pycom15g12200

DNA excision repair protein ERCC-6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0003840
Physical Location & Seq
Reverse (-)
8303775 .. 8313325
9551 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3060 bp
ATGGCGGAGAGGAAAGGCGGCAAAAAACCAGAGAGTCTAAACGACAGCCACTATCGCCTCCTTCAAGACCTCCTCTCTCCTGCTGCTGCTGCTGCTGCTGCCAATCCTTCTTCCACACCCGCCGCAGAGGGCGATAAAGTGGAAATGGAGGAGGTGAAGCCACCGATCGAAGGCCAATGGGTTCACAACCTTCCTCATTTCTCACTCGCTGATTTTGATTCTTCTCCTGAAGAAGAAAAACCTTCAAAGGTTAAGATTGAAGGTAGACGCCGTCTCTGTAAAGTTTCTTATGGGGCCGACAGTGATCATGCTGACAAACAACCAGTGCTTGATGAGCCCAACGTTTTTGGCATTGCTGGTTATGAATCACCGGCAGTGCCGAAAAGAAATCCGAGTAGGACTAGTGCCAATGCTGGCGGGAGTGAGATTAGGGATATTCTTGATGACTTGAGCTCGAGGCTTGAGTTTCTGTCAATTGAGAGGAGGGGTGCTAGAAAAGCGGACATGGTTGAAGGTTCTAATGTGTCTAAAACCAAAGGCAAGGAGGCAGATGCTTATTTGCCGAGTGAACCTCAAGGAGGCAGCCTGCCTACGAAACATGATGGTCAAAAGAAAAGAGAAACTTTATGGGTGGATGAAAAACCAAAAACCGTGGCCCGTCCCCTTGTTCCTAAAGTGGGAAAAAGAGAGGTTGGTGATGAGGATGGCTGTGTATTTTTGAGTGACAATAAGATAGTTAAAGAATCAGGGAGGCAGAGTGGTAATGTTAAAGAGCGCTATGAATCTGATGAGCTTATTGTGATCGATGATTCTACTGATGATTGTGCTCTAGCGACTGATGGTTCTATTACTCTGAATGGTCTCACATCTACTTACAAGTTGCCTGGGAAGATTGCGACGATGTTGTTTCCCCATCAGCGTGATGGCATAAAGTGGCTATGGTCTTTGCATTGTCAGGGAAAGGGTGGAATCTTAGGTGATGACATGGGCTTGGGAAAAACAATGCAGATTTGCAGCTTCTTAGCAGGATTATTTCATTCACGGTTGACTAAAAGAGTTATGCTTGTGGCCCCTAAAACACTGCTTTCCCATTGGATTAAAGAATTATCATCTGTGGGTCTCACTGACAAGATAAGAGAATACTATGGGACTTGCGCTAAAGCACGAAAATATGAGCTTCAGTATGTACTTCAGGACAAAGGCATTCTTCTCACAACTTATGATATTGTGCGGGTTAACTCAAAATCTTTAAGAGGGGATGACTATGTTCATGATGATGGAAGGGAAGATATCATATGGGATTATATGATACTTGATGAGGGGCATCTCATAAAGAACCCTAGTACACAAAGAGCCAAAAGTTTGCTTGAGATACCTTGTGCCCATCGCATTATTGTTAGCGGCACGCCATTGCAAAATAATCTGAAGGAGCTGTGGGCCTTATTCAACTTCTGTTGCCCTGAGCTACTGGGTGATAAGAAATGTTTTAAGGAACAGTTTGAGTCTCTCATTCTTCGTGGAAATGAGAAAAATGCTTCGGATAGGGAAAAGCATATTGGTTCAACGGTTGCGAAGGAACTAAGAGAACGTATTAAACCTTTTTTTCTGCGTCGCTTAAAGAACGAGGTATTTAATGAAGACAGTGACCAAACAAGTGCCAAACTTTCTAAAAAGAATGAAATCATTGTTTGGTTGAGATTGACCGGCTGTCAGCGGAAACTTTATGAAGCTTTTCTAAAGAGTGAGCTGGTTCTTTCTGCTTTTGATGGCTCTCCGTTGGCTGCACTTACGATCCTGAAGAAAATATGTGATCATCCACTTCTATTGACAAAGCGAGCAGCTGAAGATGTACTAGAAGAGATGGATTCAATGTTAAAGCCAGATGAAACTTGCATGGCAGAAAAATTGGCAATGTACATTGCCGATGTTGCTGAGAGAGAGGAGGACTTTGATGAAAAGCATGCCAACCTGTCATGCAAAATATCTTTTATATTGTCTTTACTGGAAAACTTAATTCCTCAGGGGCATAATGTTCTTATCTTCTCTCAAACTCGAAAGATGCTTAATCTTATTCAGGAATCACTAGTATCCCATGGTTACAAGTTCGTACGCATTGATGGAACCACAAAAGCTATTGACAGAATGACGGTTGTTAATGATTTCCAAGAAGGTAATGGAGCTCCCATATTTCTCCTGACATCTCAAGTAGGTGGTTTGGGCCTCACGCTTACAAGAGCAGATCGATTGACTTTAGTGGTTGATCCTGCTTGGAACCCAAGTACAGATAACCAAAGCGTGGATCGTGCATATCGAATTGGACAAAATAAGGATGTCATTGTATACAGATTAATGACTTGTGGGACTGTTGAAGAAAAGATATACAGAAAACAGATATACAAGGGCGGATTGTTTAAAACTGCAACCGAGCATAAAGAACAGATTCGGTACTTTAGTCAGCAGGATCTTCGTGAACTTTTCAGTCTCCCAAAAGAAGGTTTTGATGTATCCCTTACGCAGCAGCAACTTTATGAGGAGCACGATCGCCAGCACACAATGGACAAGTACTTCAAGTCCCATATCGAGTTCTTGGAAACTCAAGGTATAGGAGGAGTCAGTCATCACAGTTTACTCTTCTCCAAGACAGCACCTCTACCTGTCGCCGTAGGGGTAGAAGAGGAAGTTGAAAGAATCAGAGGATCTTCAACAGCGGGAAGTTCATTTTCAAGTTCTTTACAAGAACGCAATGTGAATGGGGCTGAATATGCTTTCAAGCCAAAGGATGTAAACATAAACAAGAAGCCTTCTTCACCTATTGACGCGGATAAATTGACAGAATCAGAGATTAAACAGAGAATCAACAGGCTGTCACAAACTCTTGCAAATAAGGCAATAGTTTCAAGATTACCAGATAAGGGGGAGAAAATACAAAAGCAAATTGGTGAACTGAATGCGGAGCTTTATAGACTTGGAAAAGTGGAAGCGCAAGGAAATGAGAGAAATGTCATCGACTTGGAACTGAATGATGATATAACTGGGGAGTTCCAAAGAGTGATGATATAA

Protein Analysis

1020

Amino Acids

114.35

Weight (kDa)

6.29

Isoelectric Point (pI)

38.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 302 - 470 3.4e-07 Type III restriction enzyme, res subunit
SNF2-rel_dom PF00176 305 - 606 2.7e-61 SNF2-related domain
AAA_34 PF13872 321 - 451 8.6e-06 P-loop containing NTP hydrolase pore-1
Helicase_C PF00271 664 - 773 2.3e-18 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 2296
AccI GTMKAC 2 cut(s) 265, 2340
AccII CGCG 1 cut(s) 2819
AclI AACGTT 1 cut(s) 342
AclWI GGATC 5 cut(s) 1786, 2255, 2307, 2469, 2704
AcuI CTGAAG 6 cut(s) 249, 1163, 1175, 1445, 1817, 1863
AcyI GRCGYC 1 cut(s) 268
AfaI GTAC 8 cut(s) 1188, 1345, 1851, 1916, 2109, 2281, 2447, 2564
AfeI AGCGCT 1 cut(s) 776
AfiI CCNNNNNNNGG 6 cut(s) 170, 578, 677, 2296, 2492, 2912
AhdI GACNNNNNGTC 1 cut(s) 1707
AhlI ACTAGT 2 cut(s) 401, 2083
AjnI CCWGG 1 cut(s) 883
AjuI GAANNNNNNNTTGG 2 cut(s) 1539, 1571
Alw21I GWGCWC 4 cut(s) 455, 829, 2182, 2538
Alw26I GTCTC 5 cut(s) 278, 866, 1124, 1509, 2486
AlwI GGATC 5 cut(s) 1786, 2255, 2307, 2469, 2704
Ama87I CYCGRG 1 cut(s) 454
Aor51HI AGCGCT 1 cut(s) 776
AoxI GGCC 6 cut(s) 172, 294, 654, 1068, 1437, 2218
AseI ATTAAT 1 cut(s) 2348
