Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0003641

Physical Location & Seq

Genomic Coordinates Forward (+)

4273640 .. 4275490

Gene Structure 1851 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGGATCCCTTTCTTTTCTGTTCTCTTCTCTTCTCTCTCTCTCTCTCTCTCAAACAAAAGAGAGAAAAAAACAACTCAACTCAACAGCTGCTGAGCTGCCACCTTCCCCCTTCTGCAAAGAATTTCATGCTCCACAGTCCACACGAGAGAGACCCACTAGGCCAGCTTTCTACAGTTGTTTGTACCAGGAGAAACCAAGGAATAAAAATAAAAATAAAAAAAAAAAATAAAAAAATAATAATTGGATCCGCTGCAGGCCCAATTTTCCACTACAATTCCTCGACAAAACCAACCAAGTCGATGATCGATCCAGAACCAGCCGCTGCATGCTCTACTGTCGCCGATCCCGGTTCAGACCCCAACAGAACCGGTTCCTCAATTCAAGAACAACAACCCAGTAACAAGAAGCCTCCCCCGAAGAGGACATCCACCAAAGACAGGCACACGAAAGTCGACGGGCGGGGCCGCCGCATCCGCATGCCCGCCACGTGCGCAGCTAGGGTTTTCCAGCTCACGCGGGAGCTAGGGCACAAGTCCGACGGTGAGACCATCGAGTGGCTCCTTCAGCAGGCCGAGCCTTCTGTCATCGCCGCCACCGGAACCGGCACTATTCCCGCCAATTTCACATCCCTCAACATCTCGCTCAGGAGCTCCGGGTCCAGCATGTCGGCGCCGTCGCACTACTTGAGGACTAACGCGAGTAATTATTACTTCAACTCCAACAACTTCGGAGCAGCTGCGCCCACCTCGCAATTGGGTACGGCGGAGCACTCGCAGCGCGGAAGGATTTTGTTTCCCGGTGCAGGGTTAATGTCGTCTGAGAGTTCGCCTCCGTCGTCGATGTTGTGGAATTTCAATAATTCTGGCAACGATAATATAAGTAATAATACAATGTTGGAAGCCAAGCAAGAGTTAGGTGATCATCATCAGGCTGTTACTCTCGATGAGGCAAGTAGTATGGCGAGAAAGAGAATTCGGCCGGAGCAAGATTTGTTATCCGCGAGCACAGGTTCAATTCCTGCGAGTCAAAATACAATTCCGGCTACATTTTGGATGGTGGCAAATAATAACCCTAGTAATAGCCAAGGGAGTATTCACCACGAACACATTAATTCCATTAATCCCATGTGGACAATTCCGACAGTTGGTAACGCCGGCAATATGTATCGAGGGCCCGTGGCTGGCGGTGGCCACGGCTTGCATTTTATGAATTTCGCTTCTCCATTGGCTATATTGCCTGGCCAACAATTGGGTACGGGGTCAATTACAACAACTCAAGGCGCCGCCGACAGCCACTTGGGAATGATGGCCGCGCTCAACGCATATCGGCCTATTCTTGGCGGGGTAGCCATGGAGTCTCCTGCGAATGGGCAGCATCCGCACCAGGGAGCGGACGAGGGACATGATCGTAATACCAATGCTAGAGTACTATGGTTTTTGGTACTTTTATTTTTGTTTTTTAGAATTAATAATTACTATGAAGGCGCAAGTTTGATTGCTTTGAATTTTGAGTTAATGTTGGATATTTGGTGTGAGTCAGCTAGTAAGAAGATTTTATCAGGGTTTTTTATTAGAGGAAAAATTTCGTTTATAATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006355 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0007623 GO:0008150 GO:0008152 GO:0008283 GO:0009058 GO:0009059 GO:0009719 GO:0009725 GO:0009735 GO:0009791 GO:0009889 GO:0009908 GO:0009962 GO:0009987 GO:0010033 