pycom15g29530

Biotin carboxylase 1

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
26439443 .. 26444933
5491 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g29530.13

Sequence Viewer

Length: 1587 bp
ATGCCCATTTGCAGGACTGTCACTCCGACTCCCGGCTTATTTTTTGGGAGGACAAGAGAGATCCGGAGTTCCCAATGTAGCTTTATGGTAGGAAATAAAGTCAGCTTGCTAAGGCAGAGAGCTCGGGGGGCTCAAGTTAGTTTTAAACCCAGGAAGCATGGGGGAGCTCTCCATTCTACATGTCGTGCTGAAAAAATTCTGGTGGCAAACAGAGGAGAAATTGCTGTTCGCATTATTAGAACTGCCCATGAAATGGGAATACCTTGTGTAGCAGTTTACTCAACAATAGACAAGGATGCACTTCATGTGAAATTGGCCGATGAATCAGTTTGTATTGGTGAAGCTGCAAGCAGTCAGTCGTACTTGGTTGTTCCAAATGTTTTATCTGCTGCCATCAGTCGGAAATGTACAATGCTTCATCCAGGATACGGTTTCCTTTCTGAGAATGCATCCTTCGTTGAAATGTGCAGAGAACATGGAATCAACTTTATTGGGCCTAAGCCTGATAGCATCCGTGTTATGGGTGATAAATCAACTGCCAGGGACACAATGAAGAAAGCAGGCGTTCCAACTGTACCAGGAAGTGAAGGATTACTACAGAGCACAGAAGAAGGAATCAAACTTGCAGATGAAATTGGTTTTCCTGTTATGATCAAGGCAACAGCAGGAGGTGGAGGACGTGGCATGCGTCTTGCTAAAGAACCTGAGGAGTTTGTGAAGCTGTTACAGCAAGCAAAAAGTGAGGCCGCAGCTGCTTTTGGAAATGATGGAGTTTATTTGGAAAAGTACATCCAAAATCCTAGACATATTGAATTTCAGGTTCTAGCAGATAAATATGGAAATGTTGTTCACTTTGGAGAGCGGGATTGCAGCATCCAGAGAAGGAACCAAAAGCTGCTGGAAGAAGCACCTTCCCCTGCATTGACCCCGGAATTGCGGAAAGCTATGGGTGATGCAGCAGTTGCTGCAGCTGCCTCAATTGGTTACATTGGTGTTGGAACCATTGAATTCCTTTTGGATGAAAGAGGTTCCTTTTACTTCATGGAAATGAACACTCGGATTCAGGTTGAGCATCCTGTGACAGAAATGATTTCATCTGTTGACTTGATTGAAGAACAAATTCGTGTAGCTATGGGAGAAAAGCTCCGATACACACAGGATGAGATTGTGCTAAGAGGACATTCAATTGAATGTCGTATCAATGCAGAAGATGCTTTTAAAGGATTCCGACCTGGGCCAGGAAGAATAACAGCCTACTTACCATCCGGAGGTCCCTTTGTTAGAATGGATAGCCATGTTTATCCAGATTATGTGGTTCCTCCAAACTATGATTCCCTTCTTGGAAAGCTGATTGTATGGGCACCAACAAGAGAAAAGGCAATTGAACGAATGAAGAGGGCTCTTGAAGACACTGTTATAACAGGGGTTCCCACAACCATCGAATATCATAAACTTATCCTTGATATAGAGGATTTCAAAAATGGAAAAGTTGATACTGCTTTTATTCCAAAGCACGAGGAGGAGCTACGAGCGCCCCAACATTTGGTGCCTGCAGCTCCCAAAGAACTAGCTGGTGCATCTGGTTAG
Functional Annotation

Protein Analysis

529

Amino Acids

57.98

Weight (kDa)

7.62

Isoelectric Point (pI)

