Rmu_sc0004527.1_g000008

Biotin carboxylase 1

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004527.1
Physical Location & Seq
Forward (+)
51754 .. 57041
5288 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004527.1_g000008.1.cds

Sequence Viewer

Length: 1590 bp
atgcccatttgcaagactgttactccaactccgcgcttattttttgggaaaactggagagatcaggagttcccaatgtagctttatggtgggaaataaagttagctttttgaggcagagagctcagggcgctcagattagttatagatcgaggaagcacgctggagctctccatgctacatgtcttgctgataaaatcctggtggcaaacagaggagaaattgccgttcgtgttattcgcacggcgcatgagatgggcataccctgtgtggctgtttactcaacaatagacaaggatgcacttcatgtcaaattggctgatgaatcagtttgtattggtgaagcagcaagcagtcaatcgtacctagtggttccaaatgttttatctgctgccatcagtcgtaaatgtacaatgcttcatcctggatatggtttcctgtctgagaatgcatcttttgttgaaatgtgcaaagaacatggaatcaactttattggtcctaagcccgaaagtatccgtattatgggtgataaagcgactgccagagaaacaatgaagcaagcaggtgttccaactgtaccaggaagtgatggattactacagagcacagaggaaggaatcaagcttgccgatgagattggttatcctgttatgatcaaggcaacagcaggtggtggaggacgtggtatgcgtcttgctaaagagcctgaagagtttgtaaagttgctacaggcagcaaagagcgaggctgcagctgcttttggaaatgatggagtttatttggaaaagtatgtcgtgaatcctagacacattgaatttcaggttcttgcagataagtatggtaatgttgttcactttggagagcgtgattgtagcatccagagaaggaaccaaaagctgttagaagaagcaccctctcctgcattgaccccagaattgcgaaaagccatgggtgatgcagcagttgctgccgcagcatctattggttatattggtgttggaaccattgagttccttttggacgaaagaggttccttttacttcatggaaatgaacactaggattcaggttgaacatcctgtgacagaaatgatttcctctgttgacttgattgaagaacaaattcgtgttgctatgggagaaaaactccgatacacacaggatgatatcgtgctcagagggcattcaattgaatgtcgtatcaatgcagaagatgcttttaaaggattccgacctgggccaggtagaataacagcttacttacccgccggaggtccatttgttagaatggatagtcatgtttatcctgattatgtggttcctccaaactatgattcccttcttggaaagcttattgtttgggcaccaacaagagaaaaggcaattgatcggatgaaaagagctcttaacgacactattataacaggggttcctacaactattgaatatcataagctcatcctggagatagacgatttcaaaaatgggaaggttgatactgcttttattcccaagcatgaagaggagctagcagcgccccaacaagtgttgcctgcattcccacccaaagaactagctagtgcaagtacgtag
Functional Annotation

Protein Analysis

529

Amino Acids

57.91

Weight (kDa)

6.69

Isoelectric Point (pI)