GO:0010229 GO:0010252 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022402 GO:0022414 GO:0031323 GO:0031326 GO:0031537 GO:0031540 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0042023 GO:0042221 GO:0042592 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044786 GO:0046483 GO:0048367 GO:0048438 GO:0048467 GO:0048511 GO:0048608 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:0090304 GO:0090567 GO:0140110 GO:1901360 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TCP

Protein Analysis

533

Amino Acids

57.77

Weight (kDa)

9.54

Isoelectric Point (pI)

45.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCP	PF03634	142 - 328	1.6e-34	TCP family transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69690
fragaria_vesca	FvH4_4g31520 FvH4_5g15150
malus_domestica	MD06G1191800.v1.1 MD13G1073500.v1.1 MD14G1198200.v1.1 MD16G1074800.v1.1
prunus_persica	Prupe.1G272500_v2.0.a1 Prupe.5G191200_v2.0.a1
pyrus_communis	pycom06g16990 pycom13g06580 pycom14g16460 pycom16g06480
rosa_chinensis	RchiOBHm_Chr4g0440011 RchiOBHm_Chr7g0181021
rosa_laevigata	RLG00000005218 RLG00000006215
rosa_multiflora	Rmu_sc0006000.1_g000009 Rmu_sc0007079.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272330 Rroxscaffold_5G00380970
rosa_rugosa	Rorug04G0323300 Rorug06G0438600
rosa_samantha	Rh4AG295500 Rh4AG374300 Rh4BG301900 Rh4BG386600 Rh4CG401100 Rh4DG380900 Rh7AG039800 Rh7BG039200 Rh7CG041000 Rh7DG039400
rosa_wichuraiana	Rw4G032020 Rw7G003280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1592
Acc16I	TGCGCA	1 cut(s)	493
AccB1I	GGYRCC	2 cut(s)	670, 1280
AccB7I	CCANNNNNTGG	2 cut(s)	555, 1249
AccBSI	CCGCTC	1 cut(s)	1391
AccI	GTMKAC	1 cut(s)	453
AccII	CGCG	5 cut(s)	517, 698, 780, 1001, 1313
AclWI	GGATC	5 cut(s)	12, 240, 253, 302, 338
AcoI	YGGCCR	4 cut(s)	977, 1189, 1240, 1308
AcsI	RAATTY	6 cut(s)	121, 850, 972, 1210, 1504, 1581
AcuI	CTGAAG	1 cut(s)	548
AcvI	CACGTG	1 cut(s)	489
AcyI	GRCGYC	2 cut(s)	671, 1281
AfaI	GTAC	5 cut(s)	184, 760, 1255, 1428, 1443
AgeI	ACCGGT	1 cut(s)	368
AgsI	TTSAA	5 cut(s)	383, 715, 856, 1014, 1504
AjnI	CCWGG	3 cut(s)	185, 1237, 1383
