No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g10580 FvH4_1g10581 FvH4_1g10590 |
| malus_domestica | MD02G1120100.v1.1 MD15G1234100.v1.1 |
| prunus_persica | Prupe.7G178600_v2.0.a1 |
| pyrus_communis | pycom02g09360 pycom06g03660 pycom15g20860 |
| rosa_chinensis | RchiOBHm_Chr1g0343831 RchiOBHm_Chr2g0097661 RchiOBHm_Chr5g0081661 |
| rosa_laevigata | RLG00000016733 |
| rosa_multiflora | Rmu_co8398949.1_g000001 Rmu_sc0003567.1_g000016 Rmu_sc0019235.1_g000003 Rmu_sc0022221.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00144620 Rroxscaffold_3G00234410 |
| rosa_rugosa | Rorug02G0068200 Rorug02G0253400 Rorug06G0115300 |
| rosa_samantha | Rh2AG114700 Rh2BG117500 Rh2CG119500 Rh2DG118400 Rh4BG080100 Rh6BG186300 Rh6DG148000 |
| rosa_wichuraiana | Rw0G011160 Rw2G008970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 5 |
| AjnI | CCWGG | 1 cut(s) | 137 |
| Alw21I | GWGCWC | 1 cut(s) | 153 |
| AoxI | GGCC | 1 cut(s) | 121 |
| Bbv12I | GWGCWC | 1 cut(s) | 153 |
| BccI | CCATC | 1 cut(s) | 52 |
| BciT130I | CCWGG | 1 cut(s) | 139 |
| Bme1390I | CCNGG | 1 cut(s) | 139 |
| BmiI | GGNNCC | 1 cut(s) | 9 |
| BmrFI | CCNGG | 1 cut(s) | 139 |
| BpmI | CTGGAG | 1 cut(s) | 160 |
| Bsa29I | ATCGAT | 1 cut(s) | 47 |
| BsaJI | CCNNGG | 3 cut(s) | 118, 137, 157 |
| BseBI | CCWGG | 1 cut(s) | 139 |
| BseCI | ATCGAT | 1 cut(s) | 47 |
| BseDI | CCNNGG | 3 cut(s) | 118, 137, 157 |
| BseGI | GGATG | 1 cut(s) | 35 |
| BseMII | CTCAG | 1 cut(s) | 54 |
| BseRI | GAGGAG | 1 cut(s) | 157 |
| BseYI | CCCAGC | 1 cut(s) | 71 |
| BshFI | GGCC | 1 cut(s) | 123 |
| BshVI | ATCGAT | 1 cut(s) | 47 |
| BsiHKAI | GWGCWC | 1 cut(s) | 153 |
| BsnI | GGCC | 1 cut(s) | 123 |
| Bsp1286I | GDGCHC | 1 cut(s) | 153 |
| Bsp143I | GATC | 2 cut(s) | 53, 109 |
| Bsp19I | CCATGG | 1 cut(s) | 157 |
| BspACI | CCGC | 1 cut(s) | 5 |
| BspANI | GGCC | 1 cut(s) | 123 |
| BspCNI | CTCAG | 1 cut(s) | 55 |
| BspDI | ATCGAT | 1 cut(s) | 47 |
| BspLI | GGNNCC | 1 cut(s) | 9 |
| BssECI | CCNNGG | 3 cut(s) | 118, 137, 157 |
| BssMI | GATC | 2 cut(s) | 53, 109 |
| BssT1I | CCWWGG | 1 cut(s) | 157 |
| Bst2UI | CCWGG | 1 cut(s) | 139 |
| Bst4CI | ACNGT | 1 cut(s) | 119 |
| BstC8I | GCNNGC | 1 cut(s) | 23 |
| BstDEI | CTNAG | 1 cut(s) | 63 |
| BstDSI | CCRYGG | 2 cut(s) | 118, 157 |
| BstF5I | GGATG | 1 cut(s) | 35 |
| BstKTI | GATC | 2 cut(s) | 56, 112 |
| BstMBI | GATC | 2 cut(s) | 53, 109 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 68 |
| BstNI | CCWGG | 1 cut(s) | 139 |
