pycom15g20860

acyl-activating enzyme 1

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
14959148 .. 14963852
4705 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1635 bp
ATGAATAAGGCTAGTCTTGTCCAGTGCTCCGCAAACTACATACCCTTGTCGCCTATAAGCTTCTTAGAGCGAGCTGCTGTTGTCCATGGCGATAAGATTTCGATCGTTTACGGGGGAGTGAGATTTTCATGGCAGCAGACGCTTGTAAGATGTCTCAAGGTCGCCTCAGCTTTCGTCCACTTAGGCATATCTCGCCATGATGTTGTTGCAGCTTTTGCACCAAACATCCCAGCACTCTATGAGTTACATTTCAGCATTCCAATGGCAGGAGCAGTCCTTTGTGCACTTAACATTAGGCTGCACGCACCCGCATTAGCTTCGATATTACAACAATTGGAAGCCAAAGCCATTCTTGTAGATCATCAGTACCTTGAAGTTGTCCTCCAAGCACTTGACATTTTGTCCCAATCAAACTCCAACTCCAAGCCACCTCTCCTCATTCTAATCCCAGAATGTGACCAATCATCATCATCTTCCCATAGTGATCTTGATCTTCCATCAGGTGCCCTAAATTACAATGACCTACAGGAATCAGCAGAACCCGGTTTTCAGATTCTCAGACCCAACAATGAGTGTGACCCGATTTCAGTGAGTTACACTTCAGGGTCAACAGGTAATCCCAAAGGAGTTGTGTACAGCCACAGAGCTGTGTACCTGAATTCACTGGGAGCAATTTTTCAGAGTGACATGAGAAAAATGCCTGTTTTTCTATGGACGGTCGAAATGTTTCGGTGCAATGGGTGGTGCTTCCCTTGGGCTGTTGCTGCTCTTGGTGGCACCAATATCTGCCTAAGAAGTGTCTCAGCCAAAGCCATTTTTGAAGCAATTGATCTTCACAAGGTAACACACTTATGTGGTGCACCCTCTATATTAAACATTCTAGCAGATGCCTCAGAAAATGGTCAAACTAGGGTTACAAAATCAAGGGTGGAGATTATTGTTGCTGGTGCATTGCCAGCACCGGAGATTCTGATCAAGGTTACAGAATTAGGGTTTAATGTGAGCCATGGATATGGCATGACCGAGGCTCTTGGTCCGGCAATTGTCACACCATGCAAACCCAAGTTGGAATCTCAGTACAATCTAATGATGGAAGGTGTTGATGTGAAGGATCTGACTAGTATGGAGAGTGTGCCATATGATGGAAAAACAATGGGGGAGATTGTGTTAAGAGGCAACACTTTGATGTTGGGATATCTGAAAAACTCAAACCCTAATCATGAAGTTTTCAAGGGCGGATGGTATAGGACTGGTGATCTGGCAGTTCGGCATTCAGATGGATACATTCAGATGAAAGATAGGGCAAGGGACATTATAATTTCTGGTGGGGAGTCTATAAGCTCACTTGAGGTGGAGGCAGTTTTGCTAACTCATCCACAAGTTTTGGAGGCTGCTGTTGTGGGGAAACATGATGAGGTTTTGGGGGAGACACCTTGTGCTTTTGTGAAGTTGAAGGAGGGTTTTGGTGATGGTGGTGAAGAAAGTTGTAAAGAGATTGTGAGGTTTTGTGAGGAGAAATTGCCTGTTTTTATGGTTCCACAAGCTTTCGTGTTTGGGGATTTGCCTAATTCTACTGGGAGGGTACAAAAGTTTGTTCTAAAGAAGAAGGCCAATCTTGTGGGAAGCCAAGAATAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

545

Amino Acids

59.1

Weight (kDa)

5.95

Isoelectric Point (pI)

37.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AMP-binding PF00501 22 - 400 4.3e-64 AMP-binding enzyme
