pycom11g17270

cleavage and polyadenylation specificity factor subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0006731
Physical Location & Seq
Forward (+)
19418316 .. 19420457
2142 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2142 bp
ATGGATGAAGGCGACGGGGTCGATCAGATGGATCAGTTTCACCGCAACGAGGCGATCTCGGCGGTGGCTGACGATGGATTTTTGGCCGAGGAGGACGATGATTATGAGGACCTTTACAACGACGTCAATGTCGGCGAGGGGTTTTATCAGTCTATGAGAAAGAACGAGGATTTAGGGTTTAGGAATGAGGTGGTGGAGGAGAAGAAGGTTGAGGTTGAGTCACCCGATGTTGCGCCGTCGGAATCTCAAGGTGGTCCGATACCGGGTGTTGGGGGCGGTAACGGCGAGGGGACTGGTGGGGATGGGGGTGATGGAGGGGTTAGGGGTTCTGGGTATAATAATCAGAATCTAGGGTTTAGAGGGAACGAGATGGGTGCGAAGGGGAGTGGTGGGTTGGGGCCCGTTGGGGGCAGCGGAGGAGGTGGGATTAGGGTTGAATTAGGGCAATCATCAAATAAGGTGAATGAGTTTGAGCAACAAAGTGGGAATAATAGTGGTGTTGGGGTTCAAGGGATTGTTTCTCAGCAGCTGGCGCCCCAATTGCAACAACACCACCAACCACAACCTCCGCCACAACAGCAACAATTACATGGTGCTGCTGTTGTTGGGAATATGGGGAATGAGGGCATGTTGAGACAAGCTGGTGGTGTTGGAAGTGGTAATATGAATGGGATTGGTGGGAATAGTGGTCCGGGGGGAGGATTTGGTGGTGCCGCTGGTGGTGGAGCTGGGACAATATTGTTTGTGGGTGATTTGCATTGGTGGACTACGGATGCAGAGCTGGAGGCAGAGTTGTGTAAGTATGGACCTGTGAAGGAAGTGAAGTTTTTCGACGAGAAAGCAAGTGGGAAGTCAAAAGGGTACTGTCAAGTTGAGTTTTTTAATCCTAATTCTGCCACGGCCTGCAAGGAAGGGATGCACGGGCATGTGTTTAATGGGCGGCCATGCGTTGTTGCGTTCGCATCACCATTCAGTGTTAAGAGAATGGGGGAGGCTCAAGTAAATAGGAACCAGCAGGTTGCCCAAACTGCAGTACCTCAAACTGGTGGGAGGAGGGGGCCCAACGAAGCCGGGAATAAAACTGGTGGGAGTAACATTGCGACTGGTGGGAATTATCAAGGCGGGGAGAGTAATAGAGGTTATGGGAGAGGTAACTGGGGGAGAGGTAATTCTCAGGGTATGGGAAATAGAGGACCAGTTGGTCCAAGGAATAGGGGTGTGATTGGAAGGGGTATAATGAGTAATGGTGGAAATGGGTTTGGGCAAGGTATTGGTGCAACCCCTCCTATGATGCACCCTCAGTCAATGATGGGTCAGGGTTTTGATCCTGCTTTTGGTGCTCCAATGGGGAGAATGGGAAATTATGGAGGCTTTCCTGGTGCTCCTACGCCTCCTTTCTCAGGAATTTTGTCTTCATTTCCACCTGGGGGTGTTGGGCTACCTGGAGTAGCCCCTCATGTGAATCCTGCATTTTTTGGAAGAGGAATGCCCATGAATGGAATGGGAATGATGCCCACATCAGGTGTTGATGGGCCTAATATGGGGATGTGGTCCGATCCTAATATGGGTGGATGGGCTGGTGAAGAGCATGGTGGTGGCAGAGTTGGGGAGTCTAGTTATGGTGAGGAAGCTGCTTCTGACCATCAATATGGTGAGGTTAGTCATGATAGAGGAGGTGCATGGCCAAATGCCATGAAGGAGAAAGATAGAGGTTCAGAGAGGGACTGGTCTGGATCTTCTGATAGAAGGTATCGGGATGATAGAGATCAGGGATATGAGAGAGATGTGCCTAGAGAGAAAGAGGTGGCTCATGACCATGACTTATCTGAAAGAAGGTATCGTGATGATGTTGATGTTAGTCGAGAACGGGACAGAAATCGTGATAGGGGCCGAGAACGTTCTCGAGATCGTGATCGTGACAGAGATCGTGAACGAGAACGGGACCGTGACAGGTACAGGGAAGACAGAGACAGATACGCTGATCATCATAAGTATAGAGACCGTGAACAGGACCATGATGATGAATGGGAGCAGGGACGGTCATCGAGGCACAGTAAGGCACGTGTATCTCAAGAAGATGACCGTCGGTCAAGATCAAGGGATGCTGACTATGGGAAGAGAAGGCGGCTTACTTCCGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000381 