38.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1418
AccB1I GGYRCC 2 cut(s) 1360, 1546
AccB7I CCANNNNNTGG 2 cut(s) 253, 1543
AccBSI CCGCTC 1 cut(s) 862
AccIII TCCGGA 2 cut(s) 63, 1265
AciI CCGC 3 cut(s) 747, 862, 937
AclWI GGATC 1 cut(s) 55
AcoI YGGCCR 1 cut(s) 315
AcsI RAATTY 4 cut(s) 195, 812, 1007, 1119
AfaI GTAC 4 cut(s) 362, 409, 576, 788
AfiI CCNNNNNNNGG 9 cut(s) 12, 32, 253, 399, 428, 520, 1238, 1268, 1543
AflIII ACRYGT 1 cut(s) 179
AgsI TTSAA 9 cut(s) 461, 812, 1007, 1112, 1185, 1190, 1385, 1406, 1477
AjiI CACGTC 1 cut(s) 680
AjnI CCWGG 6 cut(s) 149, 421, 539, 577, 1231, 1237
AjuI GAANNNNNNNTTGG 2 cut(s) 1315, 1347
AloI GAACNNNNNNTCC 2 cut(s) 831, 863
Alw21I GWGCWC 3 cut(s) 124, 169, 605
AlwI GGATC 1 cut(s) 55
AlwNI CAGNNNCTG 1 cut(s) 965
Ama87I CYCGRG 1 cut(s) 123
Aor13HI TCCGGA 2 cut(s) 63, 1265
AoxI GGCC 4 cut(s) 315, 494, 744, 1235
ApoI RAATTY 4 cut(s) 195, 812, 1007, 1119
Asp700I GAANNNNTTC 2 cut(s) 195, 1119
AspLEI GCGC 1 cut(s) 1534
AspS9I GGNCC 3 cut(s) 494, 1235, 1271
AsuC2I CCSGG 2 cut(s) 33, 929
AsuHPI GGTGA 3 cut(s) 350, 536, 962
AvaI CYCGRG 1 cut(s) 123
AvaII GGWCC 1 cut(s) 1271
AxyI CCTNAGG 1 cut(s) 705
BaeGI GKGCMC 1 cut(s) 1363
BanI GGYRCC 2 cut(s) 1360, 1546
BanII GRGCYC 4 cut(s) 124, 133, 169, 1402
BarI GAAGNNNNNNTAC 2 cut(s) 579, 611
BauI CACGAG 1 cut(s) 1514
BbsI GAAGAC 1 cut(s) 1413
Bbv12I GWGCWC 3 cut(s) 124, 169, 605
BccI CCATC 4 cut(s) 401, 761, 1270, 1445
BcgI CGANNNNNNTGC 2 cut(s) 104, 138
BciT130I CCWGG 6 cut(s) 151, 423, 541, 579, 1233, 1239
BciVI GTATCC 1 cut(s) 419
BclI TGATCA 1 cut(s) 651
BcnI CCSGG 2 cut(s) 33, 929
BfaI CTAG 3 cut(s) 801, 824, 1568
BfmI CTRYAG 3 cut(s) 596, 966, 1551
BfoI RGCGCY 1 cut(s) 1535
BfuI GTATCC 1 cut(s) 419
Bme1390I CCNGG 8 cut(s) 33, 151, 423, 541, 579, 929, 1233, 1239
Bme18I GGWCC 1 cut(s) 1271
BmeT110I CYCGRG 1 cut(s) 123
BmgBI CACGTC 1 cut(s) 680
BmgT120I GGNCC 3 cut(s) 494, 1235, 1271
BmiI GGNNCC 8 cut(s) 887, 1000, 1030, 1273, 1317, 1362, 1428, 1548
BmrFI CCNGG 8 cut(s) 33, 151, 423, 541, 579, 929, 1233, 1239
BmsI GCATC 7 cut(s) 286, 458, 519, 882, 943, 1081, 1201
BpiI GAAGAC 1 cut(s) 1413