AMP-binding_C PF13193 450 - 522 8.4e-17 AMP-binding enzyme C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1316
AccB1I GGYRCC 2 cut(s) 503, 776
AccB7I CCANNNNNTGG 1 cut(s) 1142
AciI CCGC 3 cut(s) 30, 309, 1236
AclWI GGATC 1 cut(s) 1119
AcsI RAATTY 1 cut(s) 658
AcuI CTGAAG 1 cut(s) 585
AdeI CACNNNGTG 1 cut(s) 1436
AfaI GTAC 5 cut(s) 368, 635, 653, 1079, 1584
AfiI CCNNNNNNNGG 2 cut(s) 266, 1142
AgsI TTSAA 4 cut(s) 374, 821, 1231, 1453
AhdI GACNNNNNGTC 1 cut(s) 400
AhlI ACTAGT 1 cut(s) 1118
AleI CACNNNNGTG 1 cut(s) 852
AluBI AGCT 8 cut(s) 60, 74, 170, 212, 317, 647, 1341, 1544
AluI AGCT 8 cut(s) 60, 74, 170, 212, 317, 647, 1341, 1544
Alw21I GWGCWC 3 cut(s) 29, 286, 862
Alw26I GTCTC 3 cut(s) 158, 805, 1421
Alw44I GTGCAC 2 cut(s) 282, 858
AlwI GGATC 1 cut(s) 1119
AoxI GGCC 1 cut(s) 1608
ApaLI GTGCAC 2 cut(s) 282, 858
ApeKI GCWGC 6 cut(s) 74, 133, 209, 298, 764, 1391
ApoI RAATTY 1 cut(s) 658
Asp700I GAANNNNTTC 1 cut(s) 726
AspS9I GGNCC 1 cut(s) 1034
AsuC2I CCSGG 1 cut(s) 543
AsuHPI GGTGA 3 cut(s) 1265, 1478, 1487
AvaII GGWCC 1 cut(s) 1034
BaeGI GKGCMC 3 cut(s) 286, 508, 862
BaeI ACNNNNGTAYC 2 cut(s) 1574, 1607
BanI GGYRCC 2 cut(s) 503, 776
Bbv12I GWGCWC 3 cut(s) 29, 286, 862
BbvCI CCTCAGC 1 cut(s) 166
BbvI GCAGC 6 cut(s) 61, 145, 221, 285, 751, 1378
BccI CCATC 6 cut(s) 505, 1084, 1136, 1233, 1271, 1463
BcgI CGANNNNNNTGC 2 cut(s) 300, 334
BciVI GTATCC 1 cut(s) 1274
BclI TGATCA 1 cut(s) 972
BcnI CCSGG 1 cut(s) 543
BcoDI GTCTC 3 cut(s) 158, 805, 1421
BcuI ACTAGT 1 cut(s) 1118
BfaI CTAG 4 cut(s) 12, 881, 909, 1119
BfmI CTRYAG 1 cut(s) 524
BfuI GTATCC 1 cut(s) 1274
BisI GCNGC 6 cut(s) 75, 134, 210, 299, 765, 1392
BlsI GCNGC 6 cut(s) 76, 135, 211, 300, 766, 1393
Bme1390I CCNGG 1 cut(s) 543
Bme18I GGWCC 1 cut(s) 1034
BmeRI GACNNNNNGTC 1 cut(s) 400
BmgT120I GGNCC 1 cut(s) 1034
BmiI GGNNCC 3 cut(s) 505, 778, 1536
BmrFI CCNGG 1 cut(s) 543
BmrI ACTGGG 2 cut(s) 674, 1584
BmsI GCATC 1 cut(s) 877
BmuI ACTGGG 2 cut(s) 674, 1584
Bpu10I CCTNAGC 1 cut(s) 166
BpuEI CTTGAG 2 cut(s) 140, 1367
BpuMI CCSGG 1 cut(s) 543