GO:0000785 GO:0000790 GO:0000791 GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005694 GO:0005719 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006508 GO:0006509 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022607 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0031982 GO:0032774 GO:0032991 GO:0033119 GO:0033120 GO:0033619 GO:0034097 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043230 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043565 GO:0043933 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044421 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044530 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0048024 GO:0048025 GO:0048026 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050684 GO:0050685 GO:0050686 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051259 GO:0051260 GO:0051716 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070062 GO:0070555 GO:0070887 GO:0071013 GO:0071310 GO:0071345 GO:0071347 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1902494 GO:1902680 GO:1903311 GO:1903312 GO:1903313 GO:1903506 GO:1903508 GO:1903561 GO:1990837 GO:1990904 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
RRM_1

Protein Analysis

714

Amino Acids

76.58

Weight (kDa)

5.48

Isoelectric Point (pI)

38.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 247 - 316 2e-14 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 128, 1200
AatII GACGTC 1 cut(s) 126
Acc36I ACCTGC 1 cut(s) 1006
AccB1I GGYRCC 2 cut(s) 532, 710
AciI CCGC 9 cut(s) 43, 62, 276, 414, 569, 714, 940, 1122, 2125
AclI AACGTT 1 cut(s) 1897
AclWI GGATC 4 cut(s) 39, 1319, 1550, 1741
AcoI YGGCCR 3 cut(s) 84, 941, 1682
AcsI RAATTY 1 cut(s) 1404
AcvI CACGTG 1 cut(s) 2063
AcyI GRCGYC 2 cut(s) 123, 533
AfaI GTAC 3 cut(s) 863, 1035, 1955
AflIII ACRYGT 1 cut(s) 2062
AgsI TTSAA 2 cut(s) 437, 509
AhdI GACNNNNNGTC 1 cut(s) 2086
AjnI CCWGG 3 cut(s) 1375, 1423, 1441
AluBI AGCT 5 cut(s) 529, 641, 728, 781, 1631
AluI AGCT 5 cut(s) 529, 641, 728, 781, 1631
Alw21I GWGCWC 2 cut(s) 1342, 1384
Alw26I GTCTC 3 cut(s) 628, 1962, 1992
AlwI GGATC 4 cut(s) 39, 1319, 1550, 1741
AlwNI CAGNNNCTG 1 cut(s) 529
Ama87I CYCGRG 1 cut(s) 1902
AoxI GGCC 8 cut(s) 84, 398, 900, 941, 1058, 1532, 1682, 1888