37.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1418
AarI CACCTGC 2 cut(s) 551, 656
Acc36I ACCTGC 2 cut(s) 551, 656
AccB1I GGYRCC 1 cut(s) 1360
AccII CGCG 1 cut(s) 34
AciI CCGC 3 cut(s) 32, 969, 1263
AcsI RAATTY 2 cut(s) 812, 1119
AcuI CTGAAG 1 cut(s) 726
AfaI GTAC 4 cut(s) 362, 409, 576, 1585
AfiI CCNNNNNNNGG 4 cut(s) 428, 520, 1238, 1268
AflIII ACRYGT 1 cut(s) 179
AgsI TTSAA 8 cut(s) 461, 812, 1070, 1112, 1185, 1190, 1442, 1477
AjiI CACGTC 1 cut(s) 680
AjnI CCWGG 6 cut(s) 198, 421, 577, 1231, 1237, 1458
AjuI GAANNNNNNNTTGG 2 cut(s) 1315, 1347
Alw21I GWGCWC 5 cut(s) 124, 169, 605, 1173, 1402
AlwNI CAGNNNCTG 1 cut(s) 965
AoxI GGCC 1 cut(s) 1235
ApoI RAATTY 2 cut(s) 812, 1119
Asp700I GAANNNNTTC 1 cut(s) 1119
AspLEI GCGC 4 cut(s) 36, 131, 247, 1534
AspS9I GGNCC 3 cut(s) 494, 1235, 1271
AsuHPI GGTGA 3 cut(s) 350, 536, 962
AsuNHI GCTAGC 1 cut(s) 1525
AvaII GGWCC 2 cut(s) 494, 1271
BaeGI GKGCMC 1 cut(s) 1363
BanI GGYRCC 1 cut(s) 1360
BanII GRGCYC 3 cut(s) 124, 169, 1402
Bbv12I GWGCWC 5 cut(s) 124, 169, 605, 1173, 1402
BccI CCATC 4 cut(s) 247, 401, 581, 761
BceAI ACGGC 2 cut(s) 209, 258
BciT130I CCWGG 6 cut(s) 200, 423, 579, 1233, 1239, 1460
BciVI GTATCC 1 cut(s) 521
BclI TGATCA 1 cut(s) 651
BfaI CTAG 6 cut(s) 365, 801, 1056, 1526, 1571, 1575
BfmI CTRYAG 3 cut(s) 596, 725, 747
BfoI RGCGCY 2 cut(s) 132, 1535
BfuAI ACCTGC 2 cut(s) 551, 656
BfuI GTATCC 1 cut(s) 521
Bme1390I CCNGG 6 cut(s) 200, 423, 579, 1233, 1239, 1460
Bme18I GGWCC 2 cut(s) 494, 1271
BmgBI CACGTC 1 cut(s) 680
BmgT120I GGNCC 3 cut(s) 494, 1235, 1271
BmiI GGNNCC 7 cut(s) 372, 887, 1000, 1030, 1317, 1362, 1428
BmrFI CCNGG 6 cut(s) 200, 423, 579, 1233, 1239, 1460
BmsI GCATC 6 cut(s) 286, 458, 882, 943, 983, 1201
BmtI GCTAGC 1 cut(s) 1529
BplI GAGNNNNNCTC 2 cut(s) 1128, 1160
BpmI CTGGAG 3 cut(s) 75, 183, 1481
Bpu10I CCTNAGC 2 cut(s) 123, 498
BsaAI YACGTR 1 cut(s) 1587
BsaJI CCNNGG 2 cut(s) 945, 1232
BsaXI ACNNNNNCTCC 4 cut(s) 7, 13, 37, 43
Bsc4I CCNNNNNNNGG 4 cut(s) 428, 520, 1238, 1268
Bse1I ACTGG 1 cut(s) 58
BseBI CCWGG 6 cut(s) 200, 423, 579, 1233, 1239, 1460
BseDI CCNNGG 2 cut(s) 945, 1232
BseGI GGATG 7 cut(s) 301, 418, 873, 1072, 1165, 1395, 1455
BseLI CCNNNNNNNGG 4 cut(s) 428, 520, 1238, 1268
BseMII CTCAG 4 cut(s) 137, 146, 432, 1186
BseNI ACTGG 1 cut(s) 58
BseRI GAGGAG 2 cut(s) 228, 1535
BseSI GKGCMC 1 cut(s) 1363
Bsh1236I CGCG 1 cut(s) 34
BshFI GGCC 1 cut(s) 1237
BshNI GGYRCC 1 cut(s) 1360
BsiHKAI GWGCWC 5 cut(s) 124, 169, 605, 1173, 1402
BsiSI CCGG 1 cut(s) 1266
BslI CCNNNNNNNGG 4 cut(s) 428, 520, 1238, 1268
BsmI GAATGC 3 cut(s) 451, 1180, 1553
BsnI GGCC 1 cut(s) 1237