AjuI	GAANNNNNNNTTGG	2 cut(s)	1077, 1109
AluBI	AGCT	9 cut(s)	88, 96, 166, 497, 511, 523, 651, 737, 1541
AluI	AGCT	9 cut(s)	88, 96, 166, 497, 511, 523, 651, 737, 1541
Alw21I	GWGCWC	3 cut(s)	653, 771, 1007
Alw26I	GTCTC	3 cut(s)	144, 539, 1362
AlwI	GGATC	5 cut(s)	12, 240, 253, 302, 338
AlwNI	CAGNNNCTG	2 cut(s)	91, 323
ApaI	GGGCCC	1 cut(s)	1176
ApeKI	GCWGC	9 cut(s)	88, 96, 251, 323, 494, 734, 737, 775, 1372
ApoI	RAATTY	6 cut(s)	121, 850, 972, 1210, 1504, 1581
AseI	ATTAAT	3 cut(s)	1110, 1119, 1467
AsiGI	ACCGGT	1 cut(s)	368
Asp700I	GAANNNNTTC	2 cut(s)	370, 1582
AspLEI	GCGC	7 cut(s)	494, 673, 742, 780, 1283, 1315, 1487
AspS9I	GGNCC	5 cut(s)	257, 463, 657, 1172, 1173
AsuC2I	CCSGG	3 cut(s)	348, 655, 798
AsuHPI	GGTGA	3 cut(s)	554, 929, 1088
AvaII	GGWCC	1 cut(s)	657
BaeGI	GKGCMC	2 cut(s)	531, 1176
BalI	TGGCCA	2 cut(s)	1191, 1242
BamHI	GGATCC	2 cut(s)	4, 245
BanI	GGYRCC	2 cut(s)	670, 1280
BanII	GRGCYC	2 cut(s)	653, 1176
BauI	CACGAG	1 cut(s)	143
BbrPI	CACGTG	1 cut(s)	489
Bbv12I	GWGCWC	3 cut(s)	653, 771, 1007
BbvI	GCAGC	9 cut(s)	75, 83, 238, 310, 506, 724, 746, 787, 1384
BccI	CCATC	3 cut(s)	557, 1048, 1300
BceAI	ACGGC	3 cut(s)	658, 777, 1210
BciT130I	CCWGG	3 cut(s)	187, 1239, 1385
BclI	TGATCA	1 cut(s)	919
BcnI	CCSGG	3 cut(s)	348, 655, 798
BcoDI	GTCTC	3 cut(s)	144, 539, 1362
BfaI	CTAG	6 cut(s)	158, 498, 524, 1074, 1422, 1542
BfmI	CTRYAG	2 cut(s)	171, 252
BfoI	RGCGCY	2 cut(s)	674, 1284
BlpI	GCTNAGC	1 cut(s)	92
BmcAI	AGTACT	1 cut(s)	1428
Bme1390I	CCNGG	6 cut(s)	187, 348, 655, 798, 1239, 1385
Bme18I	GGWCC	1 cut(s)	657
BmgT120I	GGNCC	5 cut(s)	257, 463, 657, 1172, 1173
BmrFI	CCNGG	6 cut(s)	187, 348, 655, 798, 1239, 1385
BmrI	ACTGGG	1 cut(s)	390
BmsI	GCATC	2 cut(s)	480, 1384
BmuI	ACTGGG	1 cut(s)	390
BplI	GAGNNNNNCTC	2 cut(s)	814, 846
Bpu10I	CCTNAGC	1 cut(s)	644
Bpu1102I	GCTNAGC	1 cut(s)	92
BpuEI	CTTGAG	2 cut(s)	706, 1260
BpuMI	CCSGG	3 cut(s)	348, 655, 798
Bsa29I	ATCGAT	1 cut(s)	306
BsaAI	YACGTR	1 cut(s)	489
BsaBI	GATNNNNATC	1 cut(s)	924
BsaHI	GRCGYC	2 cut(s)	671, 1281
BsaI	GGTCTC	2 cut(s)	144, 539
BsaJI	CCNNGG	6 cut(s)	196, 1084, 1176, 1192, 1350, 1384
