Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0003103

Physical Location & Seq

Genomic Coordinates Reverse (-)

17513984 .. 17522404

Gene Structure 8421 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2553 bp

ATGAGTCAATCGAGAGGCTCACGGGCGGATTTGGAGGCCGGCGGCAGCCGCTCGGGCGACTTGGACGACGAGTCCTCGTCCAGTCCTTTTGACATTGCCAGAACTAAGGATGCTTCGGTCGAGCGCCTCAAGCGCTGGAGGCAAGCGGCACTTGTGCTGAATGCTTCTCGTCGATTCCGGTACACCTTAGACTTGAAAAAGGAAGAAGAAAAGCAGCAGACGCTAAGGAAGATTAGAGCCCATGCACAAGCCATACGAGCTGCATATCTTTTCAAGGAAGCTGGAGACCAGCAAGTGATTGGAGTCGTAGTGCCAAAACCAAGTTCTACTGGCGATTTTCCAATTGGACAAGAGGAACTAGTTCCAGTGACGAGGGATCATAATTTTGCTGCTCTTCAACAATATGGGGGGGTCACAGGCTTAGGGGACCTATTGAAAACAAATCTCGACAAGGGAATTCATGGAGATGATGTTGATTTACTGAAACGGAAAAATGCATTTGGGTCGAACACATATCCTAGGAAAAAAGCAAGAAGTTTCTGGAGATTTCTTTGGGAAGCTTGGCAAGATCTTACTCTGATCATTTTGATGGTAGCTGCAGTGGCTTCTTTAGCGCTGGGTATAAAAACAGAGGGTATAAAGGAGGGATGGTATGATGGGGGCAGCATTGCTTTTGCAGTTCTCCTTGTCATTGTTGTTACAGCCGTTAGTGATTACAGACAATCTCTTCAGTTCCAGAATTTAAATGAGGAAAAGAGAAATATACATTTGGAAGTCATTAGAGGTGGTAGACGTGTTGAGGTCTCAATTTATGATCTAGTTGTTGGTGATGTTGTACCCCTTAATATCGGCGATCAGGTCCCTGCTGATGGCATTTTAATAACTGGGTACTCACTTGCAATAGATGAGTCGAGTATGACTGGAGAGAGCAAGATTGTTCGCAAGGACTCCAAGGACCCATTTCTAATGTCTGGCTGCAAAGTAGCAGATGGAAATGGTACTATGCTGGTAACTAGTGTTGGGATTAATACTGAATGGGGAATGCTCATGGCTAGTATTTCTGAAGATACTGGTGAAGAAACTCCTTTGCAGGTGCGCTTGAACGGGGTTGCGACTTTCATTGGTATTGTTGGACTCACAGTGGCTTTTCTTGTCTTGATAGTCCTGTTGGTTAGATACTTTACTGGCCATACAAAAGATACAACTGGAAAACCTCAGTTTACCGCTGGAAAGACAAAATTTGGAGATGCCTTAGATGGAGCCATTAAAATTGTTACTATTGCAGTCACCATTGTGGTGGTTGCTGTTCCTGAAGGGCTCCCTTTAGCTGTTACCTTGACGCTTGCCTACTCAATGAGAAAAATGATGGCAGATAAGGCCTTGGTGCGGAGGCTGTCTGCATGTGAAACCATGGGTTCTGCAACTACAATCTGCAGCGACAAGACTGGAACCTTAACATTAAACAAGATGGCTGTTGTTGAGGCTTTTACGGGTGGGAGGAAAATCGTTCTCTCTGGCGATAAGCCAGACTTGTCTCCAATGCTATCATCTTTGCTTATTGAAGGCATCGCATTCAATACAAATGGCAGTGTTTATATGCCTGAGACTGGCGGTGATATAGAGGTTTCTGGATCACCAACTGAAAAGGCAATTCTGCAATTGGGAATCAAGCTCGGAATGAATTTTGATGCCATAAGGTCTGAGTCTTCACTTCTTCACGTGTTCCCATTCAACTCTGAGAAAAAACGAGGCGGTGCTGCAGTTAAATTGCCCAATTCCGAAGTTCATATACACTGGAAAGGGGCTGCTGAAATAGTCTTGGCCTGTTGTACAAAGTACCTGGATCCAAATGACAATTTGGTAGCTATGGATGATGAGAAGTCAAAAATTTTCAGGAAATCAATTGAGGATATGGCGGCTCGCAGTTTGCGTTGTGTTGCCATTGCTTATAGACCACATGAATTGGAAGATGTTCCAACTGATGGACAACTATCTGAGTGGGCATTGCCTGATGATGACCTTGTCTTGCTTGCTATTGTTGGTATAAAGGATCCTTGTCGGCCTGGGGTGGGAGATGCAGTGCGACTATGCCAAAAAGCTGGTGTTAAGGTGCGCATGGTCACGGGTGACAATGTTCAAACTGCGAAAGCAATTGCTATGGAATGTGGCATACTTGCTCCAGATTCAGATGCTACCGAGCCAACACTCATTGAAGGAAAAGTTTTCCGTGAACTTTCGGATAAGCAGAGAGAAGATTATGCTGAAAAGATTTCGGTGATGGGGCGGTCTTCCCCAAATGACAAGCTTCTGCTTGTGCAAGCATTGAGGAGAAGGGGTCATGTTGTTGCTGTAACCGGAGATGGCACTAATGATGCTCCTGCACTGCATGAGGCGGACATTGGTCTTGCAATGGGTATTCAAGGGACTGAAGTTGCCAAAGAGAGTTCAGATATCATTATCTTGGACGATAATTTTGCTTCAGTTGTGAAGGTTAGTAACTGTATGAACATTTTGCAGTTTTTCTTAGTAATGTCATTGTCTATTGTATTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0009506 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0030054 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

851

Amino Acids

92.05

Weight (kDa)

5.77

Isoelectric Point (pI)

41.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CaATP_NAI	PF12515	28 - 70	1.2e-17	Ca2+-ATPase N terminal autoinhibitory domain
Cation_ATPase_N	PF00690	136 - 203	3.2e-12	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	257 - 352	6e-21	P-type ATPase actuator domain
Hydrolase	PF00702	476 - 799	7.3e-15	haloacid dehalogenase-like hydrolase
Cation_ATPase	PF13246	519 - 688	6.9e-31	P-type ATPase, cytoplasmic domain N

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0003103)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29900 AT4G29900 AT5G57110 AT5G57110 AT5G57110
fragaria_vesca	FvH4_4g06940 FvH4_4g06940 FvH4_4g06940 FvH4_4g06940 FvH4_4g06940 FvH4_4g06940 FvH4_4g06940
malus_domestica	MD13G1241000.v1.1 MD16G1245600.v1.1 MD16G1246100.v1.1
prunus_persica	Prupe.1G072600_v2.0.a1 Prupe.8G012900_v2.0.a1
pyrus_communis	pycom13g21220
rosa_chinensis	RchiOBHm_Chr4g0398891 RchiOBHm_Chr4g0398951
rosa_laevigata	RLG00000009307 RLG00000009309 RLG00000009365
rosa_multiflora	Rmu_sc0004094.1_g000033 Rmu_ssc0000064.1_g000006
rosa_roxburghii	Rroxscaffold_5G00343340 Rroxscaffold_5G00343930 Rroxscaffold_5G00344000
rosa_rugosa	Rorug04G0013200
rosa_samantha	Rh4AG091100 Rh4CG093100 Rh4CG099100 Rh4CG099400
rosa_wichuraiana	Rw4G007100 Rw4G007130 Rw4G007500 Rw4G007540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1081
Acc16I	TGCGCA	1 cut(s)	2114
Acc36I	ACCTGC	1 cut(s)	1081
