213, 558, 1780, 2020, 2128, 2444
AclWI GGATC 7 cut(s) 197, 468, 481, 1571, 1584, 1969, 2420
AcoI YGGCCR 3 cut(s) 1948, 2350, 2461
AcsI RAATTY 7 cut(s) 47, 225, 1666, 1673, 1708, 1843, 1868
AcuI CTGAAG 5 cut(s) 252, 410, 563, 1104, 1230
AfaI GTAC 4 cut(s) 280, 1440, 1819, 2080
AfiI CCNNNNNNNGG 6 cut(s) 275, 445, 590, 644, 800, 1130
AflIII ACRYGT 1 cut(s) 1814
AhdI GACNNNNNGTC 1 cut(s) 256
AjnI CCWGG 4 cut(s) 175, 862, 1579, 2287
AjuI GAANNNNNNNTTGG 4 cut(s) 573, 605, 957, 989
AleI CACNNNNGTG 1 cut(s) 1203
Alw21I GWGCWC 1 cut(s) 990
Alw26I GTCTC 3 cut(s) 131, 1002, 1397
AlwI GGATC 7 cut(s) 197, 468, 481, 1571, 1584, 1969, 2420
AlwNI CAGNNNCTG 2 cut(s) 1282, 1586
AoxI GGCC 8 cut(s) 564, 690, 816, 1176, 1305, 1948, 2350, 2461
ApeKI GCWGC 5 cut(s) 405, 1097, 1170, 1985, 1988
ApoI RAATTY 7 cut(s) 47, 225, 1666, 1673, 1708, 1843, 1868
AseI ATTAAT 1 cut(s) 2241
Asp700I GAANNNNTTC 1 cut(s) 1565
AspLEI GCGC 3 cut(s) 388, 2301, 2478
AspS9I GGNCC 2 cut(s) 490, 2216
AsuC2I CCSGG 3 cut(s) 191, 270, 2162
AvaII GGWCC 2 cut(s) 490, 2216
BaeGI GKGCMC 2 cut(s) 439, 1975
BaeI ACNNNNGTAYC 6 cut(s) 57, 90, 2062, 2095, 2187, 2220
BalI TGGCCA 2 cut(s) 1950, 2463
BamHI GGATCC 2 cut(s) 473, 1576
BanI GGYRCC 1 cut(s) 434
BanII GRGCYC 1 cut(s) 990
BauI CACGAG 2 cut(s) 765, 1992
Bbv12I GWGCWC 1 cut(s) 990
BbvI GCAGC 5 cut(s) 417, 1109, 1182, 1972, 2000
BceAI ACGGC 1 cut(s) 2141
BciT130I CCWGG 4 cut(s) 177, 864, 1581, 2289
BciVI GTATCC 1 cut(s) 2188
BclI TGATCA 1 cut(s) 1734
BcnI CCSGG 3 cut(s) 191, 270, 2162
BcoDI GTCTC 3 cut(s) 131, 1002, 1397
BfaI CTAG 3 cut(s) 944, 1433, 1923
BfmI CTRYAG 3 cut(s) 1502, 1911, 1986
BfoI RGCGCY 1 cut(s) 389
BfuAI ACCTGC 1 cut(s) 1774
BfuI GTATCC 1 cut(s) 2188
BglI GCCNNNNNGGC 1 cut(s) 1375
BisI GCNGC 7 cut(s) 406, 559, 1098, 1171, 1781, 1986, 1989
BlsI GCNGC 7 cut(s) 407, 560, 1099, 1172, 1782, 1987, 1990
Bme1390I CCNGG 7 cut(s) 177, 191, 270, 864, 1581, 2162, 2289
Bme18I GGWCC 2 cut(s) 490, 2216
BmeRI GACNNNNNGTC 1 cut(s) 256
BmgT120I GGNCC 2 cut(s) 490, 2216
BmiI GGNNCC 7 cut(s) 436, 475, 492, 753, 861, 1368, 1578
