Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0004128

Physical Location & Seq

Genomic Coordinates Reverse (-)

16771514 .. 16778447

Gene Structure 6934 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g20610.12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGCCCATTTTACATTGCGACACATGTCGTTCATTTATATTTACTTATATCGTAACACATTACACACGACTTGCTAATCCACGTGTTAGTGATTGTTATGAGGACTTACTAGCGAGTGTTTTAAGTGCACTTTCACGGCATCGGAACACCCTCTCCTCCGTCAGCCGTCCTCCACTCCTCTTCCTCCCTTCACCGCCCAGCTCGGCCCACACTCCTCCTTCTTCTTCATTGGCAATTTGGCATTGTCAACAGCAACATCAATATTTGGTTTTGTTTATTTGGTGTAACTCAGGTCGCTTTGTTTCGAAAATGGACGCCACAATGCCCATCTGCAAGACTGTCACGCCAACTCCGGGCTTATTTTTTGGGAGAACTAGGGAGATCCGTAGTTCTCAATGTAGCTTTATGGTGGGAAATAAAGTCAACTTTTTAAGGCAGAGAGTTCAGGGTGCTCAAGTTAGTGTTAAATCCAGAAAGCATGGGGGAGCTCTTCATGCTACATGTCGTGCTGAAAAAATTCTGGTGGCAAATAGAGGGGAAATTGCTGTTCGCGTTATTCGAACAGCCCATGAGATGGGAATACCTTGTGTGGCTGTTTACTCAACAATAGACAAGGATGCACTTCATGTGAAATTGGCTGACGAATCAGTTTGTATTGGTGAAGCAGCAAGCAGTCAATCGTACTTAGTTGTTCCAAATGTTTTATCTGCTGCCATCAGTTGGAAATGTACAATGTTGCATCCAGGATATGGTTTCCTTTCTGAGAATGCATCATTTGTTGAAATGTGCAAAGAACATGGAATCAATTTTATTGGGCCTAAGCCCGAGAGCATCCGTGTCATGGGTGATAAATCAACTGCCAGAGACACAATGAAGAAAGCAGGTGTCCCAACTGTACCTGGAAGTGATGGATTACTACAGAGCACAGAGGAAGGAATCAGGCTTGCAGATGAGATTGGTTTTCCTGTAATGATCAAGGCCACAGCAGGAGGTGGAGGACGTGGCATGCGTCTTGCTAAAGAACCTGAGGAGTTTGTGAAGTTGTTGCAGCAAGCAAAGAGTGAGGCTGCAGCTGCTTTTGGAAATGATGGAGTTTATTTGGAAAAGTACATCCAAAATCCTAGACACATTGAGTTTCAGGTTCTTGCAGATAAATTTGGTAATGTTATTCACTTTGGAGAGCGGGATTGCAGCATCCAGAGAAGGAACCAAAAGCTTCTGGAAGAAGCACCTTCCCCTGCATTGACCCCAGAACTGCGGAAAGCTATGGGTGATGCAGCAGTTGCAGCAGCAGCATCTATTGGCTACATTGGTGTTGGAACCGTTGAATTCCTTTTGGACGAAAGAGGTTCCTTTTACTTCATGGAAATGAACACTCGGATTCAGGTTGAGCATCCTGTGACAGAAATGATTTCCTCTGTTGACTTGATTGAAGAACAAATTCGTGTGGCTATGGGTGAAAAACTCCGATACACGCAGGAAGATATAGTGCTCAGAGGACATTCAATTGAATGCCGTATCAATGCAGAAGATGCTTTTAAAGGATTCCGACCTGGGCCAGGAAGAATAACAGCCTACTTACCATCTGGAGGTCCCTTTGTTCGAATGGATAGCCATGTTTATCCTGATTATGTGGTTCCTCCAAACTATGATTCCCTTCTTGGAAAGCTTATTGTTTGGGCACCAACAAGAGAAAAGGCGATTGAGCGAATGAAGAGGGCTCTTGACGACACTGTTATAACAGGGGTTCCCACAACCATTGAATACCATAAACTTATCCTTGACGTAGAGGATTTCAAAAATGGCAAGGTTGATACTGCTTTTATTCCAAAGCATGAAGAGGAGCTACAAGCGGTAAGAAACTACCCCAACATTTGGTGCCCGCGGCCGCTGCCAAGAACTAGCTGGTGCATCTGCTTACATGGATGGCTCTCTAATTGCCACTATGTATCTGGTCTAGTCGACCACATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00061 ko00620 ko00640 ko00720 ko01100 ko01110 ko01120 ko01130 ko01200 ko01212 map00061 map00620 map00640 map00720 map01100 map01110 map01120 map01130 map01200 map01212