AccB7I	CCANNNNNTGG	1 cut(s)	1982
AccBSI	CCGCTC	1 cut(s)	51
AccI	GTMKAC	1 cut(s)	790
AclWI	GGATC	6 cut(s)	384, 1639, 1838, 1851, 2045, 2058
AcoI	YGGCCR	1 cut(s)	1186
AcsI	RAATTY	5 cut(s)	456, 739, 1238, 1681, 1887
AcuI	CTGAAG	5 cut(s)	713, 1083, 1332, 2448, 2463
AcvI	CACGTG	1 cut(s)	1720
AfaI	GTAC	6 cut(s)	182, 837, 890, 1000, 1831, 1838
AfeI	AGCGCT	2 cut(s)	134, 615
AfiI	CCNNNNNNNGG	5 cut(s)	869, 1386, 1607, 1982, 2069
AflIII	ACRYGT	2 cut(s)	793, 1719
AhdI	GACNNNNNGTC	1 cut(s)	70
AhlI	ACTAGT	2 cut(s)	358, 1013
AjiI	CACGTC	1 cut(s)	794
AjnI	CCWGG	2 cut(s)	1839, 2062
AjuI	GAANNNNNNNTTGG	2 cut(s)	307, 339
AleI	CACNNNNGTG	1 cut(s)	1292
AluBI	AGCT	9 cut(s)	260, 281, 560, 596, 1328, 1672, 1865, 2099, 2305
AluI	AGCT	9 cut(s)	260, 281, 560, 596, 1328, 1672, 1865, 2099, 2305
Alw26I	GTCTC	4 cut(s)	279, 808, 1539, 1598
AlwI	GGATC	6 cut(s)	384, 1639, 1838, 1851, 2045, 2058
Ama87I	CYCGRG	1 cut(s)	52
Aor51HI	AGCGCT	2 cut(s)	134, 615
AoxI	GGCC	5 cut(s)	36, 1186, 1377, 1821, 2060
ApoI	RAATTY	5 cut(s)	456, 739, 1238, 1681, 1887
ArsI	GACNNNNNNTTYG	2 cut(s)	2456, 2488
AseI	ATTAAT	1 cut(s)	1026
Asp700I	GAANNNNTTC	2 cut(s)	360, 1971
AspA2I	CCTAGG	1 cut(s)	518
AspLEI	GCGC	5 cut(s)	126, 135, 616, 1098, 2115
AspS9I	GGNCC	3 cut(s)	427, 859, 955
AsuHPI	GGTGA	7 cut(s)	839, 1085, 1279, 1625, 1626, 2138, 2287
AvaI	CYCGRG	1 cut(s)	52
AvaII	GGWCC	3 cut(s)	427, 859, 955
AvrII	CCTAGG	1 cut(s)	518
BalI	TGGCCA	1 cut(s)	1188
BamHI	GGATCC	2 cut(s)	1843, 2050
BanII	GRGCYC	2 cut(s)	241, 1320
BarI	GAAGNNNNNNTAC	2 cut(s)	1773, 1805
BbrPI	CACGTG	1 cut(s)	1720
BbsI	GAAGAC	2 cut(s)	1698, 2280
BceAI	ACGGC	1 cut(s)	689
BcgI	CGANNNNNNTGC	4 cut(s)	486, 520, 2456, 2490
BciT130I	CCWGG	2 cut(s)	1841, 2064
BclI	TGATCA	1 cut(s)	579
BcoDI	GTCTC	4 cut(s)	279, 808, 1539, 1598
BcuI	ACTAGT	2 cut(s)	358, 1013
BfaI	CTAG	5 cut(s)	359, 519, 818, 1014, 1053
BfmI	CTRYAG	3 cut(s)	597, 1432, 1758
BfoI	RGCGCY	3 cut(s)	127, 136, 617
BfuAI	ACCTGC	1 cut(s)	1081
BglI	GCCNNNNNGGC	1 cut(s)	54
BglII	AGATCT	1 cut(s)	568
BlnI	CCTAGG	1 cut(s)	518
Bme1390I	CCNGG	2 cut(s)	1841, 2064
Bme18I	GGWCC	3 cut(s)	427, 859, 955
BmeRI	GACNNNNNGTC	1 cut(s)	70
BmeT110I	CYCGRG	1 cut(s)	52
BmgBI	CACGTC	1 cut(s)	794
BmgT120I	GGNCC	3 cut(s)	427, 859, 955