ApaI GGGCCC 2 cut(s) 402, 1062
ApeKI GCWGC 4 cut(s) 411, 526, 596, 1631
ApoI RAATTY 1 cut(s) 1404
Asp700I GAANNNNTTC 1 cut(s) 827
AspLEI GCGC 2 cut(s) 235, 535
AsuC2I CCSGG 3 cut(s) 264, 693, 1072
AsuHPI GGTGA 9 cut(s) 32, 213, 320, 472, 761, 957, 1592, 1634, 1664
AvaI CYCGRG 1 cut(s) 1902
AvaII GGWCC 9 cut(s) 109, 254, 689, 806, 1193, 1202, 1551, 1942, 2011
BaeGI GKGCMC 2 cut(s) 402, 1062
BaeI ACNNNNGTAYC 2 cut(s) 1017, 1050
BalI TGGCCA 1 cut(s) 1684
BanI GGYRCC 2 cut(s) 532, 710
BanII GRGCYC 2 cut(s) 402, 1062
BarI GAAGNNNNNNTAC 1 cut(s) 2113
BbrPI CACGTG 1 cut(s) 2063
BbsI GAAGAC 2 cut(s) 1404, 1968
Bbv12I GWGCWC 2 cut(s) 1342, 1384
BbvI GCAGC 4 cut(s) 423, 538, 583, 1618
BccI CCATC 9 cut(s) 22, 68, 296, 305, 364, 1303, 1523, 1566, 1650
BceAI ACGGC 3 cut(s) 220, 298, 915
BcgI CGANNNNNNTGC 2 cut(s) 356, 390
BciT130I CCWGG 3 cut(s) 1377, 1425, 1443
BclI TGATCA 1 cut(s) 1981
BcnI CCSGG 3 cut(s) 264, 693, 1072
BcoDI GTCTC 3 cut(s) 628, 1962, 1992
BfaI CTAG 3 cut(s) 350, 1614, 1791
BfmI CTRYAG 1 cut(s) 1029
BfoI RGCGCY 1 cut(s) 536
BfuAI ACCTGC 1 cut(s) 1006
BisI GCNGC 7 cut(s) 412, 527, 597, 714, 941, 1632, 2126
BlsI GCNGC 7 cut(s) 413, 528, 598, 715, 942, 1633, 2127
Bme1390I CCNGG 6 cut(s) 264, 693, 1072, 1377, 1425, 1443
Bme18I GGWCC 9 cut(s) 109, 254, 689, 806, 1193, 1202, 1551, 1942, 2011
BmeRI GACNNNNNGTC 1 cut(s) 2086
BmeT110I CYCGRG 1 cut(s) 1902
BmiI GGNNCC 9 cut(s) 399, 400, 534, 712, 1010, 1059, 1060, 1889, 1943
BmrFI CCNGG 6 cut(s) 264, 693, 1072, 1377, 1425, 1443
BmrI ACTGGG 1 cut(s) 1165
BmsI GCATC 6 cut(s) 763, 906, 971, 1281, 1500, 2092
BmuI ACTGGG 1 cut(s) 1165
BpiI GAAGAC 2 cut(s) 1404, 1968
BplI GAGNNNNNCTC 2 cut(s) 41, 73
BpmI CTGGAG 2 cut(s) 803, 1464
BpuEI CTTGAG 3 cut(s) 231, 981, 2055
BpuMI CCSGG 3 cut(s) 264, 693, 1072
BsaAI YACGTR 1 cut(s) 2063
BsaBI GATNNNNATC 2 cut(s) 1764, 1911
BsaHI GRCGYC 2 cut(s) 123, 533
BsaI GGTCTC 1 cut(s) 1992
BsaJI CCNNGG 5 cut(s) 87, 692, 897, 1205, 1424
BsaXI ACNNNNNCTCC 2 cut(s) 776, 806
Bse1I ACTGG 7 cut(s) 298, 1048, 1087, 1108, 1160, 1196, 1730
Bse3DI GCAATG 1 cut(s) 1095
Bse8I GATNNNNATC 2 cut(s) 1764, 1911
BseBI CCWGG 3 cut(s) 1377, 1425, 1443
BseDI CCNNGG 5 cut(s) 87, 692, 897, 1205, 1424
BseGI GGATG 8 cut(s) 10, 307, 778, 921, 1551, 1577, 1762, 2107
BseJI GATNNNNATC 2 cut(s) 1764, 1911
BseMI GCAATG 1 cut(s) 1095