BplI GAGNNNNNCTC 2 cut(s) 1128, 1160
Bpu10I CCTNAGC 2 cut(s) 110, 498
BpuEI CTTGAG 1 cut(s) 117
BpuMI CCSGG 2 cut(s) 33, 929
BsaJI CCNNGG 4 cut(s) 149, 540, 927, 1232
BsaWI WCCGGW 2 cut(s) 63, 1265
BsaXI ACNNNNNCTCC 4 cut(s) 7, 13, 37, 43
Bsc4I CCNNNNNNNGG 9 cut(s) 12, 32, 253, 399, 428, 520, 1238, 1268, 1543
Bse21I CCTNAGG 1 cut(s) 705
BseAI TCCGGA 2 cut(s) 63, 1265
BseBI CCWGG 6 cut(s) 151, 423, 541, 579, 1233, 1239
BseDI CCNNGG 4 cut(s) 149, 540, 927, 1232
BseLI CCNNNNNNNGG 9 cut(s) 12, 32, 253, 399, 428, 520, 1238, 1268, 1543
BseMII CTCAG 2 cut(s) 432, 696
BseRI GAGGAG 4 cut(s) 228, 722, 1532, 1535
BseSI GKGCMC 1 cut(s) 1363
BsgI GTGCAG 1 cut(s) 487
BshFI GGCC 4 cut(s) 317, 496, 746, 1237
BshNI GGYRCC 2 cut(s) 1360, 1546
BsiHKAI GWGCWC 3 cut(s) 124, 169, 605
BsiHKCI CYCGRG 1 cut(s) 123
BsiSI CCGG 4 cut(s) 33, 64, 929, 1266
BslFI GGGAC 2 cut(s) 557, 1257
BslI CCNNNNNNNGG 9 cut(s) 12, 32, 253, 399, 428, 520, 1238, 1268, 1543
BsmFI GGGAC 2 cut(s) 557, 1257
BsmI GAATGC 1 cut(s) 451
BsnI GGCC 4 cut(s) 317, 496, 746, 1237
BsoBI CYCGRG 1 cut(s) 123
Bsp1286I GDGCHC 6 cut(s) 124, 133, 169, 605, 1363, 1402
Bsp13I TCCGGA 2 cut(s) 63, 1265
Bsp1407I TGTACA 1 cut(s) 407
Bsp143I GATC 2 cut(s) 60, 651
BspACI CCGC 3 cut(s) 747, 862, 937
BspANI GGCC 4 cut(s) 317, 496, 746, 1237
BspCNI CTCAG 2 cut(s) 433, 697
BspEI TCCGGA 2 cut(s) 63, 1265
BspLI GGNNCC 8 cut(s) 887, 1000, 1030, 1273, 1317, 1362, 1428, 1548
BspMAI CTGCAG 2 cut(s) 970, 1555
BspPI GGATC 1 cut(s) 55
BspT107I GGYRCC 2 cut(s) 1360, 1546
BsrBI CCGCTC 1 cut(s) 862
BsrGI TGTACA 1 cut(s) 407
BssECI CCNNGG 4 cut(s) 149, 540, 927, 1232
BssMI GATC 2 cut(s) 60, 651
BssSI CACGAG 1 cut(s) 1514
Bst2BI CACGAG 1 cut(s) 1514
Bst2UI CCWGG 6 cut(s) 151, 423, 541, 579, 1233, 1239
Bst4CI ACNGT 4 cut(s) 19, 431, 574, 1414
Bst6I CTCTTC 1 cut(s) 1388
BstAPI GCANNNNNTGC 3 cut(s) 962, 965, 1211
BstAUI TGTACA 1 cut(s) 407
BstC8I GCNNGC 6 cut(s) 107, 349, 562, 686, 732, 1551
BstDEI CTNAG 5 cut(s) 110, 441, 498, 705, 1172
BstENI CCTNNNNNAGG 1 cut(s) 1236
BstH2I RGCGCY 1 cut(s) 1535
BstHHI GCGC 1 cut(s) 1534
BstKTI GATC 2 cut(s) 63, 654
BstMBI GATC 2 cut(s) 60, 651