Pfam Domains

Protein Families

Biotin_carb_C Biotin_carb_N CPSase_L_D2

Protein Analysis

658

Amino Acids

72.96

Weight (kDa)

8.03

Isoelectric Point (pI)

42.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004128)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35360 AT5G35360 AT5G35360
fragaria_vesca	FvH4_4g06120 FvH4_4g06120
malus_domestica	MD01G1022300.v1.1 MD13G1233600.v1.1 MD15G1330100.v1.1 MD16G1238600.v1.1
prunus_persica	Prupe.1G064800_v2.0.a1 Prupe.1G064800_v2.0.a1 Prupe.1G064800_v2.0.a1 Prupe.1G064800_v2.0.a1 Prupe.1G064800_v2.0.a1 Prupe.1G064800_v2.0.a1 Prupe.1G064800_v2.0.a1 Prupe.4G259200_v2.0.a1 Prupe.4G259200_v2.0.a1
pyrus_communis	pycom01g04970 pycom13g20610 pycom15g29530 pycom16g19960
rosa_chinensis	RchiOBHm_Chr4g0397731
rosa_laevigata	RLG00000009418 RLG00000024585
rosa_multiflora	Rmu_sc0004527.1_g000008
rosa_roxburghii	Rroxscaffold_5G00342540
rosa_rugosa	Rorug04G0003500.1 Rorug04G0003600
rosa_samantha	Rh4AG080200 Rh4BG077900 Rh4DG073300
rosa_wichuraiana	Rw4G006570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1739
AarI	CACCTGC	1 cut(s)	872
Acc36I	ACCTGC	1 cut(s)	872
AccB1I	GGYRCC	2 cut(s)	1681, 1878
AccB7I	CCANNNNNTGG	4 cut(s)	574, 720, 749, 1875
AccBSI	CCGCTC	1 cut(s)	1183
AccI	GTMKAC	1 cut(s)	1962
AccII	CGCG	2 cut(s)	552, 1885
AciI	CCGC	7 cut(s)	194, 1183, 1258, 1853, 1883, 1885, 1889
AclWI	GGATC	1 cut(s)	376
AcoI	YGGCCR	1 cut(s)	1886
AcsI	RAATTY	4 cut(s)	516, 1154, 1328, 1440
AcvI	CACGTG	1 cut(s)	83
AcyI	GRCGYC	1 cut(s)	315
AfaI	GTAC	4 cut(s)	683, 730, 897, 1109
AfiI	CCNNNNNNNGG	8 cut(s)	353, 574, 720, 749, 841, 1559, 1589, 1875
AflIII	ACRYGT	3 cut(s)	23, 82, 500
AgsI	TTSAA	7 cut(s)	782, 1328, 1433, 1506, 1511, 1763, 1798
AjiI	CACGTC	1 cut(s)	1001
AjnI	CCWGG	4 cut(s)	742, 898, 1552, 1558
AjuI	GAANNNNNNNTTGG	2 cut(s)	1636, 1668
AloI	GAACNNNNNNTCC	2 cut(s)	137, 169
AluBI	AGCT	9 cut(s)	201, 402, 488, 1073, 1216, 1265, 1669, 1846, 1905
AluI	AGCT	9 cut(s)	201, 402, 488, 1073, 1216, 1265, 1669, 1846, 1905
Alw21I	GWGCWC	5 cut(s)	130, 454, 490, 926, 1494
Alw26I	GTCTC	1 cut(s)	858
Alw44I	GTGCAC	1 cut(s)	126
AlwI	GGATC	1 cut(s)	376
Ama87I	CYCGRG	1 cut(s)	824
AoxI	GGCC	5 cut(s)	204, 815, 978, 1556, 1886
ApaLI	GTGCAC	1 cut(s)	126