BseMII CTCAG 4 cut(s) 536, 1187, 1313, 1413
BseNI ACTGG 7 cut(s) 298, 1048, 1087, 1108, 1160, 1196, 1730
BseRI GAGGAG 5 cut(s) 104, 212, 432, 1066, 1686
BseSI GKGCMC 2 cut(s) 402, 1062
BseXI GCAGC 4 cut(s) 423, 538, 583, 1618
BseYI CCCAGC 1 cut(s) 728
BshFI GGCC 8 cut(s) 86, 400, 902, 943, 1060, 1534, 1684, 1890
BshNI GGYRCC 2 cut(s) 532, 710
BsiHKAI GWGCWC 2 cut(s) 1342, 1384
BsiHKCI CYCGRG 1 cut(s) 1902
BsiSI CCGG 3 cut(s) 263, 692, 1071
BslFI GGGAC 6 cut(s) 304, 745, 1736, 1883, 1955, 2049
BsmAI GTCTC 3 cut(s) 628, 1962, 1992
BsmFI GGGAC 6 cut(s) 304, 745, 1736, 1883, 1955, 2049
BsmI GAATGC 1 cut(s) 1491
BsnI GGCC 8 cut(s) 86, 400, 902, 943, 1060, 1534, 1684, 1890
Bso31I GGTCTC 1 cut(s) 1992
BsoBI CYCGRG 1 cut(s) 1902
Bsp120I GGGCCC 2 cut(s) 398, 1058
Bsp1286I GDGCHC 4 cut(s) 402, 1062, 1342, 1384
BspACI CCGC 9 cut(s) 43, 62, 276, 414, 569, 714, 940, 1122, 2125
BspANI GGCC 8 cut(s) 86, 400, 902, 943, 1060, 1534, 1684, 1890
BspCNI CTCAG 4 cut(s) 535, 1186, 1312, 1412
BspHI TCATGA 2 cut(s) 1663, 1810
BspLI GGNNCC 9 cut(s) 399, 400, 534, 712, 1010, 1059, 1060, 1889, 1943
BspMAI CTGCAG 1 cut(s) 1033
BspMI ACCTGC 1 cut(s) 1006
BspPI GGATC 4 cut(s) 39, 1319, 1550, 1741
BspQI GCTCTTC 1 cut(s) 1578
BspT107I GGYRCC 2 cut(s) 532, 710
BspTNI GGTCTC 1 cut(s) 1992
BsrDI GCAATG 1 cut(s) 1095
BsrI ACTGG 7 cut(s) 298, 1048, 1087, 1108, 1160, 1196, 1730
BssECI CCNNGG 5 cut(s) 87, 692, 897, 1205, 1424
BssNI GRCGYC 2 cut(s) 123, 533
BssT1I CCWWGG 1 cut(s) 1205
Bst2UI CCWGG 3 cut(s) 1377, 1425, 1443
Bst4CI ACNGT 6 cut(s) 866, 1946, 2003, 2040, 2054, 2084
Bst6I CTCTTC 3 cut(s) 1474, 1578, 2111
BstACI GRCGYC 2 cut(s) 123, 533
BstBAI YACGTR 1 cut(s) 2063
BstC8I GCNNGC 2 cut(s) 531, 904
BstDEI CTNAG 4 cut(s) 522, 1173, 1299, 1399
BstDSI CCRYGG 1 cut(s) 897
BstENI CCTNNNNNAGG 1 cut(s) 1398
BstF5I GGATG 8 cut(s) 10, 307, 778, 921, 1551, 1577, 1762, 2107
BstH2I RGCGCY 1 cut(s) 536
BstHHI GCGC 2 cut(s) 235, 535
BstMAI GTCTC 3 cut(s) 628, 1962, 1992
BstMWI GCNNNNNNNGC 7 cut(s) 59, 282, 532, 541, 577, 1028, 1337
BstNI CCWGG 3 cut(s) 1377, 1425, 1443
BstNSI RCATGY 2 cut(s) 631, 929
BstSCI CCNGG 6 cut(s) 262, 691, 1070, 1375, 1423, 1441
BstSFI CTRYAG 1 cut(s) 1029
BstSLI GKGCMC 2 cut(s) 402, 1062
BstV1I GCAGC 4 cut(s) 423, 538, 583, 1618
BstV2I GAAGAC 2 cut(s) 1404, 1968
BstX2I RGATCY 1 cut(s) 1733