Asp700I GAANNNNTTC 2 cut(s) 1731, 2439
AspLEI GCGC 3 cut(s) 777, 1157, 2983
AspS9I GGNCC 5 cut(s) 294, 655, 1069, 1437, 2218
AsuHPI GGTGA 7 cut(s) 166, 360, 707, 989, 1484, 2799, 2951
AvaI CYCGRG 1 cut(s) 454
AxyI CCTNAGG 1 cut(s) 2019
BaeGI GKGCMC 1 cut(s) 1384
BaeI ACNNNNGTAYC 2 cut(s) 2437, 2470
BanII GRGCYC 3 cut(s) 339, 455, 2182
BbsI GAAGAC 1 cut(s) 1644
Bbv12I GWGCWC 4 cut(s) 455, 829, 2182, 2538
BceAI ACGGC 2 cut(s) 255, 2645
BcgI CGANNNNNNTGC 2 cut(s) 2447, 2481
BciT130I CCWGG 1 cut(s) 885
BciVI GTATCC 2 cut(s) 2098, 2515
BclI TGATCA 2 cut(s) 304, 1810
BcoDI GTCTC 5 cut(s) 278, 866, 1124, 1509, 2486
BcuI ACTAGT 2 cut(s) 401, 2083
BfaI CTAG 6 cut(s) 402, 492, 830, 1341, 1853, 2084
BfoI RGCGCY 1 cut(s) 778
BfuI GTATCC 2 cut(s) 2098, 2515
BmcAI AGTACT 1 cut(s) 2564
Bme1390I CCNGG 1 cut(s) 885
BmeRI GACNNNNNGTC 1 cut(s) 1707
BmeT110I CYCGRG 1 cut(s) 454
BmgT120I GGNCC 5 cut(s) 294, 655, 1069, 1437, 2218
BmiI GGNNCC 4 cut(s) 295, 1071, 2122, 2273
BmrFI CCNGG 1 cut(s) 885
BmrI ACTGGG 2 cut(s) 1478, 3042
BmsI GCATC 3 cut(s) 541, 1333, 2049
BmuI ACTGGG 2 cut(s) 1478, 3042
BpiI GAAGAC 1 cut(s) 1644
BplI GAGNNNNNCTC 2 cut(s) 556, 588
Bpu10I CCTNAGC 1 cut(s) 1461
BpuEI CTTGAG 6 cut(s) 469, 482, 558, 1388, 2187, 2580
Bsa29I ATCGAT 2 cut(s) 804, 2242
BsaHI GRCGYC 1 cut(s) 268
BsaI GGTCTC 2 cut(s) 866, 1124
BsaJI CCNNGG 3 cut(s) 651, 884, 2092
BsaXI ACNNNNNCTCC 2 cut(s) 742, 772
Bsc4I CCNNNNNNNGG 6 cut(s) 170, 578, 677, 2296, 2492, 2912
Bse118I RCCGGY 2 cut(s) 370, 1703
Bse1I ACTGG 4 cut(s) 323, 1473, 2007, 3037
Bse21I CCTNAGG 1 cut(s) 2019
Bse3DI GCAATG 5 cut(s) 351, 1409, 1917, 1917, 2749
BseBI CCWGG 1 cut(s) 885
BseCI ATCGAT 2 cut(s) 804, 2242
BseDI CCNNGG 3 cut(s) 651, 884, 2092
BseGI GGATG 6 cut(s) 640, 709, 1264, 1813, 2335, 2785
BseLI CCNNNNNNNGG 6 cut(s) 170, 578, 677, 2296, 2492, 2912
BseMI GCAATG 5 cut(s) 351, 1409, 1917, 1917, 2749
BseMII CTCAG 3 cut(s) 1452, 1923, 2033
BseNI ACTGG 4 cut(s) 323, 1473, 2007, 3037
BseRI GAGGAG 6 cut(s) 62, 164, 496, 1955, 2546, 2622
BseSI GKGCMC 1 cut(s) 1384
BsgI GTGCAG 1 cut(s) 1767
Bsh1236I CGCG 1 cut(s) 2819
Bsh1285I CGRYCG 2 cut(s) 168, 2542
BshFI GGCC 6 cut(s) 174, 296, 656, 1070, 1439, 2220
BshVI ATCGAT 2 cut(s) 804, 2242
BsiEI CGRYCG 2 cut(s) 168, 2542