BmrFI CCNGG 7 cut(s) 177, 191, 270, 864, 1581, 2162, 2289
BmsI GCATC 3 cut(s) 226, 1387, 1972
BpmI CTGGAG 3 cut(s) 685, 1171, 2205
BpuEI CTTGAG 2 cut(s) 1700, 2095
BpuMI CCSGG 3 cut(s) 191, 270, 2162
Bsa29I ATCGAT 2 cut(s) 1032, 2424
BsaBI GATNNNNATC 2 cut(s) 1377, 2430
BsaI GGTCTC 1 cut(s) 131
BsaJI CCNNGG 7 cut(s) 190, 444, 486, 495, 2189, 2288, 2375
BsaWI WCCGGW 1 cut(s) 205
Bsc4I CCNNNNNNNGG 6 cut(s) 275, 445, 590, 644, 800, 1130
Bse1I ACTGG 4 cut(s) 702, 1188, 2370, 2464
Bse3DI GCAATG 1 cut(s) 897
Bse8I GATNNNNATC 2 cut(s) 1377, 2430
BseBI CCWGG 4 cut(s) 177, 864, 1581, 2289
BseCI ATCGAT 2 cut(s) 1032, 2424
BseDI CCNNGG 7 cut(s) 190, 444, 486, 495, 2189, 2288, 2375
BseGI GGATG 6 cut(s) 46, 400, 553, 1044, 1545, 1987
BseJI GATNNNNATC 2 cut(s) 1377, 2430
BseLI CCNNNNNNNGG 6 cut(s) 275, 445, 590, 644, 800, 1130
BseMI GCAATG 1 cut(s) 897
BseMII CTCAG 1 cut(s) 1602
BseNI ACTGG 4 cut(s) 702, 1188, 2370, 2464
BseRI GAGGAG 4 cut(s) 374, 1628, 1631, 2318
BseSI GKGCMC 2 cut(s) 439, 1975
BseXI GCAGC 5 cut(s) 417, 1109, 1182, 1972, 2000
BseYI CCCAGC 1 cut(s) 2326
BsgI GTGCAG 2 cut(s) 216, 1181
Bsh1236I CGCG 2 cut(s) 2301, 2478
BshFI GGCC 8 cut(s) 566, 692, 818, 1178, 1307, 1950, 2352, 2463
BshNI GGYRCC 1 cut(s) 434
BshVI ATCGAT 2 cut(s) 1032, 2424
BsiHKAI GWGCWC 1 cut(s) 990
BsiSI CCGG 6 cut(s) 190, 206, 269, 2162, 2331, 2349
BslFI GGGAC 3 cut(s) 203, 1621, 2144
BslI CCNNNNNNNGG 6 cut(s) 275, 445, 590, 644, 800, 1130
BsmAI GTCTC 3 cut(s) 131, 1002, 1397
BsmFI GGGAC 3 cut(s) 203, 1621, 2144
BsnI GGCC 8 cut(s) 566, 692, 818, 1178, 1307, 1950, 2352, 2463
Bso31I GGTCTC 1 cut(s) 131
Bsp1286I GDGCHC 3 cut(s) 439, 990, 1975
Bsp143I GATC 8 cut(s) 202, 473, 907, 1029, 1576, 1734, 1961, 2425
Bsp19I CCATGG 2 cut(s) 486, 495
BspACI CCGC 7 cut(s) 5, 213, 558, 1780, 2020, 2128, 2444
BspANI GGCC 8 cut(s) 566, 692, 818, 1178, 1307, 1950, 2352, 2463
BspCNI CTCAG 1 cut(s) 1603
BspDI ATCGAT 2 cut(s) 1032, 2424
BspFNI CGCG 2 cut(s) 2301, 2478
BspHI TCATGA 4 cut(s) 874, 1000, 1255, 1632
BspLI GGNNCC 7 cut(s) 436, 475, 492, 753, 861, 1368, 1578
BspMAI CTGCAG 3 cut(s) 1506, 1915, 1990
BspMI ACCTGC 1 cut(s) 1774