BstXI CCANNNNNNTGG 1 cut(s) 1649
BstYI RGATCY 1 cut(s) 1733
BsuRI GGCC 8 cut(s) 86, 400, 902, 943, 1060, 1534, 1684, 1890
BtgI CCRYGG 1 cut(s) 897
BtsCI GGATG 8 cut(s) 10, 307, 778, 921, 1551, 1577, 1762, 2107
BtsIMutI CAGTG 1 cut(s) 979
BveI ACCTGC 1 cut(s) 1006
Cac8I GCNNGC 2 cut(s) 531, 904
CaiI CAGNNNCTG 1 cut(s) 529
CciI TCATGA 2 cut(s) 1663, 1810
CfoI GCGC 2 cut(s) 235, 535
Csp6I GTAC 3 cut(s) 862, 1034, 1954
CviQI GTAC 3 cut(s) 862, 1034, 1954
DdeI CTNAG 4 cut(s) 522, 1173, 1299, 1399
DinI GGCGCC 1 cut(s) 534
DrdI GACNNNNNNGTC 2 cut(s) 128, 1200
DriI GACNNNNNGTC 1 cut(s) 2086
DseDI GACNNNNNNGTC 2 cut(s) 128, 1200
EaeI YGGCCR 3 cut(s) 84, 941, 1682
Eam1104I CTCTTC 3 cut(s) 1474, 1578, 2111
Eam1105I GACNNNNNGTC 1 cut(s) 2086
EarI CTCTTC 3 cut(s) 1474, 1578, 2111
EciI GGCGGA 1 cut(s) 558
Eco130I CCWWGG 1 cut(s) 1205
Eco24I GRGCYC 2 cut(s) 402, 1062
Eco31I GGTCTC 1 cut(s) 1992
Eco47I GGWCC 9 cut(s) 109, 254, 689, 806, 1193, 1202, 1551, 1942, 2011
Eco72I CACGTG 1 cut(s) 2063
Eco88I CYCGRG 1 cut(s) 1902
EcoNI CCTNNNNNAGG 1 cut(s) 1398
EcoO109I RGGNCCY 3 cut(s) 109, 398, 1058
EcoRII CCWGG 3 cut(s) 1375, 1423, 1441
EcoT14I CCWWGG 1 cut(s) 1205
EcoT38I GRGCYC 2 cut(s) 402, 1062
EgeI GGCGCC 1 cut(s) 534
EheI GGCGCC 1 cut(s) 534
ErhI CCWWGG 1 cut(s) 1205
FaqI GGGAC 6 cut(s) 304, 745, 1736, 1883, 1955, 2049
FauI CCCGC 1 cut(s) 1115
FbaI TGATCA 1 cut(s) 1981
Fnu4HI GCNGC 7 cut(s) 412, 527, 597, 714, 941, 1632, 2126
FokI GGATG 8 cut(s) 17, 314, 785, 928, 1558, 1584, 1769, 2114
FriOI GRGCYC 2 cut(s) 402, 1062
Fsp4HI GCNGC 7 cut(s) 412, 527, 597, 714, 941, 1632, 2126
FspBI CTAG 3 cut(s) 350, 1614, 1791
GlaI GCGC 2 cut(s) 234, 534
GluI GCNGC 7 cut(s) 412, 527, 597, 714, 941, 1632, 2126
GsaI CCCAGC 1 cut(s) 732
GsuI CTGGAG 2 cut(s) 803, 1464
HaeII RGCGCY 1 cut(s) 536
HaeIII GGCC 8 cut(s) 86, 400, 902, 943, 1060, 1534, 1684, 1890
HapII CCGG 3 cut(s) 263, 692, 1071
HhaI GCGC 2 cut(s) 235, 535
Hin1I GRCGYC 2 cut(s) 123, 533
Hin6I GCGC 2 cut(s) 233, 533
HinP1I GCGC 2 cut(s) 233, 533
HinfI GANTC 5 cut(s) 218, 242, 346, 1462, 1610
HpaII CCGG 3 cut(s) 263, 692, 1071
HphI GGTGA 9 cut(s) 32, 213, 320, 472, 761, 957, 1592, 1634, 1664
Hpy166II GTNNAC 3 cut(s) 765, 1931, 2006
Hpy8I GTNNAC 3 cut(s) 765, 1931, 2006
Hpy99I CGWCG 5 cut(s) 17, 125, 241, 836, 2088
HpyAV CCTTC 9 cut(s) 199, 373, 808, 905, 1221, 1690, 1740, 1827, 2115