BmiI	GGNNCC	8 cut(s)	428, 861, 957, 1261, 1319, 1450, 1845, 2052
BmrFI	CCNGG	2 cut(s)	1841, 2064
BmrI	ACTGGG	1 cut(s)	894
BmsI	GCATC	7 cut(s)	100, 1237, 1575, 1678, 2065, 2179, 2362
BmuI	ACTGGG	1 cut(s)	894
BoxI	GACNNNNGTC	1 cut(s)	2400
BpiI	GAAGAC	2 cut(s)	1698, 2280
BpmI	CTGGAG	5 cut(s)	157, 303, 562, 942, 2163
Bpu10I	CCTNAGC	2 cut(s)	224, 421
BpuEI	CTTGAG	1 cut(s)	113
BsaAI	YACGTR	1 cut(s)	1720
BsaI	GGTCTC	2 cut(s)	279, 808
BsaJI	CCNNGG	5 cut(s)	518, 951, 1380, 1410, 2063
BsaWI	WCCGGW	2 cut(s)	177, 2354
Bsc4I	CCNNNNNNNGG	5 cut(s)	869, 1386, 1607, 1982, 2069
Bse118I	RCCGGY	1 cut(s)	38
Bse3DI	GCAATG	5 cut(s)	93, 666, 1941, 2003, 2415
BseBI	CCWGG	2 cut(s)	1841, 2064
BseDI	CCNNGG	5 cut(s)	518, 951, 1380, 1410, 2063
BseGI	GGATG	3 cut(s)	115, 653, 1876
BseLI	CCNNNNNNNGG	5 cut(s)	869, 1386, 1607, 1982, 2069
BseMI	GCAATG	5 cut(s)	93, 666, 1941, 2003, 2415
BseMII	CTCAG	5 cut(s)	1229, 1593, 1692, 1728, 1986
BseRI	GAGGAG	1 cut(s)	2341
BseYI	CCCAGC	1 cut(s)	616
BsgI	GTGCAG	1 cut(s)	2364
Bsh1285I	CGRYCG	1 cut(s)	120
BshFI	GGCC	5 cut(s)	38, 1188, 1379, 1823, 2062
BsiEI	CGRYCG	1 cut(s)	120
BsiHKCI	CYCGRG	1 cut(s)	52
BsiSI	CCGG	3 cut(s)	39, 178, 2355
BslFI	GGGAC	3 cut(s)	440, 845, 2437
BslI	CCNNNNNNNGG	5 cut(s)	869, 1386, 1607, 1982, 2069
BsmAI	GTCTC	4 cut(s)	279, 808, 1539, 1598
BsmFI	GGGAC	3 cut(s)	440, 845, 2437
BsmI	GAATGC	3 cut(s)	166, 1047, 1571
BsnI	GGCC	5 cut(s)	38, 1188, 1379, 1823, 2062
Bso31I	GGTCTC	2 cut(s)	279, 808
BsoBI	CYCGRG	1 cut(s)	52
Bsp1286I	GDGCHC	2 cut(s)	241, 1320
Bsp1407I	TGTACA	1 cut(s)	1829
Bsp143I	GATC	8 cut(s)	376, 568, 579, 814, 853, 1631, 1843, 2050
Bsp19I	CCATGG	1 cut(s)	1410
BspANI	GGCC	5 cut(s)	38, 1188, 1379, 1823, 2062
BspCNI	CTCAG	5 cut(s)	1228, 1594, 1693, 1729, 1987
BspLI	GGNNCC	8 cut(s)	428, 861, 957, 1261, 1319, 1450, 1845, 2052
BspMAI	CTGCAG	3 cut(s)	601, 1436, 1762
BspMI	ACCTGC	1 cut(s)	1081
BspPI	GGATC	6 cut(s)	384, 1639, 1838, 1851, 2045, 2058
BspQI	GCTCTTC	1 cut(s)	399
BspTNI	GGTCTC	2 cut(s)	279, 808
BsrBI	CCGCTC	1 cut(s)	51
BsrDI	GCAATG	5 cut(s)	93, 666, 1941, 2003, 2415
BsrFI	RCCGGY	1 cut(s)	38
BsrGI	TGTACA	1 cut(s)	1829
BssAI	RCCGGY	1 cut(s)	38
BssECI	CCNNGG	5 cut(s)	518, 951, 1380, 1410, 2063
BssMI	GATC	8 cut(s)	376, 568, 579, 814, 853, 1631, 1843, 2050