ApoI	RAATTY	4 cut(s)	516, 1154, 1328, 1440
Asp700I	GAANNNNTTC	2 cut(s)	516, 1440
AspS9I	GGNCC	4 cut(s)	205, 815, 1556, 1592
AsuC2I	CCSGG	1 cut(s)	354
AsuHPI	GGTGA	5 cut(s)	183, 671, 857, 1283, 1469
AsuII	TTCGAA	3 cut(s)	305, 559, 1603
AvaI	CYCGRG	1 cut(s)	824
AvaII	GGWCC	1 cut(s)	1592
AxyI	CCTNAGG	1 cut(s)	1026
BaeGI	GKGCMC	3 cut(s)	130, 1684, 1883
BanI	GGYRCC	2 cut(s)	1681, 1878
BanII	GRGCYC	2 cut(s)	490, 1723
BarI	GAAGNNNNNNTAC	2 cut(s)	1830, 1862
BbrPI	CACGTG	1 cut(s)	83
Bbv12I	GWGCWC	5 cut(s)	130, 454, 490, 926, 1494
BccI	CCATC	7 cut(s)	335, 568, 722, 902, 1082, 1591, 1920
BceAI	ACGGC	3 cut(s)	150, 152, 1500
BciT130I	CCWGG	4 cut(s)	744, 900, 1554, 1560
BclI	TGATCA	1 cut(s)	972
BcnI	CCSGG	1 cut(s)	354
BcoDI	GTCTC	1 cut(s)	858
BfaI	CTAG	5 cut(s)	110, 375, 1122, 1902, 1958
BfmI	CTRYAG	2 cut(s)	917, 1068
BfuAI	ACCTGC	1 cut(s)	872
Bme1390I	CCNGG	5 cut(s)	354, 744, 900, 1554, 1560
Bme18I	GGWCC	1 cut(s)	1592
BmeT110I	CYCGRG	1 cut(s)	824
BmgBI	CACGTC	1 cut(s)	1001
BmgT120I	GGNCC	4 cut(s)	205, 815, 1556, 1592
BmiI	GGNNCC	8 cut(s)	1208, 1321, 1351, 1594, 1638, 1683, 1749, 1880
BmrFI	CCNGG	5 cut(s)	354, 744, 900, 1554, 1560
BoxI	GACNNNNGTC	1 cut(s)	24
BpmI	CTGGAG	1 cut(s)	1608
Bpu10I	CCTNAGC	1 cut(s)	819
Bpu14I	TTCGAA	3 cut(s)	305, 559, 1603
BpuEI	CTTGAG	1 cut(s)	438
BpuMI	CCSGG	1 cut(s)	354
BsaAI	YACGTR	1 cut(s)	83
BsaHI	GRCGYC	1 cut(s)	315
BsaJI	CCNNGG	2 cut(s)	1553, 1883
BsaXI	ACNNNNNCTCC	4 cut(s)	137, 167, 334, 364
Bsc4I	CCNNNNNNNGG	8 cut(s)	353, 574, 720, 749, 841, 1559, 1589, 1875
Bse21I	CCTNAGG	1 cut(s)	1026
Bse3DI	GCAATG	1 cut(s)	13
BseBI	CCWGG	4 cut(s)	744, 900, 1554, 1560
BseDI	CCNNGG	2 cut(s)	1553, 1883
BseGI	GGATG	7 cut(s)	622, 739, 831, 1110, 1194, 1393, 1931
BseLI	CCNNNNNNNGG	8 cut(s)	353, 574, 720, 749, 841, 1559, 1589, 1875
BseMI	GCAATG	1 cut(s)	13
BseMII	CTCAG	4 cut(s)	303, 753, 1017, 1507
BseRI	GAGGAG	5 cut(s)	145, 167, 204, 1043, 1856
BseSI	GKGCMC	3 cut(s)	130, 1684, 1883
BseX3I	CGGCCG	1 cut(s)	1886
BseYI	CCCAGC	1 cut(s)	197
Bsh1236I	CGCG	2 cut(s)	552, 1885
Bsh1285I	CGRYCG	1 cut(s)	1889
BshFI	GGCC	5 cut(s)	206, 817, 980, 1558, 1888
BshNI	GGYRCC	2 cut(s)	1681, 1878
BsiEI	CGRYCG	1 cut(s)	1889
BsiHKAI	GWGCWC	5 cut(s)	130, 454, 490, 926, 1494