BsaBI GATNNNNATC 3 cut(s) 101, 489, 971
BsaJI CCNNGG 4 cut(s) 85, 752, 1006, 1023
BsaWI WCCGGW 1 cut(s) 961
BsaXI ACNNNNNCTCC 4 cut(s) 404, 434, 1151, 1181
Bsc4I CCNNNNNNNGG 2 cut(s) 266, 1142
Bse1I ACTGG 4 cut(s) 22, 669, 1255, 1579
Bse3DI GCAATG 2 cut(s) 742, 950
Bse8I GATNNNNATC 3 cut(s) 101, 489, 971
BseDI CCNNGG 4 cut(s) 85, 752, 1006, 1023
BseGI GGATG 3 cut(s) 225, 1244, 1372
BseJI GATNNNNATC 3 cut(s) 101, 489, 971
BseLI CCNNNNNNNGG 2 cut(s) 266, 1142
BseMI GCAATG 2 cut(s) 742, 950
BseMII CTCAG 5 cut(s) 180, 571, 816, 906, 1088
BseNI ACTGG 4 cut(s) 22, 669, 1255, 1579
BseRI GAGGAG 2 cut(s) 425, 1526
BseSI GKGCMC 3 cut(s) 286, 508, 862
BseXI GCAGC 6 cut(s) 61, 145, 221, 285, 751, 1378
BseYI CCCAGC 1 cut(s) 229
BsgI GTGCAG 1 cut(s) 284
Bsh1285I CGRYCG 2 cut(s) 105, 720
BshFI GGCC 1 cut(s) 1610
BshNI GGYRCC 2 cut(s) 503, 776
BsiEI CGRYCG 2 cut(s) 105, 720
BsiHKAI GWGCWC 3 cut(s) 29, 286, 862
BsiSI CCGG 3 cut(s) 543, 962, 1037
BslFI GGGAC 2 cut(s) 388, 1322
BslI CCNNNNNNNGG 2 cut(s) 266, 1142
BsmAI GTCTC 3 cut(s) 158, 805, 1421
BsmFI GGGAC 2 cut(s) 388, 1322
BsmI GAATGC 2 cut(s) 255, 1270
BsnI GGCC 1 cut(s) 1610
Bsp1286I GDGCHC 4 cut(s) 29, 286, 508, 862
Bsp1407I TGTACA 1 cut(s) 633
Bsp143I GATC 8 cut(s) 102, 358, 484, 490, 829, 972, 1111, 1255
Bsp19I CCATGG 2 cut(s) 85, 1006
BspACI CCGC 3 cut(s) 30, 309, 1236
BspANI GGCC 1 cut(s) 1610
BspCNI CTCAG 5 cut(s) 179, 570, 815, 905, 1087
BspHI TCATGA 1 cut(s) 1219
BspLI GGNNCC 3 cut(s) 505, 778, 1536
BspPI GGATC 1 cut(s) 1119
BspT107I GGYRCC 2 cut(s) 503, 776
BsrDI GCAATG 2 cut(s) 742, 950
BsrGI TGTACA 1 cut(s) 633
BsrI ACTGG 4 cut(s) 22, 669, 1255, 1579
BssECI CCNNGG 4 cut(s) 85, 752, 1006, 1023
BssMI GATC 8 cut(s) 102, 358, 484, 490, 829, 972, 1111, 1255
BssT1I CCWWGG 3 cut(s) 85, 752, 1006
Bst4CI ACNGT 1 cut(s) 718
BstAPI GCANNNNNTGC 1 cut(s) 215
BstAUI TGTACA 1 cut(s) 633
BstC8I GCNNGC 3 cut(s) 72, 303, 957
BstDEI CTNAG 8 cut(s) 64, 166, 181, 557, 791, 802, 892, 1074
BstDSI CCRYGG 2 cut(s) 85, 1006
BstF5I GGATG 3 cut(s) 225, 1244, 1372