BsaWI	WCCGGW	2 cut(s)	368, 596
BsaXI	ACNNNNNCTCC	2 cut(s)	701, 731
Bse118I	RCCGGY	3 cut(s)	368, 602, 1154
Bse1I	ACTGG	1 cut(s)	396
Bse8I	GATNNNNATC	1 cut(s)	924
BseBI	CCWGG	3 cut(s)	187, 1239, 1385
BseCI	ATCGAT	1 cut(s)	306
BseDI	CCNNGG	6 cut(s)	196, 1084, 1176, 1192, 1350, 1384
BseGI	GGATG	5 cut(s)	425, 471, 626, 1059, 1375
BseJI	GATNNNNATC	1 cut(s)	924
BseMII	CTCAG	3 cut(s)	83, 658, 810
BseNI	ACTGG	1 cut(s)	396
BseSI	GKGCMC	2 cut(s)	531, 1176
BseX3I	CGGCCG	1 cut(s)	977
BseXI	GCAGC	9 cut(s)	75, 83, 238, 310, 506, 724, 746, 787, 1384
BsgI	GTGCAG	1 cut(s)	822
Bsh1236I	CGCG	5 cut(s)	517, 698, 780, 1001, 1313
Bsh1285I	CGRYCG	1 cut(s)	980
BshNI	GGYRCC	2 cut(s)	670, 1280
BshTI	ACCGGT	1 cut(s)	368
BshVI	ATCGAT	1 cut(s)	306
BsiEI	CGRYCG	1 cut(s)	980
BsiHKAI	GWGCWC	3 cut(s)	653, 771, 1007
BsiSI	CCGG	9 cut(s)	348, 369, 597, 603, 654, 798, 980, 1040, 1155
BslFI	GGGAC	1 cut(s)	1413
BsmAI	GTCTC	3 cut(s)	144, 539, 1362
BsmFI	GGGAC	1 cut(s)	1413
Bso31I	GGTCTC	2 cut(s)	144, 539
Bsp120I	GGGCCC	1 cut(s)	1172
Bsp1286I	GDGCHC	5 cut(s)	531, 653, 771, 1007, 1176
Bsp143I	GATC	7 cut(s)	4, 245, 303, 307, 343, 919, 1405
Bsp1720I	GCTNAGC	1 cut(s)	92
Bsp19I	CCATGG	1 cut(s)	1350
BspCNI	CTCAG	3 cut(s)	84, 657, 811
BspDI	ATCGAT	1 cut(s)	306
BspFNI	CGCG	5 cut(s)	517, 698, 780, 1001, 1313
BspMAI	CTGCAG	1 cut(s)	256
BspPI	GGATC	5 cut(s)	12, 240, 253, 302, 338
BspT107I	GGYRCC	2 cut(s)	670, 1280
BspTNI	GGTCTC	2 cut(s)	144, 539
BsrBI	CCGCTC	1 cut(s)	1391
BsrFI	RCCGGY	3 cut(s)	368, 602, 1154
BsrI	ACTGG	1 cut(s)	396
BssAI	RCCGGY	3 cut(s)	368, 602, 1154
BssECI	CCNNGG	6 cut(s)	196, 1084, 1176, 1192, 1350, 1384
BssMI	GATC	7 cut(s)	4, 245, 303, 307, 343, 919, 1405
BssNI	GRCGYC	2 cut(s)	671, 1281
BssSI	CACGAG	1 cut(s)	143
BssT1I	CCWWGG	3 cut(s)	196, 1084, 1350
Bst2BI	CACGAG	1 cut(s)	143
Bst2UI	CCWGG	3 cut(s)	187, 1239, 1385
Bst4CI	ACNGT	5 cut(s)	137, 175, 337, 542, 1144
Bst6I	CTCTTC	3 cut(s)	30, 35, 413
BstACI	GRCGYC	2 cut(s)	671, 1281
BstBAI	YACGTR	1 cut(s)	489
BstDEI	CTNAG	3 cut(s)	92, 644, 819
BstDSI	CCRYGG	3 cut(s)	1176, 1192, 1350
BstENI	CCTNNNNNAGG	1 cut(s)	566