HpyCH4III ACNGT 6 cut(s) 866, 1946, 2003, 2040, 2054, 2084
HpyCH4IV ACGT 3 cut(s) 123, 1897, 2062
HpyF10VI GCNNNNNNNGC 7 cut(s) 59, 282, 532, 541, 577, 1028, 1337
HpyF3I CTNAG 4 cut(s) 522, 1173, 1299, 1399
HpySE526I ACGT 3 cut(s) 123, 1897, 2062
Hsp92I GRCGYC 2 cut(s) 123, 533
HspAI GCGC 2 cut(s) 233, 533
KasI GGCGCC 1 cut(s) 532
Ksp22I TGATCA 1 cut(s) 1981
LguI GCTCTTC 1 cut(s) 1578
LmnI GCTCC 4 cut(s) 725, 1345, 1387, 2029
Lsp1109I GCAGC 4 cut(s) 423, 538, 583, 1618
LweI GCATC 6 cut(s) 763, 906, 971, 1281, 1500, 2092
MaeI CTAG 3 cut(s) 350, 1614, 1791
MaeII ACGT 3 cut(s) 123, 1897, 2062
MaeIII GTNAC 6 cut(s) 219, 278, 1091, 1151, 1916, 1946
MboII GAAGA 8 cut(s) 214, 1404, 1491, 1595, 1728, 1973, 2087, 2128
MfeI CAATTG 1 cut(s) 539
MflI RGATCY 1 cut(s) 1733
MhlI GDGCHC 4 cut(s) 402, 1062, 1342, 1384
MlsI TGGCCA 1 cut(s) 1684
MluCI AATT 8 cut(s) 437, 539, 584, 889, 1111, 1168, 1360, 1404
MluNI TGGCCA 1 cut(s) 1684
Mly113I GGCGCC 1 cut(s) 533
MlyI GAGTC 2 cut(s) 227, 1619
MmeI TCCRAC 2 cut(s) 219, 631
Mox20I TGGCCA 1 cut(s) 1684
MroXI GAANNNNTTC 1 cut(s) 827
MscI TGGCCA 1 cut(s) 1684
MseI TTAA 3 cut(s) 882, 933, 978
MslI CAYNNNNRTG 5 cut(s) 924, 1593, 1647, 1815, 2019
Msp20I TGGCCA 1 cut(s) 1684
MspA1I CMGCKG 3 cut(s) 414, 529, 716
MspI CCGG 3 cut(s) 263, 692, 1071
MspR9I CCNGG 6 cut(s) 264, 693, 1072, 1377, 1425, 1443
MunI CAATTG 1 cut(s) 539
Mva1269I GAATGC 1 cut(s) 1491
MvaI CCWGG 3 cut(s) 1377, 1425, 1443
MwoI GCNNNNNNNGC 7 cut(s) 59, 282, 532, 541, 577, 1028, 1337
NarI GGCGCC 1 cut(s) 533
NciI CCSGG 3 cut(s) 264, 693, 1072
NlaIV GGNNCC 9 cut(s) 399, 400, 534, 712, 1010, 1059, 1060, 1889, 1943
NmeAIII GCCGAG 3 cut(s) 38, 112, 1916
NmuCI GTSAC 3 cut(s) 219, 1916, 1946
NspI RCATGY 2 cut(s) 631, 929
PaeR7I CTCGAG 1 cut(s) 1902
PagI TCATGA 2 cut(s) 1663, 1810
PciSI GCTCTTC 1 cut(s) 1578
PctI GAATGC 1 cut(s) 1491
PdmI GAANNNNTTC 1 cut(s) 827
PfeI GAWTC 3 cut(s) 242, 346, 1462
PflFI GACNNNGTC 1 cut(s) 17
PkrI GCNGC 7 cut(s) 413, 528, 598, 715, 942, 1633, 2127
PleI GAGTC 2 cut(s) 226, 1618
PluTI GGCGCC 1 cut(s) 536
PmaCI CACGTG 1 cut(s) 2063
PmlI CACGTG 1 cut(s) 2063
PpsI GAGTC 2 cut(s) 226, 1618
Ppu21I YACGTR 1 cut(s) 2063
PpuMI RGGWCCY 1 cut(s) 109
Psp1406I AACGTT 1 cut(s) 1897
Psp5II RGGWCCY 1 cut(s) 109
Psp6I CCWGG 3 cut(s) 1375, 1423, 1441
PspCI CACGTG 1 cut(s) 2063
PspFI CCCAGC 1 cut(s) 728