BssT1I	CCWWGG	4 cut(s)	518, 951, 1380, 1410
Bst2UI	CCWGG	2 cut(s)	1841, 2064
Bst4CI	ACNGT	2 cut(s)	1141, 2501
Bst6I	CTCTTC	2 cut(s)	399, 732
BstAUI	TGTACA	1 cut(s)	1829
BstBAI	YACGTR	1 cut(s)	1720
BstC8I	GCNNGC	6 cut(s)	40, 144, 1344, 1921, 2031, 2319
BstDSI	CCRYGG	1 cut(s)	1410
BstF5I	GGATG	3 cut(s)	115, 653, 1876
BstH2I	RGCGCY	3 cut(s)	127, 136, 617
BstHHI	GCGC	5 cut(s)	126, 135, 616, 1098, 2115
BstKTI	GATC	8 cut(s)	379, 571, 582, 817, 856, 1634, 1846, 2053
BstMAI	GTCTC	4 cut(s)	279, 808, 1539, 1598
BstMBI	GATC	8 cut(s)	376, 568, 579, 814, 853, 1631, 1843, 2050
BstMCI	CGRYCG	1 cut(s)	120
BstNI	CCWGG	2 cut(s)	1841, 2064
BstNSI	RCATGY	1 cut(s)	1404
BstPAI	GACNNNNGTC	1 cut(s)	2400
BstSCI	CCNGG	2 cut(s)	1839, 2062
BstSFI	CTRYAG	3 cut(s)	597, 1432, 1758
BstV2I	GAAGAC	2 cut(s)	1698, 2280
BstX2I	RGATCY	3 cut(s)	568, 1843, 2050
BstXI	CCANNNNNNTGG	2 cut(s)	1297, 2099
BstYI	RGATCY	3 cut(s)	568, 1843, 2050
BsuRI	GGCC	5 cut(s)	38, 1188, 1379, 1823, 2062
BtgI	CCRYGG	1 cut(s)	1410
BtgZI	GCGATG	1 cut(s)	1552
BtrI	CACGTC	1 cut(s)	794
BtsCI	GGATG	3 cut(s)	115, 653, 1876
BtsI	GCAGTG	4 cut(s)	606, 1594, 2085, 2381
BtsIMutI	CAGTG	7 cut(s)	372, 606, 1146, 1594, 1792, 2085, 2381
BveI	ACCTGC	1 cut(s)	1081
Cac8I	GCNNGC	6 cut(s)	40, 144, 1344, 1921, 2031, 2319
CfoI	GCGC	5 cut(s)	126, 135, 616, 1098, 2115
Cfr10I	RCCGGY	1 cut(s)	38
Cfr13I	GGNCC	3 cut(s)	427, 859, 955
CseI	GACGC	2 cut(s)	229, 1348
Csp6I	GTAC	6 cut(s)	181, 836, 889, 999, 1830, 1837
CspCI	CAANNNNNGTGG	2 cut(s)	1944, 1979
CviAII	CATG	9 cut(s)	242, 461, 1048, 1401, 1411, 1958, 2116, 2339, 2387
CviQI	GTAC	6 cut(s)	181, 836, 889, 999, 1830, 1837
DpnI	GATC	8 cut(s)	378, 570, 581, 816, 855, 1633, 1845, 2052
DpnII	GATC	8 cut(s)	376, 568, 579, 814, 853, 1631, 1843, 2050
DraI	TTTAAA	1 cut(s)	744
DriI	GACNNNNNGTC	1 cut(s)	70
EaeI	YGGCCR	1 cut(s)	1186
Eam1104I	CTCTTC	2 cut(s)	399, 732
Eam1105I	GACNNNNNGTC	1 cut(s)	70
EarI	CTCTTC	2 cut(s)	399, 732
EciI	GGCGGA	2 cut(s)	41, 2408
Eco130I	CCWWGG	4 cut(s)	518, 951, 1380, 1410
Eco147I	AGGCCT	1 cut(s)	1379
Eco24I	GRGCYC	2 cut(s)	241, 1320
Eco31I	GGTCTC	2 cut(s)	279, 808
Eco32I	GATATC	1 cut(s)	2452
Eco47I	GGWCC	3 cut(s)	427, 859, 955
Eco47III	AGCGCT	2 cut(s)	134, 615
