pycom14g07760

Ferredoxin-dependent glutamate synthase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
8030178 .. 8036202
6025 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g07760.5

Sequence Viewer

Length: 1560 bp
ATGTATTCTCATTCTCCAATACTGTTAGATATTATCTCTTCCGCTGCGGACATTTCTATTATTTTACAAGCATATGCTTGCATGGTACCAGGGGCATTTGGCTACTCCAGTGAGGATGTACAAATGGTTATTGAGACTATGGCTTCACAAGGGAAGGAGCCAACATTTTGTATGGGTGACGATATTCCATTGGCAATATTATCTCAGAGGTCTCATATGCTTTATGACTATTTCAAGCAACGGTTTGCACAGGTTACAAATCCAGCCATTGATCCTCTTCGAGAAGGTTTAGTTATGTCTCTTGAAATCAACATCGGAAAGCGACAAAATATTTTGGAGGTTGGACCTGAAAATGCATCGCAGGTTATCTTGTCTAGTCCTGTGCTGAATGAAGGAGAACTTGATTTGTTGCTAAAGGATGTGAAGTTGAAACCCCAAGTTTTACCTACATTTTTTGATATCCATAAAGGGGTTGATGGTTCCTTGGAAAAGACTCTATATAGGCTTTGTGAAGCTGCTGATGAAGCTGTTCAAAATGGTTGCCAACTGCTTGTGCTTTCTGATCGGGCTGATGAGCTGGAGGCAACTAGACCTGCAATTCCCATCCTTCTTGCTGTTGGTGCTGTTCATCAGCATCTTATTCAAAATGGCTTGCGAATGTCAGCTTCTATCATAGTAGACACTGCTCAGTGTTTTAGCACTCACCAGTTTGCCTGCCTGATTGGATATGGTGCAAGGCTGTTAAAGCTGGTCTTCTTAAAATTCTTTCCAAAATGGGCATTTCGTTGCTTTCAAGGGGAGTATCATGGAAACAACCCAGAGATGTCAAAATTGCTCCACAAAGCTGTCCGCCAAAAAAATGAAAGTGCTTTTTCAGTTTATCAACAGCATTTAGCTAACCGACCTGTAAATGTTCTTCGTGATCTTGTTGAGTTCAAAAGTGATCGTACTCCAATTCCTGTTGGAAAAGTTGAACCTGCTGTATCCATTGTTCAACGGTTCTGCACTGGTGGGATGTCACTTGGAGCTATTTCAAGAGAAACTCACGAGGCTATTGCCGTTGCAATGAATAGAATAGGTGGAAAGTCCAATTCTGGAGAAGGTGGTGAGGTTGCTTCAGGACGTTTTGGTGTCACTCCAACCTTCTTGGTCAACGCTGATCAGCTAGAAATTAAAATTGCACAAGGTGCGAAGCCCGGTGAAGGTGGCCAATTGCCTGGTAAAAAAGTCAGTGCATATATTGCGAGGTTGAGAAATTCTAAACCAGGGGTTCCACTTATATCTCCACCTCCACACCATGACATTTATTCCATAGAGGATCTTGCCCAATTGATCGATGATCTTCATCAGGTTATACTTGATGTGAACCCTAATGCTAAGGTGTCAGTAAAGCTTGTGGCAGAAGCTGGAATTGGCACTGTAGCTTCTGGTGTTGCAAAGGGTAATGCTGATGTCATTCAGGTACTTATCGTATATCCGGAATTGGCACTGAATGAGTATGTTTGTGTACTGAGCAGGATGATAATTTTGATGGCTAGCTTCTCTGTGCTTTTTATGTAG

Protein Analysis

520

Amino Acids

56.51

Weight (kDa)

6.03

Isoelectric Point (pI)