BsiHKAI GWGCWC 4 cut(s) 455, 829, 2182, 2538
BsiHKCI CYCGRG 1 cut(s) 454
BsiSI CCGG 2 cut(s) 371, 1704
BsiWI CGTACG 1 cut(s) 2107
BslFI GGGAC 4 cut(s) 645, 1162, 2374, 2557
BslI CCNNNNNNNGG 6 cut(s) 170, 578, 677, 2296, 2492, 2912
BsmAI GTCTC 5 cut(s) 278, 866, 1124, 1509, 2486
BsmBI CGTCTC 1 cut(s) 278
BsmFI GGGAC 4 cut(s) 645, 1162, 2374, 2557
BsmI GAATGC 2 cut(s) 1203, 2953
BsnI GGCC 6 cut(s) 174, 296, 656, 1070, 1439, 2220
Bso31I GGTCTC 2 cut(s) 866, 1124
BsoBI CYCGRG 1 cut(s) 454
Bsp1286I GDGCHC 6 cut(s) 339, 455, 829, 1384, 2182, 2538
Bsp1407I TGTACA 1 cut(s) 1914
Bsp19I CCATGG 1 cut(s) 2092
BspANI GGCC 6 cut(s) 174, 296, 656, 1070, 1439, 2220
BspCNI CTCAG 3 cut(s) 1453, 1924, 2032
BspDI ATCGAT 2 cut(s) 804, 2242
BspFNI CGCG 1 cut(s) 2819
BspHI TCATGA 1 cut(s) 1270
BspLI GGNNCC 4 cut(s) 295, 1071, 2122, 2273
BspPI GGATC 5 cut(s) 1786, 2255, 2307, 2469, 2704
BspTNI GGTCTC 2 cut(s) 866, 1124
BsrDI GCAATG 5 cut(s) 351, 1409, 1917, 1917, 2749
BsrFI RCCGGY 2 cut(s) 370, 1703
BsrGI TGTACA 1 cut(s) 1914
BsrI ACTGG 4 cut(s) 323, 1473, 2007, 3037
BssAI RCCGGY 2 cut(s) 370, 1703
BssECI CCNNGG 3 cut(s) 651, 884, 2092
BssNAI GTATAC 1 cut(s) 2341
BssNI GRCGYC 1 cut(s) 268
BssT1I CCWWGG 1 cut(s) 2092
Bst1107I GTATAC 1 cut(s) 2341
Bst2UI CCWGG 1 cut(s) 885
Bst4CI ACNGT 9 cut(s) 302, 652, 1044, 1497, 1567, 1643, 2149, 2365, 2624
Bst6I CTCTTC 3 cut(s) 1851, 2636, 2667
BstACI GRCGYC 1 cut(s) 268
BstAUI TGTACA 1 cut(s) 1914
BstC8I GCNNGC 6 cut(s) 415, 587, 1406, 1836, 1962, 2546
BstDEI CTNAG 6 cut(s) 973, 1021, 1461, 1580, 1932, 2019
BstDSI CCRYGG 2 cut(s) 651, 2092
BstENI CCTNNNNNAGG 1 cut(s) 576
BstF5I GGATG 6 cut(s) 640, 709, 1264, 1813, 2335, 2785
BstFNI CGCG 1 cut(s) 2819
BstH2I RGCGCY 1 cut(s) 778
BstHHI GCGC 3 cut(s) 777, 1157, 2983
BstMAI GTCTC 5 cut(s) 278, 866, 1124, 1509, 2486
BstMCI CGRYCG 2 cut(s) 168, 2542
BstNI CCWGG 1 cut(s) 885
BstNSI RCATGY 1 cut(s) 1964
BstSCI CCNGG 1 cut(s) 883
BstSLI GKGCMC 1 cut(s) 1384
BstUI CGCG 1 cut(s) 2819
BstV2I GAAGAC 1 cut(s) 1644
BstX2I RGATCY 2 cut(s) 2461, 2696
BstYI RGATCY 2 cut(s) 2461, 2696
BstZ17I GTATAC 1 cut(s) 2341
Bsu15I ATCGAT 2 cut(s) 804, 2242
Bsu36I CCTNAGG 1 cut(s) 2019
BsuI GTATCC 2 cut(s) 2098, 2515
BsuRI GGCC 6 cut(s) 174, 296, 656, 1070, 1439, 2220