BstMWI GCNNNNNNNGC 8 cut(s) 128, 727, 752, 962, 965, 971, 1211, 1531
BstNI CCWGG 6 cut(s) 151, 423, 541, 579, 1233, 1239
BstNSI RCATGY 2 cut(s) 183, 688
BstSCI CCNGG 8 cut(s) 31, 149, 421, 539, 577, 927, 1231, 1237
BstSFI CTRYAG 3 cut(s) 596, 966, 1551
BstSLI GKGCMC 1 cut(s) 1363
BstV2I GAAGAC 1 cut(s) 1413
BstX2I RGATCY 1 cut(s) 60
BstYI RGATCY 1 cut(s) 60
Bsu36I CCTNAGG 1 cut(s) 705
BsuI GTATCC 1 cut(s) 419
BsuRI GGCC 4 cut(s) 317, 496, 746, 1237
BtrI CACGTC 1 cut(s) 680
BtsIMutI CAGTG 1 cut(s) 1410
Cac8I GCNNGC 6 cut(s) 107, 349, 562, 686, 732, 1551
CaiI CAGNNNCTG 1 cut(s) 965
CfoI GCGC 1 cut(s) 1534
Cfr13I GGNCC 3 cut(s) 494, 1235, 1271
CseI GACGC 1 cut(s) 677
Csp6I GTAC 4 cut(s) 361, 408, 575, 787
CviAII CATG 8 cut(s) 158, 180, 248, 305, 476, 685, 1042, 1295
CviQI GTAC 4 cut(s) 361, 408, 575, 787
DdeI CTNAG 5 cut(s) 110, 441, 498, 705, 1172
DpnI GATC 2 cut(s) 62, 653
DpnII GATC 2 cut(s) 60, 651
DraI TTTAAA 2 cut(s) 145, 1219
EaeI YGGCCR 1 cut(s) 315
Eam1104I CTCTTC 1 cut(s) 1388
EarI CTCTTC 1 cut(s) 1388
Ecl136II GAGCTC 2 cut(s) 122, 167
Eco24I GRGCYC 4 cut(s) 124, 133, 169, 1402
Eco47I GGWCC 1 cut(s) 1271
Eco53kI GAGCTC 2 cut(s) 122, 167
Eco81I CCTNAGG 1 cut(s) 705
Eco88I CYCGRG 1 cut(s) 123
EcoICRI GAGCTC 2 cut(s) 122, 167
EcoNI CCTNNNNNAGG 1 cut(s) 1236
EcoO109I RGGNCCY 1 cut(s) 1271
EcoRI GAATTC 1 cut(s) 1007
EcoRII CCWGG 6 cut(s) 149, 421, 539, 577, 1231, 1237
EcoT22I ATGCAT 1 cut(s) 451
EcoT38I GRGCYC 4 cut(s) 124, 133, 169, 1402
FaeI CATG 8 cut(s) 161, 183, 251, 308, 479, 688, 1045, 1298
FaqI GGGAC 2 cut(s) 557, 1257
FatI CATG 8 cut(s) 157, 179, 247, 304, 475, 684, 1041, 1294
FauI CCCGC 1 cut(s) 855
FbaI TGATCA 1 cut(s) 651
FriOI GRGCYC 4 cut(s) 124, 133, 169, 1402
FspBI CTAG 3 cut(s) 801, 824, 1568
GlaI GCGC 1 cut(s) 1533
HaeII RGCGCY 1 cut(s) 1535
HaeIII GGCC 4 cut(s) 317, 496, 746, 1237
HapII CCGG 4 cut(s) 33, 64, 929, 1266
HgaI GACGC 1 cut(s) 677
HhaI GCGC 1 cut(s) 1534
Hin1II CATG 8 cut(s) 161, 183, 251, 308, 479, 688, 1045, 1298
Hin6I GCGC 1 cut(s) 1532
HinP1I GCGC 1 cut(s) 1532
HincII GTYRAC 1 cut(s) 1102
HindII GTYRAC 1 cut(s) 1102
HinfI GANTC 7 cut(s) 28, 323, 480, 615, 1060, 1224, 1331