35.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 352, 601, 985
Acc65I GGTACC 1 cut(s) 85
AccB1I GGYRCC 1 cut(s) 85
AccI GTMKAC 1 cut(s) 678
AccIII TCCGGA 1 cut(s) 1477
AciI CCGC 3 cut(s) 42, 47, 850
AclWI GGATC 2 cut(s) 266, 1326
AcoI YGGCCR 1 cut(s) 1207
AcsI RAATTY 2 cut(s) 761, 1255
AcuI CTGAAG 1 cut(s) 1101
AdeI CACNNNGTG 1 cut(s) 1187
AfaI GTAC 5 cut(s) 87, 120, 949, 1464, 1509
AfiI CCNNNNNNNGG 2 cut(s) 469, 1202
AjnI CCWGG 3 cut(s) 88, 1216, 1264
AjuI GAANNNNNNNTTGG 2 cut(s) 1395, 1427
Alw26I GTCTC 3 cut(s) 128, 216, 303
AlwI GGATC 2 cut(s) 266, 1326
AlwNI CAGNNNCTG 1 cut(s) 1406
Aor13HI TCCGGA 1 cut(s) 1477
AoxI GGCC 1 cut(s) 1207
ApeKI GCWGC 2 cut(s) 44, 515
ApoI RAATTY 2 cut(s) 761, 1255
Asp700I GAANNNNTTC 1 cut(s) 528
Asp718I GGTACC 1 cut(s) 85
AspS9I GGNCC 1 cut(s) 344
AsuC2I CCSGG 1 cut(s) 1197
AsuHPI GGTGA 4 cut(s) 188, 695, 1118, 1211
AsuNHI GCTAGC 1 cut(s) 1535
AvaII GGWCC 1 cut(s) 344
BalI TGGCCA 1 cut(s) 1209
BanI GGYRCC 1 cut(s) 85
BarI GAAGNNNNNNTAC 2 cut(s) 900, 932
BauI CACGAG 1 cut(s) 1046
BbsI GAAGAC 1 cut(s) 745
BbvI GCAGC 2 cut(s) 31, 502
BccI CCATC 3 cut(s) 470, 611, 1525
BceAI ACGGC 1 cut(s) 1043
BcgI CGANNNNNNTGC 2 cut(s) 1037, 1071
BciT130I CCWGG 3 cut(s) 90, 1218, 1266
BciVI GTATCC 1 cut(s) 994
BclI TGATCA 1 cut(s) 1159
BcnI CCSGG 1 cut(s) 1197
BcoDI GTCTC 3 cut(s) 128, 216, 303
BfaI CTAG 4 cut(s) 375, 588, 1166, 1536
BfmI CTRYAG 1 cut(s) 1419
BfuAI ACCTGC 3 cut(s) 352, 601, 985
BfuI GTATCC 1 cut(s) 994
BisI GCNGC 2 cut(s) 45, 516
BlsI GCNGC 2 cut(s) 46, 517
Bme1390I CCNGG 4 cut(s) 90, 1197, 1218, 1266
Bme18I GGWCC 1 cut(s) 344
BmgT120I GGNCC 1 cut(s) 344
BmiI GGNNCC 4 cut(s) 87, 159, 481, 1272
BmrFI CCNGG 4 cut(s) 90, 1197, 1218, 1266
BmsI GCATC 2 cut(s) 365, 643
BmtI GCTAGC 1 cut(s) 1539
BpiI GAAGAC 1 cut(s) 745
BpmI CTGGAG 3 cut(s) 91, 599, 1116
Bpu10I CCTNAGC 1 cut(s) 1377
BpuMI CCSGG 1 cut(s) 1197
Bsa29I ATCGAT 1 cut(s) 1335
BsaBI GATNNNNATC 1 cut(s) 1344
BsaI GGTCTC 1 cut(s) 216
BsaJI CCNNGG 3 cut(s) 89, 483, 1265
BsaWI WCCGGW 1 cut(s) 1477
Bsc4I CCNNNNNNNGG 2 cut(s) 469, 1202
Bse1I ACTGG 3 cut(s) 108, 706, 1012
Bse3DI GCAATG 1 cut(s) 1071
Bse8I GATNNNNATC 1 cut(s) 1344
BseAI TCCGGA 1 cut(s) 1477
BseBI CCWGG 3 cut(s) 90, 1218, 1266
BseCI ATCGAT 1 cut(s) 1335
BseDI CCNNGG 3 cut(s) 89, 483, 1265
BseGI GGATG 5 cut(s) 121, 424, 603, 1020, 1524
BseJI GATNNNNATC 1 cut(s) 1344
BseLI CCNNNNNNNGG 2 cut(s) 469, 1202