BstKTI GATC 8 cut(s) 105, 361, 487, 493, 832, 975, 1114, 1258
BstMAI GTCTC 3 cut(s) 158, 805, 1421
BstMBI GATC 8 cut(s) 102, 358, 484, 490, 829, 972, 1111, 1255
BstMCI CGRYCG 2 cut(s) 105, 720
BstMWI GCNNNNNNNGC 5 cut(s) 139, 192, 215, 764, 956
BstSCI CCNGG 1 cut(s) 541
BstSFI CTRYAG 1 cut(s) 524
BstSLI GKGCMC 3 cut(s) 286, 508, 862
BstV1I GCAGC 6 cut(s) 61, 145, 221, 285, 751, 1378
BstX2I RGATCY 1 cut(s) 1111
BstXI CCANNNNNNTGG 2 cut(s) 1013, 1618
BstYI RGATCY 1 cut(s) 1111
BsuI GTATCC 1 cut(s) 1274
BsuRI GGCC 1 cut(s) 1610
BtgI CCRYGG 2 cut(s) 85, 1006
BtsCI GGATG 3 cut(s) 225, 1244, 1372
BtsIMutI CAGTG 3 cut(s) 29, 594, 662
Cac8I GCNNGC 3 cut(s) 72, 303, 957
CciI TCATGA 1 cut(s) 1219
Cfr13I GGNCC 1 cut(s) 1034
CseI GACGC 1 cut(s) 148
Csp6I GTAC 5 cut(s) 367, 634, 652, 1078, 1583
CspCI CAANNNNNGTGG 2 cut(s) 1365, 1400
CviAII CATG 9 cut(s) 86, 129, 197, 688, 1007, 1018, 1053, 1220, 1409
CviQI GTAC 5 cut(s) 367, 634, 652, 1078, 1583
DdeI CTNAG 8 cut(s) 64, 166, 181, 557, 791, 802, 892, 1074
DpnI GATC 8 cut(s) 104, 360, 486, 492, 831, 974, 1113, 1257
DpnII GATC 8 cut(s) 102, 358, 484, 490, 829, 972, 1111, 1255
DraIII CACNNNGTG 1 cut(s) 1436
DriI GACNNNNNGTC 1 cut(s) 400
Eam1105I GACNNNNNGTC 1 cut(s) 400
EciI GGCGGA 1 cut(s) 1251
Eco130I CCWWGG 3 cut(s) 85, 752, 1006
Eco32I GATATC 1 cut(s) 1196
Eco47I GGWCC 1 cut(s) 1034
Eco57I CTGAAG 1 cut(s) 585
EcoRI GAATTC 1 cut(s) 658
EcoRV GATATC 1 cut(s) 1196
EcoT14I CCWWGG 3 cut(s) 85, 752, 1006
ErhI CCWWGG 3 cut(s) 85, 752, 1006
FaeI CATG 9 cut(s) 89, 132, 200, 691, 1010, 1021, 1056, 1223, 1412
FalI AAGNNNNNCTT 2 cut(s) 336, 368
FaqI GGGAC 2 cut(s) 388, 1322
FatI CATG 9 cut(s) 85, 128, 196, 687, 1006, 1017, 1052, 1219, 1408
FauI CCCGC 1 cut(s) 316
FauNDI CATATG 1 cut(s) 1138
FbaI TGATCA 1 cut(s) 972
Fnu4HI GCNGC 6 cut(s) 75, 134, 210, 299, 765, 1392
FokI GGATG 3 cut(s) 212, 1251, 1359
Fsp4HI GCNGC 6 cut(s) 75, 134, 210, 299, 765, 1392
FspBI CTAG 4 cut(s) 12, 881, 909, 1119
GluI GCNGC 6 cut(s) 75, 134, 210, 299, 765, 1392
GsaI CCCAGC 1 cut(s) 233
HaeIII GGCC 1 cut(s) 1610