HpaII CCGG 4 cut(s) 33, 64, 929, 1266
HphI GGTGA 3 cut(s) 350, 536, 962
Hpy166II GTNNAC 3 cut(s) 277, 850, 1102
Hpy188I TCNGA 6 cut(s) 27, 402, 442, 1059, 1148, 1229
Hpy188III TCNNGA 5 cut(s) 64, 877, 1266, 1304, 1403
Hpy8I GTNNAC 3 cut(s) 277, 850, 1102
HpyAV CCTTC 6 cut(s) 463, 581, 605, 876, 921, 1346
HpyCH4III ACNGT 4 cut(s) 19, 431, 574, 1414
HpyCH4IV ACGT 1 cut(s) 679
HpyF10VI GCNNNNNNNGC 8 cut(s) 128, 727, 752, 962, 965, 971, 1211, 1531
HpyF3I CTNAG 5 cut(s) 110, 441, 498, 705, 1172
HpySE526I ACGT 1 cut(s) 679
Hsp92II CATG 8 cut(s) 161, 183, 251, 308, 479, 688, 1045, 1298
HspAI GCGC 1 cut(s) 1532
Kpn2I TCCGGA 2 cut(s) 63, 1265
Ksp22I TGATCA 1 cut(s) 651
Kzo9I GATC 2 cut(s) 60, 651
LmnI GCTCC 4 cut(s) 164, 1149, 1522, 1561
LweI GCATC 7 cut(s) 286, 458, 519, 882, 943, 1081, 1201
MaeI CTAG 3 cut(s) 801, 824, 1568
MaeII ACGT 1 cut(s) 679
MaeIII GTNAC 4 cut(s) 19, 723, 983, 1078
MalI GATC 2 cut(s) 62, 653
MbiI CCGCTC 1 cut(s) 862
MboI GATC 2 cut(s) 60, 651
MboII GAAGA 8 cut(s) 565, 620, 914, 1124, 1220, 1254, 1405, 1418
MfeI CAATTG 3 cut(s) 978, 1185, 1380
MflI RGATCY 1 cut(s) 60
MhlI GDGCHC 6 cut(s) 124, 133, 169, 605, 1363, 1402
MlyI GAGTC 1 cut(s) 22
MmeI TCCRAC 5 cut(s) 50, 380, 593, 976, 1252
Mph1103I ATGCAT 1 cut(s) 451
MroI TCCGGA 2 cut(s) 63, 1265
MroXI GAANNNNTTC 2 cut(s) 195, 1119
MseI TTAA 2 cut(s) 144, 1218
MslI CAYNNNNRTG 1 cut(s) 1046
MspA1I CMGCKG 2 cut(s) 752, 971
MspI CCGG 4 cut(s) 33, 64, 929, 1266
MspR9I CCNGG 8 cut(s) 33, 151, 423, 541, 579, 929, 1233, 1239
MunI CAATTG 3 cut(s) 978, 1185, 1380
Mva1269I GAATGC 1 cut(s) 451
MvaI CCWGG 6 cut(s) 151, 423, 541, 579, 1233, 1239
MwoI GCNNNNNNNGC 8 cut(s) 128, 727, 752, 962, 965, 971, 1211, 1531
NciI CCSGG 2 cut(s) 33, 929
NdeII GATC 2 cut(s) 60, 651
NlaIII CATG 8 cut(s) 161, 183, 251, 308, 479, 688, 1045, 1298
NlaIV GGNNCC 8 cut(s) 887, 1000, 1030, 1273, 1317, 1362, 1428, 1548
NmuCI GTSAC 2 cut(s) 19, 1078
NsiI ATGCAT 1 cut(s) 451
NspI RCATGY 2 cut(s) 183, 688
PaeI GCATGC 1 cut(s) 688
PciI ACATGT 1 cut(s) 179
PcsI WCGNNNNNNNCGW 1 cut(s) 685
PctI GAATGC 1 cut(s) 451
PdmI GAANNNNTTC 2 cut(s) 195, 1119