Bsp1286I GDGCHC 6 cut(s) 124, 169, 605, 1173, 1363, 1402
Bsp1407I TGTACA 1 cut(s) 407
Bsp143I GATC 4 cut(s) 60, 146, 651, 1384
Bsp19I CCATGG 1 cut(s) 945
BspACI CCGC 3 cut(s) 32, 969, 1263
BspANI GGCC 1 cut(s) 1237
BspCNI CTCAG 4 cut(s) 136, 145, 433, 1185
BspFNI CGCG 1 cut(s) 34
BspLI GGNNCC 7 cut(s) 372, 887, 1000, 1030, 1317, 1362, 1428
BspMAI CTGCAG 1 cut(s) 751
BspMI ACCTGC 2 cut(s) 551, 656
BspOI GCTAGC 1 cut(s) 1529
BspT107I GGYRCC 1 cut(s) 1360
BsrGI TGTACA 1 cut(s) 407
BsrI ACTGG 1 cut(s) 58
BssECI CCNNGG 2 cut(s) 945, 1232
BssMI GATC 4 cut(s) 60, 146, 651, 1384
BssT1I CCWWGG 1 cut(s) 945
Bst2UI CCWGG 6 cut(s) 200, 423, 579, 1233, 1239, 1460
Bst4CI ACNGT 2 cut(s) 19, 574
Bst6I CTCTTC 2 cut(s) 702, 1512
BstAPI GCANNNNNTGC 3 cut(s) 962, 965, 1211
BstAUI TGTACA 1 cut(s) 407
BstBAI YACGTR 1 cut(s) 1587
BstC8I GCNNGC 6 cut(s) 159, 349, 558, 624, 1527, 1551
BstDEI CTNAG 5 cut(s) 123, 132, 441, 498, 1172
BstDSI CCRYGG 1 cut(s) 945
BstENI CCTNNNNNAGG 1 cut(s) 1236
BstF5I GGATG 7 cut(s) 301, 418, 873, 1072, 1165, 1395, 1455
BstFNI CGCG 1 cut(s) 34
BstH2I RGCGCY 2 cut(s) 132, 1535
BstHHI GCGC 4 cut(s) 36, 131, 247, 1534
BstKTI GATC 4 cut(s) 63, 149, 654, 1387
BstMBI GATC 4 cut(s) 60, 146, 651, 1384
BstMWI GCNNNNNNNGC 9 cut(s) 128, 173, 752, 962, 965, 971, 1177, 1211, 1531
BstNI CCWGG 6 cut(s) 200, 423, 579, 1233, 1239, 1460
BstNSI RCATGY 1 cut(s) 183
BstSCI CCNGG 6 cut(s) 198, 421, 577, 1231, 1237, 1458
BstSFI CTRYAG 3 cut(s) 596, 725, 747
BstSLI GKGCMC 1 cut(s) 1363
BstSNI TACGTA 1 cut(s) 1587
BstUI CGCG 1 cut(s) 34
BsuI GTATCC 1 cut(s) 521
BsuRI GGCC 1 cut(s) 1237
BtgI CCRYGG 1 cut(s) 945
BtrI CACGTC 1 cut(s) 680
BtsCI GGATG 7 cut(s) 301, 418, 873, 1072, 1165, 1395, 1455
BveI ACCTGC 2 cut(s) 551, 656
Cac8I GCNNGC 6 cut(s) 159, 349, 558, 624, 1527, 1551
CaiI CAGNNNCTG 1 cut(s) 965
CfoI GCGC 4 cut(s) 36, 131, 247, 1534
Cfr13I GGNCC 3 cut(s) 494, 1235, 1271
CseI GACGC 1 cut(s) 677
Csp6I GTAC 4 cut(s) 361, 408, 575, 1584
CviAII CATG 9 cut(s) 173, 180, 248, 305, 476, 946, 1042, 1295, 1514
CviQI GTAC 4 cut(s) 361, 408, 575, 1584
DdeI CTNAG 5 cut(s) 123, 132, 441, 498, 1172
DpnI GATC 4 cut(s) 62, 148, 653, 1386
DpnII GATC 4 cut(s) 60, 146, 651, 1384
DraI TTTAAA 1 cut(s) 1219
Eam1104I CTCTTC 2 cut(s) 702, 1512
EarI CTCTTC 2 cut(s) 702, 1512
Ecl136II GAGCTC 3 cut(s) 122, 167, 1400
Eco105I TACGTA 1 cut(s) 1587
Eco130I CCWWGG 1 cut(s) 945
Eco24I GRGCYC 3 cut(s) 124, 169, 1402
Eco32I GATATC 1 cut(s) 1165
Eco47I GGWCC 2 cut(s) 494, 1271
Eco53kI GAGCTC 3 cut(s) 122, 167, 1400
Eco57I CTGAAG 1 cut(s) 726
EcoICRI GAGCTC 3 cut(s) 122, 167, 1400