BspPI GGATC 7 cut(s) 197, 468, 481, 1571, 1584, 1969, 2420
BspQI GCTCTTC 2 cut(s) 140, 1538
BspT107I GGYRCC 1 cut(s) 434
BspTNI GGTCTC 1 cut(s) 131
BsrBI CCGCTC 1 cut(s) 558
BsrDI GCAATG 1 cut(s) 897
BsrI ACTGG 4 cut(s) 702, 1188, 2370, 2464
BssECI CCNNGG 7 cut(s) 190, 444, 486, 495, 2189, 2288, 2375
BssMI GATC 8 cut(s) 202, 473, 907, 1029, 1576, 1734, 1961, 2425
BssSI CACGAG 2 cut(s) 765, 1992
BssT1I CCWWGG 3 cut(s) 486, 495, 2375
Bst2BI CACGAG 2 cut(s) 765, 1992
Bst2UI CCWGG 4 cut(s) 177, 864, 1581, 2289
Bst4CI ACNGT 2 cut(s) 1825, 2493
Bst6I CTCTTC 3 cut(s) 140, 1538, 1911
BstAPI GCANNNNNTGC 1 cut(s) 1994
BstC8I GCNNGC 4 cut(s) 682, 888, 1140, 1309
BstDEI CTNAG 5 cut(s) 744, 1549, 1611, 1976, 2281
BstDSI CCRYGG 3 cut(s) 486, 495, 2189
BstF5I GGATG 6 cut(s) 46, 400, 553, 1044, 1545, 1987
BstFNI CGCG 2 cut(s) 2301, 2478
BstH2I RGCGCY 1 cut(s) 389
BstHHI GCGC 3 cut(s) 388, 2301, 2478
BstKTI GATC 8 cut(s) 205, 476, 910, 1032, 1579, 1737, 1964, 2428
BstMAI GTCTC 3 cut(s) 131, 1002, 1397
BstMBI GATC 8 cut(s) 202, 473, 907, 1029, 1576, 1734, 1961, 2425
BstNI CCWGG 4 cut(s) 177, 864, 1581, 2289
BstNSI RCATGY 2 cut(s) 1770, 2315
BstSCI CCNGG 7 cut(s) 175, 189, 268, 862, 1579, 2160, 2287
BstSFI CTRYAG 3 cut(s) 1502, 1911, 1986
BstSLI GKGCMC 2 cut(s) 439, 1975
BstUI CGCG 2 cut(s) 2301, 2478
BstV1I GCAGC 5 cut(s) 417, 1109, 1182, 1972, 2000
BstX2I RGATCY 2 cut(s) 473, 1576
BstXI CCANNNNNNTGG 1 cut(s) 2229
BstYI RGATCY 2 cut(s) 473, 1576
Bsu15I ATCGAT 2 cut(s) 1032, 2424
BsuI GTATCC 1 cut(s) 2188
BsuRI GGCC 8 cut(s) 566, 692, 818, 1178, 1307, 1950, 2352, 2463
BsuTUI ATCGAT 2 cut(s) 1032, 2424
BtgI CCRYGG 3 cut(s) 486, 495, 2189
BtgZI GCGATG 1 cut(s) 735
BtsCI GGATG 6 cut(s) 46, 400, 553, 1044, 1545, 1987
BtsI GCAGTG 4 cut(s) 663, 691, 850, 958
BveI ACCTGC 1 cut(s) 1774
Cac8I GCNNGC 4 cut(s) 682, 888, 1140, 1309
CaiI CAGNNNCTG 2 cut(s) 1282, 1586
CciI TCATGA 4 cut(s) 874, 1000, 1255, 1632
CfoI GCGC 3 cut(s) 388, 2301, 2478
Cfr13I GGNCC 2 cut(s) 490, 2216
ClaI ATCGAT 2 cut(s) 1032, 2424
CseI GACGC 1 cut(s) 2343
Csp6I GTAC 4 cut(s) 279, 1439, 1818, 2079