BstF5I	GGATG	5 cut(s)	425, 471, 626, 1059, 1375
BstFNI	CGCG	5 cut(s)	517, 698, 780, 1001, 1313
BstH2I	RGCGCY	2 cut(s)	674, 1284
BstHHI	GCGC	7 cut(s)	494, 673, 742, 780, 1283, 1315, 1487
BstKTI	GATC	7 cut(s)	7, 248, 306, 310, 346, 922, 1408
BstMAI	GTCTC	3 cut(s)	144, 539, 1362
BstMBI	GATC	7 cut(s)	4, 245, 303, 307, 343, 919, 1405
BstMCI	CGRYCG	1 cut(s)	980
BstMWI	GCNNNNNNNGC	8 cut(s)	474, 491, 565, 574, 748, 775, 1319, 1378
BstNI	CCWGG	3 cut(s)	187, 1239, 1385
BstNSI	RCATGY	3 cut(s)	330, 481, 667
BstSCI	CCNGG	6 cut(s)	185, 346, 653, 796, 1237, 1383
BstSFI	CTRYAG	2 cut(s)	171, 252
BstSLI	GKGCMC	2 cut(s)	531, 1176
BstUI	CGCG	5 cut(s)	517, 698, 780, 1001, 1313
BstV1I	GCAGC	9 cut(s)	75, 83, 238, 310, 506, 724, 746, 787, 1384
BstX2I	RGATCY	2 cut(s)	4, 245
BstYI	RGATCY	2 cut(s)	4, 245
BstZI	CGGCCG	1 cut(s)	977
Bsu15I	ATCGAT	1 cut(s)	306
BsuTUI	ATCGAT	1 cut(s)	306
BtgI	CCRYGG	3 cut(s)	1176, 1192, 1350
BtgZI	GCGATG	1 cut(s)	571
BtsCI	GGATG	5 cut(s)	425, 471, 626, 1059, 1375
CaiI	CAGNNNCTG	2 cut(s)	91, 323
CfoI	GCGC	7 cut(s)	494, 673, 742, 780, 1283, 1315, 1487
Cfr10I	RCCGGY	3 cut(s)	368, 602, 1154
Cfr13I	GGNCC	5 cut(s)	257, 463, 657, 1172, 1173
ClaI	ATCGAT	1 cut(s)	306
Csp6I	GTAC	5 cut(s)	183, 759, 1254, 1427, 1442
CspAI	ACCGGT	1 cut(s)	368
CviAII	CATG	7 cut(s)	127, 327, 478, 664, 1126, 1351, 1403
CviQI	GTAC	5 cut(s)	183, 759, 1254, 1427, 1442
DdeI	CTNAG	3 cut(s)	92, 644, 819
DinI	GGCGCC	2 cut(s)	672, 1282
DpnI	GATC	7 cut(s)	6, 247, 305, 309, 345, 921, 1407
DpnII	GATC	7 cut(s)	4, 245, 303, 307, 343, 919, 1405
EaeI	YGGCCR	4 cut(s)	977, 1189, 1240, 1308
EagI	CGGCCG	1 cut(s)	977
Eam1104I	CTCTTC	3 cut(s)	30, 35, 413
EarI	CTCTTC	3 cut(s)	30, 35, 413
EciI	GGCGGA	1 cut(s)	779
Ecl136II	GAGCTC	1 cut(s)	651
EclXI	CGGCCG	1 cut(s)	977
Eco130I	CCWWGG	3 cut(s)	196, 1084, 1350
Eco24I	GRGCYC	2 cut(s)	653, 1176
Eco31I	GGTCTC	2 cut(s)	144, 539
Eco47I	GGWCC	1 cut(s)	657
Eco52I	CGGCCG	1 cut(s)	977
Eco53kI	GAGCTC	1 cut(s)	651
Eco57I	CTGAAG	1 cut(s)	548
Eco72I	CACGTG	1 cut(s)	489
EcoICRI	GAGCTC	1 cut(s)	651
EcoNI	CCTNNNNNAGG	1 cut(s)	566
EcoO109I	RGGNCCY	1 cut(s)	1172
EcoRI	GAATTC	1 cut(s)	972