Eco57I	CTGAAG	5 cut(s)	713, 1083, 1332, 2448, 2463
Eco72I	CACGTG	1 cut(s)	1720
Eco88I	CYCGRG	1 cut(s)	52
EcoO109I	RGGNCCY	3 cut(s)	427, 859, 955
EcoRI	GAATTC	1 cut(s)	456
EcoRII	CCWGG	2 cut(s)	1839, 2062
EcoRV	GATATC	1 cut(s)	2452
EcoT14I	CCWWGG	4 cut(s)	518, 951, 1380, 1410
EcoT22I	ATGCAT	1 cut(s)	499
EcoT38I	GRGCYC	2 cut(s)	241, 1320
ErhI	CCWWGG	4 cut(s)	518, 951, 1380, 1410
FaeI	CATG	9 cut(s)	245, 464, 1051, 1404, 1414, 1961, 2119, 2342, 2390
FalI	AAGNNNNNCTT	4 cut(s)	135, 167, 1514, 1546
FaqI	GGGAC	3 cut(s)	440, 845, 2437
FatI	CATG	9 cut(s)	241, 460, 1047, 1400, 1410, 1957, 2115, 2338, 2386
FbaI	TGATCA	1 cut(s)	579
FblI	GTMKAC	1 cut(s)	790
FokI	GGATG	3 cut(s)	122, 660, 1883
FriOI	GRGCYC	2 cut(s)	241, 1320
FspAI	RTGCGCAY	1 cut(s)	2114
FspBI	CTAG	5 cut(s)	359, 519, 818, 1014, 1053
FspI	TGCGCA	1 cut(s)	2114
GlaI	GCGC	5 cut(s)	125, 134, 615, 1097, 2114
GsaI	CCCAGC	1 cut(s)	620
GsuI	CTGGAG	5 cut(s)	157, 303, 562, 942, 2163
HaeII	RGCGCY	3 cut(s)	127, 136, 617
HaeIII	GGCC	5 cut(s)	38, 1188, 1379, 1823, 2062
HapII	CCGG	3 cut(s)	39, 178, 2355
HgaI	GACGC	2 cut(s)	229, 1348
HhaI	GCGC	5 cut(s)	126, 135, 616, 1098, 2115
Hin1II	CATG	9 cut(s)	245, 464, 1051, 1404, 1414, 1961, 2119, 2342, 2390
Hin6I	GCGC	5 cut(s)	124, 133, 614, 1096, 2113
HinP1I	GCGC	5 cut(s)	124, 133, 614, 1096, 2113
HindIII	AAGCTT	2 cut(s)	558, 2303
HpaII	CCGG	3 cut(s)	39, 178, 2355
HphI	GGTGA	7 cut(s)	839, 1085, 1279, 1625, 1626, 2138, 2287
Hpy166II	GTNNAC	4 cut(s)	183, 791, 1221, 2231
Hpy188III	TCNNGA	9 cut(s)	12, 446, 541, 736, 1156, 1310, 1629, 1894, 2180
Hpy8I	GTNNAC	4 cut(s)	183, 791, 1221, 2231
Hpy99I	CGWCG	2 cut(s)	71, 174
HpyAV	CCTTC	5 cut(s)	1307, 1556, 2207, 2325, 2482
HpyCH4III	ACNGT	2 cut(s)	1141, 2501
HpyCH4IV	ACGT	2 cut(s)	793, 1719
HpySE526I	ACGT	2 cut(s)	793, 1719
Hsp92II	CATG	9 cut(s)	245, 464, 1051, 1404, 1414, 1961, 2119, 2342, 2390
HspAI	GCGC	5 cut(s)	124, 133, 614, 1096, 2113
KroI	GCCGGC	1 cut(s)	38
KroNI	GCCGGC	1 cut(s)	40
Ksp22I	TGATCA	1 cut(s)	579
Kzo9I	GATC	8 cut(s)	376, 568, 579, 814, 853, 1631, 1843, 2050
LguI	GCTCTTC	1 cut(s)	399
LmnI	GCTCC	4 cut(s)	1259, 1323, 2182, 2380
LweI	GCATC	7 cut(s)	100, 1237, 1575, 1678, 2065, 2179, 2362
MaeI	CTAG	5 cut(s)	359, 519, 818, 1014, 1053