CspCI CAANNNNNGTGG 2 cut(s) 1726, 1761
CviQI GTAC 4 cut(s) 279, 1439, 1818, 2079
DdeI CTNAG 5 cut(s) 744, 1549, 1611, 1976, 2281
DpnI GATC 8 cut(s) 204, 475, 909, 1031, 1578, 1736, 1963, 2427
DpnII GATC 8 cut(s) 202, 473, 907, 1029, 1576, 1734, 1961, 2425
DriI GACNNNNNGTC 1 cut(s) 256
EaeI YGGCCR 3 cut(s) 1948, 2350, 2461
Eam1104I CTCTTC 3 cut(s) 140, 1538, 1911
Eam1105I GACNNNNNGTC 1 cut(s) 256
EarI CTCTTC 3 cut(s) 140, 1538, 1911
Ecl136II GAGCTC 1 cut(s) 988
Eco130I CCWWGG 3 cut(s) 486, 495, 2375
Eco24I GRGCYC 1 cut(s) 990
Eco31I GGTCTC 1 cut(s) 131
Eco47I GGWCC 2 cut(s) 490, 2216
Eco53kI GAGCTC 1 cut(s) 988
Eco57I CTGAAG 5 cut(s) 252, 410, 563, 1104, 1230
EcoICRI GAGCTC 1 cut(s) 988
EcoRI GAATTC 2 cut(s) 47, 1673
EcoRII CCWGG 4 cut(s) 175, 862, 1579, 2287
EcoT14I CCWWGG 3 cut(s) 486, 495, 2375
EcoT38I GRGCYC 1 cut(s) 990
ErhI CCWWGG 3 cut(s) 486, 495, 2375
FalI AAGNNNNNCTT 2 cut(s) 1550, 1582
FaqI GGGAC 3 cut(s) 203, 1621, 2144
FbaI TGATCA 1 cut(s) 1734
Fnu4HI GCNGC 7 cut(s) 406, 559, 1098, 1171, 1781, 1986, 1989
FokI GGATG 6 cut(s) 53, 407, 560, 1051, 1552, 1994
FriOI GRGCYC 1 cut(s) 990
Fsp4HI GCNGC 7 cut(s) 406, 559, 1098, 1171, 1781, 1986, 1989
FspBI CTAG 3 cut(s) 944, 1433, 1923
GlaI GCGC 3 cut(s) 387, 2300, 2477
GluI GCNGC 7 cut(s) 406, 559, 1098, 1171, 1781, 1986, 1989
GsaI CCCAGC 1 cut(s) 2330
GsuI CTGGAG 3 cut(s) 685, 1171, 2205
HaeII RGCGCY 1 cut(s) 389
HaeIII GGCC 8 cut(s) 566, 692, 818, 1178, 1307, 1950, 2352, 2463
HapII CCGG 6 cut(s) 190, 206, 269, 2162, 2331, 2349
HgaI GACGC 1 cut(s) 2343
HhaI GCGC 3 cut(s) 388, 2301, 2478
Hin6I GCGC 3 cut(s) 386, 2299, 2476
HinP1I GCGC 3 cut(s) 386, 2299, 2476
HincII GTYRAC 1 cut(s) 415
HindII GTYRAC 1 cut(s) 415
HinfI GANTC 7 cut(s) 311, 1409, 1601, 1793, 1933, 2150, 2421
HpaII CCGG 6 cut(s) 190, 206, 269, 2162, 2331, 2349
Hpy166II GTNNAC 7 cut(s) 80, 415, 1067, 1193, 1818, 1898, 2120
Hpy188I TCNGA 5 cut(s) 1414, 1841, 2323, 2436, 2497
Hpy188III TCNNGA 9 cut(s) 77, 230, 767, 875, 1001, 1256, 1382, 1633, 2418
Hpy8I GTNNAC 7 cut(s) 80, 415, 1067, 1193, 1818, 1898, 2120
Hpy99I CGWCG 1 cut(s) 254