BsuTUI ATCGAT 2 cut(s) 804, 2242
BtgI CCRYGG 2 cut(s) 651, 2092
BtgZI GCGATG 1 cut(s) 1370
BtsCI GGATG 6 cut(s) 640, 709, 1264, 1813, 2335, 2785
BtsI GCAGTG 2 cut(s) 381, 1079
BtsIMutI CAGTG 6 cut(s) 307, 330, 381, 1079, 1122, 1648
Cac8I GCNNGC 6 cut(s) 415, 587, 1406, 1836, 1962, 2546
CciI TCATGA 1 cut(s) 1270
CfoI GCGC 3 cut(s) 777, 1157, 2983
Cfr10I RCCGGY 2 cut(s) 370, 1703
Cfr13I GGNCC 5 cut(s) 294, 655, 1069, 1437, 2218
ClaI ATCGAT 2 cut(s) 804, 2242
CseI GACGC 3 cut(s) 276, 1598, 2825
Csp6I GTAC 8 cut(s) 1187, 1344, 1850, 1915, 2108, 2280, 2446, 2563
CspCI CAANNNNNGTGG 4 cut(s) 633, 668, 1806, 1841
CviAII CATG 9 cut(s) 308, 505, 599, 985, 1271, 1894, 1961, 1974, 2093
CviQI GTAC 8 cut(s) 1187, 1344, 1850, 1915, 2108, 2280, 2446, 2563
DdeI CTNAG 6 cut(s) 973, 1021, 1461, 1580, 1932, 2019
DraI TTTAAA 1 cut(s) 2413
DriI GACNNNNNGTC 1 cut(s) 1707
Eam1104I CTCTTC 3 cut(s) 1851, 2636, 2667
Eam1105I GACNNNNNGTC 1 cut(s) 1707
EarI CTCTTC 3 cut(s) 1851, 2636, 2667
EciI GGCGGA 2 cut(s) 20, 2418
Ecl136II GAGCTC 2 cut(s) 453, 2180
Eco130I CCWWGG 1 cut(s) 2092
Eco24I GRGCYC 3 cut(s) 339, 455, 2182
Eco31I GGTCTC 2 cut(s) 866, 1124
Eco32I GATATC 1 cut(s) 1291
Eco47III AGCGCT 1 cut(s) 776
Eco53kI GAGCTC 2 cut(s) 453, 2180
Eco57I CTGAAG 6 cut(s) 249, 1163, 1175, 1445, 1817, 1863
Eco81I CCTNAGG 1 cut(s) 2019
Eco88I CYCGRG 1 cut(s) 454
EcoICRI GAGCTC 2 cut(s) 453, 2180
EcoNI CCTNNNNNAGG 1 cut(s) 576
EcoRII CCWGG 1 cut(s) 883
EcoRV GATATC 1 cut(s) 1291
EcoT14I CCWWGG 1 cut(s) 2092
EcoT38I GRGCYC 3 cut(s) 339, 455, 2182
ErhI CCWWGG 1 cut(s) 2092
Esp3I CGTCTC 1 cut(s) 278
FaeI CATG 9 cut(s) 311, 508, 602, 988, 1274, 1897, 1964, 1977, 2096
FalI AAGNNNNNCTT 4 cut(s) 607, 639, 1191, 1223
FaqI GGGAC 4 cut(s) 645, 1162, 2374, 2557
FatI CATG 9 cut(s) 307, 504, 598, 984, 1270, 1893, 1960, 1973, 2092
FauI CCCGC 4 cut(s) 127, 410, 1224, 2701
FauNDI CATATG 1 cut(s) 1295
FbaI TGATCA 2 cut(s) 304, 1810
FblI GTMKAC 2 cut(s) 265, 2340
FokI GGATG 6 cut(s) 647, 716, 1271, 1800, 2342, 2792
FriOI GRGCYC 3 cut(s) 339, 455, 2182
FspBI CTAG 6 cut(s) 402, 492, 830, 1341, 1853, 2084
GlaI GCGC 3 cut(s) 776, 1156, 2982
HaeII RGCGCY 1 cut(s) 778
HaeIII GGCC 6 cut(s) 174, 296, 656, 1070, 1439, 2220
HapII CCGG 2 cut(s) 371, 1704