PfeI GAWTC 6 cut(s) 323, 480, 615, 1060, 1224, 1331
PflMI CCANNNNNTGG 2 cut(s) 253, 1543
PfoI TCCNGGA 1 cut(s) 421
PleI GAGTC 1 cut(s) 22
PpsI GAGTC 1 cut(s) 22
PpuMI RGGWCCY 1 cut(s) 1271
PscI ACATGT 1 cut(s) 179
PsiI TTATAA 1 cut(s) 1418
Psp124BI GAGCTC 2 cut(s) 124, 169
Psp5II RGGWCCY 1 cut(s) 1271
Psp6I CCWGG 6 cut(s) 149, 421, 539, 577, 1231, 1237
PspGI CCWGG 6 cut(s) 149, 421, 539, 577, 1231, 1237
PspN4I GGNNCC 8 cut(s) 887, 1000, 1030, 1273, 1317, 1362, 1428, 1548
PspPI GGNCC 3 cut(s) 494, 1235, 1271
PspPPI RGGWCCY 1 cut(s) 1271
PstI CTGCAG 2 cut(s) 970, 1555
PstNI CAGNNNCTG 1 cut(s) 965
PsuI RGATCY 1 cut(s) 60
PvuII CAGCTG 2 cut(s) 752, 971
RsaI GTAC 4 cut(s) 362, 409, 576, 788
RsaNI GTAC 4 cut(s) 361, 408, 575, 787
RseI CAYNNNNRTG 1 cut(s) 1046
SacI GAGCTC 2 cut(s) 124, 169
SaqAI TTAA 2 cut(s) 144, 1218
Sau3AI GATC 2 cut(s) 60, 651
Sau96I GGNCC 3 cut(s) 494, 1235, 1271
SchI GAGTC 1 cut(s) 22
ScrFI CCNGG 8 cut(s) 33, 151, 423, 541, 579, 929, 1233, 1239
SduI GDGCHC 6 cut(s) 124, 133, 169, 605, 1363, 1402
SfaNI GCATC 7 cut(s) 286, 458, 519, 882, 943, 1081, 1201
SfcI CTRYAG 3 cut(s) 596, 966, 1551
SinI GGWCC 1 cut(s) 1271
SmiMI CAYNNNNRTG 1 cut(s) 1046
SmlI CTYRAG 1 cut(s) 132
SmoI CTYRAG 1 cut(s) 132
SphI GCATGC 1 cut(s) 688
SsiI CCGC 3 cut(s) 747, 862, 937
SspMI CTAG 3 cut(s) 801, 824, 1568
SstI GAGCTC 2 cut(s) 124, 169
StyD4I CCNGG 8 cut(s) 31, 149, 421, 539, 577, 927, 1231, 1237
TaaI ACNGT 4 cut(s) 19, 431, 574, 1414
TaiI ACGT 1 cut(s) 682
TaqI TCGA 1 cut(s) 1440
TatI WGTACW 2 cut(s) 407, 786
TauI GCSGC 1 cut(s) 749
TfiI GAWTC 6 cut(s) 323, 480, 615, 1060, 1224, 1331
Tru1I TTAA 2 cut(s) 144, 1218
Tru9I TTAA 2 cut(s) 144, 1218
TscAI CASTG 1 cut(s) 1417
TseFI GTSAC 2 cut(s) 19, 1078
Tsp45I GTSAC 2 cut(s) 19, 1078
TspGWI ACGGA 1 cut(s) 503
TspRI CASTG 1 cut(s) 1417
Van91I CCANNNNNTGG 2 cut(s) 253, 1543
VpaK11BI GGWCC 1 cut(s) 1271
XagI CCTNNNNNAGG 1 cut(s) 1236
XapI RAATTY 4 cut(s) 195, 812, 1007, 1119
XceI RCATGY 2 cut(s) 183, 688
XmnI GAANNNNTTC 2 cut(s) 195, 1119
XspI CTAG 3 cut(s) 801, 824, 1568
Zsp2I ATGCAT 1 cut(s) 451
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.