PspGI CCWGG 3 cut(s) 1375, 1423, 1441
PspN4I GGNNCC 9 cut(s) 399, 400, 534, 712, 1010, 1059, 1060, 1889, 1943
PspOMI GGGCCC 2 cut(s) 398, 1058
PspPPI RGGWCCY 1 cut(s) 109
PstI CTGCAG 1 cut(s) 1033
PstNI CAGNNNCTG 1 cut(s) 529
PsuI RGATCY 1 cut(s) 1733
PsyI GACNNNGTC 1 cut(s) 17
PvuII CAGCTG 1 cut(s) 529
RsaI GTAC 3 cut(s) 863, 1035, 1955
RsaNI GTAC 3 cut(s) 862, 1034, 1954
RseI CAYNNNNRTG 5 cut(s) 924, 1593, 1647, 1815, 2019
SapI GCTCTTC 1 cut(s) 1578
SaqAI TTAA 3 cut(s) 882, 933, 978
SatI GCNGC 7 cut(s) 412, 527, 597, 714, 941, 1632, 2126
SchI GAGTC 2 cut(s) 227, 1619
ScrFI CCNGG 6 cut(s) 264, 693, 1072, 1377, 1425, 1443
SduI GDGCHC 4 cut(s) 402, 1062, 1342, 1384
SfaNI GCATC 6 cut(s) 763, 906, 971, 1281, 1500, 2092
SfcI CTRYAG 1 cut(s) 1029
SfoI GGCGCC 1 cut(s) 534
Sfr274I CTCGAG 1 cut(s) 1902
SinI GGWCC 9 cut(s) 109, 254, 689, 806, 1193, 1202, 1551, 1942, 2011
SlaI CTCGAG 1 cut(s) 1902
SmiMI CAYNNNNRTG 5 cut(s) 924, 1593, 1647, 1815, 2019
SmlI CTYRAG 4 cut(s) 246, 996, 1902, 2070
SmoI CTYRAG 4 cut(s) 246, 996, 1902, 2070
Sse9I AATT 8 cut(s) 437, 539, 584, 889, 1111, 1168, 1360, 1404
SsiI CCGC 9 cut(s) 43, 62, 276, 414, 569, 714, 940, 1122, 2125
SspDI GGCGCC 1 cut(s) 532
SspI AATATT 1 cut(s) 738
SspMI CTAG 3 cut(s) 350, 1614, 1791
StyD4I CCNGG 6 cut(s) 262, 691, 1070, 1375, 1423, 1441
StyI CCWWGG 1 cut(s) 1205
TaaI ACNGT 6 cut(s) 866, 1946, 2003, 2040, 2054, 2084
TaiI ACGT 3 cut(s) 126, 1900, 2065
TaqI TCGA 5 cut(s) 21, 831, 1861, 1903, 2045
TaqII GACCGA 1 cut(s) 2076
TasI AATT 8 cut(s) 437, 539, 584, 889, 1111, 1168, 1360, 1404
TauI GCSGC 3 cut(s) 716, 943, 2128
TfiI GAWTC 3 cut(s) 242, 346, 1462
Tru1I TTAA 3 cut(s) 882, 933, 978
Tru9I TTAA 3 cut(s) 882, 933, 978
TscAI CASTG 1 cut(s) 979
TseFI GTSAC 3 cut(s) 219, 1916, 1946
TseI GCWGC 4 cut(s) 411, 526, 596, 1631
Tsp45I GTSAC 3 cut(s) 219, 1916, 1946
TspDTI ATGAA 6 cut(s) 21, 680, 1404, 1508, 1709, 2037
TspGWI ACGGA 1 cut(s) 785
TspRI CASTG 1 cut(s) 979
Tth111I GACNNNGTC 1 cut(s) 17
VpaK11BI GGWCC 9 cut(s) 109, 254, 689, 806, 1193, 1202, 1551, 1942, 2011
XagI CCTNNNNNAGG 1 cut(s) 1398
XapI RAATTY 1 cut(s) 1404
XceI RCATGY 2 cut(s) 631, 929
XcmI CCANNNNNNNNNTGG 1 cut(s) 1498
XhoI CTCGAG 1 cut(s) 1902
XmnI GAANNNNTTC 1 cut(s) 827
XspI CTAG 3 cut(s) 350, 1614, 1791
ZraI GACGTC 1 cut(s) 124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.