BseMI GCAATG 1 cut(s) 1071
BseMII CTCAG 3 cut(s) 218, 701, 1502
BseNI ACTGG 3 cut(s) 108, 706, 1012
BseXI GCAGC 2 cut(s) 31, 502
BsgI GTGCAG 1 cut(s) 988
BshFI GGCC 1 cut(s) 1209
BshNI GGYRCC 1 cut(s) 85
BshVI ATCGAT 1 cut(s) 1335
BsiSI CCGG 2 cut(s) 1197, 1478
BslI CCNNNNNNNGG 2 cut(s) 469, 1202
BsmAI GTCTC 3 cut(s) 128, 216, 303
BsnI GGCC 1 cut(s) 1209
Bso31I GGTCTC 1 cut(s) 216
Bsp13I TCCGGA 1 cut(s) 1477
Bsp1407I TGTACA 1 cut(s) 118
Bsp143I GATC 8 cut(s) 271, 562, 922, 943, 1159, 1318, 1332, 1339
BspACI CCGC 3 cut(s) 42, 47, 850
BspANI GGCC 1 cut(s) 1209
BspCNI CTCAG 3 cut(s) 217, 700, 1503
BspDI ATCGAT 1 cut(s) 1335
BspEI TCCGGA 1 cut(s) 1477
BspLI GGNNCC 4 cut(s) 87, 159, 481, 1272
BspMI ACCTGC 3 cut(s) 352, 601, 985
BspOI GCTAGC 1 cut(s) 1539
BspPI GGATC 2 cut(s) 266, 1326
BspT107I GGYRCC 1 cut(s) 85
BspTNI GGTCTC 1 cut(s) 216
BsrDI GCAATG 1 cut(s) 1071
BsrGI TGTACA 1 cut(s) 118
BsrI ACTGG 3 cut(s) 108, 706, 1012
BssECI CCNNGG 3 cut(s) 89, 483, 1265
BssMI GATC 8 cut(s) 271, 562, 922, 943, 1159, 1318, 1332, 1339
BssSI CACGAG 1 cut(s) 1046
BssT1I CCWWGG 1 cut(s) 483
Bst2BI CACGAG 1 cut(s) 1046
Bst2UI CCWGG 3 cut(s) 90, 1218, 1266
Bst4CI ACNGT 4 cut(s) 24, 243, 999, 1420
Bst6I CTCTTC 2 cut(s) 43, 282
BstAPI GCANNNNNTGC 2 cut(s) 1187, 1241
BstAUI TGTACA 1 cut(s) 118
BstC8I GCNNGC 4 cut(s) 79, 653, 715, 1537
BstDEI CTNAG 4 cut(s) 204, 687, 1377, 1511
BstF5I GGATG 5 cut(s) 121, 424, 603, 1020, 1524
BstKTI GATC 8 cut(s) 274, 565, 925, 946, 1162, 1321, 1335, 1342
BstMAI GTCTC 3 cut(s) 128, 216, 303
BstMBI GATC 8 cut(s) 271, 562, 922, 943, 1159, 1318, 1332, 1339
BstMWI GCNNNNNNNGC 5 cut(s) 524, 620, 745, 1187, 1241
BstNI CCWGG 3 cut(s) 90, 1218, 1266
BstSCI CCNGG 4 cut(s) 88, 1195, 1216, 1264
BstSFI CTRYAG 1 cut(s) 1419
BstV1I GCAGC 2 cut(s) 31, 502
BstV2I GAAGAC 1 cut(s) 745
BstX2I RGATCY 1 cut(s) 1318
BstXI CCANNNNNNTGG 1 cut(s) 1217
BstYI RGATCY 1 cut(s) 1318
Bsu15I ATCGAT 1 cut(s) 1335
BsuI GTATCC 1 cut(s) 994
BsuRI GGCC 1 cut(s) 1209
BsuTUI ATCGAT 1 cut(s) 1335
BtgZI GCGATG 1 cut(s) 342
BtsCI GGATG 5 cut(s) 121, 424, 603, 1020, 1524
BtsI GCAGTG 1 cut(s) 681
BtsIMutI CAGTG 7 cut(s) 115, 681, 695, 1005, 1237, 1416, 1487
BveI ACCTGC 3 cut(s) 352, 601, 985
Cac8I GCNNGC 4 cut(s) 79, 653, 715, 1537
CaiI CAGNNNCTG 1 cut(s) 1406
Cfr13I GGNCC 1 cut(s) 344
ClaI ATCGAT 1 cut(s) 1335
Csp6I GTAC 5 cut(s) 86, 119, 948, 1463, 1508
CviAII CATG 3 cut(s) 82, 806, 1298