HapII CCGG 3 cut(s) 543, 962, 1037
HgaI GACGC 1 cut(s) 148
Hin1II CATG 9 cut(s) 89, 132, 200, 691, 1010, 1021, 1056, 1223, 1412
HincII GTYRAC 1 cut(s) 609
HindII GTYRAC 1 cut(s) 609
HindIII AAGCTT 2 cut(s) 58, 1542
HinfI GANTC 5 cut(s) 530, 553, 967, 1070, 1331
HpaII CCGG 3 cut(s) 543, 962, 1037
HphI GGTGA 3 cut(s) 1265, 1478, 1487
Hpy166II GTNNAC 7 cut(s) 109, 178, 284, 609, 634, 652, 860
Hpy188I TCNGA 9 cut(s) 552, 560, 681, 895, 972, 1116, 1200, 1276, 1290
Hpy188III TCNNGA 2 cut(s) 488, 1220
Hpy8I GTNNAC 7 cut(s) 109, 178, 284, 609, 634, 652, 860
HpyAV CCTTC 4 cut(s) 1088, 1102, 1447, 1600
HpyCH4III ACNGT 1 cut(s) 718
HpyCH4V TGCA 8 cut(s) 209, 218, 284, 301, 735, 860, 950, 1056
HpyF10VI GCNNNNNNNGC 5 cut(s) 139, 192, 215, 764, 956
HpyF3I CTNAG 8 cut(s) 64, 166, 181, 557, 791, 802, 892, 1074
Hsp92II CATG 9 cut(s) 89, 132, 200, 691, 1010, 1021, 1056, 1223, 1412
Ksp22I TGATCA 1 cut(s) 972
Kzo9I GATC 8 cut(s) 102, 358, 484, 490, 829, 972, 1111, 1255
LmnI GCTCC 3 cut(s) 32, 269, 668
Lsp1109I GCAGC 6 cut(s) 61, 145, 221, 285, 751, 1378
LweI GCATC 1 cut(s) 877
MaeI CTAG 4 cut(s) 12, 881, 909, 1119
MaeIII GTNAC 9 cut(s) 243, 455, 575, 593, 683, 841, 913, 979, 1045
MalI GATC 8 cut(s) 104, 360, 486, 492, 831, 974, 1113, 1257
MboI GATC 8 cut(s) 102, 358, 484, 490, 829, 972, 1111, 1255
MboII GAAGA 5 cut(s) 465, 485, 824, 1490, 1615
MfeI CAATTG 3 cut(s) 332, 825, 1041
MflI RGATCY 1 cut(s) 1111
MhlI GDGCHC 4 cut(s) 29, 286, 508, 862
MlyI GAGTC 1 cut(s) 1340
MmeI TCCRAC 2 cut(s) 441, 1047
MroXI GAANNNNTTC 1 cut(s) 726
MseI TTAA 4 cut(s) 288, 872, 996, 1169
MslI CAYNNNNRTG 7 cut(s) 260, 850, 852, 1011, 1184, 1275, 1289
MspI CCGG 3 cut(s) 543, 962, 1037
MspR9I CCNGG 1 cut(s) 543
MunI CAATTG 3 cut(s) 332, 825, 1041
Mva1269I GAATGC 2 cut(s) 255, 1270
MwoI GCNNNNNNNGC 5 cut(s) 139, 192, 215, 764, 956
NciI CCSGG 1 cut(s) 543
NcoI CCATGG 2 cut(s) 85, 1006
NdeI CATATG 1 cut(s) 1138
NdeII GATC 8 cut(s) 102, 358, 484, 490, 829, 972, 1111, 1255
NlaIII CATG 9 cut(s) 89, 132, 200, 691, 1010, 1021, 1056, 1223, 1412