| BstSCI | CCNGG | 1 cut(s) | 137 |
| Bsu15I | ATCGAT | 1 cut(s) | 47 |
| BsuRI | GGCC | 1 cut(s) | 123 |
| BsuTUI | ATCGAT | 1 cut(s) | 47 |
| BtgI | CCRYGG | 2 cut(s) | 118, 157 |
| BtsCI | GGATG | 1 cut(s) | 35 |
| Cac8I | GCNNGC | 1 cut(s) | 23 |
| ClaI | ATCGAT | 1 cut(s) | 47 |
| CseI | GACGC | 1 cut(s) | 21 |
| CviAII | CATG | 2 cut(s) | 86, 158 |
| CviJI | RGCY | 4 cut(s) | 10, 71, 123, 162 |
| CviKI_1 | RGCY | 4 cut(s) | 10, 71, 123, 162 |
| DdeI | CTNAG | 1 cut(s) | 63 |
| DpnI | GATC | 2 cut(s) | 55, 111 |
| DpnII | GATC | 2 cut(s) | 53, 109 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| Eco130I | CCWWGG | 1 cut(s) | 157 |
| EcoRII | CCWGG | 1 cut(s) | 137 |
| EcoT14I | CCWWGG | 1 cut(s) | 157 |
| ErhI | CCWWGG | 1 cut(s) | 157 |
| FaeI | CATG | 2 cut(s) | 89, 161 |
| FaiI | YATR | 4 cut(s) | 19, 87, 132, 159 |
| FatI | CATG | 2 cut(s) | 85, 157 |
| FokI | GGATG | 1 cut(s) | 22 |
| GsaI | CCCAGC | 1 cut(s) | 75 |
| GsuI | CTGGAG | 1 cut(s) | 160 |
| HaeIII | GGCC | 1 cut(s) | 123 |
| HgaI | GACGC | 1 cut(s) | 21 |
| Hin1II | CATG | 2 cut(s) | 89, 161 |
| HpyAV | CCTTC | 2 cut(s) | 61, 74 |
| HpyCH4III | ACNGT | 1 cut(s) | 119 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 68 |
| HpyF3I | CTNAG | 1 cut(s) | 63 |
| Hsp92II | CATG | 2 cut(s) | 89, 161 |
| Kzo9I | GATC | 2 cut(s) | 53, 109 |
| LmnI | GCTCC | 1 cut(s) | 7 |
| LpnPI | CCDG | 4 cut(s) | 57, 115, 124, 151 |
| MalI | GATC | 2 cut(s) | 55, 111 |
| MboI | GATC | 2 cut(s) | 53, 109 |
| MhlI | GDGCHC | 1 cut(s) | 153 |
| MmeI | TCCRAC | 1 cut(s) | 63 |
| MnlI | CCTC | 3 cut(s) | 21, 134, 135 |
| MslI | CAYNNNNRTG | 1 cut(s) | 156 |
| MspR9I | CCNGG | 1 cut(s) | 139 |
| MvaI | CCWGG | 1 cut(s) | 139 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 68 |
| NcoI | CCATGG | 1 cut(s) | 157 |
| NdeII | GATC | 2 cut(s) | 53, 109 |
| NlaIII | CATG | 2 cut(s) | 89, 161 |
| NlaIV | GGNNCC | 1 cut(s) | 9 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 29 |
| Psp6I | CCWGG | 1 cut(s) | 137 |
| PspFI | CCCAGC | 1 cut(s) | 71 |
| PspGI | CCWGG | 1 cut(s) | 137 |
| PspN4I | GGNNCC | 1 cut(s) | 9 |
| RseI | CAYNNNNRTG | 1 cut(s) | 156 |
| Sau3AI | GATC | 2 cut(s) | 53, 109 |
| ScrFI | CCNGG | 1 cut(s) | 139 |
| SduI | GDGCHC | 1 cut(s) | 153 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 156 |
| SsiI | CCGC | 1 cut(s) | 5 |
| StyD4I | CCNGG | 1 cut(s) | 137 |
| StyI | CCWWGG | 1 cut(s) | 157 |
| TaaI | ACNGT | 1 cut(s) | 119 |
| TaqI | TCGA | 1 cut(s) | 47 |