CviQI GTAC 5 cut(s) 86, 119, 948, 1463, 1508
DdeI CTNAG 4 cut(s) 204, 687, 1377, 1511
DpnI GATC 8 cut(s) 273, 564, 924, 945, 1161, 1320, 1334, 1341
DpnII GATC 8 cut(s) 271, 562, 922, 943, 1159, 1318, 1332, 1339
DraIII CACNNNGTG 1 cut(s) 1187
EaeI YGGCCR 1 cut(s) 1207
Eam1104I CTCTTC 2 cut(s) 43, 282
EarI CTCTTC 2 cut(s) 43, 282
EciI GGCGGA 1 cut(s) 839
Eco130I CCWWGG 1 cut(s) 483
Eco31I GGTCTC 1 cut(s) 216
Eco32I GATATC 1 cut(s) 460
Eco47I GGWCC 1 cut(s) 344
Eco57I CTGAAG 1 cut(s) 1101
EcoRII CCWGG 3 cut(s) 88, 1216, 1264
EcoRV GATATC 1 cut(s) 460
EcoT14I CCWWGG 1 cut(s) 483
EcoT22I ATGCAT 1 cut(s) 358
ErhI CCWWGG 1 cut(s) 483
FaeI CATG 3 cut(s) 85, 809, 1301
FalI AAGNNNNNCTT 4 cut(s) 384, 416, 737, 769
FatI CATG 3 cut(s) 81, 805, 1297
FauNDI CATATG 2 cut(s) 73, 216
FbaI TGATCA 1 cut(s) 1159
FblI GTMKAC 1 cut(s) 678
Fnu4HI GCNGC 2 cut(s) 45, 516
FokI GGATG 5 cut(s) 128, 431, 590, 1027, 1531
Fsp4HI GCNGC 2 cut(s) 45, 516
FspBI CTAG 4 cut(s) 375, 588, 1166, 1536
GluI GCNGC 2 cut(s) 45, 516
GsuI CTGGAG 3 cut(s) 91, 599, 1116
HaeIII GGCC 1 cut(s) 1209
HapII CCGG 2 cut(s) 1197, 1478
Hin1II CATG 3 cut(s) 85, 809, 1301
HincII GTYRAC 1 cut(s) 1153
HindII GTYRAC 1 cut(s) 1153
HindIII AAGCTT 1 cut(s) 1391
HinfI GANTC 1 cut(s) 493
HpaII CCGG 2 cut(s) 1197, 1478
HphI GGTGA 4 cut(s) 188, 695, 1118, 1211
Hpy166II GTNNAC 4 cut(s) 679, 1153, 1366, 1508
Hpy188I TCNGA 3 cut(s) 207, 317, 562
Hpy188III TCNNGA 8 cut(s) 281, 302, 920, 1035, 1046, 1095, 1119, 1478
Hpy8I GTNNAC 4 cut(s) 679, 1153, 1366, 1508
HpyAV CCTTC 7 cut(s) 148, 278, 386, 617, 1094, 1153, 1196
HpyCH4III ACNGT 4 cut(s) 24, 243, 999, 1420
HpyCH4IV ACGT 1 cut(s) 1123
HpyF10VI GCNNNNNNNGC 5 cut(s) 524, 620, 745, 1187, 1241
HpyF3I CTNAG 4 cut(s) 204, 687, 1377, 1511
HpySE526I ACGT 1 cut(s) 1123
Hsp92II CATG 3 cut(s) 85, 809, 1301
Kpn2I TCCGGA 1 cut(s) 1477
KpnI GGTACC 1 cut(s) 89
Ksp22I TGATCA 1 cut(s) 1159
Kzo9I GATC 8 cut(s) 271, 562, 922, 943, 1159, 1318, 1332, 1339
LmnI GCTCC 3 cut(s) 157, 840, 1025
Lsp1109I GCAGC 2 cut(s) 31, 502
LweI GCATC 2 cut(s) 365, 643
MaeI CTAG 4 cut(s) 375, 588, 1166, 1536
MaeII ACGT 1 cut(s) 1123
MaeIII GTNAC 4 cut(s) 176, 253, 1017, 1132
MalI GATC 8 cut(s) 273, 564, 924, 945, 1161, 1320, 1334, 1341
MboI GATC 8 cut(s) 271, 562, 922, 943, 1159, 1318, 1332, 1339
MboII GAAGA 5 cut(s) 30, 269, 745, 908, 1334
MfeI CAATTG 2 cut(s) 1211, 1328
MflI RGATCY 1 cut(s) 1318
MlsI TGGCCA 1 cut(s) 1209