HpyCH4III ACNGT 2 cut(s) 1825, 2493
HpyCH4IV ACGT 2 cut(s) 1528, 1814
HpyF3I CTNAG 5 cut(s) 744, 1549, 1611, 1976, 2281
HpySE526I ACGT 2 cut(s) 1528, 1814
HspAI GCGC 3 cut(s) 386, 2299, 2476
Ksp22I TGATCA 1 cut(s) 1734
Kzo9I GATC 8 cut(s) 202, 473, 907, 1029, 1576, 1734, 1961, 2425
LguI GCTCTTC 2 cut(s) 140, 1538
LmnI GCTCC 7 cut(s) 625, 751, 859, 985, 1111, 1366, 1618
Lsp1109I GCAGC 5 cut(s) 417, 1109, 1182, 1972, 2000
LweI GCATC 3 cut(s) 226, 1387, 1972
MaeI CTAG 3 cut(s) 944, 1433, 1923
MaeII ACGT 2 cut(s) 1528, 1814
MaeIII GTNAC 3 cut(s) 1759, 2093, 2449
MalI GATC 8 cut(s) 204, 475, 909, 1031, 1578, 1736, 1963, 2427
MbiI CCGCTC 1 cut(s) 558
MboI GATC 8 cut(s) 202, 473, 907, 1029, 1576, 1734, 1961, 2425
MflI RGATCY 2 cut(s) 473, 1576
MhlI GDGCHC 3 cut(s) 439, 990, 1975
MlsI TGGCCA 2 cut(s) 1950, 2463
MluNI TGGCCA 2 cut(s) 1950, 2463
MlyI GAGTC 1 cut(s) 1610
MmeI TCCRAC 5 cut(s) 505, 955, 1504, 1768, 2026
Mox20I TGGCCA 2 cut(s) 1950, 2463
MroXI GAANNNNTTC 1 cut(s) 1565
MscI TGGCCA 2 cut(s) 1950, 2463
MseI TTAA 6 cut(s) 1706, 2106, 2241, 2256, 2394, 2503
MslI CAYNNNNRTG 8 cut(s) 75, 645, 879, 1005, 1203, 1260, 1332, 1893
Msp20I TGGCCA 2 cut(s) 1950, 2463
MspA1I CMGCKG 1 cut(s) 215
MspI CCGG 6 cut(s) 190, 206, 269, 2162, 2331, 2349
MspR9I CCNGG 7 cut(s) 177, 191, 270, 864, 1581, 2162, 2289
MvaI CCWGG 4 cut(s) 177, 864, 1581, 2289
MvnI CGCG 2 cut(s) 2301, 2478
NciI CCSGG 3 cut(s) 191, 270, 2162
NcoI CCATGG 2 cut(s) 486, 495
NdeII GATC 8 cut(s) 202, 473, 907, 1029, 1576, 1734, 1961, 2425
NlaIV GGNNCC 7 cut(s) 436, 475, 492, 753, 861, 1368, 1578
NmeAIII GCCGAG 1 cut(s) 469
NmuCI GTSAC 2 cut(s) 2093, 2449
NspI RCATGY 2 cut(s) 1770, 2315
OliI CACNNNNGTG 1 cut(s) 1203
PagI TCATGA 4 cut(s) 874, 1000, 1255, 1632
PciSI GCTCTTC 2 cut(s) 140, 1538
PdmI GAANNNNTTC 1 cut(s) 1565
PfeI GAWTC 6 cut(s) 311, 1409, 1793, 1933, 2150, 2421
PflMI CCANNNNNTGG 1 cut(s) 590
PkrI GCNGC 7 cut(s) 407, 560, 1099, 1172, 1782, 1987, 1990
PleI GAGTC 1 cut(s) 1609
PpsI GAGTC 1 cut(s) 1609
PshBI ATTAAT 1 cut(s) 2241
Psp124BI GAGCTC 1 cut(s) 990
Psp6I CCWGG 4 cut(s) 175, 862, 1579, 2287