BsiHKCI	CYCGRG	1 cut(s)	824
BsiSI	CCGG	1 cut(s)	353
BslFI	GGGAC	2 cut(s)	872, 1578
BslI	CCNNNNNNNGG	8 cut(s)	353, 574, 720, 749, 841, 1559, 1589, 1875
BsmAI	GTCTC	1 cut(s)	858
BsmFI	GGGAC	2 cut(s)	872, 1578
BsmI	GAATGC	2 cut(s)	772, 1517
BsnI	GGCC	5 cut(s)	206, 817, 980, 1558, 1888
BsoBI	CYCGRG	1 cut(s)	824
Bsp119I	TTCGAA	3 cut(s)	305, 559, 1603
Bsp1286I	GDGCHC	8 cut(s)	130, 454, 490, 926, 1494, 1684, 1723, 1883
Bsp1407I	TGTACA	1 cut(s)	728
Bsp143I	GATC	2 cut(s)	381, 972
BspACI	CCGC	7 cut(s)	194, 1183, 1258, 1853, 1883, 1885, 1889
BspANI	GGCC	5 cut(s)	206, 817, 980, 1558, 1888
BspCNI	CTCAG	4 cut(s)	302, 754, 1018, 1506
BspFNI	CGCG	2 cut(s)	552, 1885
BspLI	GGNNCC	8 cut(s)	1208, 1321, 1351, 1594, 1638, 1683, 1749, 1880
BspMAI	CTGCAG	1 cut(s)	1072
BspMI	ACCTGC	1 cut(s)	872
BspPI	GGATC	1 cut(s)	376
BspQI	GCTCTTC	1 cut(s)	495
BspT104I	TTCGAA	3 cut(s)	305, 559, 1603
BspT107I	GGYRCC	2 cut(s)	1681, 1878
BsrBI	CCGCTC	1 cut(s)	1183
BsrDI	GCAATG	1 cut(s)	13
BsrGI	TGTACA	1 cut(s)	728
BssECI	CCNNGG	2 cut(s)	1553, 1883
BssMI	GATC	2 cut(s)	381, 972
BssNI	GRCGYC	1 cut(s)	315
Bst2UI	CCWGG	4 cut(s)	744, 900, 1554, 1560
Bst4CI	ACNGT	4 cut(s)	340, 895, 1324, 1735
Bst6I	CTCTTC	4 cut(s)	185, 495, 1709, 1833
BstACI	GRCGYC	1 cut(s)	315
BstAPI	GCANNNNNTGC	2 cut(s)	1283, 1532
BstAUI	TGTACA	1 cut(s)	728
BstBAI	YACGTR	1 cut(s)	83
BstBI	TTCGAA	3 cut(s)	305, 559, 1603
BstC8I	GCNNGC	5 cut(s)	670, 945, 1007, 1053, 1883
BstDEI	CTNAG	6 cut(s)	289, 685, 762, 819, 1026, 1493
BstDSI	CCRYGG	1 cut(s)	1883
BstENI	CCTNNNNNAGG	1 cut(s)	1557
BstF5I	GGATG	7 cut(s)	622, 739, 831, 1110, 1194, 1393, 1931
BstFNI	CGCG	2 cut(s)	552, 1885
BstKTI	GATC	2 cut(s)	384, 975
BstMAI	GTCTC	1 cut(s)	858
BstMBI	GATC	2 cut(s)	381, 972
BstMCI	CGRYCG	1 cut(s)	1889
BstMWI	GCNNNNNNNGC	7 cut(s)	494, 1073, 1283, 1286, 1292, 1532, 1891
BstNI	CCWGG	4 cut(s)	744, 900, 1554, 1560
BstNSI	RCATGY	3 cut(s)	27, 504, 1009
BstPAI	GACNNNNGTC	1 cut(s)	24
BstSCI	CCNGG	5 cut(s)	352, 742, 898, 1552, 1558
BstSFI	CTRYAG	2 cut(s)	917, 1068
BstSLI	GKGCMC	3 cut(s)	130, 1684, 1883
BstUI	CGCG	2 cut(s)	552, 1885
BstX2I	RGATCY	1 cut(s)	381
BstYI	RGATCY	1 cut(s)	381
BstZI	CGGCCG	1 cut(s)	1886
Bsu36I	CCTNAGG	1 cut(s)	1026