EcoRII	CCWGG	3 cut(s)	185, 1237, 1383
EcoT14I	CCWWGG	3 cut(s)	196, 1084, 1350
EcoT38I	GRGCYC	2 cut(s)	653, 1176
EgeI	GGCGCC	2 cut(s)	672, 1282
EheI	GGCGCC	2 cut(s)	672, 1282
ErhI	CCWWGG	3 cut(s)	196, 1084, 1350
FaeI	CATG	7 cut(s)	130, 330, 481, 667, 1129, 1354, 1406
FaqI	GGGAC	1 cut(s)	1413
FatI	CATG	7 cut(s)	126, 326, 477, 663, 1125, 1350, 1402
FauI	CCCGC	5 cut(s)	453, 490, 510, 622, 1334
FbaI	TGATCA	1 cut(s)	919
FblI	GTMKAC	1 cut(s)	453
FokI	GGATG	5 cut(s)	412, 458, 613, 1066, 1362
FriOI	GRGCYC	2 cut(s)	653, 1176
FspBI	CTAG	6 cut(s)	158, 498, 524, 1074, 1422, 1542
FspI	TGCGCA	1 cut(s)	493
GlaI	GCGC	7 cut(s)	493, 672, 741, 779, 1282, 1314, 1486
HaeII	RGCGCY	2 cut(s)	674, 1284
HapII	CCGG	9 cut(s)	348, 369, 597, 603, 654, 798, 980, 1040, 1155
HhaI	GCGC	7 cut(s)	494, 673, 742, 780, 1283, 1315, 1487
Hin1I	GRCGYC	2 cut(s)	671, 1281
Hin1II	CATG	7 cut(s)	130, 330, 481, 667, 1129, 1354, 1406
Hin6I	GCGC	7 cut(s)	492, 671, 740, 778, 1281, 1313, 1485
HinP1I	GCGC	7 cut(s)	492, 671, 740, 778, 1281, 1313, 1485
HincII	GTYRAC	1 cut(s)	454
HindII	GTYRAC	1 cut(s)	454
HinfI	GANTC	3 cut(s)	1024, 1355, 1535
HpaII	CCGG	9 cut(s)	348, 369, 597, 603, 654, 798, 980, 1040, 1155
HphI	GGTGA	3 cut(s)	554, 929, 1088
Hpy166II	GTNNAC	3 cut(s)	140, 454, 1131
Hpy188I	TCNGA	5 cut(s)	355, 538, 731, 820, 1140
Hpy188III	TCNNGA	4 cut(s)	311, 383, 646, 941
Hpy8I	GTNNAC	3 cut(s)	140, 454, 1131
Hpy99I	CGWCG	5 cut(s)	458, 542, 679, 838, 841
HpyAV	CCTTC	6 cut(s)	113, 120, 572, 588, 777, 1475
HpyCH4III	ACNGT	5 cut(s)	137, 175, 337, 542, 1144
HpyCH4IV	ACGT	1 cut(s)	488
HpyCH4V	TGCA	5 cut(s)	116, 254, 326, 803, 1201
HpyF10VI	GCNNNNNNNGC	8 cut(s)	474, 491, 565, 574, 748, 775, 1319, 1378
HpyF3I	CTNAG	3 cut(s)	92, 644, 819
HpySE526I	ACGT	1 cut(s)	488
Hsp92I	GRCGYC	2 cut(s)	671, 1281
Hsp92II	CATG	7 cut(s)	130, 330, 481, 667, 1129, 1354, 1406
HspAI	GCGC	7 cut(s)	492, 671, 740, 778, 1281, 1313, 1485
KasI	GGCGCC	2 cut(s)	670, 1280
KroI	GCCGGC	1 cut(s)	1154
KroNI	GCCGGC	1 cut(s)	1156
Ksp22I	TGATCA	1 cut(s)	919
Kzo9I	GATC	7 cut(s)	4, 245, 303, 307, 343, 919, 1405
LmnI	GCTCC	9 cut(s)	135, 520, 564, 648, 656, 731, 766, 982, 1388