NlaIV GGNNCC 3 cut(s) 505, 778, 1536
NmuCI GTSAC 4 cut(s) 455, 575, 683, 1045
OliI CACNNNNGTG 1 cut(s) 852
PagI TCATGA 1 cut(s) 1219
PctI GAATGC 2 cut(s) 255, 1270
PdmI GAANNNNTTC 1 cut(s) 726
PfeI GAWTC 4 cut(s) 530, 553, 967, 1070
PflMI CCANNNNNTGG 1 cut(s) 1142
PkrI GCNGC 6 cut(s) 76, 135, 211, 300, 766, 1393
Ple19I CGATCG 1 cut(s) 105
PleI GAGTC 1 cut(s) 1339
PpsI GAGTC 1 cut(s) 1339
PsiI TTATAA 1 cut(s) 1316
PspFI CCCAGC 1 cut(s) 229
PspN4I GGNNCC 3 cut(s) 505, 778, 1536
PspPI GGNCC 1 cut(s) 1034
PsuI RGATCY 1 cut(s) 1111
PvuI CGATCG 1 cut(s) 105
RsaI GTAC 5 cut(s) 368, 635, 653, 1079, 1584
RsaNI GTAC 5 cut(s) 367, 634, 652, 1078, 1583
RseI CAYNNNNRTG 7 cut(s) 260, 850, 852, 1011, 1184, 1275, 1289
SaqAI TTAA 4 cut(s) 288, 872, 996, 1169
SatI GCNGC 6 cut(s) 75, 134, 210, 299, 765, 1392
Sau3AI GATC 8 cut(s) 102, 358, 484, 490, 829, 972, 1111, 1255
Sau96I GGNCC 1 cut(s) 1034
SchI GAGTC 1 cut(s) 1340
ScrFI CCNGG 1 cut(s) 543
SduI GDGCHC 4 cut(s) 29, 286, 508, 862
SfaNI GCATC 1 cut(s) 877
SfcI CTRYAG 1 cut(s) 524
SinI GGWCC 1 cut(s) 1034
SmiMI CAYNNNNRTG 7 cut(s) 260, 850, 852, 1011, 1184, 1275, 1289
SmlI CTYRAG 2 cut(s) 155, 1346
SmoI CTYRAG 2 cut(s) 155, 1346
SpeI ACTAGT 1 cut(s) 1118
SsiI CCGC 3 cut(s) 30, 309, 1236
SspMI CTAG 4 cut(s) 12, 881, 909, 1119
StyD4I CCNGG 1 cut(s) 541
StyI CCWWGG 3 cut(s) 85, 752, 1006
TaaI ACNGT 1 cut(s) 718
TaqI TCGA 3 cut(s) 101, 320, 720
TaqII GACCGA 1 cut(s) 1037
TatI WGTACW 2 cut(s) 633, 1077
TfiI GAWTC 4 cut(s) 530, 553, 967, 1070
Tru1I TTAA 4 cut(s) 288, 872, 996, 1169
Tru9I TTAA 4 cut(s) 288, 872, 996, 1169
TscAI CASTG 3 cut(s) 29, 594, 669
TseFI GTSAC 4 cut(s) 455, 575, 683, 1045
TseI GCWGC 6 cut(s) 74, 133, 209, 298, 764, 1391
Tsp45I GTSAC 4 cut(s) 455, 575, 683, 1045
TspDTI ATGAA 4 cut(s) 17, 117, 1236, 1307
TspRI CASTG 3 cut(s) 29, 594, 669
Van91I CCANNNNNTGG 1 cut(s) 1142
VneI GTGCAC 2 cut(s) 282, 858
VpaK11BI GGWCC 1 cut(s) 1034
XapI RAATTY 1 cut(s) 658
XmnI GAANNNNTTC 1 cut(s) 726
XspI CTAG 4 cut(s) 12, 881, 909, 1119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.