BsuRI	GGCC	5 cut(s)	206, 817, 980, 1558, 1888
BtgI	CCRYGG	1 cut(s)	1883
BtrI	CACGTC	1 cut(s)	1001
BtsCI	GGATG	7 cut(s)	622, 739, 831, 1110, 1194, 1393, 1931
BtsIMutI	CAGTG	1 cut(s)	1731
BveI	ACCTGC	1 cut(s)	872
Cac8I	GCNNGC	5 cut(s)	670, 945, 1007, 1053, 1883
CciNI	GCGGCCGC	1 cut(s)	1886
Cfr13I	GGNCC	4 cut(s)	205, 815, 1556, 1592
Cfr42I	CCGCGG	1 cut(s)	1886
CseI	GACGC	2 cut(s)	323, 998
Csp6I	GTAC	4 cut(s)	682, 729, 896, 1108
CspCI	CAANNNNNGTGG	2 cut(s)	1741, 1776
CviQI	GTAC	4 cut(s)	682, 729, 896, 1108
DdeI	CTNAG	6 cut(s)	289, 685, 762, 819, 1026, 1493
DpnI	GATC	2 cut(s)	383, 974
DpnII	GATC	2 cut(s)	381, 972
DraI	TTTAAA	1 cut(s)	1540
EaeI	YGGCCR	1 cut(s)	1886
EagI	CGGCCG	1 cut(s)	1886
Eam1104I	CTCTTC	4 cut(s)	185, 495, 1709, 1833
EarI	CTCTTC	4 cut(s)	185, 495, 1709, 1833
Ecl136II	GAGCTC	1 cut(s)	488
EclXI	CGGCCG	1 cut(s)	1886
Eco24I	GRGCYC	2 cut(s)	490, 1723
Eco47I	GGWCC	1 cut(s)	1592
Eco52I	CGGCCG	1 cut(s)	1886
Eco53kI	GAGCTC	1 cut(s)	488
Eco72I	CACGTG	1 cut(s)	83
Eco81I	CCTNAGG	1 cut(s)	1026
Eco88I	CYCGRG	1 cut(s)	824
EcoICRI	GAGCTC	1 cut(s)	488
EcoNI	CCTNNNNNAGG	1 cut(s)	1557
EcoO109I	RGGNCCY	1 cut(s)	1592
EcoRI	GAATTC	1 cut(s)	1328
EcoRII	CCWGG	4 cut(s)	742, 898, 1552, 1558
EcoT22I	ATGCAT	1 cut(s)	772
EcoT38I	GRGCYC	2 cut(s)	490, 1723
FaqI	GGGAC	2 cut(s)	872, 1578
FauI	CCCGC	2 cut(s)	1176, 1890
FbaI	TGATCA	1 cut(s)	972
FblI	GTMKAC	1 cut(s)	1962
FokI	GGATG	7 cut(s)	629, 726, 818, 1097, 1181, 1380, 1938
FriOI	GRGCYC	2 cut(s)	490, 1723
FspBI	CTAG	5 cut(s)	110, 375, 1122, 1902, 1958
GsaI	CCCAGC	1 cut(s)	201
GsuI	CTGGAG	1 cut(s)	1608
HaeIII	GGCC	5 cut(s)	206, 817, 980, 1558, 1888
HapII	CCGG	1 cut(s)	353
HgaI	GACGC	2 cut(s)	323, 998
Hin1I	GRCGYC	1 cut(s)	315
HincII	GTYRAC	4 cut(s)	248, 424, 1423, 1963
HindII	GTYRAC	4 cut(s)	248, 424, 1423, 1963
HindIII	AAGCTT	2 cut(s)	1214, 1667
HinfI	GANTC	6 cut(s)	644, 801, 936, 1381, 1545, 1652
HpaII	CCGG	1 cut(s)	353
HphI	GGTGA	5 cut(s)	183, 671, 857, 1283, 1469
Hpy166II	GTNNAC	6 cut(s)	128, 248, 424, 598, 1423, 1963
Hpy188I	TCNGA	6 cut(s)	144, 763, 1380, 1469, 1496, 1550
Hpy188III	TCNNGA	6 cut(s)	471, 1198, 1220, 1587, 1625, 1724
Hpy8I	GTNNAC	6 cut(s)	128, 248, 424, 598, 1423, 1963
HpyAV	CCTTC	6 cut(s)	198, 228, 926, 1197, 1242, 1667