MaeII	ACGT	2 cut(s)	793, 1719
MalI	GATC	8 cut(s)	378, 570, 581, 816, 855, 1633, 1845, 2052
MbiI	CCGCTC	1 cut(s)	51
MboI	GATC	8 cut(s)	376, 568, 579, 814, 853, 1631, 1843, 2050
MfeI	CAATTG	4 cut(s)	342, 1658, 1902, 2151
MflI	RGATCY	3 cut(s)	568, 1843, 2050
MhlI	GDGCHC	2 cut(s)	241, 1320
MlsI	TGGCCA	1 cut(s)	1188
MluNI	TGGCCA	1 cut(s)	1188
MlyI	GAGTC	7 cut(s)	13, 80, 312, 917, 941, 1128, 1712
MmeI	TCCRAC	2 cut(s)	1111, 2000
Mox20I	TGGCCA	1 cut(s)	1188
Mph1103I	ATGCAT	1 cut(s)	499
MroNI	GCCGGC	1 cut(s)	38
MroXI	GAANNNNTTC	2 cut(s)	360, 1971
MscI	TGGCCA	1 cut(s)	1188
MseI	TTAA	9 cut(s)	743, 843, 878, 1026, 1266, 1454, 1460, 1764, 2106
MslI	CAYNNNNRTG	4 cut(s)	465, 587, 1292, 1295
Msp20I	TGGCCA	1 cut(s)	1188
MspA1I	CMGCKG	1 cut(s)	1226
MspI	CCGG	3 cut(s)	39, 178, 2355
MspR9I	CCNGG	2 cut(s)	1841, 2064
MunI	CAATTG	4 cut(s)	342, 1658, 1902, 2151
Mva1269I	GAATGC	3 cut(s)	166, 1047, 1571
MvaI	CCWGG	2 cut(s)	1841, 2064
NaeI	GCCGGC	1 cut(s)	40
NcoI	CCATGG	1 cut(s)	1410
NdeII	GATC	8 cut(s)	376, 568, 579, 814, 853, 1631, 1843, 2050
NgoMIV	GCCGGC	1 cut(s)	38
NlaIII	CATG	9 cut(s)	245, 464, 1051, 1404, 1414, 1961, 2119, 2342, 2390
NlaIV	GGNNCC	8 cut(s)	428, 861, 957, 1261, 1319, 1450, 1845, 2052
NmuCI	GTSAC	5 cut(s)	367, 412, 1285, 2119, 2126
NsbI	TGCGCA	1 cut(s)	2114
NsiI	ATGCAT	1 cut(s)	499
NspI	RCATGY	1 cut(s)	1404
OliI	CACNNNNGTG	1 cut(s)	1292
PaqCI	CACCTGC	1 cut(s)	1081
PceI	AGGCCT	1 cut(s)	1379
PciSI	GCTCTTC	1 cut(s)	399
PcsI	WCGNNNNNNNCGW	1 cut(s)	1927
PctI	GAATGC	3 cut(s)	166, 1047, 1571
PdiI	GCCGGC	1 cut(s)	40
PdmI	GAANNNNTTC	2 cut(s)	360, 1971
PfeI	GAWTC	3 cut(s)	174, 1665, 2183
PflFI	GACNNNGTC	1 cut(s)	2021
PflMI	CCANNNNNTGG	1 cut(s)	1982
PleI	GAGTC	7 cut(s)	12, 79, 311, 916, 941, 1128, 1711
PmaCI	CACGTG	1 cut(s)	1720
PmlI	CACGTG	1 cut(s)	1720
PpsI	GAGTC	7 cut(s)	12, 79, 311, 916, 941, 1128, 1711
Ppu21I	YACGTR	1 cut(s)	1720
PpuMI	RGGWCCY	3 cut(s)	427, 859, 955
PshAI	GACNNNNGTC	1 cut(s)	2400
PshBI	ATTAAT	1 cut(s)	1026
Psp5II	RGGWCCY	3 cut(s)	427, 859, 955
Psp6I	CCWGG	2 cut(s)	1839, 2062
PspCI	CACGTG	1 cut(s)	1720
PspFI	CCCAGC	1 cut(s)	616
PspGI	CCWGG	2 cut(s)	1839, 2062
PspN4I	GGNNCC	8 cut(s)	428, 861, 957, 1261, 1319, 1450, 1845, 2052
PspPI	GGNCC	3 cut(s)	427, 859, 955