PspFI CCCAGC 1 cut(s) 2326
PspGI CCWGG 4 cut(s) 175, 862, 1579, 2287
PspN4I GGNNCC 7 cut(s) 436, 475, 492, 753, 861, 1368, 1578
PspPI GGNCC 2 cut(s) 490, 2216
PstI CTGCAG 3 cut(s) 1506, 1915, 1990
PstNI CAGNNNCTG 2 cut(s) 1282, 1586
PsuI RGATCY 2 cut(s) 473, 1576
RsaI GTAC 4 cut(s) 280, 1440, 1819, 2080
RsaNI GTAC 4 cut(s) 279, 1439, 1818, 2079
RseI CAYNNNNRTG 8 cut(s) 75, 645, 879, 1005, 1203, 1260, 1332, 1893
SacI GAGCTC 1 cut(s) 990
SapI GCTCTTC 2 cut(s) 140, 1538
SaqAI TTAA 6 cut(s) 1706, 2106, 2241, 2256, 2394, 2503
SatI GCNGC 7 cut(s) 406, 559, 1098, 1171, 1781, 1986, 1989
Sau3AI GATC 8 cut(s) 202, 473, 907, 1029, 1576, 1734, 1961, 2425
Sau96I GGNCC 2 cut(s) 490, 2216
SchI GAGTC 1 cut(s) 1610
ScrFI CCNGG 7 cut(s) 177, 191, 270, 864, 1581, 2162, 2289
SduI GDGCHC 3 cut(s) 439, 990, 1975
SfaNI GCATC 3 cut(s) 226, 1387, 1972
SfcI CTRYAG 3 cut(s) 1502, 1911, 1986
SinI GGWCC 2 cut(s) 490, 2216
SmiMI CAYNNNNRTG 8 cut(s) 75, 645, 879, 1005, 1203, 1260, 1332, 1893
SmlI CTYRAG 2 cut(s) 1715, 2074
SmoI CTYRAG 2 cut(s) 1715, 2074
SsiI CCGC 7 cut(s) 5, 213, 558, 1780, 2020, 2128, 2444
SspI AATATT 1 cut(s) 736
SspMI CTAG 3 cut(s) 944, 1433, 1923
SstI GAGCTC 1 cut(s) 990
StyD4I CCNGG 7 cut(s) 175, 189, 268, 862, 1579, 2160, 2287
StyI CCWWGG 3 cut(s) 486, 495, 2375
TaaI ACNGT 2 cut(s) 1825, 2493
TaiI ACGT 2 cut(s) 1531, 1817
TaqI TCGA 5 cut(s) 990, 1032, 1395, 2417, 2424
TatI WGTACW 1 cut(s) 1817
TauI GCSGC 2 cut(s) 561, 1783
TfiI GAWTC 6 cut(s) 311, 1409, 1793, 1933, 2150, 2421
Tru1I TTAA 6 cut(s) 1706, 2106, 2241, 2256, 2394, 2503
Tru9I TTAA 6 cut(s) 1706, 2106, 2241, 2256, 2394, 2503
TseFI GTSAC 2 cut(s) 2093, 2449
TseI GCWGC 5 cut(s) 405, 1097, 1170, 1985, 1988
Tsp45I GTSAC 2 cut(s) 2093, 2449
TspGWI ACGGA 1 cut(s) 1034
Van91I CCANNNNNTGG 1 cut(s) 590
VpaK11BI GGWCC 2 cut(s) 490, 2216
VspI ATTAAT 1 cut(s) 2241
XapI RAATTY 7 cut(s) 47, 225, 1666, 1673, 1708, 1843, 1868
XceI RCATGY 2 cut(s) 1770, 2315
XcmI CCANNNNNNNNNTGG 1 cut(s) 493
XmnI GAANNNNTTC 1 cut(s) 1565
XspI CTAG 3 cut(s) 944, 1433, 1923
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.