HpyCH4III	ACNGT	4 cut(s)	340, 895, 1324, 1735
HpyCH4IV	ACGT	3 cut(s)	82, 1000, 1785
HpyF10VI	GCNNNNNNNGC	7 cut(s)	494, 1073, 1283, 1286, 1292, 1532, 1891
HpyF3I	CTNAG	6 cut(s)	289, 685, 762, 819, 1026, 1493
HpySE526I	ACGT	3 cut(s)	82, 1000, 1785
Hsp92I	GRCGYC	1 cut(s)	315
Ksp22I	TGATCA	1 cut(s)	972
KspI	CCGCGG	1 cut(s)	1886
Kzo9I	GATC	2 cut(s)	381, 972
LguI	GCTCTTC	1 cut(s)	495
LmnI	GCTCC	2 cut(s)	485, 1843
MaeI	CTAG	5 cut(s)	110, 375, 1122, 1902, 1958
MaeII	ACGT	3 cut(s)	82, 1000, 1785
MaeIII	GTNAC	4 cut(s)	52, 284, 340, 1399
MalI	GATC	2 cut(s)	383, 974
MbiI	CCGCTC	1 cut(s)	1183
MboI	GATC	2 cut(s)	381, 972
MfeI	CAATTG	1 cut(s)	1506
MflI	RGATCY	1 cut(s)	381
MhlI	GDGCHC	8 cut(s)	130, 454, 490, 926, 1494, 1684, 1723, 1883
MmeI	TCCRAC	3 cut(s)	701, 1297, 1573
Mph1103I	ATGCAT	1 cut(s)	772
MroXI	GAANNNNTTC	2 cut(s)	516, 1440
MseI	TTAA	5 cut(s)	122, 431, 465, 1539, 1972
MslI	CAYNNNNRTG	1 cut(s)	1367
MspA1I	CMGCKG	3 cut(s)	1073, 1885, 1891
MspI	CCGG	1 cut(s)	353
MspR9I	CCNGG	5 cut(s)	354, 744, 900, 1554, 1560
MunI	CAATTG	1 cut(s)	1506
Mva1269I	GAATGC	2 cut(s)	772, 1517
MvaI	CCWGG	4 cut(s)	744, 900, 1554, 1560
MvnI	CGCG	2 cut(s)	552, 1885
MwoI	GCNNNNNNNGC	7 cut(s)	494, 1073, 1283, 1286, 1292, 1532, 1891
NciI	CCSGG	1 cut(s)	354
NdeII	GATC	2 cut(s)	381, 972
NlaIV	GGNNCC	8 cut(s)	1208, 1321, 1351, 1594, 1638, 1683, 1749, 1880
NmeAIII	GCCGAG	1 cut(s)	182
NmuCI	GTSAC	2 cut(s)	340, 1399
NotI	GCGGCCGC	1 cut(s)	1886
NsiI	ATGCAT	1 cut(s)	772
NspI	RCATGY	3 cut(s)	27, 504, 1009
NspV	TTCGAA	3 cut(s)	305, 559, 1603
PaeI	GCATGC	1 cut(s)	1009
PaqCI	CACCTGC	1 cut(s)	872
PciI	ACATGT	2 cut(s)	23, 500
PciSI	GCTCTTC	1 cut(s)	495
PcsI	WCGNNNNNNNCGW	2 cut(s)	556, 1006
PctI	GAATGC	2 cut(s)	772, 1517
PdmI	GAANNNNTTC	2 cut(s)	516, 1440
PfeI	GAWTC	6 cut(s)	644, 801, 936, 1381, 1545, 1652
PflMI	CCANNNNNTGG	4 cut(s)	574, 720, 749, 1875
PfoI	TCCNGGA	1 cut(s)	742
PmaCI	CACGTG	1 cut(s)	83
PmlI	CACGTG	1 cut(s)	83
Ppu21I	YACGTR	1 cut(s)	83
PpuMI	RGGWCCY	1 cut(s)	1592
PscI	ACATGT	2 cut(s)	23, 500
PshAI	GACNNNNGTC	1 cut(s)	24
PsiI	TTATAA	1 cut(s)	1739
Psp124BI	GAGCTC	1 cut(s)	490
Psp5II	RGGWCCY	1 cut(s)	1592
Psp6I	CCWGG	4 cut(s)	742, 898, 1552, 1558
PspCI	CACGTG	1 cut(s)	83