EcoNI CCTNNNNNAGG 1 cut(s) 1236
EcoRII CCWGG 6 cut(s) 198, 421, 577, 1231, 1237, 1458
EcoRV GATATC 1 cut(s) 1165
EcoT14I CCWWGG 1 cut(s) 945
EcoT22I ATGCAT 1 cut(s) 451
EcoT38I GRGCYC 3 cut(s) 124, 169, 1402
ErhI CCWWGG 1 cut(s) 945
FaeI CATG 9 cut(s) 176, 183, 251, 308, 479, 949, 1045, 1298, 1517
FatI CATG 9 cut(s) 172, 179, 247, 304, 475, 945, 1041, 1294, 1513
FauI CCCGC 1 cut(s) 1270
FbaI TGATCA 1 cut(s) 651
FokI GGATG 7 cut(s) 308, 405, 860, 1059, 1172, 1402, 1442
FriOI GRGCYC 3 cut(s) 124, 169, 1402
FspBI CTAG 6 cut(s) 365, 801, 1056, 1526, 1571, 1575
GlaI GCGC 4 cut(s) 35, 130, 246, 1533
GsuI CTGGAG 3 cut(s) 75, 183, 1481
HaeII RGCGCY 2 cut(s) 132, 1535
HaeIII GGCC 1 cut(s) 1237
HapII CCGG 1 cut(s) 1266
HgaI GACGC 1 cut(s) 677
HhaI GCGC 4 cut(s) 36, 131, 247, 1534
Hin1II CATG 9 cut(s) 176, 183, 251, 308, 479, 949, 1045, 1298, 1517
Hin6I GCGC 4 cut(s) 34, 129, 245, 1532
HinP1I GCGC 4 cut(s) 34, 129, 245, 1532
HincII GTYRAC 1 cut(s) 1102
HindII GTYRAC 1 cut(s) 1102
HindIII AAGCTT 2 cut(s) 620, 1346
HinfI GANTC 7 cut(s) 323, 480, 615, 796, 1060, 1224, 1331
HpaII CCGG 1 cut(s) 1266
HphI GGTGA 3 cut(s) 350, 536, 962
Hpy166II GTNNAC 3 cut(s) 277, 850, 1102
Hpy188I TCNGA 6 cut(s) 135, 442, 1148, 1175, 1229, 1389
Hpy188III TCNNGA 4 cut(s) 64, 793, 877, 1304
Hpy8I GTNNAC 3 cut(s) 277, 850, 1102
HpyAV CCTTC 4 cut(s) 605, 876, 1346, 1480
HpyCH4III ACNGT 2 cut(s) 19, 574
HpyCH4IV ACGT 2 cut(s) 679, 1586
HpyF10VI GCNNNNNNNGC 9 cut(s) 128, 173, 752, 962, 965, 971, 1177, 1211, 1531
HpyF3I CTNAG 5 cut(s) 123, 132, 441, 498, 1172
HpySE526I ACGT 2 cut(s) 679, 1586
Hsp92II CATG 9 cut(s) 176, 183, 251, 308, 479, 949, 1045, 1298, 1517
HspAI GCGC 4 cut(s) 34, 129, 245, 1532
Ksp22I TGATCA 1 cut(s) 651
Kzo9I GATC 4 cut(s) 60, 146, 651, 1384
LmnI GCTCC 2 cut(s) 164, 1522
LweI GCATC 6 cut(s) 286, 458, 882, 943, 983, 1201
MaeI CTAG 6 cut(s) 365, 801, 1056, 1526, 1571, 1575
MaeII ACGT 2 cut(s) 679, 1586
MaeIII GTNAC 2 cut(s) 19, 1078
MalI GATC 4 cut(s) 62, 148, 653, 1386
MboI GATC 4 cut(s) 60, 146, 651, 1384
MboII GAAGA 5 cut(s) 719, 914, 1124, 1220, 1529
MfeI CAATTG 2 cut(s) 1185, 1380
MhlI GDGCHC 6 cut(s) 124, 169, 605, 1173, 1363, 1402
MluCI AATT 7 cut(s) 219, 311, 812, 932, 1119, 1185, 1380
MmeI TCCRAC 4 cut(s) 50, 593, 976, 1252
Mph1103I ATGCAT 1 cut(s) 451
MroXI GAANNNNTTC 1 cut(s) 1119
MseI TTAA 2 cut(s) 1218, 1404
MslI CAYNNNNRTG 1 cut(s) 1046
MspA1I CMGCKG 1 cut(s) 752
MspI CCGG 1 cut(s) 1266
MspR9I CCNGG 6 cut(s) 200, 423, 579, 1233, 1239, 1460
MunI CAATTG 2 cut(s) 1185, 1380
Mva1269I GAATGC 3 cut(s) 451, 1180, 1553
MvaI CCWGG 6 cut(s) 200, 423, 579, 1233, 1239, 1460