HgaI GACGC 3 cut(s) 276, 1598, 2825
HhaI GCGC 3 cut(s) 777, 1157, 2983
Hin1I GRCGYC 1 cut(s) 268
Hin1II CATG 9 cut(s) 311, 508, 602, 988, 1274, 1897, 1964, 1977, 2096
Hin6I GCGC 3 cut(s) 775, 1155, 2981
HinP1I GCGC 3 cut(s) 775, 1155, 2981
HincII GTYRAC 2 cut(s) 1047, 1237
HindII GTYRAC 2 cut(s) 1047, 1237
HindIII AAGCTT 1 cut(s) 1728
HpaI GTTAAC 1 cut(s) 1237
HpaII CCGG 2 cut(s) 371, 1704
HphI GGTGA 7 cut(s) 166, 360, 707, 989, 1484, 2799, 2951
Hpy188I TCNGA 7 cut(s) 393, 787, 855, 1425, 1540, 2693, 2839
Hpy99I CGWCG 2 cut(s) 901, 1614
HpyCH4III ACNGT 9 cut(s) 302, 652, 1044, 1497, 1567, 1643, 2149, 2365, 2624
HpyCH4IV ACGT 2 cut(s) 342, 1588
HpyF3I CTNAG 6 cut(s) 973, 1021, 1461, 1580, 1932, 2019
HpySE526I ACGT 2 cut(s) 342, 1588
Hsp92I GRCGYC 1 cut(s) 268
Hsp92II CATG 9 cut(s) 311, 508, 602, 988, 1274, 1897, 1964, 1977, 2096
HspAI GCGC 3 cut(s) 775, 1155, 2981
Ksp22I TGATCA 2 cut(s) 304, 1810
KspAI GTTAAC 1 cut(s) 1237
LmnI GCTCC 5 cut(s) 1429, 2177, 2185, 2533, 2953
LweI GCATC 3 cut(s) 541, 1333, 2049
MaeI CTAG 6 cut(s) 402, 492, 830, 1341, 1853, 2084
MaeII ACGT 2 cut(s) 342, 1588
MaeIII GTNAC 4 cut(s) 722, 1643, 2096, 2865
MfeI CAATTG 1 cut(s) 474
MflI RGATCY 2 cut(s) 2461, 2696
MhlI GDGCHC 6 cut(s) 339, 455, 829, 1384, 2182, 2538
MluCI AATT 7 cut(s) 474, 1103, 1904, 2013, 2313, 2825, 2934
MlyI GAGTC 3 cut(s) 43, 1511, 2619
MroXI GAANNNNTTC 2 cut(s) 1731, 2439
MslI CAYNNNNRTG 2 cut(s) 918, 1275
MspA1I CMGCKG 3 cut(s) 1714, 1841, 2708
MspI CCGG 2 cut(s) 371, 1704
MspR9I CCNGG 1 cut(s) 885
MunI CAATTG 1 cut(s) 474
Mva1269I GAATGC 2 cut(s) 1203, 2953
MvaI CCWGG 1 cut(s) 885
MvnI CGCG 1 cut(s) 2819
NcoI CCATGG 1 cut(s) 2092
NdeI CATATG 1 cut(s) 1295
NlaIII CATG 9 cut(s) 311, 508, 602, 988, 1274, 1897, 1964, 1977, 2096
NlaIV GGNNCC 4 cut(s) 295, 1071, 2122, 2273
NmeAIII GCCGAG 1 cut(s) 588
NmuCI GTSAC 3 cut(s) 722, 1643, 2865
NspI RCATGY 1 cut(s) 1964
PaeI GCATGC 1 cut(s) 1964
PaeR7I CTCGAG 1 cut(s) 454
PagI TCATGA 1 cut(s) 1270
PcsI WCGNNNNNNNCGW 1 cut(s) 2308
PctI GAATGC 2 cut(s) 1203, 2953
PdmI GAANNNNTTC 2 cut(s) 1731, 2439
Pfl23II CGTACG 1 cut(s) 2107
PflFI GACNNNGTC 1 cut(s) 270
PflMI CCANNNNNTGG 1 cut(s) 2296
Ple19I CGATCG 2 cut(s) 168, 2542
PleI GAGTC 3 cut(s) 42, 1510, 2618