Lsp1109I	GCAGC	9 cut(s)	75, 83, 238, 310, 506, 724, 746, 787, 1384
LweI	GCATC	2 cut(s)	480, 1384
MaeI	CTAG	6 cut(s)	158, 498, 524, 1074, 1422, 1542
MaeII	ACGT	1 cut(s)	488
MaeIII	GTNAC	3 cut(s)	398, 934, 1148
MalI	GATC	7 cut(s)	6, 247, 305, 309, 345, 921, 1407
MbiI	CCGCTC	1 cut(s)	1391
MboI	GATC	7 cut(s)	4, 245, 303, 307, 343, 919, 1405
MboII	GAAGA	4 cut(s)	17, 22, 430, 1561
MfeI	CAATTG	2 cut(s)	752, 1247
MflI	RGATCY	2 cut(s)	4, 245
MhlI	GDGCHC	5 cut(s)	531, 653, 771, 1007, 1176
MlsI	TGGCCA	2 cut(s)	1191, 1242
MluNI	TGGCCA	2 cut(s)	1191, 1242
Mly113I	GGCGCC	2 cut(s)	671, 1281
MlyI	GAGTC	3 cut(s)	1033, 1364, 1544
MmeI	TCCRAC	5 cut(s)	561, 744, 876, 1163, 1500
Mox20I	TGGCCA	2 cut(s)	1191, 1242
MroNI	GCCGGC	1 cut(s)	1154
MroXI	GAANNNNTTC	2 cut(s)	370, 1582
MscI	TGGCCA	2 cut(s)	1191, 1242
MseI	TTAA	5 cut(s)	809, 1110, 1119, 1467, 1514
MslI	CAYNNNNRTG	1 cut(s)	476
Msp20I	TGGCCA	2 cut(s)	1191, 1242
MspA1I	CMGCKG	4 cut(s)	88, 251, 323, 737
MspI	CCGG	9 cut(s)	348, 369, 597, 603, 654, 798, 980, 1040, 1155
MspR9I	CCNGG	6 cut(s)	187, 348, 655, 798, 1239, 1385
MunI	CAATTG	2 cut(s)	752, 1247
MvaI	CCWGG	3 cut(s)	187, 1239, 1385
MvnI	CGCG	5 cut(s)	517, 698, 780, 1001, 1313
MwoI	GCNNNNNNNGC	8 cut(s)	474, 491, 565, 574, 748, 775, 1319, 1378
NaeI	GCCGGC	1 cut(s)	1156
NarI	GGCGCC	2 cut(s)	671, 1281
NciI	CCSGG	3 cut(s)	348, 655, 798
NcoI	CCATGG	1 cut(s)	1350
NdeII	GATC	7 cut(s)	4, 245, 303, 307, 343, 919, 1405
NgoMIV	GCCGGC	1 cut(s)	1154
NlaIII	CATG	7 cut(s)	130, 330, 481, 667, 1129, 1354, 1406
NmeAIII	GCCGAG	1 cut(s)	598
NsbI	TGCGCA	1 cut(s)	493
NspI	RCATGY	3 cut(s)	330, 481, 667
PaeI	GCATGC	2 cut(s)	330, 481
PcsI	WCGNNNNNNNCGW	1 cut(s)	833
PdiI	GCCGGC	1 cut(s)	1156
PdmI	GAANNNNTTC	2 cut(s)	370, 1582
PflMI	CCANNNNNTGG	2 cut(s)	555, 1249
PinAI	ACCGGT	1 cut(s)	368
PleI	GAGTC	3 cut(s)	1032, 1363, 1543
PluTI	GGCGCC	2 cut(s)	674, 1284
PmaCI	CACGTG	1 cut(s)	489
PmlI	CACGTG	1 cut(s)	489
PpsI	GAGTC	3 cut(s)	1032, 1363, 1543
Ppu21I	YACGTR	1 cut(s)	489
PshBI	ATTAAT	3 cut(s)	1110, 1119, 1467
PsiI	TTATAA	1 cut(s)	1592
Psp124BI	GAGCTC	1 cut(s)	653