MvnI CGCG 1 cut(s) 34
MwoI GCNNNNNNNGC 9 cut(s) 128, 173, 752, 962, 965, 971, 1177, 1211, 1531
NcoI CCATGG 1 cut(s) 945
NdeII GATC 4 cut(s) 60, 146, 651, 1384
NheI GCTAGC 1 cut(s) 1525
NlaIII CATG 9 cut(s) 176, 183, 251, 308, 479, 949, 1045, 1298, 1517
NlaIV GGNNCC 7 cut(s) 372, 887, 1000, 1030, 1317, 1362, 1428
NmuCI GTSAC 1 cut(s) 1078
NsiI ATGCAT 1 cut(s) 451
NspI RCATGY 1 cut(s) 183
PaqCI CACCTGC 2 cut(s) 551, 656
PciI ACATGT 1 cut(s) 179
PcsI WCGNNNNNNNCGW 1 cut(s) 685
PctI GAATGC 3 cut(s) 451, 1180, 1553
PdmI GAANNNNTTC 1 cut(s) 1119
PfeI GAWTC 7 cut(s) 323, 480, 615, 796, 1060, 1224, 1331
PfoI TCCNGGA 2 cut(s) 421, 1458
Ppu21I YACGTR 1 cut(s) 1587
PscI ACATGT 1 cut(s) 179
PsiI TTATAA 1 cut(s) 1418
Psp124BI GAGCTC 3 cut(s) 124, 169, 1402
Psp6I CCWGG 6 cut(s) 198, 421, 577, 1231, 1237, 1458
PspGI CCWGG 6 cut(s) 198, 421, 577, 1231, 1237, 1458
PspN4I GGNNCC 7 cut(s) 372, 887, 1000, 1030, 1317, 1362, 1428
PspPI GGNCC 3 cut(s) 494, 1235, 1271
PstI CTGCAG 1 cut(s) 751
PstNI CAGNNNCTG 1 cut(s) 965
PvuII CAGCTG 1 cut(s) 752
RsaI GTAC 4 cut(s) 362, 409, 576, 1585
RsaNI GTAC 4 cut(s) 361, 408, 575, 1584
RseI CAYNNNNRTG 1 cut(s) 1046
SacI GAGCTC 3 cut(s) 124, 169, 1402
SaqAI TTAA 2 cut(s) 1218, 1404
Sau3AI GATC 4 cut(s) 60, 146, 651, 1384
Sau96I GGNCC 3 cut(s) 494, 1235, 1271
ScrFI CCNGG 6 cut(s) 200, 423, 579, 1233, 1239, 1460
SduI GDGCHC 6 cut(s) 124, 169, 605, 1173, 1363, 1402
SfaNI GCATC 6 cut(s) 286, 458, 882, 943, 983, 1201
SfcI CTRYAG 3 cut(s) 596, 725, 747
SinI GGWCC 2 cut(s) 494, 1271
SmiMI CAYNNNNRTG 1 cut(s) 1046
SnaBI TACGTA 1 cut(s) 1587
Sse9I AATT 7 cut(s) 219, 311, 812, 932, 1119, 1185, 1380
SsiI CCGC 3 cut(s) 32, 969, 1263
SspMI CTAG 6 cut(s) 365, 801, 1056, 1526, 1571, 1575
SstI GAGCTC 3 cut(s) 124, 169, 1402
StyD4I CCNGG 6 cut(s) 198, 421, 577, 1231, 1237, 1458
StyI CCWWGG 1 cut(s) 945
TaaI ACNGT 2 cut(s) 19, 574
TaiI ACGT 2 cut(s) 682, 1589
TaqI TCGA 1 cut(s) 149
TasI AATT 7 cut(s) 219, 311, 812, 932, 1119, 1185, 1380
TatI WGTACW 1 cut(s) 407
TauI GCSGC 1 cut(s) 971
TfiI GAWTC 7 cut(s) 323, 480, 615, 796, 1060, 1224, 1331
Tru1I TTAA 2 cut(s) 1218, 1404
Tru9I TTAA 2 cut(s) 1218, 1404
TseFI GTSAC 1 cut(s) 1078
Tsp45I GTSAC 1 cut(s) 1078
TspDTI ATGAA 8 cut(s) 293, 336, 407, 566, 1030, 1064, 1406, 1530
TspGWI ACGGA 1 cut(s) 503
VpaK11BI GGWCC 2 cut(s) 494, 1271
XagI CCTNNNNNAGG 1 cut(s) 1236
XapI RAATTY 2 cut(s) 812, 1119
XceI RCATGY 1 cut(s) 183
XmnI GAANNNNTTC 1 cut(s) 1119
XspI CTAG 6 cut(s) 365, 801, 1056, 1526, 1571, 1575
Zsp2I ATGCAT 1 cut(s) 451
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.