PpsI GAGTC 3 cut(s) 42, 1510, 2618
PshBI ATTAAT 1 cut(s) 2348
Psp124BI GAGCTC 2 cut(s) 455, 2182
Psp1406I AACGTT 1 cut(s) 342
Psp6I CCWGG 1 cut(s) 883
PspGI CCWGG 1 cut(s) 883
PspLI CGTACG 1 cut(s) 2107
PspN4I GGNNCC 4 cut(s) 295, 1071, 2122, 2273
PspPI GGNCC 5 cut(s) 294, 655, 1069, 1437, 2218
PspXI VCTCGAGB 1 cut(s) 454
PsuI RGATCY 2 cut(s) 2461, 2696
PsyI GACNNNGTC 1 cut(s) 270
PvuI CGATCG 2 cut(s) 168, 2542
PvuII CAGCTG 1 cut(s) 1841
RsaI GTAC 8 cut(s) 1188, 1345, 1851, 1916, 2109, 2281, 2447, 2564
RsaNI GTAC 8 cut(s) 1187, 1344, 1850, 1915, 2108, 2280, 2446, 2563
RseI CAYNNNNRTG 2 cut(s) 918, 1275
SacI GAGCTC 2 cut(s) 455, 2182
Sau96I GGNCC 5 cut(s) 294, 655, 1069, 1437, 2218
ScaI AGTACT 1 cut(s) 2564
SchI GAGTC 3 cut(s) 43, 1511, 2619
ScrFI CCNGG 1 cut(s) 885
SduI GDGCHC 6 cut(s) 339, 455, 829, 1384, 2182, 2538
SfaNI GCATC 3 cut(s) 541, 1333, 2049
Sfr274I CTCGAG 1 cut(s) 454
SlaI CTCGAG 1 cut(s) 454
SmiMI CAYNNNNRTG 2 cut(s) 918, 1275
SmlI CTYRAG 7 cut(s) 448, 454, 461, 573, 1367, 2202, 2595
SmoI CTYRAG 7 cut(s) 448, 454, 461, 573, 1367, 2202, 2595
SpeI ACTAGT 2 cut(s) 401, 2083
SphI GCATGC 1 cut(s) 1964
Sse9I AATT 7 cut(s) 474, 1103, 1904, 2013, 2313, 2825, 2934
SspMI CTAG 6 cut(s) 402, 492, 830, 1341, 1853, 2084
SstI GAGCTC 2 cut(s) 455, 2182
StyD4I CCNGG 1 cut(s) 883
StyI CCWWGG 1 cut(s) 2092
TaaI ACNGT 9 cut(s) 302, 652, 1044, 1497, 1567, 1643, 2149, 2365, 2624
TaiI ACGT 2 cut(s) 345, 1591
TaqI TCGA 8 cut(s) 168, 455, 804, 2053, 2242, 2311, 2580, 3006
TasI AATT 7 cut(s) 474, 1103, 1904, 2013, 2313, 2825, 2934
TatI WGTACW 6 cut(s) 1186, 1343, 1849, 1914, 2279, 2562
TauI GCSGC 3 cut(s) 21, 125, 1404
TscAI CASTG 6 cut(s) 307, 330, 381, 1086, 1129, 1648
TseFI GTSAC 3 cut(s) 722, 1643, 2865
Tsp45I GTSAC 3 cut(s) 722, 1643, 2865
TspGWI ACGGA 1 cut(s) 1764
TspRI CASTG 6 cut(s) 307, 330, 381, 1086, 1129, 1648
Tth111I GACNNNGTC 1 cut(s) 270
Van91I CCANNNNNTGG 1 cut(s) 2296
VspI ATTAAT 1 cut(s) 2348
XagI CCTNNNNNAGG 1 cut(s) 576
XceI RCATGY 1 cut(s) 1964
XcmI CCANNNNNNNNNTGG 2 cut(s) 920, 2171
XhoI CTCGAG 1 cut(s) 454
XmiI GTMKAC 2 cut(s) 265, 2340
XmnI GAANNNNTTC 2 cut(s) 1731, 2439
XspI CTAG 6 cut(s) 402, 492, 830, 1341, 1853, 2084
ZrmI AGTACT 1 cut(s) 2564
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.