MluNI TGGCCA 1 cut(s) 1209
MlyI GAGTC 1 cut(s) 487
MmeI TCCRAC 3 cut(s) 322, 943, 1163
Mox20I TGGCCA 1 cut(s) 1209
Mph1103I ATGCAT 1 cut(s) 358
MroI TCCGGA 1 cut(s) 1477
MroXI GAANNNNTTC 1 cut(s) 528
MscI TGGCCA 1 cut(s) 1209
MseI TTAA 3 cut(s) 743, 758, 1173
Msp20I TGGCCA 1 cut(s) 1209
MspA1I CMGCKG 1 cut(s) 44
MspI CCGG 2 cut(s) 1197, 1478
MspR9I CCNGG 4 cut(s) 90, 1197, 1218, 1266
MunI CAATTG 2 cut(s) 1211, 1328
MvaI CCWGG 3 cut(s) 90, 1218, 1266
MwoI GCNNNNNNNGC 5 cut(s) 524, 620, 745, 1187, 1241
NciI CCSGG 1 cut(s) 1197
NdeI CATATG 2 cut(s) 73, 216
NdeII GATC 8 cut(s) 271, 562, 922, 943, 1159, 1318, 1332, 1339
NheI GCTAGC 1 cut(s) 1535
NlaIII CATG 3 cut(s) 85, 809, 1301
NlaIV GGNNCC 4 cut(s) 87, 159, 481, 1272
NmuCI GTSAC 3 cut(s) 176, 1017, 1132
NsiI ATGCAT 1 cut(s) 358
PdmI GAANNNNTTC 1 cut(s) 528
PkrI GCNGC 2 cut(s) 46, 517
PleI GAGTC 1 cut(s) 487
PpsI GAGTC 1 cut(s) 487
Psp6I CCWGG 3 cut(s) 88, 1216, 1264
PspGI CCWGG 3 cut(s) 88, 1216, 1264
PspN4I GGNNCC 4 cut(s) 87, 159, 481, 1272
PspPI GGNCC 1 cut(s) 344
PsrI GAACNNNNNNTAC 2 cut(s) 975, 1007
PstNI CAGNNNCTG 1 cut(s) 1406
PsuI RGATCY 1 cut(s) 1318
RsaI GTAC 5 cut(s) 87, 120, 949, 1464, 1509
RsaNI GTAC 5 cut(s) 86, 119, 948, 1463, 1508
SaqAI TTAA 3 cut(s) 743, 758, 1173
SatI GCNGC 2 cut(s) 45, 516
Sau3AI GATC 8 cut(s) 271, 562, 922, 943, 1159, 1318, 1332, 1339
Sau96I GGNCC 1 cut(s) 344
SchI GAGTC 1 cut(s) 487
ScrFI CCNGG 4 cut(s) 90, 1197, 1218, 1266
SfaNI GCATC 2 cut(s) 365, 643
SfcI CTRYAG 1 cut(s) 1419
SinI GGWCC 1 cut(s) 344
SsiI CCGC 3 cut(s) 42, 47, 850
SspI AATATT 2 cut(s) 198, 331
SspMI CTAG 4 cut(s) 375, 588, 1166, 1536
StyD4I CCNGG 4 cut(s) 88, 1195, 1216, 1264
StyI CCWWGG 1 cut(s) 483
TaaI ACNGT 4 cut(s) 24, 243, 999, 1420
TaiI ACGT 1 cut(s) 1126
TaqI TCGA 2 cut(s) 280, 1335
TatI WGTACW 2 cut(s) 118, 1507
Tru1I TTAA 3 cut(s) 743, 758, 1173
Tru9I TTAA 3 cut(s) 743, 758, 1173
TscAI CASTG 7 cut(s) 115, 688, 695, 1012, 1237, 1423, 1494
TseFI GTSAC 3 cut(s) 176, 1017, 1132
TseI GCWGC 2 cut(s) 44, 515
Tsp45I GTSAC 3 cut(s) 176, 1017, 1132
TspDTI ATGAA 6 cut(s) 405, 537, 617, 876, 1082, 1334
TspRI CASTG 7 cut(s) 115, 688, 695, 1012, 1237, 1423, 1494
VpaK11BI GGWCC 1 cut(s) 344
XapI RAATTY 2 cut(s) 761, 1255
XmiI GTMKAC 1 cut(s) 678
XmnI GAANNNNTTC 1 cut(s) 528
XspI CTAG 4 cut(s) 375, 588, 1166, 1536
Zsp2I ATGCAT 1 cut(s) 358
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.