Psp6I	CCWGG	3 cut(s)	185, 1237, 1383
PspCI	CACGTG	1 cut(s)	489
PspGI	CCWGG	3 cut(s)	185, 1237, 1383
PspOMI	GGGCCC	1 cut(s)	1172
PspPI	GGNCC	5 cut(s)	257, 463, 657, 1172, 1173
PstI	CTGCAG	1 cut(s)	256
PstNI	CAGNNNCTG	2 cut(s)	91, 323
PsuI	RGATCY	2 cut(s)	4, 245
PvuII	CAGCTG	2 cut(s)	88, 737
RsaI	GTAC	5 cut(s)	184, 760, 1255, 1428, 1443
RsaNI	GTAC	5 cut(s)	183, 759, 1254, 1427, 1442
RseI	CAYNNNNRTG	1 cut(s)	476
SacI	GAGCTC	1 cut(s)	653
SalI	GTCGAC	1 cut(s)	452
SaqAI	TTAA	5 cut(s)	809, 1110, 1119, 1467, 1514
Sau3AI	GATC	7 cut(s)	4, 245, 303, 307, 343, 919, 1405
Sau96I	GGNCC	5 cut(s)	257, 463, 657, 1172, 1173
ScaI	AGTACT	1 cut(s)	1428
SchI	GAGTC	3 cut(s)	1033, 1364, 1544
ScrFI	CCNGG	6 cut(s)	187, 348, 655, 798, 1239, 1385
SduI	GDGCHC	5 cut(s)	531, 653, 771, 1007, 1176
SfaNI	GCATC	2 cut(s)	480, 1384
SfcI	CTRYAG	2 cut(s)	171, 252
SfoI	GGCGCC	2 cut(s)	672, 1282
SinI	GGWCC	1 cut(s)	657
SmiMI	CAYNNNNRTG	1 cut(s)	476
SmlI	CTYRAG	2 cut(s)	685, 1275
SmoI	CTYRAG	2 cut(s)	685, 1275
SphI	GCATGC	2 cut(s)	330, 481
SspDI	GGCGCC	2 cut(s)	670, 1280
SspMI	CTAG	6 cut(s)	158, 498, 524, 1074, 1422, 1542
SstI	GAGCTC	1 cut(s)	653
StyD4I	CCNGG	6 cut(s)	185, 346, 653, 796, 1237, 1383
StyI	CCWWGG	3 cut(s)	196, 1084, 1350
TaaI	ACNGT	5 cut(s)	137, 175, 337, 542, 1144
TaiI	ACGT	1 cut(s)	491
TaqI	TCGA	8 cut(s)	281, 299, 306, 453, 552, 839, 942, 1168
TatI	WGTACW	1 cut(s)	1426
TauI	GCSGC	6 cut(s)	323, 468, 471, 593, 1286, 1313
Tru1I	TTAA	5 cut(s)	809, 1110, 1119, 1467, 1514
Tru9I	TTAA	5 cut(s)	809, 1110, 1119, 1467, 1514
TseI	GCWGC	9 cut(s)	88, 96, 251, 323, 494, 734, 737, 775, 1372
TspDTI	ATGAA	3 cut(s)	115, 1223, 1494
TspGWI	ACGGA	1 cut(s)	822
Van91I	CCANNNNNTGG	2 cut(s)	555, 1249
VpaK11BI	GGWCC	1 cut(s)	657
VspI	ATTAAT	3 cut(s)	1110, 1119, 1467
XagI	CCTNNNNNAGG	1 cut(s)	566
XapI	RAATTY	6 cut(s)	121, 850, 972, 1210, 1504, 1581
XceI	RCATGY	3 cut(s)	330, 481, 667
XcmI	CCANNNNNNNNNTGG	1 cut(s)	751
XmiI	GTMKAC	1 cut(s)	453
XmnI	GAANNNNTTC	2 cut(s)	370, 1582
XspI	CTAG	6 cut(s)	158, 498, 524, 1074, 1422, 1542
ZrmI	AGTACT	1 cut(s)	1428

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.