PspPPI	RGGWCCY	3 cut(s)	427, 859, 955
PstI	CTGCAG	3 cut(s)	601, 1436, 1762
PsuI	RGATCY	3 cut(s)	568, 1843, 2050
PsyI	GACNNNGTC	1 cut(s)	2021
RsaI	GTAC	6 cut(s)	182, 837, 890, 1000, 1831, 1838
RsaNI	GTAC	6 cut(s)	181, 836, 889, 999, 1830, 1837
RseI	CAYNNNNRTG	4 cut(s)	465, 587, 1292, 1295
SapI	GCTCTTC	1 cut(s)	399
SaqAI	TTAA	9 cut(s)	743, 843, 878, 1026, 1266, 1454, 1460, 1764, 2106
Sau3AI	GATC	8 cut(s)	376, 568, 579, 814, 853, 1631, 1843, 2050
Sau96I	GGNCC	3 cut(s)	427, 859, 955
SchI	GAGTC	7 cut(s)	13, 80, 312, 917, 941, 1128, 1712
ScrFI	CCNGG	2 cut(s)	1841, 2064
SduI	GDGCHC	2 cut(s)	241, 1320
SfaNI	GCATC	7 cut(s)	100, 1237, 1575, 1678, 2065, 2179, 2362
SfcI	CTRYAG	3 cut(s)	597, 1432, 1758
SinI	GGWCC	3 cut(s)	427, 859, 955
SmiI	ATTTAAAT	1 cut(s)	744
SmiMI	CAYNNNNRTG	4 cut(s)	465, 587, 1292, 1295
SmlI	CTYRAG	1 cut(s)	128
SmoI	CTYRAG	1 cut(s)	128
SpeI	ACTAGT	2 cut(s)	358, 1013
SseBI	AGGCCT	1 cut(s)	1379
SspMI	CTAG	5 cut(s)	359, 519, 818, 1014, 1053
StuI	AGGCCT	1 cut(s)	1379
StyD4I	CCNGG	2 cut(s)	1839, 2062
StyI	CCWWGG	4 cut(s)	518, 951, 1380, 1410
SwaI	ATTTAAAT	1 cut(s)	744
TaaI	ACNGT	2 cut(s)	1141, 2501
TaiI	ACGT	2 cut(s)	796, 1722
TaqI	TCGA	6 cut(s)	11, 120, 172, 447, 506, 911
TaqII	GACCGA	1 cut(s)	106
TatI	WGTACW	1 cut(s)	1829
TauI	GCSGC	4 cut(s)	45, 51, 149, 1919
TfiI	GAWTC	3 cut(s)	174, 1665, 2183
Tru1I	TTAA	9 cut(s)	743, 843, 878, 1026, 1266, 1454, 1460, 1764, 2106
Tru9I	TTAA	9 cut(s)	743, 843, 878, 1026, 1266, 1454, 1460, 1764, 2106
TscAI	CASTG	7 cut(s)	372, 606, 1146, 1594, 1799, 2085, 2388
TseFI	GTSAC	5 cut(s)	367, 412, 1285, 2119, 2126
Tsp45I	GTSAC	5 cut(s)	367, 412, 1285, 2119, 2126
TspDTI	ATGAA	6 cut(s)	449, 1108, 1694, 1775, 1974, 2519
TspGWI	ACGGA	2 cut(s)	502, 2216
TspRI	CASTG	7 cut(s)	372, 606, 1146, 1594, 1799, 2085, 2388
Tth111I	GACNNNGTC	1 cut(s)	2021
Van91I	CCANNNNNTGG	1 cut(s)	1982
VpaK11BI	GGWCC	3 cut(s)	427, 859, 955
VspI	ATTAAT	1 cut(s)	1026
XapI	RAATTY	5 cut(s)	456, 739, 1238, 1681, 1887
XceI	RCATGY	1 cut(s)	1404
XcmI	CCANNNNNNNNNTGG	1 cut(s)	296
XmaJI	CCTAGG	1 cut(s)	518
XmiI	GTMKAC	1 cut(s)	790
XmnI	GAANNNNTTC	2 cut(s)	360, 1971
XspI	CTAG	5 cut(s)	359, 519, 818, 1014, 1053
Zsp2I	ATGCAT	1 cut(s)	499

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.