PspFI	CCCAGC	1 cut(s)	197
PspGI	CCWGG	4 cut(s)	742, 898, 1552, 1558
PspN4I	GGNNCC	8 cut(s)	1208, 1321, 1351, 1594, 1638, 1683, 1749, 1880
PspPI	GGNCC	4 cut(s)	205, 815, 1556, 1592
PspPPI	RGGWCCY	1 cut(s)	1592
PstI	CTGCAG	1 cut(s)	1072
PsuI	RGATCY	1 cut(s)	381
PvuII	CAGCTG	1 cut(s)	1073
RsaI	GTAC	4 cut(s)	683, 730, 897, 1109
RsaNI	GTAC	4 cut(s)	682, 729, 896, 1108
RseI	CAYNNNNRTG	1 cut(s)	1367
SacI	GAGCTC	1 cut(s)	490
SacII	CCGCGG	1 cut(s)	1886
SalI	GTCGAC	1 cut(s)	1961
SapI	GCTCTTC	1 cut(s)	495
SaqAI	TTAA	5 cut(s)	122, 431, 465, 1539, 1972
Sau3AI	GATC	2 cut(s)	381, 972
Sau96I	GGNCC	4 cut(s)	205, 815, 1556, 1592
ScrFI	CCNGG	5 cut(s)	354, 744, 900, 1554, 1560
SduI	GDGCHC	8 cut(s)	130, 454, 490, 926, 1494, 1684, 1723, 1883
SfcI	CTRYAG	2 cut(s)	917, 1068
Sfr303I	CCGCGG	1 cut(s)	1886
SfuI	TTCGAA	3 cut(s)	305, 559, 1603
SgrBI	CCGCGG	1 cut(s)	1886
SinI	GGWCC	1 cut(s)	1592
SmiMI	CAYNNNNRTG	1 cut(s)	1367
SmlI	CTYRAG	1 cut(s)	453
SmoI	CTYRAG	1 cut(s)	453
SphI	GCATGC	1 cut(s)	1009
SsiI	CCGC	7 cut(s)	194, 1183, 1258, 1853, 1883, 1885, 1889
SspI	AATATT	1 cut(s)	263
SspMI	CTAG	5 cut(s)	110, 375, 1122, 1902, 1958
SstI	GAGCTC	1 cut(s)	490
StyD4I	CCNGG	5 cut(s)	352, 742, 898, 1552, 1558
TaaI	ACNGT	4 cut(s)	340, 895, 1324, 1735
TaiI	ACGT	3 cut(s)	85, 1003, 1788
TaqI	TCGA	4 cut(s)	305, 559, 1603, 1962
TatI	WGTACW	2 cut(s)	728, 1107
TauI	GCSGC	2 cut(s)	1888, 1891
TfiI	GAWTC	6 cut(s)	644, 801, 936, 1381, 1545, 1652
Tru1I	TTAA	5 cut(s)	122, 431, 465, 1539, 1972
Tru9I	TTAA	5 cut(s)	122, 431, 465, 1539, 1972
TscAI	CASTG	1 cut(s)	1738
TseFI	GTSAC	2 cut(s)	340, 1399
Tsp45I	GTSAC	2 cut(s)	340, 1399
TspDTI	ATGAA	9 cut(s)	21, 216, 482, 614, 887, 1351, 1385, 1727, 1851
TspGWI	ACGGA	3 cut(s)	148, 374, 824
TspRI	CASTG	1 cut(s)	1738
Van91I	CCANNNNNTGG	4 cut(s)	574, 720, 749, 1875
VneI	GTGCAC	1 cut(s)	126
VpaK11BI	GGWCC	1 cut(s)	1592
XagI	CCTNNNNNAGG	1 cut(s)	1557
XapI	RAATTY	4 cut(s)	516, 1154, 1328, 1440
XceI	RCATGY	3 cut(s)	27, 504, 1009
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1902, 1949
XmiI	GTMKAC	1 cut(s)	1962
XmnI	GAANNNNTTC	2 cut(s)	516, 1440
XspI	CTAG	5 cut(s)	110, 375, 1122, 1902, 1958
Zsp2I	ATGCAT	1 cut(s)	772

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.